Rh6CG244900

CBS domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0003827
Physical Location & Seq
Reverse (-)
41208110 .. 41210153
2044 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG244900.1

Sequence Viewer

Length: 1209 bp
ATGGCAGTGAGCTTCTTGAGGCACGAGGTATCCGACCTCTGTCTAGCCAAGCCGGCTCTGAGGTCCCTCTCCGTCTCCTCCACCGTCGCCGATGCCTTAGAGGCCCTCAAAACCTCCGAAGAAAACTTCCTCAGCATTTGGGATTGCAACCACCACTCCAAAACCCTCGCCGGCGATCAGTGCCGCTGCGTCGGGAAGGTCTGCATGGTCGATGTGATTTGCTACCTTTCCCAAGATGCCAACCTCGTGTCTCCCTCCGCTGCTCTCAAGGCACCCGTCTCTGAAATCATGACAGAGACTGCAGGAACCGTGATGCACGTAGAGCCTTCTTGCAGCTTACTAAAAGCCATTGATCTAATGCTCCAAGGAATCCAGAACTTGGTGGTACCAATCCAAACCAGGCTAAGCAGCAACTCGAGAAGAAAGCAACACCCAAAACTCATCAACAGCACCACAAGCACCATCCACAACGGACAAGAGTTCTGCTGGCTCACACAGGAAGACGTAGTCCGGTTCCTCCTCAACTCTATTGGGGTCTTCTCGCCCCTTCCTGCTCTCTCAATCGACTCACTCGGCCTCATCAACACCGCTGACATCTTGGCCATCAACTACCACTCCCCGGCTGACTCCGCCGTCCAGCTCATAACTCAGTCGCTGACACAACAAACCTCAGTGGCGGTTGTGGACATTGATGGTGTGTTAATCGGCGAGATCTCGCCTTTTACTCTTTCTAGCTGTGATGAGTCGGTGGCTGCAGCCATCGCCACTCTGTCATGCGGAGAGCTCATGGCCTACATTGACTGTGGAGGACCCCCTGAGTACTTGATCAAGATTGTGACTGAGAGACTCAAACAGAGAAAGTTACAAGGAGCTTTAGAGAGTTACTCATCAAGTACTTCAAGTTCCAATTCACCAATGTTTTCTTCTTCTTCTTCATCAGATGAGGAGTCCTCAGTATATCCAAGAAGCACCAGAATGGTGAGGTCTGGGAGGTTCAGCAAGTCTAATAGCTACTCAGCTAGGATGGTGAGGAGGGCTGAGGCTATAGTGTGTCATCCCAAGAGCTCATTGGTGGCTGTGATGATTCAGGCAATTGCTCACAGAGTGAACTATGTTTGGGTTATTGAGGATGATTGCAGCCTTGTGGGGATTGTCACTTTTTCTGGGATGTTAAAGGTTTTCAGGGAGCATTTGGAAACCATGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBS

Protein Analysis

402

Amino Acids

43.58

Weight (kDa)

5.82

Isoelectric Point (pI)

