Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006852

Physical Location & Seq

Genomic Coordinates Reverse (-)

28136704 .. 28138395

Gene Structure 1692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0161800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGTCCCCATCTGCTCCAACCATCCATAACTTGTTATTTGCGGATGATAGTTTTCTGTTTGGTGAAGCTTCTGTTAGAGAGTGCCAGGCTATTAAGAATATTCTCTCCATTTATGCCAGGGCTTCAGGGCAGAAAATTAACCTAGAGAAGTCTAGTGTGGTGTTTAGTGGTAATGTGGGCTTGCATTCGAGGAATCACCTGGCAGCCATTCTTGGTGTTAAATGTGTGAAGGAACATGGGTTATACCTTGGTCTGTCAATACATGTAGGGCATAATAAAACAGCCATTTTTGCTTATTTGAAGGAAAGACTCACCAAGAAATTGATAAGTTGGAGATCTAAGATACTTAGTGTAGGAGGGAAAGAGCTTCTTCTCAAAGTTGTTGCTCAAGCTCTTCCGAATTATGTCATGAATTGTTATCTACTTCCCAAGTCCCTTTGTGACGACCTCCAGCAACTCTGTGCCCAATTTTTTTGGGGAAGCACTGATGAAAAAAGGAGGATTCATTGGAGATCGTGGGAAAAGATGTGTCTTCCAAAGGAGCAGGGTGGGTTAGGATTTAAACATCTTTATGCTCATAACTTAGCCATGTTATCAAAACAAGGGTGGAGGTTTTTGTCCAACCCTACATCGCTTGTAGCTCGAGTATTTAAGGCTGTCTACTACCCTAATGGTTCGTTTCTTACAGCTGATTTGGGTGATAGACCATCCTATTCTTGGCGAAGTATTCTGGAAGCCAGATCAACGTTACAAGCTGGTATTTTTCAGAGGATTGGCAATGGAACCTCTGTTAATATATGGACAGATGAATGGATTCTTAATGTTGCAGCCCACTCAATATCTAGACTGTCCGAAACTGTTTTTGAATATGTTGCTGACTTGCTCGATCCTAGTACTGGATCATGGGACAATGTTGCAGTTCATGCATGTTTTGTACCTGATATTGCCACACATATTTTGACTATTCCCTTAAGTAGACGCTTTGGGGCAGATAAGATTGCTTGGAAGTTTGACAAGAAAGGTTGGTTTTCGGTTAAATCTGCGTACAAGGTGGCTTGTGCTTTTTCCATTGGCCACATTTTTGCTTCAACATCCAATGGAGATCCGTATGCTCAGCTTTGGAAGGCTTTGTGGAAGGCCAAAGTTCCCAACAAGGTGGCCATTTTTGGATGGCGTGCTGCTCATAATCTTCTTCCTACTAGAGTGGCTTTGACAGTGAAGGGGTATACCGGTGAGGTACGTTGTGTTGTGTGTAGCCAAGCTGCAGAATCGCTTGAACATCTTTTCTGTGACTGTTTGATAGCCCGGGATATTTGGAGTGCCCATCCTTTCGTGATCTCTCCCTCTAGTTTACCGTGGAAGGACTGGTTGTTGGTAAGGGCTAGTTCTCTGTCTTCAACCCTCTTTGATAAGCTGCTTATTCTTTTATGGAGTCTGTGGAGAAACCGAAATGAAATTTTATGGAAGAATCATTCTCAGACTAGCTCTTGCCTTGTGGCAAATGCTTTAGCTTGGTATGAGGAATTTCTACAAGCAAACATATGTGGGAATCCTTCTCAAGGTCGTCATCAGTTGAGTAAGAAGTGGGAACCCCCTGTTGGGGATGTTTTGAAATTGAACGTCGATGGAGCCTATTTACTTCAAGTTCCCTATGGGGGTACAGGGGGTGTGCTTCGAAATATGCAAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0003674 GO:0003824 GO:0003916 GO:0003917 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006260 GO:0006265 GO:0006325 GO:0006338 GO:0006725 GO:0006807 GO:0006996 GO:0007059 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016853 GO:0031298 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0070013 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Topo_C_assoc Topoisom_I Topoisom_I_N

Protein Analysis

563

Amino Acids

63.01

Weight (kDa)

