Rh5DG246800

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
28217385 .. 28219611
2227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG246800.1

Sequence Viewer

Length: 1212 bp
ATGGCAGTGAGCTTTTTAAGGCACGAGGTATCTGACCTCTGTCTGGGCAAGCCGGCTCTGAGGTCTCTCTCCATCTCGGCCACCGTTGCCGATGCCGTTGAGGCCTTGAGGATCTCGGAAGACAATTTCATCAGCGTCTGGGATTGCAACCATCACTCCAAGAGTCTCGCCGGAGACCAGTGCCGGTGTGTTGGGAAGTTGTGCATGGTCGATGTGATTTGCTATCTTTCCAAAGACGACAACTTGTCGTCTCTATCTGCTGCGCTGAAGGCACCGGTGTCTGAAATCTTGACAAAGATTCCGGGAACTGTTATGCACGTTGACCCATCTTGCAGCTTATTGCAAGCCATTGATCTAATTCTCCAAGGAAACCAGAACCTGGTGGTACCAATTCAGAGCAGGCAAAGCGGCACTTCAAGAAGAAAACAGTTCCCAAAATCCACAAATTACATGACCACAACAACCAATCACAACGGTCAAGAATTTTGCTGGCTAACACAGGAAGACGTAATCCGATTCCTTCTGAGCTCAATTGGGGTCTTCTCTCCCATGCCTGCTCTCTCTATCGACTCTCTTGGGATCATCAACACCACAGACATCTTGGCCATCAACTACCACTCTCCGGCAAGCTCGGCGGTCCAGCTCATATCTCAGTCACTCGAGCAGCAAACCTCAGTGGCTGTTGTGGACATTGATGATGTGTTGATCGGTGAGATCTCGCCTTTCACTCTGGCCTGCTGTGACGAGTCGGTGGCTGCAGCCATCGCCACTCTGTCTTGTGGAGAGCTCATGGACTACATTGACTGTGGAGGACCACCTGAGCACTTGATCAAGATTGTGACAGAGAGATTGAAGGAGAGGAAGTTACAAGGAGCTTTGGAAAATTACTCATCAGCAACTAATGCTTCTGCAAATTTAGGGTCGTCGTCTTCTTCTTCATCAGATGAGGAGTCGTCTGGATCTCTAAATAGTACCAAACTCAGGTCTGCGGGAAGATTTAGTAGGTCAAATAGCTACTCGGCTAGAATGGTGAGGAGGTCTGAGGCCATAGTTTGTCATCCGAAGAGTTCGTTAGTGGCTGTGATGATTCAGGCAATTGCTCATAGAGTGAACTATGTCTGGGTTATTGAGGATGACTATAACTTGGTGGGTATTGTCACTTTTTCTGGCATGTTAGAGGTTTTCCGGGAACACTTGGAGACCATGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

403

Amino Acids

43.7

Weight (kDa)

5.3

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 385
AccB1I GGYRCC 2 cut(s) 271, 385
AccB7I CCANNNNNTGG 1 cut(s) 379
AciI CCGC 3 cut(s) 408, 635, 989
AclWI GGATC 3 cut(s) 119, 587, 967
AcoI YGGCCR 2 cut(s) 78, 603
AcsI RAATTY 2 cut(s) 482, 913
AcuI CTGAAG 1 cut(s) 287
AfaI GTAC 2 cut(s) 387, 973
AfiI CCNNNNNNNGG 4 cut(s) 43, 379, 622, 981
AgeI ACCGGT 1 cut(s) 274
AgsI TTSAA 2 cut(s) 417, 853
AhdI GACNNNNNGTC 1 cut(s) 244
AjnI CCWGG 1 cut(s) 378
AluBI AGCT 8 cut(s) 12, 336, 528, 630, 643, 787, 875, 1014
AluI AGCT 8 cut(s) 12, 336, 528, 630, 643, 787, 875, 1014
Alw21I GWGCWC 3 cut(s) 530, 789, 825