52.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 632
Acc65I GGTACC 1 cut(s) 385
AccB1I GGYRCC 2 cut(s) 271, 385
AccB7I CCANNNNNTGG 1 cut(s) 379
AciI CCGC 6 cut(s) 184, 258, 588, 630, 677, 777
AcoI YGGCCR 1 cut(s) 600
AdeI CACNNNGTG 1 cut(s) 1105
AfaI GTAC 3 cut(s) 387, 821, 895
AfiI CCNNNNNNNGG 2 cut(s) 379, 619
AgsI TTSAA 1 cut(s) 900
AjnI CCWGG 1 cut(s) 398
AjuI GAANNNNNNNTTGG 2 cut(s) 907, 939
AluBI AGCT 9 cut(s) 12, 336, 640, 735, 784, 872, 1011, 1019, 1065
AluI AGCT 9 cut(s) 12, 336, 640, 735, 784, 872, 1011, 1019, 1065
Alw21I GWGCWC 2 cut(s) 786, 1067
Alw26I GTCTC 5 cut(s) 79, 255, 283, 290, 838
AlwNI CAGNNNCTG 2 cut(s) 299, 655
Ama87I CYCGRG 1 cut(s) 415
AoxI GGCC 4 cut(s) 102, 574, 600, 789
ApeKI GCWGC 7 cut(s) 186, 260, 333, 408, 752, 755, 1137
Asp718I GGTACC 1 cut(s) 385
AspS9I GGNCC 3 cut(s) 63, 103, 809
AsuC2I CCSGG 1 cut(s) 620
AsuHPI GGTGA 3 cut(s) 903, 991, 1039
AvaI CYCGRG 1 cut(s) 415
AvaII GGWCC 2 cut(s) 63, 809
BalI TGGCCA 1 cut(s) 602
BanI GGYRCC 2 cut(s) 271, 385
BanII GRGCYC 2 cut(s) 786, 1067
BauI CACGAG 2 cut(s) 23, 245
BbsI GAAGAC 2 cut(s) 507, 529
Bbv12I GWGCWC 2 cut(s) 786, 1067
BbvCI CCTCAGC 2 cut(s) 131, 1038
BbvI GCAGC 7 cut(s) 173, 247, 345, 420, 739, 767, 1149
BccI CCATC 5 cut(s) 470, 611, 686, 767, 1018
BceAI ACGGC 1 cut(s) 617
BciT130I CCWGG 1 cut(s) 400
BciVI GTATCC 1 cut(s) 40
BclI TGATCA 1 cut(s) 825
BcnI CCSGG 1 cut(s) 620
BcoDI GTCTC 5 cut(s) 79, 255, 283, 290, 838
BfaI CTAG 4 cut(s) 44, 732, 1020, 1207
BfmI CTRYAG 3 cut(s) 300, 753, 1044
BfuI GTATCC 1 cut(s) 40
BglI GCCNNNNNGGC 2 cut(s) 53, 101
BglII AGATCT 1 cut(s) 711
BisI GCNGC 8 cut(s) 184, 187, 261, 334, 409, 753, 756, 1138
BlpI GCTNAGC 1 cut(s) 404
BlsI GCNGC 8 cut(s) 185, 188, 262, 335, 410, 754, 757, 1139
BmcAI AGTACT 2 cut(s) 821, 895
Bme1390I CCNGG 2 cut(s) 400, 620
Bme18I GGWCC 2 cut(s) 63, 809
BmeT110I CYCGRG 1 cut(s) 415
BmgT120I GGNCC 3 cut(s) 63, 103, 809
BmiI GGNNCC 6 cut(s) 65, 273, 307, 387, 515, 811
BmrFI CCNGG 2 cut(s) 400, 620
BmsI GCATC 3 cut(s) 82, 226, 303
BoxI GACNNNNGTC 1 cut(s) 39
BpiI GAAGAC 2 cut(s) 507, 529
BplI GAGNNNNNCTC 4 cut(s) 869, 901, 935, 967
Bpu10I CCTNAGC 2 cut(s) 131, 1038
Bpu1102I GCTNAGC 1 cut(s) 404
BpuEI CTTGAG 2 cut(s) 37, 251
