Rorug07G0170500

calcium-binding protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
13834888 .. 13842270
7383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0170500.1

Sequence Viewer

Length: 3012 bp
ATGGTGGCCACGAGCTCCCCGGACTGGCTCCCCGCTGGCTGGAGCGTCCAATTCAGAGCACAGAACAGGGGTCGCAGAACTGCGATTTACACAGATTTGGAAACTGGGAAAAAGTTCTTCTCCAAGGATGATGTTATACGCTATACTAAAAAAGCCACCAACCGTGGTGAAGAGCCTCAGCGTACAAATACCAAAAACCCCTCAGATAGAAGTCATTCGCAACTGGCAGCAAACACAGATGAATATCCTGAATGGTTGCCAGATGGTTGGAAAGTCGAATTGAGAACTCGAAAAACTGGCATTCAAGTTGGAAGGGAGTACAAGTGTTACATTGATCCGTTGACGGAATGTACATTTTATTCCAAGCCAGAGGTATTTCGATACCTGAAAACTGTAAAGCGCAAGAGCTGCAAATCCAGAAGTCACAAAATGGTTGTGGTTGAGAAGCATAATGTGGAAGATTTACCACCAGGGTGGATATTGGAGGTCAAAGTTAGAAAGGTTGCAAATCGAATTAGAAGAGATCCGTATTACACTGATCCAGTGCATGGATATGTCTTCCGCTCCAAAAAGGAAGTTATCCGCTACCTACAAACTGGAGAGACCAGTAAACATACAATCAAACCAAAGAGCATGGGCACCAATGATCTAAAGTTGACTGATGATGAAATTGCACTGTCATCTGCAACTAAAAAGCAAAAATTGAAGCACCCTGTCACCAGGCGGCAGCTTTCTGAAGCTAAAAAGAGTTATGAACCGAGTGGCCTAGACTTGCAAGAAACTGAAAACTCCAAATTGCAAGACAAGAGGCCCACTGAAAGCATATGTGCTTTGGCTCCAGTTACTGAGGTTATCCTAGAGAAGCATTTCACTGAGAATCTGGTTGAAGAATGTGTAGAAACTAAGGGAGACTGTTCCCCAAGATGGTCATCACAACCAAAAGCTGAACCATCTAGCAAACACGAAGGCAAAAGGTCATCACAACCGCAAGCTGTACTCTCTAACAAACGTGAGGCTAAAAGGTCCAAGTTGCAAGACAAGAGGGTAACTGATGATAGCAAAGTTGCTTTGGCTCCGACAGCTGAGGCTGTCCCACATGAGCATTTAAGTGAGAGTGTGGTTGAAAATTGTGCCAAAACCAAGGAATATTGTTCTCCAAGCAAGTCATTACAGCCAAAAGCTGAACTCTCCAACAAGTGTGAAGATCCTGGCAAAGTGGTTTTTTCTGAAGATGACCCTGCTTTGACTCCTGCTGCTAACACCTTGAATAAGAACTCACATATGAGTCGGATGGAAAGGAGAAACACCAGGAGATCCCAAATAGATGCAAGAAAATCGAAACAGAAGGAAAAGCTTAATTTGCCACGTCGGTCCTCAAAACGACTTGCTGGGCTTGAACCAGAGCCAGTAAATAGCCTGGTTTCCACTGTACAGGCTCTTCAAGTTACAACTAGAAAGTCTAGTAAAGGTGATGGCAGTCGAGATGCCGGTTTGGCTTTAGATGATTTTGTAAATAGAGCATCTCAGCAGCTTGGGGATGCATCAGAAACAGAGGTTGCACATCATACTATAACTGGAATAATATCTACAGTACAAGGAGAGCCATTGAGCAAGATCAAGAGGCCATTTGATGGTCTTGAAGTACAGCCTGTAGATACCATGGTTTCCAATGAACAAACTCTTCACGTTGCAACTAGAAAGTCTAGTAGAGGTGATGCAAGTCGAGATGCGGGTTTGGCTTCAAATGATTTTATCAATGGAGCATCTCTGCAGCTTGGGGATGCATCAGAACCGGAGGCTGCACATGATAGGTTAACTGACATAAACTGTACATCACATGGAGAATCATTAAACAAGGGCAAGACGTTTCTTGACGACCAAGTGGTTCCTAAAGAGCAACATCATAGGCTGGAACCTGAGAAAATGGATGCTGAGAAGCCTGGACCAGAGCTCTGCTTTCTGTTTGGATCAGACCCATGCTTAGAATTTGCCTTCAAAACCCTTACTGGCGAATTGCCAATAGCTGATGCTGTGGATAACGAATCTATTTTGAAACCTGCAGCTGATACAGTGCAAAAAGAGAACACACTTGACATTGGGCGCTGCAGTAGAAAACCAAGGGCAATTTCGAACAAATCTAAGAAAGCTAAAGAACTTAAGTTACCTCATCGGACTTCAAAACGGCTGGCTGGGCTTGAACCTGAGCTGCTGGCCAAACCTATGTCCAGTGAAAGAGGTCTTCGAAATGCAACGGCAAAGTCCTGTAGAAGTATAGCCCTCCCAGCTGTAGATTCTGCACATGAATCATCTCAGCAGTTTGAGGCTGGGCAAGAGAACAAGGTTGCTCATGATTTGTGTACTGTTATAAACCCTTCAATTCATGAGGAATCATTGAACAAGATTGAGAAATCTCTCAAGGACGAACCTGTTCCTGAGGAGAAACCCCGCGAGTTGGAAATTGAGAAGGCAGCTGTCGAGAATCCAGTGTCACAGTTTTCATTCCCTTTCCTGGATACTTGGTCTGATCCATGCCTTGATTTTGCATTTAAGACCCTTACAGGTGAAATTCCGATAGAGGATGATTTGTTTCAGGGTTACTTTCAGGAAAACCTTGTCACCTCTCACAACCAGAGAGATAGCTTGGCACTGCCAGATTTTGGCTCACCTAACGTTTTCCAAAGTGACATATCACCTCAGTTCGATGCACCAGAACAGTCTGTCTCGGCCCAATTGTTTCCCATGAATTCTTCTTTGCCACCTGCCGGAAATGTGAGCTTGTCAAATTGCAATGGTGTTGGGTTCGGCCAACAGTTGTCCACGAATTCTTCATTTCTGCCTGCAGGAAATTTGAGATTTTCAAGTGGCAGTGGGGTTGGTTCAGGCCAACATTTATCCGTGAATTCTTCATTCTTACCTGCAGGAAATGTGGGCCAGCCAAATTGGAGCGGGATTGGTACACAGAACCCTTGCTTAGCAAGCAAAAAGGATTTTCATGGAAAGGTGAAATCCTAA

Protein Analysis

1003

Amino Acids

111.15

Weight (kDa)

8.4

Isoelectric Point (pI)

52.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBD PF01429 84 - 133 9.4e-06 Methyl-CpG binding domain
MBD PF01429 155 - 201 2.6e-06 Methyl-CpG binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2366
AarI CACCTGC 1 cut(s) 2767
Acc36I ACCTGC 3 cut(s) 2065, 2767, 2923
AccB1I GGYRCC 1 cut(s) 638
AccB7I CCANNNNNTGG 3 cut(s) 548, 1631, 2657
AccBSI CCGCTC 2 cut(s) 564, 2946
AccII CGCG 1 cut(s) 2448
AciI CCGC 8 cut(s) 33, 562, 583, 724, 986, 1730, 2446, 2946
AclI AACGTT 1 cut(s) 2670
AclWI GGATC 7 cut(s) 329, 518, 533, 1199, 1308, 1975, 2519
AcoI YGGCCR 3 cut(s) 6, 2211, 2803
AcsI RAATTY 6 cut(s) 1985, 2565, 2743, 2821, 2845, 2899
AcuI CTGAAG 2 cut(s) 756, 1248
AfiI CCNNNNNNNGG 9 cut(s) 24, 39, 548, 924, 1631, 2452, 2509, 2657, 2762
AflII CTTAAG 1 cut(s) 2156
AjiI CACGTC 1 cut(s) 1367
AjnI CCWGG 7 cut(s) 469, 719, 1207, 1307, 1416, 1939, 2508
AjuI GAANNNNNNNTTGG 2 cut(s) 2110, 2142
AleI CACNNNNGTG 1 cut(s) 472
Alw21I GWGCWC 3 cut(s) 17, 61, 1953
