Rmu_ssc0000213.1_g000115

WD-40 repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000213.1
OG0005006
Physical Location & Seq
Forward (+)
450491 .. 454132
3642 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1587 bp
ctgccgcgacccaacgttgtcctgacctatgctgtcgctgcgccctacgtcatcccgacccatgccaccgagccgcgctgctacgcacagcgtcgtgccctcctatctagcaccccccacctcgccgagtacccccaaatcgtcggtcttcaaagtccctcaatgaggcgtgccctccttgtacaaaccaccaccgtgctgaagacgtcatccgatagggtccaattctttttccccgcctttataaacccttcttggcgcttcgctcgcatcttcacctccctcaccacattttggcgggaaaatcagaaagaagcggcaaagctcagagctcaggagatcgatccgccgcaacccacatccacagccatggccgacgatcacgaccaagaagacgcggccgtcgttgaggaagagtacgccgtctggaagaagaacactccgttcctctacgacctcatcatctcccaccctctcgaatggccatctctcaccgtccactgggtcccctcggccccacagccctactccgacccgtctctcgccgttcacaagctcatcctcgggacccacacctccgacgactaccccaactacctcatggtcgccgacgccctcctccccgcatctcaacccaacgttgacgccgtttccgacgagcccactctccctaaggttgagattacgcagaagattcgggtcgatggggaagtgaatagggcaaggtgtatgctgcagaagccgaatatagttggggcgaagaccagcggtagcgaggtgtatgtgtttgattgtaccaagcaggggctgaagtctcaggatggcgagtgtgatcctgatttgaggttgaggggtcatgacaaagaagggtatggcttgtcatggagtccatttaaggagggttacctattgagtggttcaaatgattgtaaaatttgcttgtgggatgtgtctgctttggctcaagatagagtgcttcatccagtgcatgtttttgagcgtcatgaaagtgtggttaatgatgtgtcgtggcattcgaagaacgagaatctgtttgggtcttttggggacgattgtccattgatgatatgggacttgagaacaaatcaagcccaagactctgtcaaagttcatgagaaagaggtaaactatctatctttccatccgtgtaatgagtgggttttggctacagcatcttcagacactactgtgggtctgtttgatatgcggaagctgacgttaccattgcatgctctgagtggccacacagaggaggtatttcaggttgaatgggaccctaatcatgatactgtgttggcatcttatgctggtgaccgaaggttgatagtttgggaccttaacaggattggggatgagcagttggagggagatggtgatgatgggccaccagaacttctgttttcacatggcggtcataaagcaaagatttcagatttctcatggaacaaagaagttccatggctcatttcaagtgtagccgaagacaacactctccaggtctggcaaatggctgatggcatatacggtgacgatgatgggcaagaaggggaagcttctgatgtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0031461 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0080008 GO:1902494 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko04218 map04218
Pfam Domains
Protein Families
CAF1C_H4-bd WD40

Protein Analysis

528

Amino Acids

59.31

Weight (kDa)

4.89

Isoelectric Point (pI)

40.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAF1C_H4-bd PF12265 138 - 208 2.9e-25 Histone-binding protein RBBP4 or subunit C of CAF1 complex