Alw26I GTCTC 5 cut(s) 69, 168, 170, 255, 1193
AlwI GGATC 3 cut(s) 119, 587, 967
AlwNI CAGNNNCTG 3 cut(s) 138, 379, 680
Ama87I CYCGRG 1 cut(s) 659
AoxI GGCC 5 cut(s) 78, 102, 603, 732, 1044
ApeKI GCWGC 5 cut(s) 260, 333, 664, 755, 758
ApoI RAATTY 2 cut(s) 482, 913
ArsI GACNNNNNNTTYG 2 cut(s) 905, 937
AsiGI ACCGGT 1 cut(s) 274
Asp718I GGTACC 1 cut(s) 385
AspLEI GCGC 1 cut(s) 265
AspS9I GGNCC 2 cut(s) 637, 812
AsuC2I CCSGG 2 cut(s) 303, 1187
AsuHPI GGTGA 2 cut(s) 722, 1042
AvaI CYCGRG 1 cut(s) 659
AvaII GGWCC 2 cut(s) 637, 812
BalI TGGCCA 1 cut(s) 605
BanI GGYRCC 2 cut(s) 271, 385
BanII GRGCYC 2 cut(s) 530, 789
BauI CACGAG 1 cut(s) 23
BbsI GAAGAC 4 cut(s) 126, 510, 532, 921
Bbv12I GWGCWC 3 cut(s) 530, 789, 825
BbvI GCAGC 5 cut(s) 247, 345, 676, 742, 770
BccI CCATC 5 cut(s) 80, 159, 334, 614, 770
BceAI ACGGC 1 cut(s) 80
BciT130I CCWGG 1 cut(s) 380
BclI TGATCA 1 cut(s) 828
BcnI CCSGG 2 cut(s) 303, 1187
BcoDI GTCTC 5 cut(s) 69, 168, 170, 255, 1193
BfaI CTAG 2 cut(s) 1023, 1210
BfmI CTRYAG 1 cut(s) 756
BglI GCCNNNNNGGC 1 cut(s) 101
BglII AGATCT 1 cut(s) 714
BisI GCNGC 6 cut(s) 261, 334, 409, 665, 756, 759
BlsI GCNGC 6 cut(s) 262, 335, 410, 666, 757, 760
Bme1390I CCNGG 3 cut(s) 303, 380, 1187
Bme18I GGWCC 2 cut(s) 637, 812
BmeRI GACNNNNNGTC 1 cut(s) 244
BmeT110I CYCGRG 1 cut(s) 659
BmgT120I GGNCC 2 cut(s) 637, 812
BmiI GGNNCC 2 cut(s) 273, 387
BmrFI CCNGG 3 cut(s) 303, 380, 1187
BmsI GCATC 1 cut(s) 82
BoxI GACNNNNGTC 1 cut(s) 39
BpiI GAAGAC 4 cut(s) 126, 510, 532, 921
Bpu10I CCTNAGC 1 cut(s) 819
BpuEI CTTGAG 1 cut(s) 127
BpuMI CCSGG 2 cut(s) 303, 1187
BsaI GGTCTC 3 cut(s) 69, 168, 1193
BsaJI CCNNGG 1 cut(s) 364
BsaWI WCCGGW 1 cut(s) 274
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 848, 878
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 379, 622, 981
Bse118I RCCGGY 3 cut(s) 52, 183, 274
Bse1I ACTGG 1 cut(s) 178
BseBI CCWGG 1 cut(s) 380
BseDI CCNNGG 1 cut(s) 364
BseGI GGATG 2 cut(s) 1057, 1138
BseLI CCNNNNNNNGG 4 cut(s) 43, 379, 622, 981
BseMII CTCAG 7 cut(s) 50, 515, 665, 687, 810, 994, 1032
BseNI ACTGG 1 cut(s) 178
BseRI GAGGAG 2 cut(s) 962, 1048
BseXI GCAGC 5 cut(s) 247, 345, 676, 742, 770