BpuMI CCSGG 1 cut(s) 620
BsaAI YACGTR 1 cut(s) 319
BsaJI CCNNGG 3 cut(s) 364, 618, 1200
BsaWI WCCGGW 1 cut(s) 510
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 599, 629
Bsc4I CCNNNNNNNGG 2 cut(s) 379, 619
Bse118I RCCGGY 2 cut(s) 52, 170
BseBI CCWGG 1 cut(s) 400
BseDI CCNNGG 3 cut(s) 364, 618, 1200
BseGI GGATG 5 cut(s) 462, 1029, 1054, 1135, 1173
BseLI CCNNNNNNNGG 2 cut(s) 379, 619
BseMII CTCAG 9 cut(s) 50, 145, 662, 684, 807, 831, 966, 1029, 1029
BseRI GAGGAG 4 cut(s) 67, 509, 959, 1045
BseXI GCAGC 7 cut(s) 173, 247, 345, 420, 739, 767, 1149
BshFI GGCC 4 cut(s) 104, 576, 602, 791
BshNI GGYRCC 2 cut(s) 271, 385
BsiHKAI GWGCWC 2 cut(s) 786, 1067
BsiHKCI CYCGRG 1 cut(s) 415
BsiSI CCGG 4 cut(s) 53, 171, 511, 620
BslFI GGGAC 1 cut(s) 49
BslI CCNNNNNNNGG 2 cut(s) 379, 619
BsmAI GTCTC 5 cut(s) 79, 255, 283, 290, 838
BsmBI CGTCTC 2 cut(s) 79, 283
BsmFI GGGAC 1 cut(s) 49
BsnI GGCC 4 cut(s) 104, 576, 602, 791
BsoBI CYCGRG 1 cut(s) 415
Bsp1286I GDGCHC 2 cut(s) 786, 1067
Bsp143I GATC 4 cut(s) 175, 352, 711, 825
Bsp1720I GCTNAGC 1 cut(s) 404
Bsp19I CCATGG 1 cut(s) 1200
BspACI CCGC 6 cut(s) 184, 258, 588, 630, 677, 777
BspANI GGCC 4 cut(s) 104, 576, 602, 791
BspCNI CTCAG 9 cut(s) 51, 144, 661, 683, 808, 832, 965, 1028, 1030
BspHI TCATGA 1 cut(s) 288
BspLI GGNNCC 6 cut(s) 65, 273, 307, 387, 515, 811
BspMAI CTGCAG 2 cut(s) 304, 757
BspT107I GGYRCC 2 cut(s) 271, 385
BsrFI RCCGGY 2 cut(s) 52, 170
BssAI RCCGGY 2 cut(s) 52, 170
BssECI CCNNGG 3 cut(s) 364, 618, 1200
BssMI GATC 4 cut(s) 175, 352, 711, 825
BssSI CACGAG 2 cut(s) 23, 245
BssT1I CCWWGG 2 cut(s) 364, 1200
Bst2BI CACGAG 2 cut(s) 23, 245
Bst2UI CCWGG 1 cut(s) 400
Bst4CI ACNGT 3 cut(s) 85, 310, 803
BstBAI YACGTR 1 cut(s) 319
BstC8I GCNNGC 3 cut(s) 54, 172, 488
BstDSI CCRYGG 1 cut(s) 1200
BstF5I GGATG 5 cut(s) 462, 1029, 1054, 1135, 1173
BstKTI GATC 4 cut(s) 178, 355, 714, 828
BstMAI GTCTC 5 cut(s) 79, 255, 283, 290, 838
BstMBI GATC 4 cut(s) 175, 352, 711, 825
BstMWI GCNNNNNNNGC 8 cut(s) 53, 101, 180, 269, 322, 456, 629, 761
BstNI CCWGG 1 cut(s) 400
BstPAI GACNNNNGTC 1 cut(s) 39
BstSCI CCNGG 2 cut(s) 398, 618
BstSFI CTRYAG 3 cut(s) 300, 753, 1044
BstV1I GCAGC 7 cut(s) 173, 247, 345, 420, 739, 767, 1149
