lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G63490 AT1G63490 AT1G63490 AT1G63490 |
| fragaria_vesca | FvH4_5g02310 FvH4_5g02310 FvH4_5g02310 FvH4_5g02310 FvH4_5g02310 FvH4_5g02310 |
| malus_domestica | MD06G1081900.v1.1 MD14G1103700.v1.1 |
| prunus_persica | Prupe.5G099000_v2.0.a1 Prupe.5G099000_v2.0.a1 Prupe.5G099000_v2.0.a1 Prupe.5G099000_v2.0.a1 |
| pyrus_communis | pycom06g07880 pycom14g09970 |
| rosa_chinensis | RchiOBHm_Chr7g0197841 |
| rosa_laevigata | RLG00000003906 |
| rosa_multiflora | Rmu_co8257227.1_g000001 Rmu_co8363405.1_g000001 Rmu_sc0034285.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00258150 |
| rosa_rugosa | Rorug07G0043800 Rorug07G0043900 |
| rosa_samantha | Rh7AG167800 Rh7BG170700 Rh7CG177100 Rh7DG169600 |
| rosa_wichuraiana | Rw7G014620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 585 |
| AarI | CACCTGC | 1 cut(s) | 280 |
| Acc36I | ACCTGC | 2 cut(s) | 280, 1012 |
| AccB1I | GGYRCC | 1 cut(s) | 1264 |
| AccBSI | CCGCTC | 1 cut(s) | 1113 |
| AccII | CGCG | 2 cut(s) | 963, 1123 |
| AciI | CCGC | 4 cut(s) | 206, 848, 1113, 1121 |
| AclWI | GGATC | 5 cut(s) | 134, 147, 360, 856, 1228 |
| AcsI | RAATTY | 1 cut(s) | 898 |
| AfaI | GTAC | 2 cut(s) | 335, 881 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 124, 289, 681, 1107 |
| AgsI | TTSAA | 5 cut(s) | 392, 856, 898, 1070, 1216 |
| AjnI | CCWGG | 1 cut(s) | 1089 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 900, 932 |
| AluBI | AGCT | 6 cut(s) | 216, 418, 592, 672, 953, 1235 |
| AluI | AGCT | 6 cut(s) | 216, 418, 592, 672, 953, 1235 |
| Alw26I | GTCTC | 3 cut(s) | 845, 1014, 1132 |
| AlwI | GGATC | 5 cut(s) | 134, 147, 360, 856, 1228 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1004 |
| Ama87I | CYCGRG | 1 cut(s) | 1011 |
| AoxI | GGCC | 4 cut(s) | 44, 296, 500, 975 |
| ApaI | GGGCCC | 1 cut(s) | 48 |
| ApeKI | GCWGC | 2 cut(s) | 428, 1083 |
| ApoI | RAATTY | 1 cut(s) | 898 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1031 |
| AspA2I | CCTAGG | 1 cut(s) | 17 |
| AspLEI | GCGC | 1 cut(s) | 963 |
| AspS9I | GGNCC | 4 cut(s) | 44, 45, 975, 1001 |
| AsuC2I | CCSGG | 1 cut(s) | 930 |
| AsuHPI | GGTGA | 4 cut(s) | 272, 304, 659, 1073 |
| AsuII | TTCGAA | 3 cut(s) | 314, 527, 721 |
| AvaI | CYCGRG | 1 cut(s) | 1011 |
| AvaII | GGWCC | 1 cut(s) | 1001 |
| AvrII | CCTAGG | 1 cut(s) | 17 |
| BaeGI | GKGCMC | 2 cut(s) | 48, 930 |
| BamHI | GGATCC | 1 cut(s) | 139 |
| BanI | GGYRCC | 1 cut(s) | 1264 |
| BanII | GRGCYC | 2 cut(s) | 48, 183 |
| BbsI | GAAGAC | 4 cut(s) | 19, 60, 272, 323 |
| BbvCI | CCTCAGC | 1 cut(s) | 171 |
| BbvI | GCAGC | 2 cut(s) | 415, 1095 |
| BccI | CCATC | 2 cut(s) | 106, 1064 |
| BciT130I | CCWGG | 1 cut(s) | 1091 |
| BciVI | GTATCC | 1 cut(s) | 1087 |
| BclI | TGATCA | 1 cut(s) | 751 |
| BcnI | CCSGG | 1 cut(s) | 930 |
| BcoDI | GTCTC | 3 cut(s) | 845, 1014, 1132 |