Alw26I GTCTC 3 cut(s) 596, 903, 2725
AlwI GGATC 7 cut(s) 329, 518, 533, 1199, 1308, 1975, 2519
AlwNI CAGNNNCTG 1 cut(s) 845
AoxI GGCC 9 cut(s) 6, 763, 809, 1622, 2211, 2724, 2803, 2881, 2929
ApoI RAATTY 6 cut(s) 1985, 2565, 2743, 2821, 2845, 2899
Asp700I GAANNNNTTC 4 cut(s) 113, 214, 866, 2427
AspLEI GCGC 2 cut(s) 402, 2103
AspS9I GGNCC 6 cut(s) 810, 1023, 1371, 1943, 2725, 2929
AsuC2I CCSGG 1 cut(s) 20
AsuHPI GGTGA 8 cut(s) 179, 709, 1481, 1724, 2573, 2608, 2655, 2682
AsuII TTCGAA 2 cut(s) 2129, 2242
AvaII GGWCC 3 cut(s) 1023, 1371, 1943
AxyI CCTNAGG 1 cut(s) 2433
BaeGI GKGCMC 1 cut(s) 641
BaeI ACNNNNGTAYC 2 cut(s) 1647, 1680
BalI TGGCCA 2 cut(s) 8, 2213
BanI GGYRCC 1 cut(s) 638
BanII GRGCYC 2 cut(s) 17, 1953
BarI GAAGNNNNNNTAC 2 cut(s) 1422, 1454
BauI CACGAG 1 cut(s) 10
BbsI GAAGAC 2 cut(s) 550, 2231
Bbv12I GWGCWC 3 cut(s) 17, 61, 1953
BbvCI CCTCAGC 2 cut(s) 177, 1083
BccI CCATC 6 cut(s) 257, 918, 958, 1285, 1466, 1625
BceAI ACGGC 2 cut(s) 2198, 2268
BcgI CGANNNNNNTGC 2 cut(s) 1317, 1351
BciT130I CCWGG 7 cut(s) 471, 721, 1209, 1309, 1418, 1941, 2510
BciVI GTATCC 1 cut(s) 2506
BcnI CCSGG 1 cut(s) 20
BcoDI GTCTC 3 cut(s) 596, 903, 2725
BfaI CTAG 7 cut(s) 767, 857, 954, 1452, 1461, 1695, 1704
BfmI CTRYAG 9 cut(s) 1587, 1650, 1769, 2058, 2104, 2263, 2286, 2838, 2916
BfoI RGCGCY 1 cut(s) 2104
BfrI CTTAAG 1 cut(s) 2156
BfuAI ACCTGC 3 cut(s) 2065, 2767, 2923
BfuI GTATCC 1 cut(s) 2506
BglI GCCNNNNNGGC 1 cut(s) 1493
BlpI GCTNAGC 1 cut(s) 2971
Bme1390I CCNGG 8 cut(s) 20, 471, 721, 1209, 1309, 1418, 1941, 2510
Bme18I GGWCC 3 cut(s) 1023, 1371, 1943
BmgBI CACGTC 1 cut(s) 1367
BmgT120I GGNCC 6 cut(s) 810, 1023, 1371, 1943, 2725, 2929
BmiI GGNNCC 6 cut(s) 29, 640, 837, 1074, 1887, 1914
BmrFI CCNGG 8 cut(s) 20, 471, 721, 1209, 1309, 1418, 1941, 2510
BmrI ACTGGG 1 cut(s) 114
BmuI ACTGGG 1 cut(s) 114
BpiI GAAGAC 2 cut(s) 550, 2231
BpmI CTGGAG 3 cut(s) 61, 618, 822
Bpu10I CCTNAGC 3 cut(s) 177, 1083, 2202
Bpu1102I GCTNAGC 1 cut(s) 2971
Bpu14I TTCGAA 2 cut(s) 2129, 2242
BpuEI CTTGAG 1 cut(s) 2399
BpuMI CCSGG 1 cut(s) 20
BsaBI GATNNNNATC 2 cut(s) 243, 928
BsaI GGTCTC 1 cut(s) 596
BsaJI CCNNGG 7 cut(s) 18, 123, 163, 470, 1140, 1659, 2117
