UPF0047 protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21065 |
| fragaria_vesca | FvH4_5g26780 |
| malus_domestica | MD06G1057400.v1.1 MD07G1016000.v1.1 |
| prunus_persica | Prupe.5G000700_v2.0.a1 Prupe.5G000800_v2.0.a1 |
| pyrus_communis | pycom06g04830 pycom16g26380 |
| rosa_chinensis | RchiOBHm_Chr7g0217691 |
| rosa_laevigata | RLG00000002448 RLG00000002454 |
| rosa_multiflora | Rmu_sc0000202.1_g000006 Rmu_sc0016034.1_g000001 |
| rosa_rugosa | Rorug07G0170500 Rorug07G0170700 |
| rosa_samantha | Rh2BG115900 Rh7AG311000 Rh7BG302900 Rh7CG330000 Rh7DG310800 |
| rosa_wichuraiana | Rw7G026400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 268 |
| AciI | CCGC | 2 cut(s) | 39, 266 |
| AfaI | GTAC | 1 cut(s) | 115 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 139, 269 |
| AgsI | TTSAA | 2 cut(s) | 34, 185 |
| AleI | CACNNNNGTG | 1 cut(s) | 69 |
| AluBI | AGCT | 1 cut(s) | 210 |
| AluI | AGCT | 1 cut(s) | 210 |
| Alw26I | GTCTC | 2 cut(s) | 119, 166 |
| ApeKI | GCWGC | 1 cut(s) | 307 |
| AsuHPI | GGTGA | 2 cut(s) | 41, 276 |
| AxyI | CCTNAGG | 1 cut(s) | 150 |
| BbvI | GCAGC | 1 cut(s) | 294 |
| BcoDI | GTCTC | 2 cut(s) | 119, 166 |
| BisI | GCNGC | 1 cut(s) | 308 |
| BlsI | GCNGC | 1 cut(s) | 309 |
| BmsI | GCATC | 3 cut(s) | 167, 258, 294 |
| BsaBI | GATNNNNATC | 1 cut(s) | 193 |
| BsaJI | CCNNGG | 1 cut(s) | 167 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 139, 269 |
| Bse21I | CCTNAGG | 1 cut(s) | 150 |
| Bse8I | GATNNNNATC | 1 cut(s) | 193 |
| BseDI | CCNNGG | 1 cut(s) | 167 |
| BseJI | GATNNNNATC | 1 cut(s) | 193 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 139, 269 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BseXI | GCAGC | 1 cut(s) | 294 |
| BsgI | GTGCAG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 139, 269 |
| BsmAI | GTCTC | 2 cut(s) | 119, 166 |
| BspACI | CCGC | 2 cut(s) | 39, 266 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BsrBI | CCGCTC | 1 cut(s) | 268 |
| BssECI | CCNNGG | 1 cut(s) | 167 |
| Bst4CI | ACNGT | 1 cut(s) | 168 |
| Bst6I | CTCTTC | 1 cut(s) | 59 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstDSI | CCRYGG | 1 cut(s) | 167 |
| BstEII | GGTNACC | 1 cut(s) | 282 |
| BstMAI | GTCTC | 2 cut(s) | 119, 166 |
| BstPI | GGTNACC | 1 cut(s) | 282 |
| BstV1I | GCAGC | 1 cut(s) | 294 |
| Bsu36I | CCTNAGG | 1 cut(s) | 150 |
| BtgI | CCRYGG | 1 cut(s) | 167 |
| Csp6I | GTAC | 1 cut(s) | 114 |
| CviAII | CATG | 2 cut(s) | 216, 324 |
| CviJI | RGCY | 1 cut(s) | 210 |