| BfaI | CTAG | 5 cut(s) | 18, 120, 669, 714, 887 |
| BfuAI | ACCTGC | 2 cut(s) | 280, 1012 |
| BfuI | GTATCC | 1 cut(s) | 1087 |
| BisI | GCNGC | 2 cut(s) | 429, 1084 |
| BlnI | CCTAGG | 1 cut(s) | 17 |
| BlpI | GCTNAGC | 1 cut(s) | 177 |
| BlsI | GCNGC | 2 cut(s) | 430, 1085 |
| Bme1390I | CCNGG | 2 cut(s) | 930, 1091 |
| Bme18I | GGWCC | 1 cut(s) | 1001 |
| BmeT110I | CYCGRG | 1 cut(s) | 1011 |
| BmgT120I | GGNCC | 4 cut(s) | 44, 45, 975, 1001 |
| BmiI | GGNNCC | 5 cut(s) | 45, 46, 141, 1054, 1266 |
| BmrFI | CCNGG | 2 cut(s) | 930, 1091 |
| BmsI | GCATC | 3 cut(s) | 550, 786, 1275 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1006, 1144 |
| BpiI | GAAGAC | 4 cut(s) | 19, 60, 272, 323 |
| Bpu10I | CCTNAGC | 1 cut(s) | 171 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 177 |
| Bpu14I | TTCGAA | 3 cut(s) | 314, 527, 721 |
| BpuMI | CCSGG | 1 cut(s) | 930 |
| BsaJI | CCNNGG | 3 cut(s) | 17, 1187, 1268 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 458, 488, 827, 857 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 124, 289, 681, 1107 |
| Bse118I | RCCGGY | 1 cut(s) | 502 |
| Bse1I | ACTGG | 3 cut(s) | 283, 951, 1258 |
| Bse3DI | GCAATG | 1 cut(s) | 773 |
| BseBI | CCWGG | 1 cut(s) | 1091 |
| BseDI | CCNNGG | 3 cut(s) | 17, 1187, 1268 |
| BseGI | GGATG | 3 cut(s) | 133, 1174, 1290 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 124, 289, 681, 1107 |
| BseMI | GCAATG | 1 cut(s) | 773 |
| BseMII | CTCAG | 3 cut(s) | 162, 168, 510 |
| BseNI | ACTGG | 3 cut(s) | 283, 951, 1258 |
| BseRI | GAGGAG | 4 cut(s) | 413, 590, 650, 755 |
| BseSI | GKGCMC | 2 cut(s) | 48, 930 |
| BseXI | GCAGC | 2 cut(s) | 415, 1095 |
| BsgI | GTGCAG | 1 cut(s) | 87 |
| Bsh1236I | CGCG | 2 cut(s) | 963, 1123 |
| BshFI | GGCC | 4 cut(s) | 46, 298, 502, 977 |
| BshNI | GGYRCC | 1 cut(s) | 1264 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1011 |
| BsiSI | CCGG | 2 cut(s) | 503, 930 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 124, 289, 681, 1107 |
| BsmAI | GTCTC | 3 cut(s) | 845, 1014, 1132 |
| BsmBI | CGTCTC | 1 cut(s) | 1014 |
| BsnI | GGCC | 4 cut(s) | 46, 298, 502, 977 |
| BsoBI | CYCGRG | 1 cut(s) | 1011 |
| Bsp119I | TTCGAA | 3 cut(s) | 314, 527, 721 |
| Bsp120I | GGGCCC | 1 cut(s) | 44 |
| Bsp1286I | GDGCHC | 3 cut(s) | 48, 183, 930 |
| Bsp143I | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 177 |
| BspACI | CCGC | 4 cut(s) | 206, 848, 1113, 1121 |
| BspANI | GGCC | 4 cut(s) | 46, 298, 502, 977 |
| BspCNI | CTCAG | 3 cut(s) | 163, 169, 511 |
| BspFNI | CGCG | 2 cut(s) | 963, 1123 |
| BspLI | GGNNCC | 5 cut(s) | 45, 46, 141, 1054, 1266 |
| BspMI | ACCTGC | 2 cut(s) | 280, 1012 |
| BspPI | GGATC | 5 cut(s) | 134, 147, 360, 856, 1228 |
| BspT104I | TTCGAA | 3 cut(s) | 314, 527, 721 |
| BspT107I | GGYRCC | 1 cut(s) | 1264 |
