DNA topoisomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26701 |
| rosa_chinensis | RchiOBHm_Chr1g0370531 RchiOBHm_Chr4g0420291 RchiOBHm_Chr4g0421651 RchiOBHm_Chr4g0421661 |
| rosa_laevigata | RLG00000007661 RLG00000027031 |
| rosa_multiflora | Rmu_sc0022275.1_g000007 Rmu_sc0026595.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00362880 Rroxscaffold_5G00362920 |
| rosa_rugosa | Rorug01G0357400 Rorug04G0161800 Rorug04G0174200 |
| rosa_samantha | Rh1AG366300 Rh1BG328900 Rh1BG329600 Rh1BG329800 Rh1CG342300 Rh1CG342400 Rh1CG343500 Rh1CG343700 Rh4BG236700 Rh4BG236800 Rh4CG248500 Rh4CG248600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 288 |
| AccII | CGCG | 1 cut(s) | 29 |
| AciI | CCGC | 1 cut(s) | 27 |
| AclWI | GGATC | 1 cut(s) | 205 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AflIII | ACRYGT | 1 cut(s) | 160 |
| AgsI | TTSAA | 4 cut(s) | 15, 93, 308, 314 |
| AjnI | CCWGG | 1 cut(s) | 154 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 333, 365 |
| AluBI | AGCT | 1 cut(s) | 146 |
| AluI | AGCT | 1 cut(s) | 146 |
| AlwI | GGATC | 1 cut(s) | 205 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| AsuHPI | GGTGA | 2 cut(s) | 76, 235 |
| BciT130I | CCWGG | 1 cut(s) | 156 |
| Bme1390I | CCNGG | 1 cut(s) | 156 |
| BmrFI | CCNGG | 1 cut(s) | 156 |
| BmrI | ACTGGG | 1 cut(s) | 282 |
| BmsI | GCATC | 1 cut(s) | 290 |
| BmuI | ACTGGG | 1 cut(s) | 282 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 2 cut(s) | 87, 277 |
| Bse3DI | GCAATG | 1 cut(s) | 116 |
| BseBI | CCWGG | 1 cut(s) | 156 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseMI | GCAATG | 1 cut(s) | 116 |
| BseNI | ACTGG | 2 cut(s) | 87, 277 |
| BsgI | GTGCAG | 1 cut(s) | 168 |
| Bsh1236I | CGCG | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bsp143I | GATC | 3 cut(s) | 42, 57, 197 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspFNI | CGCG | 1 cut(s) | 29 |
| BspPI | GGATC | 1 cut(s) | 205 |
| BsrDI | GCAATG | 1 cut(s) | 116 |
| BsrI | ACTGG | 2 cut(s) | 87, 277 |
| BssMI | GATC | 3 cut(s) | 42, 57, 197 |
| Bst2UI | CCWGG | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 2 cut(s) | 76, 193 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstFNI | CGCG | 1 cut(s) | 29 |
| BstKTI | GATC | 3 cut(s) | 45, 60, 200 |
| BstMBI | GATC | 3 cut(s) | 42, 57, 197 |
| BstNI | CCWGG | 1 cut(s) | 156 |
| BstNSI | RCATGY | 1 cut(s) | 164 |
| BstSCI | CCNGG | 1 cut(s) | 154 |
| BstUI | CGCG | 1 cut(s) | 29 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtsIMutI | CAGTG | 1 cut(s) | 81 |
| CviAII | CATG | 3 cut(s) | 161, 242, 252 |
| CviJI | RGCY | 1 cut(s) | 146 |
| CviKI_1 | RGCY | 1 cut(s) | 146 |
| DpnI | GATC | 3 cut(s) | 44, 59, 199 |
| DpnII | GATC | 3 cut(s) | 42, 57, 197 |
