Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003046

Physical Location & Seq

Genomic Coordinates Reverse (-)

5226177 .. 5233574

Gene Structure 7398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00003930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGGGAACGATCGGCCGTGCACCGCCGGAAAAGTCGTTTTCCGCCGGGTCGGGTCGAAAGGATCCGAGGTGGCTTCGATCCATACTTGGAGGCGGCGGCGGTGCAAGGGAGCACCGGGGGCGGCGTGGGCGGCTTGGTCCGAGCTCGAGAGGCCGGGTCGCCGGCGGAGGTGACCGGAGGAAGGAGAAAAAGTCGGACTTGTCCGAAAGACCTTGGAAGACTTCAGATGCTAGACTTGTGCTTGAAGATGGTTCAATATGGAGAGCAAAGTCATTTGGTGCTTCAGGAACCCAAGTTGGTGAAGTTGTATTCAATACATCCTTGACCGGGTATCAAGAAATTATTACAGACCCGAGTTATGCTGGCCAATTTGACCTGATGACAAACCCCCAAATTGGAAATACTGGTGTAAATTTTGATGATGAAGAATCAAGGCAGTGCTTCCTTGGTGGTCTAGTGATCAGAAGTTTAAGTATCAGTACTTCAAATTATAGATGTGCAGAAACTCTTGGTGATTATTTGGCAAAAAGGAATATCATGGGAATTTGCTATCACCCGCAGATTAAGGCAAGATGGAAGCCTTATTGGTTTTTGAGCACAGAAGAGACCAAAACAGATGAGGAACTATTGGAAATGTCTCGTTCATGGGACATTGTTGGGGTTGATTTAATAAGTGGCGTGTCATGCAAGACCCCTCATGAGTGGGTTGATAAAACCAATTCTGAGTGGGAATTTATGTCCAAAAGAAAAGATGGAGAGGCTTTTCGTGTAAGTTATGATTTTGGAATCAAGAGCAACATACTTAGGCCATTGGCTTCCTATGGCTGCAAAATTACTGTGGTACCTTCAACATGGCCAGCAGCAGAGACTCTTAAGATGAAACCAGATGGGGTCCTTTTCAGCAATGGCCCAGGAGACCCATCTGCAGTTCCCTATGCTGTTGAAACGGTCAAGCAGATTCTTGGAAAGGTTCCTGTTTTTGGAATTTGCATGGGCCATCAGTTGCATGCGGTTGAAAAGTCAGTGACCAAAGTGTCGAACAGTCAAAGTTCAATGACCATTTGTGATATTCTCCCAACTAGAATAGCTATCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000050 GO:0003674 GO:0003824 GO:0004088 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005951 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016053 GO:0016874 GO:0016879 GO:0016884 GO:0019627 GO:0019752 GO:0031667 GO:0031668 GO:0031669 GO:0032991 GO:0033554 GO:0034641 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050896 GO:0051716 GO:0071496 GO:0071704 GO:0071941 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00240 ko00250 ko01100 map00240 map00250 map01100

Pfam Domains

Protein Families

CPSase_sm_chain GATase

Protein Analysis

365

Amino Acids

40.2

Weight (kDa)