WD40_CDC20-Fz PF24807 234 - 369 7.9e-12 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 258 - 408 5.7e-14 WDR3 first beta-propeller domain
WD40_Gbeta PF25391 265 - 410 2.1e-08 G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd PF25047 268 - 456 2.9e-11 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 283 - 388 1e-10 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 286 - 392 1.5e-13 THOC3 beta-propeller domain
Beta-prop_EML_2 PF23414 291 - 456 6.2e-12 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_Aladin PF25460 292 - 401 7.4e-07 Aladin seven-bladed propeller
WD40_Prp19 PF24814 295 - 411 2.5e-13 Prp19 WD40 domain
WDR55 PF24796 306 - 454 8.8e-09 WDR55
EIF3I PF24805 308 - 413 6.5e-07 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 331 - 411 3.9e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 334 - 454 2.2e-16 WDR5 beta-propeller domain
Beta-prop_EIPR1 PF23609 335 - 407 1.4e-07 EIPR1 beta-propeller
Beta-prop_TEP1_2nd PF25047 358 - 511 2.7e-06 TEP-1 second beta-propeller
Beta-prop_EIPR1 PF23609 361 - 451 1.5e-08 EIPR1 beta-propeller
Beta-prop_WDR3_1st PF25173 362 - 511 1.2e-14 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 378 - 454 1.1e-12 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 245
AasI GACNNNNNNGTC 1 cut(s) 401
AatII GACGTC 1 cut(s) 209
AccB7I CCANNNNNTGG 1 cut(s) 294
AccII CGCG 3 cut(s) 7, 76, 398
AclI AACGTT 2 cut(s) 15, 639
AclWI GGATC 2 cut(s) 338, 827
AcoI YGGCCR 4 cut(s) 372, 399, 482, 1261
AcsI RAATTY 1 cut(s) 933
AcuI CTGAAG 3 cut(s) 221, 830, 1182
AcyI GRCGYC 3 cut(s) 206, 612, 645
AfaI GTAC 4 cut(s) 131, 183, 419, 796
AfiI CCNNNNNNNGG 5 cut(s) 165, 294, 501, 804, 1270
AgsI TTSAA 4 cut(s) 152, 921, 1289, 1491
AjnI CCWGG 1 cut(s) 1515
AleI CACNNNNGTG 2 cut(s) 194, 1208
AluBI AGCT 5 cut(s) 325, 332, 556, 1234, 1574
AluI AGCT 5 cut(s) 325, 332, 556, 1234, 1574
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 2 cut(s) 543, 819
AlwI GGATC 2 cut(s) 338, 827
AlwNI CAGNNNCTG 1 cut(s) 808
Ama87I CYCGRG 1 cut(s) 563
AoxI GGCC 6 cut(s) 372, 399, 482, 513, 1261, 1403
ApeKI GCWGC 3 cut(s) 38, 78, 733
ApoI RAATTY 1 cut(s) 933
ArsI GACNNNNNNTTYG 2 cut(s) 130, 162
AspLEI GCGC 3 cut(s) 43, 78, 261
AspS9I GGNCC 7 cut(s) 220, 505, 514, 567, 1294, 1354, 1403