| BsrBI | CCGCTC | 1 cut(s) | 1113 |
| BsrDI | GCAATG | 1 cut(s) | 773 |
| BsrFI | RCCGGY | 1 cut(s) | 502 |
| BsrI | ACTGG | 3 cut(s) | 283, 951, 1258 |
| BssAI | RCCGGY | 1 cut(s) | 502 |
| BssECI | CCNNGG | 3 cut(s) | 17, 1187, 1268 |
| BssMI | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| BssT1I | CCWWGG | 3 cut(s) | 17, 1187, 1268 |
| Bst2UI | CCWGG | 1 cut(s) | 1091 |
| Bst4CI | ACNGT | 2 cut(s) | 359, 839 |
| Bst6I | CTCTTC | 3 cut(s) | 359, 428, 732 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 538, 1004 |
| BstBI | TTCGAA | 3 cut(s) | 314, 527, 721 |
| BstC8I | GCNNGC | 4 cut(s) | 273, 300, 504, 1307 |
| BstDEI | CTNAG | 4 cut(s) | 171, 177, 519, 1229 |
| BstF5I | GGATG | 3 cut(s) | 133, 1174, 1290 |
| BstFNI | CGCG | 2 cut(s) | 963, 1123 |
| BstHHI | GCGC | 1 cut(s) | 963 |
| BstKTI | GATC | 7 cut(s) | 142, 165, 355, 754, 864, 973, 1223 |
| BstMAI | GTCTC | 3 cut(s) | 845, 1014, 1132 |
| BstMBI | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 295, 538, 891, 934, 974, 1004 |
| BstNI | CCWGG | 1 cut(s) | 1091 |
| BstNSI | RCATGY | 1 cut(s) | 536 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1006, 1144 |
| BstSCI | CCNGG | 2 cut(s) | 928, 1089 |
| BstSLI | GKGCMC | 2 cut(s) | 48, 930 |
| BstUI | CGCG | 2 cut(s) | 963, 1123 |
| BstV1I | GCAGC | 2 cut(s) | 415, 1095 |
| BstV2I | GAAGAC | 4 cut(s) | 19, 60, 272, 323 |
| BstX2I | RGATCY | 2 cut(s) | 139, 861 |
| BstYI | RGATCY | 2 cut(s) | 139, 861 |
| BsuI | GTATCC | 1 cut(s) | 1087 |
| BsuRI | GGCC | 4 cut(s) | 46, 298, 502, 977 |
| BtsCI | GGATG | 3 cut(s) | 133, 1174, 1290 |
| BtsIMutI | CAGTG | 2 cut(s) | 355, 944 |
| BveI | ACCTGC | 2 cut(s) | 280, 1012 |
| Cac8I | GCNNGC | 4 cut(s) | 273, 300, 504, 1307 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1004 |
| CfoI | GCGC | 1 cut(s) | 963 |
| Cfr10I | RCCGGY | 1 cut(s) | 502 |
| Cfr13I | GGNCC | 4 cut(s) | 44, 45, 975, 1001 |
| CseI | GACGC | 3 cut(s) | 277, 291, 996 |
| Csp6I | GTAC | 2 cut(s) | 334, 880 |
| CviAII | CATG | 3 cut(s) | 533, 749, 785 |
| CviQI | GTAC | 2 cut(s) | 334, 880 |
| DdeI | CTNAG | 4 cut(s) | 171, 177, 519, 1229 |
| DpnI | GATC | 7 cut(s) | 141, 164, 354, 753, 863, 972, 1222 |
| DpnII | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| Eam1104I | CTCTTC | 3 cut(s) | 359, 428, 732 |
| EarI | CTCTTC | 3 cut(s) | 359, 428, 732 |
| EciI | GGCGGA | 1 cut(s) | 195 |
| Eco130I | CCWWGG | 3 cut(s) | 17, 1187, 1268 |
| Eco147I | AGGCCT | 1 cut(s) | 298 |
| Eco24I | GRGCYC | 2 cut(s) | 48, 183 |
| Eco47I | GGWCC | 1 cut(s) | 1001 |
| Eco88I | CYCGRG | 1 cut(s) | 1011 |
| EcoO109I | RGGNCCY | 2 cut(s) | 44, 1001 |
| EcoRI | GAATTC | 1 cut(s) | 898 |
| EcoRII | CCWGG | 1 cut(s) | 1089 |
| EcoT14I | CCWWGG | 3 cut(s) | 17, 1187, 1268 |
| EcoT38I | GRGCYC | 2 cut(s) | 48, 183 |
| ErhI | CCWWGG | 3 cut(s) | 17, 1187, 1268 |