BstV2I GAAGAC 2 cut(s) 507, 529
BstX2I RGATCY 1 cut(s) 711
BstYI RGATCY 1 cut(s) 711
BsuI GTATCC 1 cut(s) 40
BsuRI GGCC 4 cut(s) 104, 576, 602, 791
BtgI CCRYGG 1 cut(s) 1200
BtgZI GCGATG 1 cut(s) 745
BtsCI GGATG 5 cut(s) 462, 1029, 1054, 1135, 1173
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 3 cut(s) 12, 185, 678
Cac8I GCNNGC 3 cut(s) 54, 172, 488
CaiI CAGNNNCTG 2 cut(s) 299, 655
CciI TCATGA 1 cut(s) 288
Cfr10I RCCGGY 2 cut(s) 52, 170
Cfr13I GGNCC 3 cut(s) 63, 103, 809
CseI GACGC 1 cut(s) 178
Csp6I GTAC 3 cut(s) 386, 820, 894
CviAII CATG 5 cut(s) 205, 289, 774, 787, 1201
CviQI GTAC 3 cut(s) 386, 820, 894
DpnI GATC 4 cut(s) 177, 354, 713, 827
DpnII GATC 4 cut(s) 175, 352, 711, 825
DraIII CACNNNGTG 1 cut(s) 1105
DrdI GACNNNNNNGTC 1 cut(s) 632
DseDI GACNNNNNNGTC 1 cut(s) 632
EaeI YGGCCR 1 cut(s) 600
EciI GGCGGA 1 cut(s) 619
Ecl136II GAGCTC 2 cut(s) 784, 1065
Eco130I CCWWGG 2 cut(s) 364, 1200
Eco24I GRGCYC 2 cut(s) 786, 1067
Eco47I GGWCC 2 cut(s) 63, 809
Eco53kI GAGCTC 2 cut(s) 784, 1065
Eco88I CYCGRG 1 cut(s) 415
EcoICRI GAGCTC 2 cut(s) 784, 1065
EcoO109I RGGNCCY 3 cut(s) 63, 103, 809
EcoRII CCWGG 1 cut(s) 398
EcoT14I CCWWGG 2 cut(s) 364, 1200
EcoT38I GRGCYC 2 cut(s) 786, 1067
ErhI CCWWGG 2 cut(s) 364, 1200
Esp3I CGTCTC 2 cut(s) 79, 283
FaeI CATG 5 cut(s) 208, 292, 777, 790, 1204
FaiI YATR 9 cut(s) 206, 290, 644, 775, 788, 958, 1046, 1113, 1202
FaqI GGGAC 1 cut(s) 49
FatI CATG 5 cut(s) 204, 288, 773, 786, 1200
FbaI TGATCA 1 cut(s) 825
Fnu4HI GCNGC 8 cut(s) 184, 187, 261, 334, 409, 753, 756, 1138
FokI GGATG 5 cut(s) 449, 1036, 1041, 1142, 1180
FriOI GRGCYC 2 cut(s) 786, 1067
Fsp4HI GCNGC 8 cut(s) 184, 187, 261, 334, 409, 753, 756, 1138
FspBI CTAG 4 cut(s) 44, 732, 1020, 1207
GluI GCNGC 8 cut(s) 184, 187, 261, 334, 409, 753, 756, 1138
HaeIII GGCC 4 cut(s) 104, 576, 602, 791
HapII CCGG 4 cut(s) 53, 171, 511, 620
HgaI GACGC 1 cut(s) 178
Hin1II CATG 5 cut(s) 208, 292, 777, 790, 1204
HinfI GANTC 7 cut(s) 369, 566, 626, 743, 846, 947, 1084
HpaII CCGG 4 cut(s) 53, 171, 511, 620
HphI GGTGA 3 cut(s) 903, 991, 1039
Hpy166II GTNNAC 2 cut(s) 685, 1108
Hpy188I TCNGA 5 cut(s) 34, 60, 118, 283, 940
Hpy188III TCNNGA 6 cut(s) 16, 193, 289, 373, 417, 829
Hpy8I GTNNAC 2 cut(s) 685, 1108