| CviKI_1 | RGCY | 1 cut(s) | 210 |
| CviQI | GTAC | 1 cut(s) | 114 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 59 |
| EarI | CTCTTC | 1 cut(s) | 59 |
| Eco81I | CCTNAGG | 1 cut(s) | 150 |
| Eco91I | GGTNACC | 1 cut(s) | 282 |
| EcoO65I | GGTNACC | 1 cut(s) | 282 |
| FaeI | CATG | 1 cut(s) | 219 |
| FaiI | YATR | 6 cut(s) | 99, 177, 217, 237, 300, 325 |
| FatI | CATG | 1 cut(s) | 215 |
| Fnu4HI | GCNGC | 1 cut(s) | 308 |
| Fsp4HI | GCNGC | 1 cut(s) | 308 |
| GluI | GCNGC | 1 cut(s) | 308 |
| Hin1II | CATG | 1 cut(s) | 219 |
| HindIII | AAGCTT | 1 cut(s) | 208 |
| HinfI | GANTC | 3 cut(s) | 30, 101, 189 |
| HphI | GGTGA | 2 cut(s) | 41, 276 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 272 |
| Hpy188III | TCNNGA | 3 cut(s) | 27, 149, 253 |
| HpyAV | CCTTC | 1 cut(s) | 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 168 |
| HpyCH4V | TGCA | 3 cut(s) | 61, 164, 310 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| Hsp92II | CATG | 1 cut(s) | 219 |
| LpnPI | CCDG | 4 cut(s) | 2, 12, 162, 214 |
| Lsp1109I | GCAGC | 1 cut(s) | 294 |
| LweI | GCATC | 3 cut(s) | 167, 258, 294 |
| MaeIII | GTNAC | 2 cut(s) | 253, 282 |
| MbiI | CCGCTC | 1 cut(s) | 268 |
| MboII | GAAGA | 1 cut(s) | 46 |
| MluCI | AATT | 1 cut(s) | 311 |
| MlyI | GAGTC | 1 cut(s) | 95 |
| MnlI | CCTC | 3 cut(s) | 62, 143, 145 |
| MseI | TTAA | 2 cut(s) | 212, 290 |
| MslI | CAYNNNNRTG | 1 cut(s) | 69 |
| NlaIII | CATG | 1 cut(s) | 219 |
| NmuCI | GTSAC | 2 cut(s) | 253, 282 |
| OliI | CACNNNNGTG | 1 cut(s) | 69 |
| PfeI | GAWTC | 2 cut(s) | 30, 189 |
| PkrI | GCNGC | 1 cut(s) | 309 |
| PleI | GAGTC | 1 cut(s) | 95 |
| PpsI | GAGTC | 1 cut(s) | 95 |
| PspEI | GGTNACC | 1 cut(s) | 282 |
| RsaI | GTAC | 1 cut(s) | 115 |
| RsaNI | GTAC | 1 cut(s) | 114 |
| RseI | CAYNNNNRTG | 1 cut(s) | 69 |
| SaqAI | TTAA | 2 cut(s) | 212, 290 |
| SatI | GCNGC | 1 cut(s) | 308 |
| SchI | GAGTC | 1 cut(s) | 95 |
| SetI | ASST | 2 cut(s) | 54, 212 |
| SfaNI | GCATC | 3 cut(s) | 167, 258, 294 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 69 |
| Sse9I | AATT | 1 cut(s) | 311 |
| SsiI | CCGC | 2 cut(s) | 39, 266 |
| TaaI | ACNGT | 1 cut(s) | 168 |
| TasI | AATT | 1 cut(s) | 311 |
| TfiI | GAWTC | 2 cut(s) | 30, 189 |
| Tru1I | TTAA | 2 cut(s) | 212, 290 |
| Tru9I | TTAA | 2 cut(s) | 212, 290 |
| TseFI | GTSAC | 2 cut(s) | 253, 282 |
| TseI | GCWGC | 1 cut(s) | 307 |
| Tsp45I | GTSAC | 2 cut(s) | 253, 282 |
| TspDTI | ATGAA | 2 cut(s) | 17, 312 |