AsuHPI GGTGA 6 cut(s) 268, 277, 484, 1343, 1406, 1559
AsuII TTCGAA 1 cut(s) 1037
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 5 cut(s) 220, 505, 567, 1294, 1354
AxyI CCTNAGG 1 cut(s) 672
BaeGI GKGCMC 2 cut(s) 100, 175
BalI TGGCCA 2 cut(s) 484, 1263
BanII GRGCYC 2 cut(s) 334, 663
BbsI GAAGAC 5 cut(s) 140, 209, 399, 767, 1509
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 3 cut(s) 25, 65, 720
BccI CCATC 8 cut(s) 493, 698, 815, 1170, 1385, 1394, 1529, 1550
BceAI ACGGC 4 cut(s) 386, 407, 530, 632
BcgI CGANNNNNNTGC 2 cut(s) 677, 711
BciT130I CCWGG 1 cut(s) 1517
BcoDI GTCTC 2 cut(s) 543, 819
BfaI CTAG 1 cut(s) 108
BfmI CTRYAG 2 cut(s) 734, 1188
BfoI RGCGCY 1 cut(s) 262
BisI GCNGC 8 cut(s) 5, 39, 74, 79, 318, 350, 399, 734
BlsI GCNGC 8 cut(s) 6, 40, 75, 80, 319, 351, 400, 735
Bme1390I CCNGG 1 cut(s) 1517
Bme18I GGWCC 5 cut(s) 220, 505, 567, 1294, 1354
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 7 cut(s) 220, 505, 514, 567, 1294, 1354, 1403
BmiI GGNNCC 9 cut(s) 221, 506, 507, 516, 568, 569, 1295, 1296, 1355
BmrFI CCNGG 1 cut(s) 1517
BmrI ACTGGG 1 cut(s) 511
BmsI GCATC 4 cut(s) 279, 635, 1202, 1328
BmuI ACTGGG 1 cut(s) 511
BoxI GACNNNNGTC 1 cut(s) 1074
BpiI GAAGAC 5 cut(s) 140, 209, 399, 767, 1509
BpmI CTGGAG 1 cut(s) 1499
Bpu10I CCTNAGC 1 cut(s) 333
Bpu14I TTCGAA 1 cut(s) 1037
BpuEI CTTGAG 2 cut(s) 948, 1117
Bsa29I ATCGAT 1 cut(s) 342
BsaHI GRCGYC 3 cut(s) 206, 612, 645
BsaJI CCNNGG 4 cut(s) 369, 510, 562, 1478
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 294, 501, 804, 1270
Bse1I ACTGG 2 cut(s) 506, 983
Bse21I CCTNAGG 1 cut(s) 672
Bse3DI GCAATG 1 cut(s) 1244
BseBI CCWGG 1 cut(s) 1517
BseCI ATCGAT 1 cut(s) 342
BseDI CCNNGG 4 cut(s) 369, 510, 562, 1478
BseGI GGATG 9 cut(s) 51, 209, 359, 558, 826, 952, 979, 1162, 1378
BseLI CCNNNNNNNGG 5 cut(s) 165, 294, 501, 804, 1270
BseMI GCAATG 1 cut(s) 1244
BseMII CTCAG 4 cut(s) 340, 347, 830, 1247
BseNI ACTGG 2 cut(s) 506, 983
BseRI GAGGAG 2 cut(s) 608, 1286
BseSI GKGCMC 2 cut(s) 100, 175
BseX3I CGGCCG 1 cut(s) 399
BseXI GCAGC 3 cut(s) 25, 65, 720
Bsh1236I CGCG 3 cut(s) 7, 76, 398
Bsh1285I CGRYCG 1 cut(s) 402
BshFI GGCC 6 cut(s) 374, 401, 484, 515, 1263, 1405
BshVI ATCGAT 1 cut(s) 342
BsiEI CGRYCG 1 cut(s) 402
BsiHKAI GWGCWC 1 cut(s) 334
BsiHKCI CYCGRG 1 cut(s) 563
