UPF0047 protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21065 |
| fragaria_vesca | FvH4_5g26780 |
| malus_domestica | MD06G1057400.v1.1 MD07G1016000.v1.1 |
| prunus_persica | Prupe.5G000700_v2.0.a1 Prupe.5G000800_v2.0.a1 |
| pyrus_communis | pycom06g04830 pycom16g26380 |
| rosa_chinensis | RchiOBHm_Chr7g0217691 |
| rosa_laevigata | RLG00000002448 RLG00000002454 |
| rosa_multiflora | Rmu_sc0000202.1_g000006 Rmu_sc0016034.1_g000001 |
| rosa_rugosa | Rorug07G0170500 Rorug07G0170700 |
| rosa_samantha | Rh2BG115900 Rh7AG311000 Rh7BG302900 Rh7CG330000 Rh7DG310800 |
| rosa_wichuraiana | Rw7G026400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 84, 237 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AgsI | TTSAA | 3 cut(s) | 111, 232, 263 |
| AjnI | CCWGG | 1 cut(s) | 223 |
| AluBI | AGCT | 3 cut(s) | 9, 119, 267 |
| AluI | AGCT | 3 cut(s) | 9, 119, 267 |
| Alw26I | GTCTC | 1 cut(s) | 52 |
| AoxI | GGCC | 1 cut(s) | 135 |
| ApaI | GGGCCC | 1 cut(s) | 139 |
| ApeKI | GCWGC | 2 cut(s) | 116, 174 |
| AspS9I | GGNCC | 3 cut(s) | 125, 135, 136 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 178, 239, 270 |
| AvaII | GGWCC | 1 cut(s) | 125 |
| BaeGI | GKGCMC | 1 cut(s) | 139 |
| BanII | GRGCYC | 1 cut(s) | 139 |
| BbsI | GAAGAC | 1 cut(s) | 149 |
| BbvI | GCAGC | 2 cut(s) | 128, 161 |
| BciT130I | CCWGG | 1 cut(s) | 225 |
| BcoDI | GTCTC | 1 cut(s) | 52 |
| BisI | GCNGC | 2 cut(s) | 117, 175 |
| BlsI | GCNGC | 2 cut(s) | 118, 176 |
| Bme1390I | CCNGG | 1 cut(s) | 225 |
| Bme18I | GGWCC | 1 cut(s) | 125 |
| BmgT120I | GGNCC | 3 cut(s) | 125, 135, 136 |
| BmiI | GGNNCC | 2 cut(s) | 127, 137 |
| BmrFI | CCNGG | 1 cut(s) | 225 |
| BmsI | GCATC | 1 cut(s) | 72 |
| BpiI | GAAGAC | 1 cut(s) | 149 |
| BsaWI | WCCGGW | 1 cut(s) | 55 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 142, 172 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseBI | CCWGG | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BseSI | GKGCMC | 1 cut(s) | 139 |
| BseXI | GCAGC | 2 cut(s) | 128, 161 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BsiSI | CCGG | 1 cut(s) | 56 |
| BslFI | GGGAC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsmAI | GTCTC | 1 cut(s) | 52 |
| BsmFI | GGGAC | 1 cut(s) | 111 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp120I | GGGCCC | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 139 |
| BspACI | CCGC | 2 cut(s) | 84, 237 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspCNI | CTCAG | 1 cut(s) | 56 |
| BspLI | GGNNCC | 2 cut(s) | 127, 137 |
| Bst2UI | CCWGG | 1 cut(s) | 225 |
| Bst4CI | ACNGT | 2 cut(s) | 15, 71 |
| Bst6I | CTCTTC | 2 cut(s) | 163, 257 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 220 |
| BstDEI | CTNAG | 2 cut(s) | 43, 192 |
| BstMAI | GTCTC | 1 cut(s) | 52 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 220 |
| BstNI | CCWGG | 1 cut(s) | 225 |
| BstSCI | CCNGG | 1 cut(s) | 223 |
| BstSLI | GKGCMC | 1 cut(s) | 139 |