| Esp3I | CGTCTC | 1 cut(s) | 1014 |
| FaeI | CATG | 3 cut(s) | 536, 752, 788 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 783, 815 |
| FatI | CATG | 3 cut(s) | 532, 748, 784 |
| FauI | CCCGC | 1 cut(s) | 855 |
| FbaI | TGATCA | 1 cut(s) | 751 |
| Fnu4HI | GCNGC | 2 cut(s) | 429, 1084 |
| FokI | GGATG | 3 cut(s) | 140, 1181, 1297 |
| FriOI | GRGCYC | 2 cut(s) | 48, 183 |
| Fsp4HI | GCNGC | 2 cut(s) | 429, 1084 |
| FspBI | CTAG | 5 cut(s) | 18, 120, 669, 714, 887 |
| GlaI | GCGC | 1 cut(s) | 962 |
| GluI | GCNGC | 2 cut(s) | 429, 1084 |
| HaeIII | GGCC | 4 cut(s) | 46, 298, 502, 977 |
| HapII | CCGG | 2 cut(s) | 503, 930 |
| HgaI | GACGC | 3 cut(s) | 277, 291, 996 |
| HhaI | GCGC | 1 cut(s) | 963 |
| Hin1II | CATG | 3 cut(s) | 536, 752, 788 |
| Hin6I | GCGC | 1 cut(s) | 961 |
| HinP1I | GCGC | 1 cut(s) | 961 |
| HincII | GTYRAC | 1 cut(s) | 90 |
| HindII | GTYRAC | 1 cut(s) | 90 |
| HindIII | AAGCTT | 2 cut(s) | 416, 951 |
| HinfI | GANTC | 4 cut(s) | 245, 311, 1145, 1192 |
| HpaII | CCGG | 2 cut(s) | 503, 930 |
| HphI | GGTGA | 4 cut(s) | 272, 304, 659, 1073 |
| Hpy166II | GTNNAC | 3 cut(s) | 90, 252, 650 |
| Hpy188I | TCNGA | 4 cut(s) | 261, 520, 756, 904 |
| Hpy188III | TCNNGA | 1 cut(s) | 1159 |
| Hpy8I | GTNNAC | 3 cut(s) | 90, 252, 650 |
| Hpy99I | CGWCG | 3 cut(s) | 88, 265, 307 |
| HpyAV | CCTTC | 7 cut(s) | 25, 373, 386, 457, 505, 637, 727 |
| HpyCH4III | ACNGT | 2 cut(s) | 359, 839 |
| HpyCH4V | TGCA | 8 cut(s) | 104, 289, 541, 631, 771, 784, 1018, 1179 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 295, 538, 891, 934, 974, 1004 |
| HpyF3I | CTNAG | 4 cut(s) | 171, 177, 519, 1229 |
| Hsp92II | CATG | 3 cut(s) | 536, 752, 788 |
| HspAI | GCGC | 1 cut(s) | 961 |
| KroI | GCCGGC | 1 cut(s) | 502 |
| KroNI | GCCGGC | 1 cut(s) | 504 |
| Ksp22I | TGATCA | 1 cut(s) | 751 |
| Kzo9I | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| LmnI | GCTCC | 3 cut(s) | 556, 677, 1110 |
| Lsp1109I | GCAGC | 2 cut(s) | 415, 1095 |
| LweI | GCATC | 3 cut(s) | 550, 786, 1275 |
| MaeI | CTAG | 5 cut(s) | 18, 120, 669, 714, 887 |
| MalI | GATC | 7 cut(s) | 141, 164, 354, 753, 863, 972, 1222 |
| MbiI | CCGCTC | 1 cut(s) | 1113 |
| MboI | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| MflI | RGATCY | 2 cut(s) | 139, 861 |
| MhlI | GDGCHC | 3 cut(s) | 48, 183, 930 |
| MluCI | AATT | 4 cut(s) | 49, 874, 898, 1041 |
| MlyI | GAGTC | 1 cut(s) | 1154 |
| MmeI | TCCRAC | 3 cut(s) | 284, 309, 384 |
| MroNI | GCCGGC | 1 cut(s) | 502 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1031 |
| MseI | TTAA | 1 cut(s) | 423 |
| MspI | CCGG | 2 cut(s) | 503, 930 |
| MspR9I | CCNGG | 2 cut(s) | 930, 1091 |
| MvaI | CCWGG | 1 cut(s) | 1091 |
| MvnI | CGCG | 2 cut(s) | 963, 1123 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 295, 538, 891, 934, 974, 1004 |
| NaeI | GCCGGC | 1 cut(s) | 504 |