BslFI GGGAC 7 cut(s) 141, 491, 580, 1082, 1106, 1307, 1367
BslI CCNNNNNNNGG 5 cut(s) 165, 294, 501, 804, 1270
BsmAI GTCTC 2 cut(s) 543, 819
BsmBI CGTCTC 1 cut(s) 543
BsmFI GGGAC 7 cut(s) 141, 491, 580, 1082, 1106, 1307, 1367
BsmI GAATGC 1 cut(s) 1033
BsnI GGCC 6 cut(s) 374, 401, 484, 515, 1263, 1405
BsoBI CYCGRG 1 cut(s) 563
Bsp119I TTCGAA 1 cut(s) 1037
Bsp1286I GDGCHC 4 cut(s) 100, 175, 334, 663
Bsp1407I TGTACA 1 cut(s) 181
Bsp143I GATC 4 cut(s) 339, 343, 379, 832
Bsp19I CCATGG 2 cut(s) 369, 1478
BspANI GGCC 6 cut(s) 374, 401, 484, 515, 1263, 1405
BspCNI CTCAG 4 cut(s) 339, 346, 829, 1248
BspDI ATCGAT 1 cut(s) 342
BspFNI CGCG 3 cut(s) 7, 76, 398
BspHI TCATGA 4 cut(s) 856, 1003, 1132, 1303
BspLI GGNNCC 9 cut(s) 221, 506, 507, 516, 568, 569, 1295, 1296, 1355
BspMAI CTGCAG 1 cut(s) 738
BspPI GGATC 2 cut(s) 338, 827
BspT104I TTCGAA 1 cut(s) 1037
BsrDI GCAATG 1 cut(s) 1244
BsrGI TGTACA 1 cut(s) 181
BsrI ACTGG 2 cut(s) 506, 983
BssECI CCNNGG 4 cut(s) 369, 510, 562, 1478
BssMI GATC 4 cut(s) 339, 343, 379, 832
BssNI GRCGYC 3 cut(s) 206, 612, 645
BssT1I CCWWGG 2 cut(s) 369, 1478
Bst2UI CCWGG 1 cut(s) 1517
Bst4CI ACNGT 5 cut(s) 196, 496, 1210, 1312, 1547
Bst6I CTCTTC 1 cut(s) 408
BstACI GRCGYC 3 cut(s) 206, 612, 645
BstAPI GCANNNNNTGC 1 cut(s) 1325
BstAUI TGTACA 1 cut(s) 181
BstBI TTCGAA 1 cut(s) 1037
BstC8I GCNNGC 3 cut(s) 171, 268, 1251
BstDEI CTNAG 5 cut(s) 326, 333, 672, 816, 1256
BstDSI CCRYGG 2 cut(s) 369, 1478
BstEII GGTNACC 2 cut(s) 902, 1331
BstENI CCTNNNNNAGG 1 cut(s) 163
BstF5I GGATG 9 cut(s) 51, 209, 359, 558, 826, 952, 979, 1162, 1378
BstFNI CGCG 3 cut(s) 7, 76, 398
BstH2I RGCGCY 1 cut(s) 262
BstHHI GCGC 3 cut(s) 43, 78, 261
BstKTI GATC 4 cut(s) 342, 346, 382, 835
BstMAI GTCTC 2 cut(s) 543, 819
BstMBI GATC 4 cut(s) 339, 343, 379, 832
BstMCI CGRYCG 1 cut(s) 402
BstMWI GCNNNNNNNGC 4 cut(s) 38, 267, 739, 1325
BstNI CCWGG 1 cut(s) 1517
BstNSI RCATGY 2 cut(s) 992, 1253
BstPAI GACNNNNGTC 1 cut(s) 1074
BstPI GGTNACC 2 cut(s) 902, 1331
BstSCI CCNGG 1 cut(s) 1515
BstSFI CTRYAG 2 cut(s) 734, 1188
BstSLI GKGCMC 2 cut(s) 100, 175
BstUI CGCG 3 cut(s) 7, 76, 398
BstV1I GCAGC 3 cut(s) 25, 65, 720
BstV2I GAAGAC 5 cut(s) 140, 209, 399, 767, 1509
BstXI CCANNNNNNTGG 1 cut(s) 370
BstZI CGGCCG 1 cut(s) 399
Bsu15I ATCGAT 1 cut(s) 342