9.38

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	355 - 439	1.6e-18	zinc-binding in reverse transcriptase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26701
rosa_chinensis	RchiOBHm_Chr1g0370531 RchiOBHm_Chr4g0420291 RchiOBHm_Chr4g0421651 RchiOBHm_Chr4g0421661
rosa_laevigata	RLG00000007661 RLG00000027031
rosa_multiflora	Rmu_sc0022275.1_g000007 Rmu_sc0026595.1_g000002
rosa_roxburghii	Rroxscaffold_5G00362880 Rroxscaffold_5G00362920
rosa_rugosa	Rorug01G0357400 Rorug04G0161800 Rorug04G0174200
rosa_samantha	Rh1AG366300 Rh1BG328900 Rh1BG329600 Rh1BG329800 Rh1CG342300 Rh1CG342400 Rh1CG343500 Rh1CG343700 Rh4BG236700 Rh4BG236800 Rh4CG248500 Rh4CG248600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	660, 976, 1226
AciI	CCGC	1 cut(s)	41
AclI	AACGTT	1 cut(s)	746
AclWI	GGATC	3 cut(s)	881, 907, 1097
AcoI	YGGCCR	2 cut(s)	1072, 1158
AcsI	RAATTY	2 cut(s)	1455, 1523
AcuI	CTGAAG	1 cut(s)	108
AfaI	GTAC	5 cut(s)	895, 936, 1046, 1239, 1660
AfiI	CCNNNNNNNGG	7 cut(s)	717, 896, 1559, 1598, 1599, 1600, 1655
AflII	CTTAAG	1 cut(s)	970
AflIII	ACRYGT	1 cut(s)	262
AgeI	ACCGGT	1 cut(s)	1229
AgsI	TTSAA	8 cut(s)	301, 866, 1089, 1277, 1398, 1612, 1618, 1643
AjnI	CCWGG	3 cut(s)	84, 116, 198
AjuI	GAANNNNNNNTTGG	2 cut(s)	1581, 1613
AlwI	GGATC	3 cut(s)	881, 907, 1097
Ama87I	CYCGRG	2 cut(s)	642, 1305
AoxI	GGCC	3 cut(s)	1072, 1137, 1158
ApeKI	GCWGC	5 cut(s)	203, 827, 1178, 1262, 1414
ApoI	RAATTY	2 cut(s)	1455, 1523
AsiGI	ACCGGT	1 cut(s)	1229
Asp700I	GAANNNNTTC	1 cut(s)	813
AsuC2I	CCSGG	2 cut(s)	1306, 1307
AsuHPI	GGTGA	5 cut(s)	74, 188, 304, 710, 1244
AsuII	TTCGAA	1 cut(s)	1675
AvaI	CYCGRG	2 cut(s)	642, 1305
BaeGI	GKGCMC	2 cut(s)	466, 1324
BalI	TGGCCA	2 cut(s)	1074, 1160
BbsI	GAAGAC	2 cut(s)	524, 1386
BbvI	GCAGC	5 cut(s)	215, 839, 1165, 1249, 1401
BccI	CCATC	6 cut(s)	16, 29, 715, 1164, 1332, 1619
BciT130I	CCWGG	3 cut(s)	86, 118, 200
BcnI	CCSGG	2 cut(s)	1306, 1307
BfaI	CTAG	8 cut(s)	143, 153, 843, 891, 1200, 1347, 1383, 1482
BfmI	CTRYAG	1 cut(s)	1263
BfrI	CTTAAG	1 cut(s)	970
BglII	AGATCT	1 cut(s)	335
BisI	GCNGC	5 cut(s)	204, 828, 1179, 1263, 1415
BlpI	GCTNAGC	1 cut(s)	1113
BlsI	GCNGC	5 cut(s)	205, 829, 1180, 1264, 1416
BmcAI	AGTACT	1 cut(s)	895
Bme1390I	CCNGG	5 cut(s)	86, 118, 200, 1306, 1307
BmeT110I	CYCGRG	2 cut(s)	642, 1305
BmiI	GGNNCC	3 cut(s)	784, 1590, 1630
BmrFI	CCNGG	5 cut(s)	86, 118, 200, 1306, 1307
BpiI	GAAGAC	2 cut(s)	524, 1386