Hpy99I CGWCG 2 cut(s) 89, 194
HpyAV CCTTC 3 cut(s) 190, 336, 557
HpyCH4III ACNGT 3 cut(s) 85, 310, 803
HpyCH4IV ACGT 2 cut(s) 318, 504
HpyCH4V TGCA 7 cut(s) 147, 204, 302, 316, 333, 755, 1137
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 101, 180, 269, 322, 456, 629, 761
HpySE526I ACGT 2 cut(s) 318, 504
Hsp92II CATG 5 cut(s) 208, 292, 777, 790, 1204
KpnI GGTACC 1 cut(s) 389
KroI GCCGGC 2 cut(s) 52, 170
KroNI GCCGGC 2 cut(s) 54, 172
Ksp22I TGATCA 1 cut(s) 825
Kzo9I GATC 4 cut(s) 175, 352, 711, 825
LmnI GCTCC 3 cut(s) 366, 869, 1186
Lsp1109I GCAGC 7 cut(s) 173, 247, 345, 420, 739, 767, 1149
LweI GCATC 3 cut(s) 82, 226, 303
MaeI CTAG 4 cut(s) 44, 732, 1020, 1207
MaeII ACGT 2 cut(s) 318, 504
MaeIII GTNAC 4 cut(s) 835, 861, 881, 1153
MalI GATC 4 cut(s) 177, 354, 713, 827
MboI GATC 4 cut(s) 175, 352, 711, 825
MboII GAAGA 8 cut(s) 131, 432, 512, 529, 915, 918, 921, 924
MfeI CAATTG 1 cut(s) 1092
MflI RGATCY 1 cut(s) 711
MhlI GDGCHC 2 cut(s) 786, 1067
MlsI TGGCCA 1 cut(s) 602
MluCI AATT 2 cut(s) 907, 1092
MluNI TGGCCA 1 cut(s) 602
MlyI GAGTC 5 cut(s) 560, 620, 752, 840, 956
MmeI TCCRAC 1 cut(s) 57
Mox20I TGGCCA 1 cut(s) 602
MreI CGCCGGCG 1 cut(s) 170
MroNI GCCGGC 2 cut(s) 52, 170
MscI TGGCCA 1 cut(s) 602
MseI TTAA 2 cut(s) 701, 1172
MslI CAYNNNNRTG 1 cut(s) 974
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 3 cut(s) 186, 260, 590
MspI CCGG 4 cut(s) 53, 171, 511, 620
MspR9I CCNGG 2 cut(s) 400, 620
MunI CAATTG 1 cut(s) 1092
MvaI CCWGG 1 cut(s) 400
MwoI GCNNNNNNNGC 8 cut(s) 53, 101, 180, 269, 322, 456, 629, 761
NaeI GCCGGC 2 cut(s) 54, 172
NciI CCSGG 1 cut(s) 620
NcoI CCATGG 1 cut(s) 1200
NdeII GATC 4 cut(s) 175, 352, 711, 825
NgoMIV GCCGGC 2 cut(s) 52, 170
NlaIII CATG 5 cut(s) 208, 292, 777, 790, 1204
NlaIV GGNNCC 6 cut(s) 65, 273, 307, 387, 515, 811
NmeAIII GCCGAG 1 cut(s) 552
NmuCI GTSAC 2 cut(s) 835, 1153
PaeR7I CTCGAG 1 cut(s) 415
PagI TCATGA 1 cut(s) 288
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PdiI GCCGGC 2 cut(s) 54, 172
PfeI GAWTC 2 cut(s) 369, 1084
PflFI GACNNNGTC 1 cut(s) 506
PflMI CCANNNNNTGG 1 cut(s) 379
PkrI GCNGC 8 cut(s) 185, 188, 262, 335, 410, 754, 757, 1139
PleI GAGTC 5 cut(s) 560, 620, 751, 840, 955