9.13

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CPSase_sm_chain	PF00988	79 - 183	6.5e-36	Carbamoyl-phosphate synthase small chain, CPSase domain
GATase	PF00117	259 - 339	1.5e-22	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27740
fragaria_vesca	FvH4_3g43670 FvH4_3g43670 FvH4_5g29030 FvH4_5g29030 FvH4_5g29030
malus_domestica	MD03G1020600.v1.1 MD11G1021800.v1.1 MD15G1342500.v1.1
prunus_persica	Prupe.6G016000_v2.0.a1 Prupe.6G016000_v2.0.a1 Prupe.6G163300_v2.0.a1
pyrus_communis	pycom03g01750 pycom11g01770
rosa_chinensis	RchiOBHm_Chr2g0150151 RchiOBHm_Chr5g0078331
rosa_laevigata	RLG00000020471 RLG00000036765 RLG00000036767
rosa_multiflora	Rmu_sc0000631.1_g000032 Rmu_sc0009445.1_g000001 Rmu_ssc0000020.1_g000013
rosa_roxburghii	Rroxscaffold_1G00003910 Rroxscaffold_1G00003930 Rroxscaffold_2G00097400
rosa_rugosa	Rorug02G0419400 Rorug05G0460000
rosa_samantha	Rh2AG478200 Rh2CG464400 Rh2DG499600 Rh5AG513900 Rh5AG514000 Rh5BG536900 Rh5DG548500
rosa_wichuraiana	Rw2G039040 Rw5G047700 Rw5G047720 Rw5G047860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1033
Acc65I	GGTACC	1 cut(s)	841
AccB1I	GGYRCC	1 cut(s)	841
AclWI	GGATC	3 cut(s)	56, 69, 72
AcoI	YGGCCR	3 cut(s)	13, 364, 854
AcsI	RAATTY	4 cut(s)	412, 543, 731, 984
AcuI	CTGAAG	2 cut(s)	207, 267
AfaI	GTAC	2 cut(s)	481, 843
AfiI	CCNNNNNNNGG	4 cut(s)	181, 327, 395, 980
AflII	CTTAAG	1 cut(s)	872
AgsI	TTSAA	8 cut(s)	245, 255, 313, 486, 849, 944, 1016, 1053
AjnI	CCWGG	1 cut(s)	910
AluBI	AGCT	2 cut(s)	144, 1088
AluI	AGCT	2 cut(s)	144, 1088
Alw21I	GWGCWC	4 cut(s)	22, 114, 146, 599
Alw26I	GTCTC	4 cut(s)	599, 642, 860, 909
Alw44I	GTGCAC	1 cut(s)	18
AlwI	GGATC	3 cut(s)	56, 69, 72
Ama87I	CYCGRG	2 cut(s)	145, 352
AoxI	GGCC	7 cut(s)	13, 151, 364, 806, 854, 907, 994
ApaLI	GTGCAC	1 cut(s)	18
ApeKI	GCWGC	2 cut(s)	825, 860
ApoI	RAATTY	4 cut(s)	412, 543, 731, 984
Asp718I	GGTACC	1 cut(s)	841
AspS9I	GGNCC	4 cut(s)	137, 892, 908, 994
AsuC2I	CCSGG	4 cut(s)	46, 116, 155, 328
AsuHPI	GGTGA	4 cut(s)	182, 311, 524, 545
AvaI	CYCGRG	2 cut(s)	145, 352
AvaII	GGWCC	2 cut(s)	137, 892
BaeGI	GKGCMC	1 cut(s)	22
BaeI	ACNNNNGTAYC	2 cut(s)	825, 858
BalI	TGGCCA	2 cut(s)	366, 856
BamHI	GGATCC	1 cut(s)	61
BanI	GGYRCC	1 cut(s)	841
BanII	GRGCYC	1 cut(s)	146
BarI	GAAGNNNNNNTAC	2 cut(s)	466, 498
BbsI	GAAGAC	1 cut(s)	224
Bbv12I	GWGCWC	4 cut(s)	22, 114, 146, 599
BbvI	GCAGC	2 cut(s)	812, 872
BccI	CCATC	6 cut(s)	242, 567, 746, 881, 928, 1005
BciT130I	CCWGG	1 cut(s)	912
BclI	TGATCA	1 cut(s)	459
BcnI	CCSGG	4 cut(s)	46, 116, 155, 328
BcoDI	GTCTC	4 cut(s)	599, 642, 860, 909
BfaI	CTAG	3 cut(s)	231, 455, 1080
BfmI	CTRYAG	1 cut(s)	924
BfrI	CTTAAG	1 cut(s)	872