BpmI	CTGGAG	1 cut(s)	434
Bpu1102I	GCTNAGC	1 cut(s)	1113
Bpu14I	TTCGAA	1 cut(s)	1675
BpuEI	CTTGAG	2 cut(s)	372, 1542
BpuMI	CCSGG	2 cut(s)	1306, 1307
BsaJI	CCNNGG	4 cut(s)	117, 247, 1305, 1355
BsaWI	WCCGGW	1 cut(s)	1229
Bsc4I	CCNNNNNNNGG	7 cut(s)	717, 896, 1559, 1598, 1599, 1600, 1655
Bse118I	RCCGGY	1 cut(s)	1229
Bse1I	ACTGG	2 cut(s)	901, 1370
Bse3DI	GCAATG	1 cut(s)	784
BseBI	CCWGG	3 cut(s)	86, 118, 200
BseDI	CCNNGG	4 cut(s)	117, 247, 1305, 1355
BseGI	GGATG	7 cut(s)	21, 49, 707, 1091, 1175, 1324, 1609
BseLI	CCNNNNNNNGG	7 cut(s)	717, 896, 1559, 1598, 1599, 1600, 1655
BseMI	GCAATG	1 cut(s)	784
BseMII	CTCAG	2 cut(s)	1127, 1490
BseNI	ACTGG	2 cut(s)	901, 1370
BseSI	GKGCMC	2 cut(s)	466, 1324
BseXI	GCAGC	5 cut(s)	215, 839, 1165, 1249, 1401
BshFI	GGCC	3 cut(s)	1074, 1139, 1160
BshTI	ACCGGT	1 cut(s)	1229
BsiHKCI	CYCGRG	2 cut(s)	642, 1305
BsiSI	CCGG	2 cut(s)	1230, 1306
BslFI	GGGAC	2 cut(s)	418, 920
BslI	CCNNNNNNNGG	7 cut(s)	717, 896, 1559, 1598, 1599, 1600, 1655
BsmFI	GGGAC	2 cut(s)	418, 920
BsmI	GAATGC	1 cut(s)	184
BsnI	GGCC	3 cut(s)	1074, 1139, 1160
BsoBI	CYCGRG	2 cut(s)	642, 1305
Bsp119I	TTCGAA	1 cut(s)	1675
Bsp1286I	GDGCHC	2 cut(s)	466, 1324
Bsp143I	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
Bsp1720I	GCTNAGC	1 cut(s)	1113
BspACI	CCGC	1 cut(s)	41
BspANI	GGCC	3 cut(s)	1074, 1139, 1160
BspCNI	CTCAG	2 cut(s)	1126, 1489
BspHI	TCATGA	1 cut(s)	408
BspLI	GGNNCC	3 cut(s)	784, 1590, 1630
BspMAI	CTGCAG	1 cut(s)	1267
BspPI	GGATC	3 cut(s)	881, 907, 1097
BspQI	GCTCTTC	1 cut(s)	399
BspT104I	TTCGAA	1 cut(s)	1675
BspTI	CTTAAG	1 cut(s)	970
BsrDI	GCAATG	1 cut(s)	784
BsrFI	RCCGGY	1 cut(s)	1229
BsrI	ACTGG	2 cut(s)	901, 1370
BssAI	RCCGGY	1 cut(s)	1229
BssECI	CCNNGG	4 cut(s)	117, 247, 1305, 1355
BssMI	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
BssNAI	GTATAC	1 cut(s)	1227
BssT1I	CCWWGG	1 cut(s)	247
Bst1107I	GTATAC	1 cut(s)	1227
Bst2UI	CCWGG	3 cut(s)	86, 118, 200
Bst4CI	ACNGT	5 cut(s)	849, 859, 1216, 1295, 1356
Bst6I	CTCTTC	1 cut(s)	399
BstAFI	CTTAAG	1 cut(s)	970
BstAPI	GCANNNNNTGC	1 cut(s)	923
BstBI	TTCGAA	1 cut(s)	1675
BstC8I	GCNNGC	2 cut(s)	182, 1176
BstDEI	CTNAG	5 cut(s)	339, 347, 583, 1113, 1476
BstDSI	CCRYGG	1 cut(s)	1355
BstENI	CCTNNNNNAGG	1 cut(s)	1557
BstF5I	GGATG	7 cut(s)	21, 49, 707, 1091, 1175, 1324, 1609
BstKTI	GATC	7 cut(s)	338, 515, 743, 889, 902, 1105, 1338
BstMBI	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
