Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000213.1

Orthogroup ID

OG0005006

Physical Location & Seq

Genomic Coordinates Forward (+)

450491 .. 454132

Gene Structure 3642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000213.1_g000115.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ctgccgcgacccaacgttgtcctgacctatgctgtcgctgcgccctacgtcatcccgacccatgccaccgagccgcgctgctacgcacagcgtcgtgccctcctatctagcaccccccacctcgccgagtacccccaaatcgtcggtcttcaaagtccctcaatgaggcgtgccctccttgtacaaaccaccaccgtgctgaagacgtcatccgatagggtccaattctttttccccgcctttataaacccttcttggcgcttcgctcgcatcttcacctccctcaccacattttggcgggaaaatcagaaagaagcggcaaagctcagagctcaggagatcgatccgccgcaacccacatccacagccatggccgacgatcacgaccaagaagacgcggccgtcgttgaggaagagtacgccgtctggaagaagaacactccgttcctctacgacctcatcatctcccaccctctcgaatggccatctctcaccgtccactgggtcccctcggccccacagccctactccgacccgtctctcgccgttcacaagctcatcctcgggacccacacctccgacgactaccccaactacctcatggtcgccgacgccctcctccccgcatctcaacccaacgttgacgccgtttccgacgagcccactctccctaaggttgagattacgcagaagattcgggtcgatggggaagtgaatagggcaaggtgtatgctgcagaagccgaatatagttggggcgaagaccagcggtagcgaggtgtatgtgtttgattgtaccaagcaggggctgaagtctcaggatggcgagtgtgatcctgatttgaggttgaggggtcatgacaaagaagggtatggcttgtcatggagtccatttaaggagggttacctattgagtggttcaaatgattgtaaaatttgcttgtgggatgtgtctgctttggctcaagatagagtgcttcatccagtgcatgtttttgagcgtcatgaaagtgtggttaatgatgtgtcgtggcattcgaagaacgagaatctgtttgggtcttttggggacgattgtccattgatgatatgggacttgagaacaaatcaagcccaagactctgtcaaagttcatgagaaagaggtaaactatctatctttccatccgtgtaatgagtgggttttggctacagcatcttcagacactactgtgggtctgtttgatatgcggaagctgacgttaccattgcatgctctgagtggccacacagaggaggtatttcaggttgaatgggaccctaatcatgatactgtgttggcatcttatgctggtgaccgaaggttgatagtttgggaccttaacaggattggggatgagcagttggagggagatggtgatgatgggccaccagaacttctgttttcacatggcggtcataaagcaaagatttcagatttctcatggaacaaagaagttccatggctcatttcaagtgtagccgaagacaacactctccaggtctggcaaatggctgatggcatatacggtgacgatgatgggcaagaaggggaagcttctgatgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0031461 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0080008 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

CAF1C_H4-bd WD40

Protein Analysis

528

Amino Acids

59.31

Weight (kDa)