BsaWI WCCGGW 1 cut(s) 1792
BsaXI ACNNNNNCTCC 2 cut(s) 308, 338
Bsc4I CCNNNNNNNGG 9 cut(s) 24, 39, 548, 924, 1631, 2452, 2509, 2657, 2762
Bse118I RCCGGY 1 cut(s) 1487
Bse21I CCTNAGG 1 cut(s) 2433
Bse3DI GCAATG 1 cut(s) 2794
Bse8I GATNNNNATC 2 cut(s) 243, 928
BseBI CCWGG 7 cut(s) 471, 721, 1209, 1309, 1418, 1941, 2510
BseDI CCNNGG 7 cut(s) 18, 123, 163, 470, 1140, 1659, 2117
BseGI GGATG 6 cut(s) 133, 1296, 1543, 1786, 1933, 2584
BseJI GATNNNNATC 2 cut(s) 243, 928
BseLI CCNNNNNNNGG 9 cut(s) 24, 39, 548, 924, 1631, 2452, 2509, 2657, 2762
BseMI GCAATG 1 cut(s) 2794
BseRI GAGGAG 1 cut(s) 2450
BseSI GKGCMC 1 cut(s) 641
BseYI CCCAGC 4 cut(s) 1388, 2189, 2281, 2324
BsgI GTGCAG 2 cut(s) 1785, 2280
Bsh1236I CGCG 1 cut(s) 2448
BshFI GGCC 9 cut(s) 8, 765, 811, 1624, 2213, 2726, 2805, 2883, 2931
BshNI GGYRCC 1 cut(s) 638
BsiHKAI GWGCWC 3 cut(s) 17, 61, 1953
BsiSI CCGG 4 cut(s) 20, 1488, 1793, 2763
BslFI GGGAC 1 cut(s) 1076
BslI CCNNNNNNNGG 9 cut(s) 24, 39, 548, 924, 1631, 2452, 2509, 2657, 2762
BsmAI GTCTC 3 cut(s) 596, 903, 2725
BsmFI GGGAC 1 cut(s) 1076
BsmI GAATGC 1 cut(s) 300
BsnI GGCC 9 cut(s) 8, 765, 811, 1624, 2213, 2726, 2805, 2883, 2931
Bso31I GGTCTC 1 cut(s) 596
Bsp119I TTCGAA 2 cut(s) 2129, 2242
Bsp1286I GDGCHC 4 cut(s) 17, 61, 641, 1953
Bsp1407I TGTACA 3 cut(s) 350, 1429, 1829
Bsp143I GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
Bsp1720I GCTNAGC 1 cut(s) 2971
Bsp19I CCATGG 1 cut(s) 1659
BspACI CCGC 8 cut(s) 33, 562, 583, 724, 986, 1730, 2446, 2946
BspANI GGCC 9 cut(s) 8, 765, 811, 1624, 2213, 2726, 2805, 2883, 2931
BspFNI CGCG 1 cut(s) 2448
BspHI TCATGA 2 cut(s) 2347, 2380
BspLI GGNNCC 6 cut(s) 29, 640, 837, 1074, 1887, 1914
BspMAI CTGCAG 5 cut(s) 1773, 2062, 2108, 2842, 2920
BspMI ACCTGC 3 cut(s) 2065, 2767, 2923
BspPI GGATC 7 cut(s) 329, 518, 533, 1199, 1308, 1975, 2519
BspQI GCTCTTC 2 cut(s) 165, 1443
BspT104I TTCGAA 2 cut(s) 2129, 2242
BspT107I GGYRCC 1 cut(s) 638
BspTI CTTAAG 1 cut(s) 2156
BspTNI GGTCTC 1 cut(s) 596
BsrBI CCGCTC 2 cut(s) 564, 2946
BsrDI GCAATG 1 cut(s) 2794
BsrFI RCCGGY 1 cut(s) 1487
BsrGI TGTACA 3 cut(s) 350, 1429, 1829
BssAI RCCGGY 1 cut(s) 1487