BshFI GGCC 5 cut(s) 80, 104, 605, 734, 1046
BshNI GGYRCC 2 cut(s) 271, 385
BshTI ACCGGT 1 cut(s) 274
BsiHKAI GWGCWC 3 cut(s) 530, 789, 825
BsiHKCI CYCGRG 1 cut(s) 659
BsiSI CCGG 7 cut(s) 53, 171, 184, 275, 302, 623, 1186
BslI CCNNNNNNNGG 4 cut(s) 43, 379, 622, 981
BsmAI GTCTC 5 cut(s) 69, 168, 170, 255, 1193
BsmBI CGTCTC 1 cut(s) 255
BsnI GGCC 5 cut(s) 80, 104, 605, 734, 1046
Bso31I GGTCTC 3 cut(s) 69, 168, 1193
BsoBI CYCGRG 1 cut(s) 659
Bsp1286I GDGCHC 3 cut(s) 530, 789, 825
Bsp143I GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
BspACI CCGC 3 cut(s) 408, 635, 989
BspANI GGCC 5 cut(s) 80, 104, 605, 734, 1046
BspCNI CTCAG 7 cut(s) 51, 516, 664, 686, 811, 993, 1033
BspLI GGNNCC 2 cut(s) 273, 387
BspMAI CTGCAG 1 cut(s) 760
BspPI GGATC 3 cut(s) 119, 587, 967
BspT107I GGYRCC 2 cut(s) 271, 385
BspTNI GGTCTC 3 cut(s) 69, 168, 1193
BsrFI RCCGGY 3 cut(s) 52, 183, 274
BsrI ACTGG 1 cut(s) 178
BssAI RCCGGY 3 cut(s) 52, 183, 274
BssECI CCNNGG 1 cut(s) 364
BssMI GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
BssSI CACGAG 1 cut(s) 23
BssT1I CCWWGG 1 cut(s) 364
Bst2BI CACGAG 1 cut(s) 23
Bst2UI CCWGG 1 cut(s) 380
Bst4CI ACNGT 5 cut(s) 85, 310, 429, 476, 806
Bst6I CTCTTC 1 cut(s) 1058
BstAPI GCANNNNNTGC 1 cut(s) 902
BstC8I GCNNGC 8 cut(s) 50, 54, 345, 401, 491, 555, 628, 736
BstDEI CTNAG 7 cut(s) 59, 524, 651, 673, 819, 980, 1041
BstF5I GGATG 2 cut(s) 1057, 1138
BstHHI GCGC 1 cut(s) 265
BstKTI GATC 8 cut(s) 114, 355, 582, 708, 717, 831, 962, 1209
BstMAI GTCTC 5 cut(s) 69, 168, 170, 255, 1193
BstMBI GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
BstMWI GCNNNNNNNGC 7 cut(s) 86, 101, 269, 405, 632, 764, 902
BstNI CCWGG 1 cut(s) 380
BstNSI RCATGY 1 cut(s) 1174
BstPAI GACNNNNGTC 1 cut(s) 39
BstSCI CCNGG 3 cut(s) 301, 378, 1185
BstSFI CTRYAG 1 cut(s) 756
BstV1I GCAGC 5 cut(s) 247, 345, 676, 742, 770
BstV2I GAAGAC 4 cut(s) 126, 510, 532, 921
BstX2I RGATCY 3 cut(s) 111, 714, 959
BstYI RGATCY 3 cut(s) 111, 714, 959
BsuRI GGCC 5 cut(s) 80, 104, 605, 734, 1046
BtgZI GCGATG 1 cut(s) 748
BtsCI GGATG 2 cut(s) 1057, 1138
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 3 cut(s) 12, 185, 681