4.89

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16780 AT4G35050
fragaria_vesca	FvH4_2g01180
malus_domestica	MD05G1121700.v1.1 MD10G1124300.v1.1
prunus_persica	Prupe.8G165500_v2.0.a1
pyrus_communis	pycom05g11570
rosa_chinensis	RchiOBHm_Chr6g0251791 RchiOBHm_Chr6g0251811
rosa_laevigata	RLG00000015428 RLG00000015429
rosa_multiflora	Rmu_co8247185.1_g000001 Rmu_co8464529.1_g000001 Rmu_sc0003965.1_g000001 Rmu_sc0019305.1_g000001 Rmu_sc0025272.1_g000001 Rmu_ssc0000213.1_g000115 Rmu_ssc0000213.1_g000116
rosa_roxburghii	Rroxscaffold_7G00216370 Rroxscaffold_7G00216380
rosa_rugosa	Rorug05G0504000
rosa_samantha	Rh6AG014800 Rh6AG014900 Rh6BG013200 Rh6BG013300 Rh6CG010200 Rh6CG010300 Rh6DG011400 Rh6DG011500
rosa_wichuraiana	Rw6G001470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	245
AasI	GACNNNNNNGTC	1 cut(s)	401
AatII	GACGTC	1 cut(s)	209
AccB7I	CCANNNNNTGG	1 cut(s)	294
AccII	CGCG	3 cut(s)	7, 76, 398
AclI	AACGTT	2 cut(s)	15, 639
AclWI	GGATC	2 cut(s)	338, 827
AcoI	YGGCCR	4 cut(s)	372, 399, 482, 1261
AcsI	RAATTY	1 cut(s)	933
AcuI	CTGAAG	3 cut(s)	221, 830, 1182
AcyI	GRCGYC	3 cut(s)	206, 612, 645
AfaI	GTAC	4 cut(s)	131, 183, 419, 796
AfiI	CCNNNNNNNGG	5 cut(s)	165, 294, 501, 804, 1270
AgsI	TTSAA	4 cut(s)	152, 921, 1289, 1491
AjnI	CCWGG	1 cut(s)	1515
AleI	CACNNNNGTG	2 cut(s)	194, 1208
AluBI	AGCT	5 cut(s)	325, 332, 556, 1234, 1574
AluI	AGCT	5 cut(s)	325, 332, 556, 1234, 1574
Alw21I	GWGCWC	1 cut(s)	334
Alw26I	GTCTC	2 cut(s)	543, 819
AlwI	GGATC	2 cut(s)	338, 827
AlwNI	CAGNNNCTG	1 cut(s)	808
Ama87I	CYCGRG	1 cut(s)	563
AoxI	GGCC	6 cut(s)	372, 399, 482, 513, 1261, 1403
ApeKI	GCWGC	3 cut(s)	38, 78, 733
ApoI	RAATTY	1 cut(s)	933
ArsI	GACNNNNNNTTYG	2 cut(s)	130, 162
AspLEI	GCGC	3 cut(s)	43, 78, 261
AspS9I	GGNCC	7 cut(s)	220, 505, 514, 567, 1294, 1354, 1403
AsuHPI	GGTGA	6 cut(s)	268, 277, 484, 1343, 1406, 1559
AsuII	TTCGAA	1 cut(s)	1037
AvaI	CYCGRG	1 cut(s)	563
AvaII	GGWCC	5 cut(s)	220, 505, 567, 1294, 1354
AxyI	CCTNAGG	1 cut(s)	672
BaeGI	GKGCMC	2 cut(s)	100, 175
BalI	TGGCCA	2 cut(s)	484, 1263
BanII	GRGCYC	2 cut(s)	334, 663
BbsI	GAAGAC	5 cut(s)	140, 209, 399, 767, 1509
Bbv12I	GWGCWC	1 cut(s)	334
BbvI	GCAGC	3 cut(s)	25, 65, 720