BssECI CCNNGG 7 cut(s) 18, 123, 163, 470, 1140, 1659, 2117
BssMI GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
BssSI CACGAG 1 cut(s) 10
BssT1I CCWWGG 4 cut(s) 123, 1140, 1659, 2117
Bst2BI CACGAG 1 cut(s) 10
Bst2UI CCWGG 7 cut(s) 471, 721, 1209, 1309, 1418, 1941, 2510
Bst6I CTCTTC 4 cut(s) 165, 514, 1443, 1686
BstAFI CTTAAG 1 cut(s) 2156
BstAPI GCANNNNNTGC 1 cut(s) 408
BstAUI TGTACA 3 cut(s) 350, 1429, 1829
BstBI TTCGAA 2 cut(s) 2129, 2242
BstC8I GCNNGC 7 cut(s) 37, 990, 2187, 2211, 2838, 2933, 2977
BstDSI CCRYGG 2 cut(s) 163, 1659
BstF5I GGATG 6 cut(s) 133, 1296, 1543, 1786, 1933, 2584
BstFNI CGCG 1 cut(s) 2448
BstH2I RGCGCY 1 cut(s) 2104
BstHHI GCGC 2 cut(s) 402, 2103
BstKTI GATC 9 cut(s) 337, 526, 541, 649, 1207, 1316, 1617, 1970, 2527
BstMAI GTCTC 3 cut(s) 596, 903, 2725
BstMBI GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
BstMWI GCNNNNNNNGC 8 cut(s) 408, 1079, 1360, 1493, 1736, 2191, 2282, 2976
BstNI CCWGG 7 cut(s) 471, 721, 1209, 1309, 1418, 1941, 2510
BstSCI CCNGG 8 cut(s) 18, 469, 719, 1207, 1307, 1416, 1939, 2508
BstSFI CTRYAG 9 cut(s) 1587, 1650, 1769, 2058, 2104, 2263, 2286, 2838, 2916
BstSLI GKGCMC 1 cut(s) 641
BstUI CGCG 1 cut(s) 2448
BstV2I GAAGAC 2 cut(s) 550, 2231
BstX2I RGATCY 3 cut(s) 523, 1204, 1313
BstXI CCANNNNNNTGG 2 cut(s) 267, 474
BstYI RGATCY 3 cut(s) 523, 1204, 1313
Bsu36I CCTNAGG 1 cut(s) 2433
BsuI GTATCC 1 cut(s) 2506
BsuRI GGCC 9 cut(s) 8, 765, 811, 1624, 2213, 2726, 2805, 2883, 2931
BtgI CCRYGG 2 cut(s) 163, 1659
BtrI CACGTC 1 cut(s) 1367
BtsCI GGATG 6 cut(s) 133, 1296, 1543, 1786, 1933, 2584
BtsI GCAGTG 2 cut(s) 2645, 2872
BveI ACCTGC 3 cut(s) 2065, 2767, 2923
Cac8I GCNNGC 7 cut(s) 37, 990, 2187, 2211, 2838, 2933, 2977
CaiI CAGNNNCTG 1 cut(s) 845
CciI TCATGA 2 cut(s) 2347, 2380
CfoI GCGC 2 cut(s) 402, 2103
Cfr10I RCCGGY 1 cut(s) 1487
Cfr13I GGNCC 6 cut(s) 810, 1023, 1371, 1943, 2725, 2929
CseI GACGC 1 cut(s) 34
DpnI GATC 9 cut(s) 336, 525, 540, 648, 1206, 1315, 1616, 1969, 2526
DpnII GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
EaeI YGGCCR 3 cut(s) 6, 2211, 2803
Eam1104I CTCTTC 4 cut(s) 165, 514, 1443, 1686
EarI CTCTTC 4 cut(s) 165, 514, 1443, 1686