BstMWI	GCNNNNNNNGC	2 cut(s)	290, 923
BstNI	CCWGG	3 cut(s)	86, 118, 200
BstNSI	RCATGY	2 cut(s)	266, 930
BstSCI	CCNGG	5 cut(s)	84, 116, 198, 1304, 1305
BstSFI	CTRYAG	1 cut(s)	1263
BstSLI	GKGCMC	2 cut(s)	466, 1324
BstV1I	GCAGC	5 cut(s)	215, 839, 1165, 1249, 1401
BstV2I	GAAGAC	2 cut(s)	524, 1386
BstX2I	RGATCY	2 cut(s)	335, 1102
BstXI	CCANNNNNNTGG	1 cut(s)	1156
BstYI	RGATCY	2 cut(s)	335, 1102
BstZ17I	GTATAC	1 cut(s)	1227
BsuRI	GGCC	3 cut(s)	1074, 1139, 1160
BtgI	CCRYGG	1 cut(s)	1355
BtgZI	GCGATG	1 cut(s)	615
BtsCI	GGATG	7 cut(s)	21, 49, 707, 1091, 1175, 1324, 1609
BtsIMutI	CAGTG	2 cut(s)	483, 1221
Cac8I	GCNNGC	2 cut(s)	182, 1176
CciI	TCATGA	1 cut(s)	408
Cfr10I	RCCGGY	1 cut(s)	1229
Cfr9I	CCCGGG	1 cut(s)	1305
CseI	GACGC	1 cut(s)	987
Csp6I	GTAC	5 cut(s)	894, 935, 1045, 1238, 1659
CspAI	ACCGGT	1 cut(s)	1229
CviAII	CATG	7 cut(s)	236, 263, 409, 589, 903, 923, 927
CviQI	GTAC	5 cut(s)	894, 935, 1045, 1238, 1659
DdeI	CTNAG	5 cut(s)	339, 347, 583, 1113, 1476
DpnI	GATC	7 cut(s)	337, 514, 742, 888, 901, 1104, 1337
DpnII	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
DraI	TTTAAA	1 cut(s)	562
EaeI	YGGCCR	2 cut(s)	1072, 1158
Eam1104I	CTCTTC	1 cut(s)	399
EarI	CTCTTC	1 cut(s)	399
Eco130I	CCWWGG	1 cut(s)	247
Eco57I	CTGAAG	1 cut(s)	108
Eco88I	CYCGRG	2 cut(s)	642, 1305
EcoNI	CCTNNNNNAGG	1 cut(s)	1557
EcoRII	CCWGG	3 cut(s)	84, 116, 198
EcoT14I	CCWWGG	1 cut(s)	247
EcoT22I	ATGCAT	1 cut(s)	928
ErhI	CCWWGG	1 cut(s)	247
FaeI	CATG	7 cut(s)	239, 266, 412, 592, 906, 926, 930
FalI	AAGNNNNNCTT	2 cut(s)	354, 386
FaqI	GGGAC	2 cut(s)	418, 920
FatI	CATG	7 cut(s)	235, 262, 408, 588, 902, 922, 926
FauNDI	CATATG	1 cut(s)	1541
FblI	GTMKAC	3 cut(s)	660, 976, 1226
Fnu4HI	GCNGC	5 cut(s)	204, 828, 1179, 1263, 1415
FokI	GGATG	7 cut(s)	8, 56, 694, 1078, 1182, 1311, 1616
Fsp4HI	GCNGC	5 cut(s)	204, 828, 1179, 1263, 1415
FspBI	CTAG	8 cut(s)	143, 153, 843, 891, 1200, 1347, 1383, 1482
GluI	GCNGC	5 cut(s)	204, 828, 1179, 1263, 1415
GsuI	CTGGAG	1 cut(s)	434
HaeIII	GGCC	3 cut(s)	1074, 1139, 1160
HapII	CCGG	2 cut(s)	1230, 1306
HgaI	GACGC	1 cut(s)	987
Hin1II	CATG	7 cut(s)	239, 266, 412, 592, 906, 926, 930
HindIII	AAGCTT	1 cut(s)	66
HinfI	GANTC	8 cut(s)	193, 309, 502, 814, 1268, 1432, 1468, 1549
HpaII	CCGG	2 cut(s)	1230, 1306
HphI	GGTGA	5 cut(s)	74, 188, 304, 710, 1244
Hpy166II	GTNNAC	4 cut(s)	661, 977, 1227, 1352
Hpy188I	TCNGA	4 cut(s)	399, 768, 853, 1479