BccI	CCATC	8 cut(s)	493, 698, 815, 1170, 1385, 1394, 1529, 1550
BceAI	ACGGC	4 cut(s)	386, 407, 530, 632
BcgI	CGANNNNNNTGC	2 cut(s)	677, 711
BciT130I	CCWGG	1 cut(s)	1517
BcoDI	GTCTC	2 cut(s)	543, 819
BfaI	CTAG	1 cut(s)	108
BfmI	CTRYAG	2 cut(s)	734, 1188
BfoI	RGCGCY	1 cut(s)	262
BisI	GCNGC	8 cut(s)	5, 39, 74, 79, 318, 350, 399, 734
BlsI	GCNGC	8 cut(s)	6, 40, 75, 80, 319, 351, 400, 735
Bme1390I	CCNGG	1 cut(s)	1517
Bme18I	GGWCC	5 cut(s)	220, 505, 567, 1294, 1354
BmeT110I	CYCGRG	1 cut(s)	563
BmgT120I	GGNCC	7 cut(s)	220, 505, 514, 567, 1294, 1354, 1403
BmiI	GGNNCC	9 cut(s)	221, 506, 507, 516, 568, 569, 1295, 1296, 1355
BmrFI	CCNGG	1 cut(s)	1517
BmrI	ACTGGG	1 cut(s)	511
BmsI	GCATC	4 cut(s)	279, 635, 1202, 1328
BmuI	ACTGGG	1 cut(s)	511
BoxI	GACNNNNGTC	1 cut(s)	1074
BpiI	GAAGAC	5 cut(s)	140, 209, 399, 767, 1509
BpmI	CTGGAG	1 cut(s)	1499
Bpu10I	CCTNAGC	1 cut(s)	333
Bpu14I	TTCGAA	1 cut(s)	1037
BpuEI	CTTGAG	2 cut(s)	948, 1117
Bsa29I	ATCGAT	1 cut(s)	342
BsaHI	GRCGYC	3 cut(s)	206, 612, 645
BsaJI	CCNNGG	4 cut(s)	369, 510, 562, 1478
Bsc4I	CCNNNNNNNGG	5 cut(s)	165, 294, 501, 804, 1270
Bse1I	ACTGG	2 cut(s)	506, 983
Bse21I	CCTNAGG	1 cut(s)	672
Bse3DI	GCAATG	1 cut(s)	1244
BseBI	CCWGG	1 cut(s)	1517
BseCI	ATCGAT	1 cut(s)	342
BseDI	CCNNGG	4 cut(s)	369, 510, 562, 1478
BseGI	GGATG	9 cut(s)	51, 209, 359, 558, 826, 952, 979, 1162, 1378
BseLI	CCNNNNNNNGG	5 cut(s)	165, 294, 501, 804, 1270
BseMI	GCAATG	1 cut(s)	1244
BseMII	CTCAG	4 cut(s)	340, 347, 830, 1247
BseNI	ACTGG	2 cut(s)	506, 983
BseRI	GAGGAG	2 cut(s)	608, 1286
BseSI	GKGCMC	2 cut(s)	100, 175
BseX3I	CGGCCG	1 cut(s)	399
BseXI	GCAGC	3 cut(s)	25, 65, 720
Bsh1236I	CGCG	3 cut(s)	7, 76, 398
Bsh1285I	CGRYCG	1 cut(s)	402
BshFI	GGCC	6 cut(s)	374, 401, 484, 515, 1263, 1405
BshVI	ATCGAT	1 cut(s)	342
BsiEI	CGRYCG	1 cut(s)	402
BsiHKAI	GWGCWC	1 cut(s)	334
BsiHKCI	CYCGRG	1 cut(s)	563
BslFI	GGGAC	7 cut(s)	141, 491, 580, 1082, 1106, 1307, 1367
BslI	CCNNNNNNNGG	5 cut(s)	165, 294, 501, 804, 1270
BsmAI	GTCTC	2 cut(s)	543, 819
BsmBI	CGTCTC	1 cut(s)	543
BsmFI	GGGAC	7 cut(s)	141, 491, 580, 1082, 1106, 1307, 1367
BsmI	GAATGC	1 cut(s)	1033
BsnI	GGCC	6 cut(s)	374, 401, 484, 515, 1263, 1405
BsoBI	CYCGRG	1 cut(s)	563
Bsp119I	TTCGAA	1 cut(s)	1037
Bsp1286I	GDGCHC	4 cut(s)	100, 175, 334, 663