Cac8I GCNNGC 8 cut(s) 50, 54, 345, 401, 491, 555, 628, 736
CaiI CAGNNNCTG 3 cut(s) 138, 379, 680
CfoI GCGC 1 cut(s) 265
Cfr10I RCCGGY 3 cut(s) 52, 183, 274
Cfr13I GGNCC 2 cut(s) 637, 812
CseI GACGC 1 cut(s) 124
CsiI ACCWGGT 1 cut(s) 378
Csp6I GTAC 2 cut(s) 386, 972
CspAI ACCGGT 1 cut(s) 274
CviAII CATG 6 cut(s) 205, 451, 550, 790, 1171, 1204
CviQI GTAC 2 cut(s) 386, 972
DdeI CTNAG 7 cut(s) 59, 524, 651, 673, 819, 980, 1041
DpnI GATC 8 cut(s) 113, 354, 581, 707, 716, 830, 961, 1208
DpnII GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
DriI GACNNNNNGTC 1 cut(s) 244
EaeI YGGCCR 2 cut(s) 78, 603
Eam1104I CTCTTC 1 cut(s) 1058
Eam1105I GACNNNNNGTC 1 cut(s) 244
EarI CTCTTC 1 cut(s) 1058
Ecl136II GAGCTC 2 cut(s) 528, 787
Eco130I CCWWGG 1 cut(s) 364
Eco147I AGGCCT 1 cut(s) 104
Eco24I GRGCYC 2 cut(s) 530, 789
Eco31I GGTCTC 3 cut(s) 69, 168, 1193
Eco47I GGWCC 2 cut(s) 637, 812
Eco53kI GAGCTC 2 cut(s) 528, 787
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 1 cut(s) 659
EcoICRI GAGCTC 2 cut(s) 528, 787
EcoRII CCWGG 1 cut(s) 378
EcoT14I CCWWGG 1 cut(s) 364
EcoT38I GRGCYC 2 cut(s) 530, 789
ErhI CCWWGG 1 cut(s) 364
Esp3I CGTCTC 1 cut(s) 255
FaeI CATG 6 cut(s) 208, 454, 553, 793, 1174, 1207
FalI AAGNNNNNCTT 2 cut(s) 397, 429
FatI CATG 6 cut(s) 204, 450, 549, 789, 1170, 1203
FauI CCCGC 1 cut(s) 982
FbaI TGATCA 1 cut(s) 828
Fnu4HI GCNGC 6 cut(s) 261, 334, 409, 665, 756, 759
FokI GGATG 2 cut(s) 1044, 1145
FriOI GRGCYC 2 cut(s) 530, 789
Fsp4HI GCNGC 6 cut(s) 261, 334, 409, 665, 756, 759
FspBI CTAG 2 cut(s) 1023, 1210
GlaI GCGC 1 cut(s) 264
GluI GCNGC 6 cut(s) 261, 334, 409, 665, 756, 759
HaeIII GGCC 5 cut(s) 80, 104, 605, 734, 1046
HapII CCGG 7 cut(s) 53, 171, 184, 275, 302, 623, 1186
HgaI GACGC 1 cut(s) 124
HhaI GCGC 1 cut(s) 265
Hin1II CATG 6 cut(s) 208, 454, 553, 793, 1174, 1207
Hin6I GCGC 1 cut(s) 263
HinP1I GCGC 1 cut(s) 263
HincII GTYRAC 1 cut(s) 322
HindII GTYRAC 1 cut(s) 322
HinfI GANTC 7 cut(s) 163, 298, 516, 569, 746, 950, 1087
HpaII CCGG 7 cut(s) 53, 171, 184, 275, 302, 623, 1186
HphI GGTGA 2 cut(s) 722, 1042
Hpy166II GTNNAC 3 cut(s) 322, 688, 1111
Hpy188III TCNNGA 5 cut(s) 289, 417, 479, 832, 957