Ecl136II GAGCTC 2 cut(s) 15, 1951
Eco130I CCWWGG 4 cut(s) 123, 1140, 1659, 2117
Eco24I GRGCYC 2 cut(s) 17, 1953
Eco31I GGTCTC 1 cut(s) 596
Eco47I GGWCC 3 cut(s) 1023, 1371, 1943
Eco53kI GAGCTC 2 cut(s) 15, 1951
Eco57I CTGAAG 2 cut(s) 756, 1248
Eco81I CCTNAGG 1 cut(s) 2433
EcoICRI GAGCTC 2 cut(s) 15, 1951
EcoRI GAATTC 3 cut(s) 2743, 2821, 2899
EcoRII CCWGG 7 cut(s) 469, 719, 1207, 1307, 1416, 1939, 2508
EcoT14I CCWWGG 4 cut(s) 123, 1140, 1659, 2117
EcoT22I ATGCAT 2 cut(s) 1543, 1786
EcoT38I GRGCYC 2 cut(s) 17, 1953
ErhI CCWWGG 4 cut(s) 123, 1140, 1659, 2117
FaqI GGGAC 1 cut(s) 1076
FauI CCCGC 4 cut(s) 40, 1723, 2453, 2939
FauNDI CATATG 2 cut(s) 824, 1281
FokI GGATG 6 cut(s) 140, 1303, 1550, 1793, 1940, 2591
FriOI GRGCYC 2 cut(s) 17, 1953
FspBI CTAG 7 cut(s) 767, 857, 954, 1452, 1461, 1695, 1704
GlaI GCGC 2 cut(s) 401, 2102
GsaI CCCAGC 4 cut(s) 1392, 2193, 2285, 2328
GsuI CTGGAG 3 cut(s) 61, 618, 822
HaeII RGCGCY 1 cut(s) 2104
HaeIII GGCC 9 cut(s) 8, 765, 811, 1624, 2213, 2726, 2805, 2883, 2931
HapII CCGG 4 cut(s) 20, 1488, 1793, 2763
HgaI GACGC 1 cut(s) 34
HhaI GCGC 2 cut(s) 402, 2103
Hin6I GCGC 2 cut(s) 400, 2101
HinP1I GCGC 2 cut(s) 400, 2101
HincII GTYRAC 3 cut(s) 342, 657, 1815
HindII GTYRAC 3 cut(s) 342, 657, 1815
HindIII AAGCTT 1 cut(s) 1352
HinfI GANTC 9 cut(s) 877, 1246, 1285, 1844, 2042, 2291, 2303, 2387, 2479
HpaI GTTAAC 1 cut(s) 1815
HpaII CCGG 4 cut(s) 20, 1488, 1793, 2763
HphI GGTGA 8 cut(s) 179, 709, 1481, 1724, 2573, 2608, 2655, 2682
Hpy166II GTNNAC 7 cut(s) 342, 611, 657, 1815, 2358, 2817, 2957
Hpy8I GTNNAC 7 cut(s) 342, 611, 657, 1815, 2358, 2817, 2957
Hpy99I CGWCG 1 cut(s) 1371
HpyAV CCTTC 6 cut(s) 306, 959, 1339, 2002, 2382, 2458
HpyCH4IV ACGT 5 cut(s) 1009, 1366, 1686, 1865, 2670
HpyF10VI GCNNNNNNNGC 8 cut(s) 408, 1079, 1360, 1493, 1736, 2191, 2282, 2976
HpySE526I ACGT 5 cut(s) 1009, 1366, 1686, 1865, 2670
HspAI GCGC 2 cut(s) 400, 2101
KspAI GTTAAC 1 cut(s) 1815
Kzo9I GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
LguI GCTCTTC 2 cut(s) 165, 1443
LmnI GCTCC 8 cut(s) 20, 33, 42, 569, 841, 1078, 1760, 2943
MaeI CTAG 7 cut(s) 767, 857, 954, 1452, 1461, 1695, 1704