Bsp1407I	TGTACA	1 cut(s)	181
Bsp143I	GATC	4 cut(s)	339, 343, 379, 832
Bsp19I	CCATGG	2 cut(s)	369, 1478
BspANI	GGCC	6 cut(s)	374, 401, 484, 515, 1263, 1405
BspCNI	CTCAG	4 cut(s)	339, 346, 829, 1248
BspDI	ATCGAT	1 cut(s)	342
BspFNI	CGCG	3 cut(s)	7, 76, 398
BspHI	TCATGA	4 cut(s)	856, 1003, 1132, 1303
BspLI	GGNNCC	9 cut(s)	221, 506, 507, 516, 568, 569, 1295, 1296, 1355
BspMAI	CTGCAG	1 cut(s)	738
BspPI	GGATC	2 cut(s)	338, 827
BspT104I	TTCGAA	1 cut(s)	1037
BsrDI	GCAATG	1 cut(s)	1244
BsrGI	TGTACA	1 cut(s)	181
BsrI	ACTGG	2 cut(s)	506, 983
BssECI	CCNNGG	4 cut(s)	369, 510, 562, 1478
BssMI	GATC	4 cut(s)	339, 343, 379, 832
BssNI	GRCGYC	3 cut(s)	206, 612, 645
BssT1I	CCWWGG	2 cut(s)	369, 1478
Bst2UI	CCWGG	1 cut(s)	1517
Bst4CI	ACNGT	5 cut(s)	196, 496, 1210, 1312, 1547
Bst6I	CTCTTC	1 cut(s)	408
BstACI	GRCGYC	3 cut(s)	206, 612, 645
BstAPI	GCANNNNNTGC	1 cut(s)	1325
BstAUI	TGTACA	1 cut(s)	181
BstBI	TTCGAA	1 cut(s)	1037
BstC8I	GCNNGC	3 cut(s)	171, 268, 1251
BstDEI	CTNAG	5 cut(s)	326, 333, 672, 816, 1256
BstDSI	CCRYGG	2 cut(s)	369, 1478
BstEII	GGTNACC	2 cut(s)	902, 1331
BstENI	CCTNNNNNAGG	1 cut(s)	163
BstF5I	GGATG	9 cut(s)	51, 209, 359, 558, 826, 952, 979, 1162, 1378
BstFNI	CGCG	3 cut(s)	7, 76, 398
BstH2I	RGCGCY	1 cut(s)	262
BstHHI	GCGC	3 cut(s)	43, 78, 261
BstKTI	GATC	4 cut(s)	342, 346, 382, 835
BstMAI	GTCTC	2 cut(s)	543, 819
BstMBI	GATC	4 cut(s)	339, 343, 379, 832
BstMCI	CGRYCG	1 cut(s)	402
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 267, 739, 1325
BstNI	CCWGG	1 cut(s)	1517
BstNSI	RCATGY	2 cut(s)	992, 1253
BstPAI	GACNNNNGTC	1 cut(s)	1074
BstPI	GGTNACC	2 cut(s)	902, 1331
BstSCI	CCNGG	1 cut(s)	1515
BstSFI	CTRYAG	2 cut(s)	734, 1188
BstSLI	GKGCMC	2 cut(s)	100, 175
BstUI	CGCG	3 cut(s)	7, 76, 398
BstV1I	GCAGC	3 cut(s)	25, 65, 720
BstV2I	GAAGAC	5 cut(s)	140, 209, 399, 767, 1509
BstXI	CCANNNNNNTGG	1 cut(s)	370
BstZI	CGGCCG	1 cut(s)	399
Bsu15I	ATCGAT	1 cut(s)	342
Bsu36I	CCTNAGG	1 cut(s)	672
BsuRI	GGCC	6 cut(s)	374, 401, 484, 515, 1263, 1405
BsuTUI	ATCGAT	1 cut(s)	342
BtgI	CCRYGG	2 cut(s)	369, 1478
BtsCI	GGATG	9 cut(s)	51, 209, 359, 558, 826, 952, 979, 1162, 1378
BtsIMutI	CAGTG	2 cut(s)	499, 990
Cac8I	GCNNGC	3 cut(s)	171, 268, 1251
CaiI	CAGNNNCTG	1 cut(s)	808