| BstV1I | GCAGC | 2 cut(s) | 128, 161 |
| BstV2I | GAAGAC | 1 cut(s) | 149 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 112 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtsIMutI | CAGTG | 1 cut(s) | 11 |
| Cfr13I | GGNCC | 3 cut(s) | 125, 135, 136 |
| CviJI | RGCY | 6 cut(s) | 9, 37, 119, 137, 174, 267 |
| CviKI_1 | RGCY | 6 cut(s) | 9, 37, 119, 137, 174, 267 |
| DdeI | CTNAG | 2 cut(s) | 43, 192 |
| Eam1104I | CTCTTC | 2 cut(s) | 163, 257 |
| EarI | CTCTTC | 2 cut(s) | 163, 257 |
| Eco24I | GRGCYC | 1 cut(s) | 139 |
| Eco47I | GGWCC | 1 cut(s) | 125 |
| EcoRII | CCWGG | 1 cut(s) | 223 |
| EcoT38I | GRGCYC | 1 cut(s) | 139 |
| FaiI | YATR | 2 cut(s) | 149, 316 |
| FaqI | GGGAC | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 2 cut(s) | 117, 175 |
| FriOI | GRGCYC | 1 cut(s) | 139 |
| Fsp4HI | GCNGC | 2 cut(s) | 117, 175 |
| GluI | GCNGC | 2 cut(s) | 117, 175 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HapII | CCGG | 1 cut(s) | 56 |
| HinfI | GANTC | 2 cut(s) | 228, 259 |
| HpaII | CCGG | 1 cut(s) | 56 |
| HphI | GGTGA | 4 cut(s) | 73, 178, 239, 270 |
| Hpy166II | GTNNAC | 1 cut(s) | 81 |
| Hpy188III | TCNNGA | 1 cut(s) | 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 81 |
| HpyAV | CCTTC | 2 cut(s) | 196, 307 |
| HpyCH4III | ACNGT | 2 cut(s) | 15, 71 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 220 |
| HpyF3I | CTNAG | 2 cut(s) | 43, 192 |
| LpnPI | CCDG | 7 cut(s) | 69, 152, 176, 200, 210, 237, 241 |
| Lsp1109I | GCAGC | 2 cut(s) | 128, 161 |
| LweI | GCATC | 1 cut(s) | 72 |
| MboII | GAAGA | 3 cut(s) | 154, 180, 244 |
| MhlI | GDGCHC | 1 cut(s) | 139 |
| MluCI | AATT | 2 cut(s) | 106, 271 |
| MnlI | CCTC | 6 cut(s) | 32, 50, 164, 168, 191, 260 |
| MspI | CCGG | 1 cut(s) | 56 |
| MspR9I | CCNGG | 1 cut(s) | 225 |
| MvaI | CCWGG | 1 cut(s) | 225 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 220 |
| NlaIV | GGNNCC | 2 cut(s) | 127, 137 |
| PfeI | GAWTC | 2 cut(s) | 228, 259 |
| PkrI | GCNGC | 2 cut(s) | 118, 176 |
| Psp6I | CCWGG | 1 cut(s) | 223 |
| PspGI | CCWGG | 1 cut(s) | 223 |
| PspN4I | GGNNCC | 2 cut(s) | 127, 137 |
| PspOMI | GGGCCC | 1 cut(s) | 135 |
| PspPI | GGNCC | 3 cut(s) | 125, 135, 136 |
| SatI | GCNGC | 2 cut(s) | 117, 175 |
| Sau96I | GGNCC | 3 cut(s) | 125, 135, 136 |
| ScrFI | CCNGG | 1 cut(s) | 225 |
| SduI | GDGCHC | 1 cut(s) | 139 |
| SetI | ASST | 6 cut(s) | 11, 121, 183, 252, 269, 283 |
| SfaNI | GCATC | 1 cut(s) | 72 |
| SinI | GGWCC | 1 cut(s) | 125 |
| Sse9I | AATT | 2 cut(s) | 106, 271 |
| SsiI | CCGC | 2 cut(s) | 84, 237 |
| StyD4I | CCNGG | 1 cut(s) | 223 |
| TaaI | ACNGT | 2 cut(s) | 15, 71 |
| TaqII | GACCGA | 1 cut(s) | 113 |
| TasI | AATT | 2 cut(s) | 106, 271 |
| TfiI | GAWTC | 2 cut(s) | 228, 259 |
| TscAI | CASTG | 1 cut(s) | 18 |
| TseI | GCWGC | 2 cut(s) | 116, 174 |
| TspDTI | ATGAA | 2 cut(s) | 63, 215 |
| TspRI | CASTG | 1 cut(s) | 18 |
| VpaK11BI | GGWCC | 1 cut(s) | 125 |