| EcoRII | CCWGG | 1 cut(s) | 154 |
| FaeI | CATG | 3 cut(s) | 164, 245, 255 |
| FaiI | YATR | 5 cut(s) | 101, 127, 162, 243, 253 |
| FatI | CATG | 3 cut(s) | 160, 241, 251 |
| FblI | GTMKAC | 1 cut(s) | 288 |
| FokI | GGATG | 1 cut(s) | 182 |
| Hin1II | CATG | 3 cut(s) | 164, 245, 255 |
| HincII | GTYRAC | 1 cut(s) | 289 |
| HindII | GTYRAC | 1 cut(s) | 289 |
| HphI | GGTGA | 2 cut(s) | 76, 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 289 |
| Hpy8I | GTNNAC | 1 cut(s) | 289 |
| HpyCH4III | ACNGT | 2 cut(s) | 76, 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 215 |
| HpyCH4V | TGCA | 4 cut(s) | 116, 185, 213, 333 |
| HpySE526I | ACGT | 1 cut(s) | 215 |
| Hsp92II | CATG | 3 cut(s) | 164, 245, 255 |
| Kzo9I | GATC | 3 cut(s) | 42, 57, 197 |
| LpnPI | CCDG | 4 cut(s) | 100, 141, 168, 258 |
| LweI | GCATC | 1 cut(s) | 290 |
| MaeII | ACGT | 1 cut(s) | 215 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MalI | GATC | 3 cut(s) | 44, 59, 199 |
| MboI | GATC | 3 cut(s) | 42, 57, 197 |
| MboII | GAAGA | 1 cut(s) | 185 |
| MfeI | CAATTG | 1 cut(s) | 117 |
| MluCI | AATT | 6 cut(s) | 17, 117, 177, 234, 328, 341 |
| MmeI | TCCRAC | 1 cut(s) | 175 |
| MnlI | CCTC | 3 cut(s) | 24, 259, 295 |
| MseI | TTAA | 7 cut(s) | 21, 149, 165, 218, 327, 336, 364 |
| MslI | CAYNNNNRTG | 1 cut(s) | 218 |
| MspR9I | CCNGG | 1 cut(s) | 156 |
| MunI | CAATTG | 1 cut(s) | 117 |
| MvaI | CCWGG | 1 cut(s) | 156 |
| MvnI | CGCG | 1 cut(s) | 29 |
| NdeII | GATC | 3 cut(s) | 42, 57, 197 |
| NlaIII | CATG | 3 cut(s) | 164, 245, 255 |
| NspI | RCATGY | 1 cut(s) | 164 |
| PciI | ACATGT | 1 cut(s) | 160 |
| PscI | ACATGT | 1 cut(s) | 160 |
| Psp6I | CCWGG | 1 cut(s) | 154 |
| PspGI | CCWGG | 1 cut(s) | 154 |
| RseI | CAYNNNNRTG | 1 cut(s) | 218 |
| SalI | GTCGAC | 1 cut(s) | 287 |
| SaqAI | TTAA | 7 cut(s) | 21, 149, 165, 218, 327, 336, 364 |
| Sau3AI | GATC | 3 cut(s) | 42, 57, 197 |
| ScrFI | CCNGG | 1 cut(s) | 156 |
| SetI | ASST | 6 cut(s) | 148, 157, 190, 218, 306, 321 |
| SfaNI | GCATC | 1 cut(s) | 290 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 218 |
| Sse9I | AATT | 6 cut(s) | 17, 117, 177, 234, 328, 341 |
| SsiI | CCGC | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 154 |
| TaaI | ACNGT | 2 cut(s) | 76, 193 |
| TaiI | ACGT | 1 cut(s) | 218 |
| TaqI | TCGA | 1 cut(s) | 288 |
| TasI | AATT | 6 cut(s) | 17, 117, 177, 234, 328, 341 |
| Tru1I | TTAA | 7 cut(s) | 21, 149, 165, 218, 327, 336, 364 |
| Tru9I | TTAA | 7 cut(s) | 21, 149, 165, 218, 327, 336, 364 |
| TscAI | CASTG | 1 cut(s) | 81 |
| TspDTI | ATGAA | 2 cut(s) | 186, 258 |
| TspRI | CASTG | 1 cut(s) | 81 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XceI | RCATGY | 1 cut(s) | 164 |
| XmiI | GTMKAC | 1 cut(s) | 288 |