CciI	TCATGA	4 cut(s)	856, 1003, 1132, 1303
CfoI	GCGC	3 cut(s)	43, 78, 261
Cfr13I	GGNCC	7 cut(s)	220, 505, 514, 567, 1294, 1354, 1403
ClaI	ATCGAT	1 cut(s)	342
CseI	GACGC	5 cut(s)	80, 404, 620, 653, 989
Csp6I	GTAC	4 cut(s)	130, 182, 418, 795
CviQI	GTAC	4 cut(s)	130, 182, 418, 795
DdeI	CTNAG	5 cut(s)	326, 333, 672, 816, 1256
DpnI	GATC	4 cut(s)	341, 345, 381, 834
DpnII	GATC	4 cut(s)	339, 343, 379, 832
DrdI	GACNNNNNNGTC	1 cut(s)	401
DseDI	GACNNNNNNGTC	1 cut(s)	401
EaeI	YGGCCR	4 cut(s)	372, 399, 482, 1261
EagI	CGGCCG	1 cut(s)	399
Eam1104I	CTCTTC	1 cut(s)	408
EarI	CTCTTC	1 cut(s)	408
EciI	GGCGGA	1 cut(s)	336
Ecl136II	GAGCTC	1 cut(s)	332
EclXI	CGGCCG	1 cut(s)	399
Eco130I	CCWWGG	2 cut(s)	369, 1478
Eco24I	GRGCYC	2 cut(s)	334, 663
Eco47I	GGWCC	5 cut(s)	220, 505, 567, 1294, 1354
Eco52I	CGGCCG	1 cut(s)	399
Eco53kI	GAGCTC	1 cut(s)	332
Eco57I	CTGAAG	3 cut(s)	221, 830, 1182
Eco81I	CCTNAGG	1 cut(s)	672
Eco88I	CYCGRG	1 cut(s)	563
Eco91I	GGTNACC	2 cut(s)	902, 1331
EcoICRI	GAGCTC	1 cut(s)	332
EcoNI	CCTNNNNNAGG	1 cut(s)	163
EcoO109I	RGGNCCY	4 cut(s)	505, 567, 1294, 1354
EcoO65I	GGTNACC	2 cut(s)	902, 1331
EcoRII	CCWGG	1 cut(s)	1515
EcoT14I	CCWWGG	2 cut(s)	369, 1478
EcoT38I	GRGCYC	2 cut(s)	334, 663
ErhI	CCWWGG	2 cut(s)	369, 1478
Esp3I	CGTCTC	1 cut(s)	543
FaqI	GGGAC	7 cut(s)	141, 491, 580, 1082, 1106, 1307, 1367
FauI	CCCGC	3 cut(s)	244, 291, 631
Fnu4HI	GCNGC	8 cut(s)	5, 39, 74, 79, 318, 350, 399, 734
FokI	GGATG	9 cut(s)	38, 196, 346, 545, 833, 959, 966, 1149, 1385
FriOI	GRGCYC	2 cut(s)	334, 663
Fsp4HI	GCNGC	8 cut(s)	5, 39, 74, 79, 318, 350, 399, 734
FspBI	CTAG	1 cut(s)	108
GlaI	GCGC	3 cut(s)	42, 77, 260
GluI	GCNGC	8 cut(s)	5, 39, 74, 79, 318, 350, 399, 734
GsuI	CTGGAG	1 cut(s)	1499
HaeII	RGCGCY	1 cut(s)	262
HaeIII	GGCC	6 cut(s)	374, 401, 484, 515, 1263, 1405
HgaI	GACGC	5 cut(s)	80, 404, 620, 653, 989
HhaI	GCGC	3 cut(s)	43, 78, 261
Hin1I	GRCGYC	3 cut(s)	206, 612, 645
Hin6I	GCGC	3 cut(s)	41, 76, 259
HinP1I	GCGC	3 cut(s)	41, 76, 259
HincII	GTYRAC	1 cut(s)	643
HindII	GTYRAC	1 cut(s)	643
HindIII	AAGCTT	1 cut(s)	1572
HinfI	GANTC	4 cut(s)	694, 886, 1048, 1118
HphI	GGTGA	6 cut(s)	268, 277, 484, 1343, 1406, 1559
Hpy166II	GTNNAC	4 cut(s)	499, 550, 643, 1147