MaeII ACGT 5 cut(s) 1009, 1366, 1686, 1865, 2670
MalI GATC 9 cut(s) 336, 525, 540, 648, 1206, 1315, 1616, 1969, 2526
MbiI CCGCTC 2 cut(s) 564, 2946
MboI GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
MfeI CAATTG 1 cut(s) 2729
MflI RGATCY 3 cut(s) 523, 1204, 1313
MhlI GDGCHC 4 cut(s) 17, 61, 641, 1953
MlsI TGGCCA 2 cut(s) 8, 2213
MluNI TGGCCA 2 cut(s) 8, 2213
MlyI GAGTC 2 cut(s) 1240, 1294
MmeI TCCRAC 6 cut(s) 248, 289, 1100, 1215, 1268, 2433
Mox20I TGGCCA 2 cut(s) 8, 2213
Mph1103I ATGCAT 2 cut(s) 1543, 1786
MroXI GAANNNNTTC 4 cut(s) 113, 214, 866, 2427
MscI TGGCCA 2 cut(s) 8, 2213
MseI TTAA 6 cut(s) 1106, 1356, 1814, 1850, 2157, 2547
MslI CAYNNNNRTG 3 cut(s) 472, 552, 1107
Msp20I TGGCCA 2 cut(s) 8, 2213
MspA1I CMGCKG 5 cut(s) 35, 1082, 2063, 2285, 2471
MspCI CTTAAG 1 cut(s) 2156
MspI CCGG 4 cut(s) 20, 1488, 1793, 2763
MspR9I CCNGG 8 cut(s) 20, 471, 721, 1209, 1309, 1418, 1941, 2510
MunI CAATTG 1 cut(s) 2729
Mva1269I GAATGC 1 cut(s) 300
MvaI CCWGG 7 cut(s) 471, 721, 1209, 1309, 1418, 1941, 2510
MvnI CGCG 1 cut(s) 2448
MwoI GCNNNNNNNGC 8 cut(s) 408, 1079, 1360, 1493, 1736, 2191, 2282, 2976
NciI CCSGG 1 cut(s) 20
NcoI CCATGG 1 cut(s) 1659
NdeI CATATG 2 cut(s) 824, 1281
NdeII GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
NlaIV GGNNCC 6 cut(s) 29, 640, 837, 1074, 1887, 1914
NmeAIII GCCGAG 1 cut(s) 2702
NmuCI GTSAC 5 cut(s) 422, 715, 2487, 2614, 2681
NsiI ATGCAT 2 cut(s) 1543, 1786
NspV TTCGAA 2 cut(s) 2129, 2242
OliI CACNNNNGTG 1 cut(s) 472
PagI TCATGA 2 cut(s) 2347, 2380
PaqCI CACCTGC 1 cut(s) 2767
PciSI GCTCTTC 2 cut(s) 165, 1443
PctI GAATGC 1 cut(s) 300
PdmI GAANNNNTTC 4 cut(s) 113, 214, 866, 2427
PfeI GAWTC 7 cut(s) 877, 1844, 2042, 2291, 2303, 2387, 2479
PflMI CCANNNNNTGG 3 cut(s) 548, 1631, 2657
PfoI TCCNGGA 1 cut(s) 2508
PleI GAGTC 2 cut(s) 1240, 1293
PpsI GAGTC 2 cut(s) 1240, 1293
PsiI TTATAA 1 cut(s) 2366
Psp124BI GAGCTC 2 cut(s) 17, 1953
Psp1406I AACGTT 1 cut(s) 2670
Psp6I CCWGG 7 cut(s) 469, 719, 1207, 1307, 1416, 1939, 2508
PspFI CCCAGC 4 cut(s) 1388, 2189, 2281, 2324
PspGI CCWGG 7 cut(s) 469, 719, 1207, 1307, 1416, 1939, 2508
PspN4I GGNNCC 6 cut(s) 29, 640, 837, 1074, 1887, 1914