Bsu36I CCTNAGG 1 cut(s) 672
BsuRI GGCC 6 cut(s) 374, 401, 484, 515, 1263, 1405
BsuTUI ATCGAT 1 cut(s) 342
BtgI CCRYGG 2 cut(s) 369, 1478
BtsCI GGATG 9 cut(s) 51, 209, 359, 558, 826, 952, 979, 1162, 1378
BtsIMutI CAGTG 2 cut(s) 499, 990
Cac8I GCNNGC 3 cut(s) 171, 268, 1251
CaiI CAGNNNCTG 1 cut(s) 808
CciI TCATGA 4 cut(s) 856, 1003, 1132, 1303
CfoI GCGC 3 cut(s) 43, 78, 261
Cfr13I GGNCC 7 cut(s) 220, 505, 514, 567, 1294, 1354, 1403
ClaI ATCGAT 1 cut(s) 342
CseI GACGC 5 cut(s) 80, 404, 620, 653, 989
Csp6I GTAC 4 cut(s) 130, 182, 418, 795
CviQI GTAC 4 cut(s) 130, 182, 418, 795
DdeI CTNAG 5 cut(s) 326, 333, 672, 816, 1256
DpnI GATC 4 cut(s) 341, 345, 381, 834
DpnII GATC 4 cut(s) 339, 343, 379, 832
DrdI GACNNNNNNGTC 1 cut(s) 401
DseDI GACNNNNNNGTC 1 cut(s) 401
EaeI YGGCCR 4 cut(s) 372, 399, 482, 1261
EagI CGGCCG 1 cut(s) 399
Eam1104I CTCTTC 1 cut(s) 408
EarI CTCTTC 1 cut(s) 408
EciI GGCGGA 1 cut(s) 336
Ecl136II GAGCTC 1 cut(s) 332
EclXI CGGCCG 1 cut(s) 399
Eco130I CCWWGG 2 cut(s) 369, 1478
Eco24I GRGCYC 2 cut(s) 334, 663
Eco47I GGWCC 5 cut(s) 220, 505, 567, 1294, 1354
Eco52I CGGCCG 1 cut(s) 399
Eco53kI GAGCTC 1 cut(s) 332
Eco57I CTGAAG 3 cut(s) 221, 830, 1182
Eco81I CCTNAGG 1 cut(s) 672
Eco88I CYCGRG 1 cut(s) 563
Eco91I GGTNACC 2 cut(s) 902, 1331
EcoICRI GAGCTC 1 cut(s) 332
EcoNI CCTNNNNNAGG 1 cut(s) 163
EcoO109I RGGNCCY 4 cut(s) 505, 567, 1294, 1354
EcoO65I GGTNACC 2 cut(s) 902, 1331
EcoRII CCWGG 1 cut(s) 1515
EcoT14I CCWWGG 2 cut(s) 369, 1478
EcoT38I GRGCYC 2 cut(s) 334, 663
ErhI CCWWGG 2 cut(s) 369, 1478
Esp3I CGTCTC 1 cut(s) 543
FaqI GGGAC 7 cut(s) 141, 491, 580, 1082, 1106, 1307, 1367
FauI CCCGC 3 cut(s) 244, 291, 631
Fnu4HI GCNGC 8 cut(s) 5, 39, 74, 79, 318, 350, 399, 734
FokI GGATG 9 cut(s) 38, 196, 346, 545, 833, 959, 966, 1149, 1385
FriOI GRGCYC 2 cut(s) 334, 663
Fsp4HI GCNGC 8 cut(s) 5, 39, 74, 79, 318, 350, 399, 734
FspBI CTAG 1 cut(s) 108
GlaI GCGC 3 cut(s) 42, 77, 260
GluI GCNGC 8 cut(s) 5, 39, 74, 79, 318, 350, 399, 734
GsuI CTGGAG 1 cut(s) 1499
HaeII RGCGCY 1 cut(s) 262
HaeIII GGCC 6 cut(s) 374, 401, 484, 515, 1263, 1405
HgaI GACGC 5 cut(s) 80, 404, 620, 653, 989
HhaI GCGC 3 cut(s) 43, 78, 261
Hin1I GRCGYC 3 cut(s) 206, 612, 645
Hin6I GCGC 3 cut(s) 41, 76, 259
HinP1I GCGC 3 cut(s) 41, 76, 259
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 1 cut(s) 1572