PpsI GAGTC 5 cut(s) 560, 620, 751, 840, 955
Ppu21I YACGTR 1 cut(s) 319
PpuMI RGGWCCY 2 cut(s) 63, 809
PshAI GACNNNNGTC 1 cut(s) 39
Psp124BI GAGCTC 2 cut(s) 786, 1067
Psp5II RGGWCCY 2 cut(s) 63, 809
Psp6I CCWGG 1 cut(s) 398
PspGI CCWGG 1 cut(s) 398
PspN4I GGNNCC 6 cut(s) 65, 273, 307, 387, 515, 811
PspPI GGNCC 3 cut(s) 63, 103, 809
PspPPI RGGWCCY 2 cut(s) 63, 809
PsrI GAACNNNNNNTAC 2 cut(s) 886, 918
PstI CTGCAG 2 cut(s) 304, 757
PstNI CAGNNNCTG 2 cut(s) 299, 655
PsuI RGATCY 1 cut(s) 711
PsyI GACNNNGTC 1 cut(s) 506
RsaI GTAC 3 cut(s) 387, 821, 895
RsaNI GTAC 3 cut(s) 386, 820, 894
RseI CAYNNNNRTG 1 cut(s) 974
SacI GAGCTC 2 cut(s) 786, 1067
SaqAI TTAA 2 cut(s) 701, 1172
SatI GCNGC 8 cut(s) 184, 187, 261, 334, 409, 753, 756, 1138
Sau3AI GATC 4 cut(s) 175, 352, 711, 825
Sau96I GGNCC 3 cut(s) 63, 103, 809
ScaI AGTACT 2 cut(s) 821, 895
SchI GAGTC 5 cut(s) 560, 620, 752, 840, 956
ScrFI CCNGG 2 cut(s) 400, 620
SduI GDGCHC 2 cut(s) 786, 1067
SfaNI GCATC 3 cut(s) 82, 226, 303
SfcI CTRYAG 3 cut(s) 300, 753, 1044
Sfr274I CTCGAG 1 cut(s) 415
SgrAI CRCCGGYG 1 cut(s) 170
SinI GGWCC 2 cut(s) 63, 809
SlaI CTCGAG 1 cut(s) 415
SmiMI CAYNNNNRTG 1 cut(s) 974
SmlI CTYRAG 3 cut(s) 16, 266, 415
SmoI CTYRAG 3 cut(s) 16, 266, 415
Sse9I AATT 2 cut(s) 907, 1092
SsiI CCGC 6 cut(s) 184, 258, 588, 630, 677, 777
SspMI CTAG 4 cut(s) 44, 732, 1020, 1207
SstI GAGCTC 2 cut(s) 786, 1067
StyD4I CCNGG 2 cut(s) 398, 618
StyI CCWWGG 2 cut(s) 364, 1200
TaaI ACNGT 3 cut(s) 85, 310, 803
TaiI ACGT 2 cut(s) 321, 507
TaqI TCGA 3 cut(s) 210, 416, 564
TasI AATT 2 cut(s) 907, 1092
TatI WGTACW 2 cut(s) 819, 893
TauI GCSGC 1 cut(s) 186
TfiI GAWTC 2 cut(s) 369, 1084
Tru1I TTAA 2 cut(s) 701, 1172
Tru9I TTAA 2 cut(s) 701, 1172
TscAI CASTG 3 cut(s) 12, 185, 678
TseFI GTSAC 2 cut(s) 835, 1153
TseI GCWGC 7 cut(s) 186, 260, 333, 408, 752, 755, 1137
Tsp45I GTSAC 2 cut(s) 835, 1153
TspDTI ATGAA 1 cut(s) 924
TspGWI ACGGA 2 cut(s) 61, 486
TspRI CASTG 3 cut(s) 12, 185, 678
Tth111I GACNNNGTC 1 cut(s) 506
Van91I CCANNNNNTGG 1 cut(s) 379
VpaK11BI GGWCC 2 cut(s) 63, 809
XcmI CCANNNNNNNNNTGG 1 cut(s) 1066
XhoI CTCGAG 1 cut(s) 415
XspI CTAG 4 cut(s) 44, 732, 1020, 1207
ZrmI AGTACT 2 cut(s) 821, 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.