Hpy188III	TCNNGA	4 cut(s)	409, 731, 843, 1333
Hpy8I	GTNNAC	4 cut(s)	661, 977, 1227, 1352
Hpy99I	CGWCG	1 cut(s)	1625
HpyAV	CCTTC	7 cut(s)	223, 295, 1117, 1129, 1213, 1354, 1563
HpyCH4III	ACNGT	5 cut(s)	849, 859, 1216, 1295, 1356
HpyCH4IV	ACGT	3 cut(s)	746, 1240, 1620
HpyCH4V	TGCA	6 cut(s)	184, 827, 917, 926, 1265, 1684
HpyF10VI	GCNNNNNNNGC	2 cut(s)	290, 923
HpyF3I	CTNAG	5 cut(s)	339, 347, 583, 1113, 1476
HpySE526I	ACGT	3 cut(s)	746, 1240, 1620
Hsp92II	CATG	7 cut(s)	239, 266, 412, 592, 906, 926, 930
Kzo9I	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
LguI	GCTCTTC	1 cut(s)	399
LmnI	GCTCC	3 cut(s)	19, 541, 1628
Lsp1109I	GCAGC	5 cut(s)	215, 839, 1165, 1249, 1401
MaeI	CTAG	8 cut(s)	143, 153, 843, 891, 1200, 1347, 1383, 1482
MaeII	ACGT	3 cut(s)	746, 1240, 1620
MaeIII	GTNAC	3 cut(s)	440, 747, 1289
MalI	GATC	7 cut(s)	337, 514, 742, 888, 901, 1104, 1337
MboI	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
MboII	GAAGA	7 cut(s)	362, 386, 524, 1181, 1184, 1386, 1477
MflI	RGATCY	2 cut(s)	335, 1102
MhlI	GDGCHC	2 cut(s)	466, 1324
MlsI	TGGCCA	2 cut(s)	1074, 1160
MluCI	AATT	8 cut(s)	135, 320, 400, 412, 467, 1455, 1523, 1613
MluNI	TGGCCA	2 cut(s)	1074, 1160
MlyI	GAGTC	2 cut(s)	303, 1441
MmeI	TCCRAC	3 cut(s)	41, 311, 645
Mox20I	TGGCCA	2 cut(s)	1074, 1160
Mph1103I	ATGCAT	1 cut(s)	928
MroXI	GAANNNNTTC	1 cut(s)	813
MscI	TGGCCA	2 cut(s)	1074, 1160
MseI	TTAA	9 cut(s)	93, 138, 219, 561, 651, 792, 819, 971, 1035
MslI	CAYNNNNRTG	1 cut(s)	570
Msp20I	TGGCCA	2 cut(s)	1074, 1160
MspA1I	CMGCKG	1 cut(s)	689
MspCI	CTTAAG	1 cut(s)	970
MspI	CCGG	2 cut(s)	1230, 1306
MspR9I	CCNGG	5 cut(s)	86, 118, 200, 1306, 1307
Mva1269I	GAATGC	1 cut(s)	184
MvaI	CCWGG	3 cut(s)	86, 118, 200
MwoI	GCNNNNNNNGC	2 cut(s)	290, 923
NciI	CCSGG	2 cut(s)	1306, 1307
NdeI	CATATG	1 cut(s)	1541
NdeII	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
NlaIII	CATG	7 cut(s)	239, 266, 412, 592, 906, 926, 930
NlaIV	GGNNCC	3 cut(s)	784, 1590, 1630
NmuCI	GTSAC	2 cut(s)	440, 1289
NsiI	ATGCAT	1 cut(s)	928
NspI	RCATGY	2 cut(s)	266, 930
NspV	TTCGAA	1 cut(s)	1675
PaeR7I	CTCGAG	1 cut(s)	642
PagI	TCATGA	1 cut(s)	408
PciI	ACATGT	1 cut(s)	262
PciSI	GCTCTTC	1 cut(s)	399
PctI	GAATGC	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	813
PfeI	GAWTC	6 cut(s)	193, 502, 814, 1268, 1468, 1549
PinAI	ACCGGT	1 cut(s)	1229
PkrI	GCNGC	5 cut(s)	205, 829, 1180, 1264, 1416
PleI	GAGTC	2 cut(s)	303, 1440