| NciI | CCSGG | 1 cut(s) | 930 |
| NdeII | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| NgoMIV | GCCGGC | 1 cut(s) | 502 |
| NlaIII | CATG | 3 cut(s) | 536, 752, 788 |
| NlaIV | GGNNCC | 5 cut(s) | 45, 46, 141, 1054, 1266 |
| NmeAIII | GCCGAG | 1 cut(s) | 234 |
| NspI | RCATGY | 1 cut(s) | 536 |
| NspV | TTCGAA | 3 cut(s) | 314, 527, 721 |
| PaqCI | CACCTGC | 1 cut(s) | 280 |
| PceI | AGGCCT | 1 cut(s) | 298 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 71, 80, 311 |
| PdiI | GCCGGC | 1 cut(s) | 504 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1031 |
| PfeI | GAWTC | 3 cut(s) | 245, 311, 1192 |
| PkrI | GCNGC | 2 cut(s) | 430, 1085 |
| PleI | GAGTC | 1 cut(s) | 1153 |
| PpsI | GAGTC | 1 cut(s) | 1153 |
| PpuMI | RGGWCCY | 1 cut(s) | 1001 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1006, 1144 |
| PsiI | TTATAA | 1 cut(s) | 585 |
| Psp5II | RGGWCCY | 1 cut(s) | 1001 |
| Psp6I | CCWGG | 1 cut(s) | 1089 |
| PspGI | CCWGG | 1 cut(s) | 1089 |
| PspN4I | GGNNCC | 5 cut(s) | 45, 46, 141, 1054, 1266 |
| PspOMI | GGGCCC | 1 cut(s) | 44 |
| PspPI | GGNCC | 4 cut(s) | 44, 45, 975, 1001 |
| PspPPI | RGGWCCY | 1 cut(s) | 1001 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1004 |
| PsuI | RGATCY | 2 cut(s) | 139, 861 |
| RsaI | GTAC | 2 cut(s) | 335, 881 |
| RsaNI | GTAC | 2 cut(s) | 334, 880 |
| SaqAI | TTAA | 1 cut(s) | 423 |
| SatI | GCNGC | 2 cut(s) | 429, 1084 |
| Sau3AI | GATC | 7 cut(s) | 139, 162, 352, 751, 861, 970, 1220 |
| Sau96I | GGNCC | 4 cut(s) | 44, 45, 975, 1001 |
| SchI | GAGTC | 1 cut(s) | 1154 |
| ScrFI | CCNGG | 2 cut(s) | 930, 1091 |
| SduI | GDGCHC | 3 cut(s) | 48, 183, 930 |
| SfaNI | GCATC | 3 cut(s) | 550, 786, 1275 |
| SfuI | TTCGAA | 3 cut(s) | 314, 527, 721 |
| SinI | GGWCC | 1 cut(s) | 1001 |
| Sse9I | AATT | 4 cut(s) | 49, 874, 898, 1041 |
| SseBI | AGGCCT | 1 cut(s) | 298 |
| SsiI | CCGC | 4 cut(s) | 206, 848, 1113, 1121 |
| SspI | AATATT | 1 cut(s) | 1175 |
| SspMI | CTAG | 5 cut(s) | 18, 120, 669, 714, 887 |
| StuI | AGGCCT | 1 cut(s) | 298 |
| StyD4I | CCNGG | 2 cut(s) | 928, 1089 |
| StyI | CCWWGG | 3 cut(s) | 17, 1187, 1268 |
| TaaI | ACNGT | 2 cut(s) | 359, 839 |
| TaqI | TCGA | 3 cut(s) | 314, 527, 721 |
| TasI | AATT | 4 cut(s) | 49, 874, 898, 1041 |
| TatI | WGTACW | 1 cut(s) | 333 |
| TfiI | GAWTC | 3 cut(s) | 245, 311, 1192 |
| Tru1I | TTAA | 1 cut(s) | 423 |
| Tru9I | TTAA | 1 cut(s) | 423 |
| TscAI | CASTG | 2 cut(s) | 362, 951 |
| TseI | GCWGC | 2 cut(s) | 428, 1083 |
| TspDTI | ATGAA | 5 cut(s) | 51, 921, 1185, 1229, 1284 |
| TspRI | CASTG | 2 cut(s) | 362, 951 |
| VpaK11BI | GGWCC | 1 cut(s) | 1001 |
| XapI | RAATTY | 1 cut(s) | 898 |
| XceI | RCATGY | 1 cut(s) | 536 |
| XmaJI | CCTAGG | 1 cut(s) | 17 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1031 |
| XspI | CTAG | 5 cut(s) | 18, 120, 669, 714, 887 |