Hpy8I GTNNAC 3 cut(s) 322, 688, 1111
Hpy99I CGWCG 1 cut(s) 928
HpyAV CCTTC 3 cut(s) 262, 530, 847
HpyCH4III ACNGT 5 cut(s) 85, 310, 429, 476, 806
HpyCH4IV ACGT 2 cut(s) 318, 507
HpyCH4V TGCA 7 cut(s) 147, 204, 316, 333, 343, 758, 911
HpyF10VI GCNNNNNNNGC 7 cut(s) 86, 101, 269, 405, 632, 764, 902
HpyF3I CTNAG 7 cut(s) 59, 524, 651, 673, 819, 980, 1041
HpySE526I ACGT 2 cut(s) 318, 507
Hsp92II CATG 6 cut(s) 208, 454, 553, 793, 1174, 1207
HspAI GCGC 1 cut(s) 263
KpnI GGTACC 1 cut(s) 389
KroI GCCGGC 1 cut(s) 52
KroNI GCCGGC 1 cut(s) 54
Ksp22I TGATCA 1 cut(s) 828
Kzo9I GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
LmnI GCTCC 1 cut(s) 872
Lsp1109I GCAGC 5 cut(s) 247, 345, 676, 742, 770
LweI GCATC 1 cut(s) 82
MabI ACCWGGT 1 cut(s) 378
MaeI CTAG 2 cut(s) 1023, 1210
MaeII ACGT 2 cut(s) 318, 507
MaeIII GTNAC 5 cut(s) 654, 740, 838, 864, 1156
MalI GATC 8 cut(s) 113, 354, 581, 707, 716, 830, 961, 1208
MboI GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
MboII GAAGA 9 cut(s) 131, 432, 515, 532, 921, 924, 927, 1005, 1075
MfeI CAATTG 2 cut(s) 531, 1095
MflI RGATCY 3 cut(s) 111, 714, 959
MhlI GDGCHC 3 cut(s) 530, 789, 825
MlsI TGGCCA 1 cut(s) 605
MluCI AATT 9 cut(s) 124, 357, 390, 445, 482, 531, 883, 913, 1095
MluNI TGGCCA 1 cut(s) 605
MlyI GAGTC 4 cut(s) 172, 563, 755, 959
Mox20I TGGCCA 1 cut(s) 605
MroNI GCCGGC 1 cut(s) 52
MscI TGGCCA 1 cut(s) 605
MseI TTAA 1 cut(s) 17
Msp20I TGGCCA 1 cut(s) 605
MspI CCGG 7 cut(s) 53, 171, 184, 275, 302, 623, 1186
MspR9I CCNGG 3 cut(s) 303, 380, 1187
MunI CAATTG 2 cut(s) 531, 1095
MvaI CCWGG 1 cut(s) 380
MwoI GCNNNNNNNGC 7 cut(s) 86, 101, 269, 405, 632, 764, 902
NaeI GCCGGC 1 cut(s) 54
NciI CCSGG 2 cut(s) 303, 1187
NdeII GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
NgoMIV GCCGGC 1 cut(s) 52
NlaIII CATG 6 cut(s) 208, 454, 553, 793, 1174, 1207
NlaIV GGNNCC 2 cut(s) 273, 387
NmeAIII GCCGAG 3 cut(s) 56, 611, 998
NmuCI GTSAC 4 cut(s) 654, 740, 838, 1156
NspI RCATGY 1 cut(s) 1174
PaeR7I CTCGAG 1 cut(s) 659
PceI AGGCCT 1 cut(s) 104
PdiI GCCGGC 1 cut(s) 54
PfeI GAWTC 3 cut(s) 298, 516, 1087
PflMI CCANNNNNTGG 1 cut(s) 379