PpsI	GAGTC	2 cut(s)	303, 1440
PscI	ACATGT	1 cut(s)	262
Psp1406I	AACGTT	1 cut(s)	746
Psp6I	CCWGG	3 cut(s)	84, 116, 198
PspGI	CCWGG	3 cut(s)	84, 116, 198
PspN4I	GGNNCC	3 cut(s)	784, 1590, 1630
PspXI	VCTCGAGB	1 cut(s)	642
PstI	CTGCAG	1 cut(s)	1267
PsuI	RGATCY	2 cut(s)	335, 1102
PvuII	CAGCTG	1 cut(s)	689
RsaI	GTAC	5 cut(s)	895, 936, 1046, 1239, 1660
RsaNI	GTAC	5 cut(s)	894, 935, 1045, 1238, 1659
RseI	CAYNNNNRTG	1 cut(s)	570
SapI	GCTCTTC	1 cut(s)	399
SaqAI	TTAA	9 cut(s)	93, 138, 219, 561, 651, 792, 819, 971, 1035
SatI	GCNGC	5 cut(s)	204, 828, 1179, 1263, 1415
Sau3AI	GATC	7 cut(s)	335, 512, 740, 886, 899, 1102, 1335
ScaI	AGTACT	1 cut(s)	895
SchI	GAGTC	2 cut(s)	303, 1441
ScrFI	CCNGG	5 cut(s)	86, 118, 200, 1306, 1307
SduI	GDGCHC	2 cut(s)	466, 1324
SfcI	CTRYAG	1 cut(s)	1263
Sfr274I	CTCGAG	1 cut(s)	642
SfuI	TTCGAA	1 cut(s)	1675
SlaI	CTCGAG	1 cut(s)	642
SmaI	CCCGGG	1 cut(s)	1307
SmiMI	CAYNNNNRTG	1 cut(s)	570
SmlI	CTYRAG	4 cut(s)	387, 642, 970, 1557
SmoI	CTYRAG	4 cut(s)	387, 642, 970, 1557
Sse9I	AATT	8 cut(s)	135, 320, 400, 412, 467, 1455, 1523, 1613
SsiI	CCGC	1 cut(s)	41
SspI	AATATT	1 cut(s)	100
SspMI	CTAG	8 cut(s)	143, 153, 843, 891, 1200, 1347, 1383, 1482
StyD4I	CCNGG	5 cut(s)	84, 116, 198, 1304, 1305
StyI	CCWWGG	1 cut(s)	247
TaaI	ACNGT	5 cut(s)	849, 859, 1216, 1295, 1356
TaiI	ACGT	3 cut(s)	749, 1243, 1623
TaqI	TCGA	5 cut(s)	188, 643, 885, 1623, 1675
TasI	AATT	8 cut(s)	135, 320, 400, 412, 467, 1455, 1523, 1613
TatI	WGTACW	1 cut(s)	893
TfiI	GAWTC	6 cut(s)	193, 502, 814, 1268, 1468, 1549
Tru1I	TTAA	9 cut(s)	93, 138, 219, 561, 651, 792, 819, 971, 1035
Tru9I	TTAA	9 cut(s)	93, 138, 219, 561, 651, 792, 819, 971, 1035
TscAI	CASTG	2 cut(s)	490, 1221
TseFI	GTSAC	2 cut(s)	440, 1289
TseI	GCWGC	5 cut(s)	203, 827, 1178, 1262, 1414
Tsp45I	GTSAC	2 cut(s)	440, 1289
TspDTI	ATGAA	6 cut(s)	425, 494, 504, 822, 911, 1467
TspGWI	ACGGA	1 cut(s)	1095
TspMI	CCCGGG	1 cut(s)	1305
TspRI	CASTG	2 cut(s)	490, 1221
Vha464I	CTTAAG	1 cut(s)	970
XagI	CCTNNNNNAGG	1 cut(s)	1557
XapI	RAATTY	2 cut(s)	1455, 1523
XbaI	TCTAGA	1 cut(s)	842
XceI	RCATGY	2 cut(s)	266, 930
XcmI	CCANNNNNNNNNTGG	1 cut(s)	714
XhoI	CTCGAG	1 cut(s)	642
XmaI	CCCGGG	1 cut(s)	1305
XmiI	GTMKAC	3 cut(s)	660, 976, 1226
XmnI	GAANNNNTTC	1 cut(s)	813
XspI	CTAG	8 cut(s)	143, 153, 843, 891, 1200, 1347, 1383, 1482
ZrmI	AGTACT	1 cut(s)	895
Zsp2I	ATGCAT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.