Hpy8I	GTNNAC	4 cut(s)	499, 550, 643, 1147
Hpy99I	CGWCG	7 cut(s)	96, 146, 380, 407, 584, 614, 659
HpyAV	CCTTC	4 cut(s)	261, 860, 1332, 1559
HpyCH4III	ACNGT	5 cut(s)	196, 496, 1210, 1312, 1547
HpyCH4IV	ACGT	5 cut(s)	15, 48, 206, 639, 1238
HpyCH4V	TGCA	3 cut(s)	736, 988, 1249
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 267, 739, 1325
HpyF3I	CTNAG	5 cut(s)	326, 333, 672, 816, 1256
HpySE526I	ACGT	5 cut(s)	15, 48, 206, 639, 1238
Hsp92I	GRCGYC	3 cut(s)	206, 612, 645
HspAI	GCGC	3 cut(s)	41, 76, 259
KflI	GGGWCCC	3 cut(s)	505, 567, 1294
Kzo9I	GATC	4 cut(s)	339, 343, 379, 832
Lsp1109I	GCAGC	3 cut(s)	25, 65, 720
LweI	GCATC	4 cut(s)	279, 635, 1202, 1328
MaeI	CTAG	1 cut(s)	108
MaeII	ACGT	5 cut(s)	15, 48, 206, 639, 1238
MaeIII	GTNAC	4 cut(s)	902, 1239, 1331, 1547
MalI	GATC	4 cut(s)	341, 345, 381, 834
MboI	GATC	4 cut(s)	339, 343, 379, 832
MhlI	GDGCHC	4 cut(s)	100, 175, 334, 663
MlsI	TGGCCA	2 cut(s)	484, 1263
MluCI	AATT	2 cut(s)	224, 933
MluNI	TGGCCA	2 cut(s)	484, 1263
MlyI	GAGTC	2 cut(s)	895, 1112
MmeI	TCCRAC	4 cut(s)	555, 603, 678, 1362
Mox20I	TGGCCA	2 cut(s)	484, 1263
MscI	TGGCCA	2 cut(s)	484, 1263
MseI	TTAA	3 cut(s)	894, 1017, 1359
MslI	CAYNNNNRTG	4 cut(s)	194, 368, 1008, 1208
Msp20I	TGGCCA	2 cut(s)	484, 1263
MspA1I	CMGCKG	1 cut(s)	768
MspR9I	CCNGG	1 cut(s)	1517
Mva1269I	GAATGC	1 cut(s)	1033
MvaI	CCWGG	1 cut(s)	1517
MvnI	CGCG	3 cut(s)	7, 76, 398
MwoI	GCNNNNNNNGC	4 cut(s)	38, 267, 739, 1325
NcoI	CCATGG	2 cut(s)	369, 1478
NdeII	GATC	4 cut(s)	339, 343, 379, 832
NlaIV	GGNNCC	9 cut(s)	221, 506, 507, 516, 568, 569, 1295, 1296, 1355
NmeAIII	GCCGAG	2 cut(s)	151, 491
NmuCI	GTSAC	2 cut(s)	1331, 1547
NspI	RCATGY	2 cut(s)	992, 1253
NspV	TTCGAA	1 cut(s)	1037
OliI	CACNNNNGTG	2 cut(s)	194, 1208
PaeI	GCATGC	1 cut(s)	1253
PagI	TCATGA	4 cut(s)	856, 1003, 1132, 1303
PcsI	WCGNNNNNNNCGW	4 cut(s)	402, 645, 651, 1034
PctI	GAATGC	1 cut(s)	1033
PfeI	GAWTC	2 cut(s)	694, 1048
PflFI	GACNNNGTC	1 cut(s)	1121
PflMI	CCANNNNNTGG	1 cut(s)	294
PkrI	GCNGC	8 cut(s)	6, 40, 75, 80, 319, 351, 400, 735
PleI	GAGTC	2 cut(s)	894, 1112
PpsI	GAGTC	2 cut(s)	894, 1112
PpuMI	RGGWCCY	4 cut(s)	505, 567, 1294, 1354
PshAI	GACNNNNGTC	1 cut(s)	1074
PsiI	TTATAA	1 cut(s)	245
Psp124BI	GAGCTC	1 cut(s)	334