HinfI GANTC 4 cut(s) 694, 886, 1048, 1118
HphI GGTGA 6 cut(s) 268, 277, 484, 1343, 1406, 1559
Hpy166II GTNNAC 4 cut(s) 499, 550, 643, 1147
Hpy8I GTNNAC 4 cut(s) 499, 550, 643, 1147
Hpy99I CGWCG 7 cut(s) 96, 146, 380, 407, 584, 614, 659
HpyAV CCTTC 4 cut(s) 261, 860, 1332, 1559
HpyCH4III ACNGT 5 cut(s) 196, 496, 1210, 1312, 1547
HpyCH4IV ACGT 5 cut(s) 15, 48, 206, 639, 1238
HpyCH4V TGCA 3 cut(s) 736, 988, 1249
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 267, 739, 1325
HpyF3I CTNAG 5 cut(s) 326, 333, 672, 816, 1256
HpySE526I ACGT 5 cut(s) 15, 48, 206, 639, 1238
Hsp92I GRCGYC 3 cut(s) 206, 612, 645
HspAI GCGC 3 cut(s) 41, 76, 259
KflI GGGWCCC 3 cut(s) 505, 567, 1294
Kzo9I GATC 4 cut(s) 339, 343, 379, 832
Lsp1109I GCAGC 3 cut(s) 25, 65, 720
LweI GCATC 4 cut(s) 279, 635, 1202, 1328
MaeI CTAG 1 cut(s) 108
MaeII ACGT 5 cut(s) 15, 48, 206, 639, 1238
MaeIII GTNAC 4 cut(s) 902, 1239, 1331, 1547
MalI GATC 4 cut(s) 341, 345, 381, 834
MboI GATC 4 cut(s) 339, 343, 379, 832
MhlI GDGCHC 4 cut(s) 100, 175, 334, 663
MlsI TGGCCA 2 cut(s) 484, 1263
MluCI AATT 2 cut(s) 224, 933
MluNI TGGCCA 2 cut(s) 484, 1263
MlyI GAGTC 2 cut(s) 895, 1112
MmeI TCCRAC 4 cut(s) 555, 603, 678, 1362
Mox20I TGGCCA 2 cut(s) 484, 1263
MscI TGGCCA 2 cut(s) 484, 1263
MseI TTAA 3 cut(s) 894, 1017, 1359
MslI CAYNNNNRTG 4 cut(s) 194, 368, 1008, 1208
Msp20I TGGCCA 2 cut(s) 484, 1263
MspA1I CMGCKG 1 cut(s) 768
MspR9I CCNGG 1 cut(s) 1517
Mva1269I GAATGC 1 cut(s) 1033
MvaI CCWGG 1 cut(s) 1517
MvnI CGCG 3 cut(s) 7, 76, 398
MwoI GCNNNNNNNGC 4 cut(s) 38, 267, 739, 1325
NcoI CCATGG 2 cut(s) 369, 1478
NdeII GATC 4 cut(s) 339, 343, 379, 832
NlaIV GGNNCC 9 cut(s) 221, 506, 507, 516, 568, 569, 1295, 1296, 1355
NmeAIII GCCGAG 2 cut(s) 151, 491
NmuCI GTSAC 2 cut(s) 1331, 1547
NspI RCATGY 2 cut(s) 992, 1253
NspV TTCGAA 1 cut(s) 1037
OliI CACNNNNGTG 2 cut(s) 194, 1208
PaeI GCATGC 1 cut(s) 1253
PagI TCATGA 4 cut(s) 856, 1003, 1132, 1303
PcsI WCGNNNNNNNCGW 4 cut(s) 402, 645, 651, 1034
PctI GAATGC 1 cut(s) 1033
PfeI GAWTC 2 cut(s) 694, 1048
PflFI GACNNNGTC 1 cut(s) 1121
PflMI CCANNNNNTGG 1 cut(s) 294
PkrI GCNGC 8 cut(s) 6, 40, 75, 80, 319, 351, 400, 735
PleI GAGTC 2 cut(s) 894, 1112
PpsI GAGTC 2 cut(s) 894, 1112
PpuMI RGGWCCY 4 cut(s) 505, 567, 1294, 1354