PspPI GGNCC 6 cut(s) 810, 1023, 1371, 1943, 2725, 2929
PsrI GAACNNNNNNTAC 2 cut(s) 2145, 2177
PstI CTGCAG 5 cut(s) 1773, 2062, 2108, 2842, 2920
PstNI CAGNNNCTG 1 cut(s) 845
PsuI RGATCY 3 cut(s) 523, 1204, 1313
PvuII CAGCTG 4 cut(s) 1082, 2063, 2285, 2471
RseI CAYNNNNRTG 3 cut(s) 472, 552, 1107
SacI GAGCTC 2 cut(s) 17, 1953
SapI GCTCTTC 2 cut(s) 165, 1443
SaqAI TTAA 6 cut(s) 1106, 1356, 1814, 1850, 2157, 2547
Sau3AI GATC 9 cut(s) 334, 523, 538, 646, 1204, 1313, 1614, 1967, 2524
Sau96I GGNCC 6 cut(s) 810, 1023, 1371, 1943, 2725, 2929
SbfI CCTGCAGG 2 cut(s) 2842, 2920
SchI GAGTC 2 cut(s) 1240, 1294
ScrFI CCNGG 8 cut(s) 20, 471, 721, 1209, 1309, 1418, 1941, 2510
SdaI CCTGCAGG 2 cut(s) 2842, 2920
SduI GDGCHC 4 cut(s) 17, 61, 641, 1953
SfcI CTRYAG 9 cut(s) 1587, 1650, 1769, 2058, 2104, 2263, 2286, 2838, 2916
SfuI TTCGAA 2 cut(s) 2129, 2242
SinI GGWCC 3 cut(s) 1023, 1371, 1943
SmiMI CAYNNNNRTG 3 cut(s) 472, 552, 1107
SmlI CTYRAG 2 cut(s) 2156, 2414
SmoI CTYRAG 2 cut(s) 2156, 2414
Sse8387I CCTGCAGG 2 cut(s) 2842, 2920
SsiI CCGC 8 cut(s) 33, 562, 583, 724, 986, 1730, 2446, 2946
SspI AATATT 1 cut(s) 1148
SspMI CTAG 7 cut(s) 767, 857, 954, 1452, 1461, 1695, 1704
SstI GAGCTC 2 cut(s) 17, 1953
StyD4I CCNGG 8 cut(s) 18, 469, 719, 1207, 1307, 1416, 1939, 2508
StyI CCWWGG 4 cut(s) 123, 1140, 1659, 2117
TaiI ACGT 5 cut(s) 1012, 1369, 1689, 1868, 2673
TaqII GACCGA 1 cut(s) 1359
TatI WGTACW 8 cut(s) 318, 350, 994, 1429, 1591, 1642, 1829, 2357
TauI GCSGC 1 cut(s) 727
TfiI GAWTC 7 cut(s) 877, 1844, 2042, 2291, 2303, 2387, 2479
Tru1I TTAA 6 cut(s) 1106, 1356, 1814, 1850, 2157, 2547
Tru9I TTAA 6 cut(s) 1106, 1356, 1814, 1850, 2157, 2547
TseFI GTSAC 5 cut(s) 422, 715, 2487, 2614, 2681
Tsp45I GTSAC 5 cut(s) 422, 715, 2487, 2614, 2681
TspGWI ACGGA 4 cut(s) 327, 359, 516, 2884
Van91I CCANNNNNTGG 3 cut(s) 548, 1631, 2657
Vha464I CTTAAG 1 cut(s) 2156
VpaK11BI GGWCC 3 cut(s) 1023, 1371, 1943
XapI RAATTY 6 cut(s) 1985, 2565, 2743, 2821, 2845, 2899
XmnI GAANNNNTTC 4 cut(s) 113, 214, 866, 2427
XspI CTAG 7 cut(s) 767, 857, 954, 1452, 1461, 1695, 1704
Zsp2I ATGCAT 2 cut(s) 1543, 1786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.