Psp1406I	AACGTT	2 cut(s)	15, 639
Psp5II	RGGWCCY	4 cut(s)	505, 567, 1294, 1354
Psp6I	CCWGG	1 cut(s)	1515
PspEI	GGTNACC	2 cut(s)	902, 1331
PspGI	CCWGG	1 cut(s)	1515
PspN4I	GGNNCC	9 cut(s)	221, 506, 507, 516, 568, 569, 1295, 1296, 1355
PspPI	GGNCC	7 cut(s)	220, 505, 514, 567, 1294, 1354, 1403
PspPPI	RGGWCCY	4 cut(s)	505, 567, 1294, 1354
PstI	CTGCAG	1 cut(s)	738
PstNI	CAGNNNCTG	1 cut(s)	808
PsyI	GACNNNGTC	1 cut(s)	1121
RsaI	GTAC	4 cut(s)	131, 183, 419, 796
RsaNI	GTAC	4 cut(s)	130, 182, 418, 795
RseI	CAYNNNNRTG	4 cut(s)	194, 368, 1008, 1208
SacI	GAGCTC	1 cut(s)	334
SaqAI	TTAA	3 cut(s)	894, 1017, 1359
SatI	GCNGC	8 cut(s)	5, 39, 74, 79, 318, 350, 399, 734
Sau3AI	GATC	4 cut(s)	339, 343, 379, 832
Sau96I	GGNCC	7 cut(s)	220, 505, 514, 567, 1294, 1354, 1403
SchI	GAGTC	2 cut(s)	895, 1112
ScrFI	CCNGG	1 cut(s)	1517
SduI	GDGCHC	4 cut(s)	100, 175, 334, 663
SfaNI	GCATC	4 cut(s)	279, 635, 1202, 1328
SfcI	CTRYAG	2 cut(s)	734, 1188
SfuI	TTCGAA	1 cut(s)	1037
SinI	GGWCC	5 cut(s)	220, 505, 567, 1294, 1354
SmiMI	CAYNNNNRTG	4 cut(s)	194, 368, 1008, 1208
SmlI	CTYRAG	2 cut(s)	963, 1096
SmoI	CTYRAG	2 cut(s)	963, 1096
SphI	GCATGC	1 cut(s)	1253
Sse9I	AATT	2 cut(s)	224, 933
SspMI	CTAG	1 cut(s)	108
SstI	GAGCTC	1 cut(s)	334
StyD4I	CCNGG	1 cut(s)	1515
StyI	CCWWGG	2 cut(s)	369, 1478
TaaI	ACNGT	5 cut(s)	196, 496, 1210, 1312, 1547
TaiI	ACGT	5 cut(s)	18, 51, 209, 642, 1241
TaqI	TCGA	4 cut(s)	342, 477, 702, 1037
TaqII	GACCGA	2 cut(s)	134, 1350
TasI	AATT	2 cut(s)	224, 933
TatI	WGTACW	1 cut(s)	181
TauI	GCSGC	5 cut(s)	7, 76, 320, 352, 401
TfiI	GAWTC	2 cut(s)	694, 1048
Tru1I	TTAA	3 cut(s)	894, 1017, 1359
Tru9I	TTAA	3 cut(s)	894, 1017, 1359
TscAI	CASTG	2 cut(s)	506, 990
TseFI	GTSAC	2 cut(s)	1331, 1547
TseI	GCWGC	3 cut(s)	38, 78, 733
Tsp45I	GTSAC	2 cut(s)	1331, 1547
TspDTI	ATGAA	3 cut(s)	968, 1020, 1121
TspGWI	ACGGA	2 cut(s)	432, 1155
TspRI	CASTG	2 cut(s)	506, 990
Tth111I	GACNNNGTC	1 cut(s)	1121
Van91I	CCANNNNNTGG	1 cut(s)	294
VpaK11BI	GGWCC	5 cut(s)	220, 505, 567, 1294, 1354
XagI	CCTNNNNNAGG	1 cut(s)	163
XapI	RAATTY	1 cut(s)	933
XceI	RCATGY	2 cut(s)	992, 1253
XcmI	CCANNNNNNNNNTGG	2 cut(s)	598, 1086
XspI	CTAG	1 cut(s)	108
ZraI	GACGTC	1 cut(s)	207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.