PshAI GACNNNNGTC 1 cut(s) 1074
PsiI TTATAA 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 334
Psp1406I AACGTT 2 cut(s) 15, 639
Psp5II RGGWCCY 4 cut(s) 505, 567, 1294, 1354
Psp6I CCWGG 1 cut(s) 1515
PspEI GGTNACC 2 cut(s) 902, 1331
PspGI CCWGG 1 cut(s) 1515
PspN4I GGNNCC 9 cut(s) 221, 506, 507, 516, 568, 569, 1295, 1296, 1355
PspPI GGNCC 7 cut(s) 220, 505, 514, 567, 1294, 1354, 1403
PspPPI RGGWCCY 4 cut(s) 505, 567, 1294, 1354
PstI CTGCAG 1 cut(s) 738
PstNI CAGNNNCTG 1 cut(s) 808
PsyI GACNNNGTC 1 cut(s) 1121
RsaI GTAC 4 cut(s) 131, 183, 419, 796
RsaNI GTAC 4 cut(s) 130, 182, 418, 795
RseI CAYNNNNRTG 4 cut(s) 194, 368, 1008, 1208
SacI GAGCTC 1 cut(s) 334
SaqAI TTAA 3 cut(s) 894, 1017, 1359
SatI GCNGC 8 cut(s) 5, 39, 74, 79, 318, 350, 399, 734
Sau3AI GATC 4 cut(s) 339, 343, 379, 832
Sau96I GGNCC 7 cut(s) 220, 505, 514, 567, 1294, 1354, 1403
SchI GAGTC 2 cut(s) 895, 1112
ScrFI CCNGG 1 cut(s) 1517
SduI GDGCHC 4 cut(s) 100, 175, 334, 663
SfaNI GCATC 4 cut(s) 279, 635, 1202, 1328
SfcI CTRYAG 2 cut(s) 734, 1188
SfuI TTCGAA 1 cut(s) 1037
SinI GGWCC 5 cut(s) 220, 505, 567, 1294, 1354
SmiMI CAYNNNNRTG 4 cut(s) 194, 368, 1008, 1208
SmlI CTYRAG 2 cut(s) 963, 1096
SmoI CTYRAG 2 cut(s) 963, 1096
SphI GCATGC 1 cut(s) 1253
Sse9I AATT 2 cut(s) 224, 933
SspMI CTAG 1 cut(s) 108
SstI GAGCTC 1 cut(s) 334
StyD4I CCNGG 1 cut(s) 1515
StyI CCWWGG 2 cut(s) 369, 1478
TaaI ACNGT 5 cut(s) 196, 496, 1210, 1312, 1547
TaiI ACGT 5 cut(s) 18, 51, 209, 642, 1241
TaqI TCGA 4 cut(s) 342, 477, 702, 1037
TaqII GACCGA 2 cut(s) 134, 1350
TasI AATT 2 cut(s) 224, 933
TatI WGTACW 1 cut(s) 181
TauI GCSGC 5 cut(s) 7, 76, 320, 352, 401
TfiI GAWTC 2 cut(s) 694, 1048
Tru1I TTAA 3 cut(s) 894, 1017, 1359
Tru9I TTAA 3 cut(s) 894, 1017, 1359
TscAI CASTG 2 cut(s) 506, 990
TseFI GTSAC 2 cut(s) 1331, 1547
TseI GCWGC 3 cut(s) 38, 78, 733
Tsp45I GTSAC 2 cut(s) 1331, 1547
TspDTI ATGAA 3 cut(s) 968, 1020, 1121
TspGWI ACGGA 2 cut(s) 432, 1155
TspRI CASTG 2 cut(s) 506, 990
Tth111I GACNNNGTC 1 cut(s) 1121
Van91I CCANNNNNTGG 1 cut(s) 294
VpaK11BI GGWCC 5 cut(s) 220, 505, 567, 1294, 1354
XagI CCTNNNNNAGG 1 cut(s) 163
XapI RAATTY 1 cut(s) 933
XceI RCATGY 2 cut(s) 992, 1253
XcmI CCANNNNNNNNNTGG 2 cut(s) 598, 1086
XspI CTAG 1 cut(s) 108
ZraI GACGTC 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.