PfoI TCCNGGA 2 cut(s) 301, 1185
PinAI ACCGGT 1 cut(s) 274
PkrI GCNGC 6 cut(s) 262, 335, 410, 666, 757, 760
PleI GAGTC 4 cut(s) 171, 563, 754, 958
PpsI GAGTC 4 cut(s) 171, 563, 754, 958
PshAI GACNNNNGTC 1 cut(s) 39
Psp124BI GAGCTC 2 cut(s) 530, 789
Psp6I CCWGG 1 cut(s) 378
PspGI CCWGG 1 cut(s) 378
PspN4I GGNNCC 2 cut(s) 273, 387
PspPI GGNCC 2 cut(s) 637, 812
PspXI VCTCGAGB 1 cut(s) 659
PstI CTGCAG 1 cut(s) 760
PstNI CAGNNNCTG 3 cut(s) 138, 379, 680
PsuI RGATCY 3 cut(s) 111, 714, 959
RsaI GTAC 2 cut(s) 387, 973
RsaNI GTAC 2 cut(s) 386, 972
SacI GAGCTC 2 cut(s) 530, 789
SaqAI TTAA 1 cut(s) 17
SatI GCNGC 6 cut(s) 261, 334, 409, 665, 756, 759
Sau3AI GATC 8 cut(s) 111, 352, 579, 705, 714, 828, 959, 1206
Sau96I GGNCC 2 cut(s) 637, 812
SchI GAGTC 4 cut(s) 172, 563, 755, 959
ScrFI CCNGG 3 cut(s) 303, 380, 1187
SduI GDGCHC 3 cut(s) 530, 789, 825
SexAI ACCWGGT 1 cut(s) 378
SfaNI GCATC 1 cut(s) 82
SfcI CTRYAG 1 cut(s) 756
Sfr274I CTCGAG 1 cut(s) 659
SgrAI CRCCGGYG 1 cut(s) 274
SinI GGWCC 2 cut(s) 637, 812
SlaI CTCGAG 1 cut(s) 659
SmlI CTYRAG 2 cut(s) 106, 659
SmoI CTYRAG 2 cut(s) 106, 659
Sse9I AATT 9 cut(s) 124, 357, 390, 445, 482, 531, 883, 913, 1095
SseBI AGGCCT 1 cut(s) 104
SsiI CCGC 3 cut(s) 408, 635, 989
SspMI CTAG 2 cut(s) 1023, 1210
SstI GAGCTC 2 cut(s) 530, 789
StuI AGGCCT 1 cut(s) 104
StyD4I CCNGG 3 cut(s) 301, 378, 1185
StyI CCWWGG 1 cut(s) 364
TaaI ACNGT 5 cut(s) 85, 310, 429, 476, 806
TaiI ACGT 2 cut(s) 321, 510
TaqI TCGA 3 cut(s) 210, 567, 660
TasI AATT 9 cut(s) 124, 357, 390, 445, 482, 531, 883, 913, 1095
TauI GCSGC 1 cut(s) 411
TfiI GAWTC 3 cut(s) 298, 516, 1087
Tru1I TTAA 1 cut(s) 17
Tru9I TTAA 1 cut(s) 17
TscAI CASTG 3 cut(s) 12, 185, 681
TseFI GTSAC 4 cut(s) 654, 740, 838, 1156
TseI GCWGC 5 cut(s) 260, 333, 664, 755, 758
Tsp45I GTSAC 4 cut(s) 654, 740, 838, 1156
TspDTI ATGAA 2 cut(s) 118, 927
TspRI CASTG 3 cut(s) 12, 185, 681
Van91I CCANNNNNTGG 1 cut(s) 379
VpaK11BI GGWCC 2 cut(s) 637, 812
XapI RAATTY 2 cut(s) 482, 913
XceI RCATGY 1 cut(s) 1174
XcmI CCANNNNNNNNNTGG 1 cut(s) 598
XhoI CTCGAG 1 cut(s) 659
XspI CTAG 2 cut(s) 1023, 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.