BisI	GCNGC	6 cut(s)	94, 97, 122, 131, 826, 861
BlsI	GCNGC	6 cut(s)	95, 98, 123, 132, 827, 862
BmcAI	AGTACT	1 cut(s)	481
Bme1390I	CCNGG	5 cut(s)	46, 116, 155, 328, 912
Bme18I	GGWCC	2 cut(s)	137, 892
BmeT110I	CYCGRG	2 cut(s)	145, 352
BmgT120I	GGNCC	4 cut(s)	137, 892, 908, 994
BmiI	GGNNCC	5 cut(s)	63, 289, 843, 893, 972
BmrFI	CCNGG	5 cut(s)	46, 116, 155, 328, 912
BmsI	GCATC	1 cut(s)	217
BpiI	GAAGAC	1 cut(s)	224
BpuMI	CCSGG	4 cut(s)	46, 116, 155, 328
BsaI	GGTCTC	2 cut(s)	599, 909
BsaJI	CCNNGG	5 cut(s)	65, 115, 212, 445, 910
BsaWI	WCCGGW	1 cut(s)	174
BsaXI	ACNNNNNCTCC	2 cut(s)	176, 206
Bsc4I	CCNNNNNNNGG	4 cut(s)	181, 327, 395, 980
Bse118I	RCCGGY	1 cut(s)	161
Bse1I	ACTGG	1 cut(s)	409
Bse3DI	GCAATG	1 cut(s)	910
BseBI	CCWGG	1 cut(s)	912
BseDI	CCNNGG	5 cut(s)	65, 115, 212, 445, 910
BseGI	GGATG	1 cut(s)	317
BseLI	CCNNNNNNNGG	4 cut(s)	181, 327, 395, 980
BseMI	GCAATG	1 cut(s)	910
BseMII	CTCAG	1 cut(s)	714
BseNI	ACTGG	1 cut(s)	409
BseSI	GKGCMC	1 cut(s)	22
BseX3I	CGGCCG	1 cut(s)	13
BseXI	GCAGC	2 cut(s)	812, 872
BsgI	GTGCAG	1 cut(s)	519
Bsh1285I	CGRYCG	2 cut(s)	12, 16
BshFI	GGCC	7 cut(s)	15, 153, 366, 808, 856, 909, 996
BshNI	GGYRCC	1 cut(s)	841
BsiEI	CGRYCG	2 cut(s)	12, 16
BsiHKAI	GWGCWC	4 cut(s)	22, 114, 146, 599
BsiHKCI	CYCGRG	2 cut(s)	145, 352
BsiSI	CCGG	7 cut(s)	26, 45, 115, 154, 162, 175, 327
BslFI	GGGAC	1 cut(s)	662
BslI	CCNNNNNNNGG	4 cut(s)	181, 327, 395, 980
BsmAI	GTCTC	4 cut(s)	599, 642, 860, 909
BsmFI	GGGAC	1 cut(s)	662
BsnI	GGCC	7 cut(s)	15, 153, 366, 808, 856, 909, 996
Bso31I	GGTCTC	2 cut(s)	599, 909
BsoBI	CYCGRG	2 cut(s)	145, 352
Bsp1286I	GDGCHC	4 cut(s)	22, 114, 146, 599
Bsp143I	GATC	4 cut(s)	9, 61, 77, 459
BspANI	GGCC	7 cut(s)	15, 153, 366, 808, 856, 909, 996
BspCNI	CTCAG	1 cut(s)	715
BspHI	TCATGA	1 cut(s)	697
BspLI	GGNNCC	5 cut(s)	63, 289, 843, 893, 972
BspMAI	CTGCAG	1 cut(s)	928
BspPI	GGATC	3 cut(s)	56, 69, 72
BspT107I	GGYRCC	1 cut(s)	841
BspTI	CTTAAG	1 cut(s)	872
BspTNI	GGTCTC	2 cut(s)	599, 909
BsrDI	GCAATG	1 cut(s)	910
BsrFI	RCCGGY	1 cut(s)	161
BsrI	ACTGG	1 cut(s)	409
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	5 cut(s)	65, 115, 212, 445, 910
BssMI	GATC	4 cut(s)	9, 61, 77, 459
BssT1I	CCWWGG	2 cut(s)	212, 445
Bst2UI	CCWGG	1 cut(s)	912
Bst4CI	ACNGT	3 cut(s)	838, 949, 1043
Bst6I	CTCTTC	1 cut(s)	597
BstAFI	CTTAAG	1 cut(s)	872
BstC8I	GCNNGC	4 cut(s)	163, 364, 858, 1008
BstDEI	CTNAG	2 cut(s)	723, 803
BstEII	GGTNACC	1 cut(s)	170
BstF5I	GGATG	1 cut(s)	317
BstKTI	GATC	4 cut(s)	12, 64, 80, 462
BstMAI	GTCTC	4 cut(s)	599, 642, 860, 909
BstMBI	GATC	4 cut(s)	9, 61, 77, 459
BstMCI	CGRYCG	2 cut(s)	12, 16
BstMWI	GCNNNNNNNGC	5 cut(s)	118, 127, 130, 150, 684
BstNI	CCWGG	1 cut(s)	912
BstNSI	RCATGY	1 cut(s)	1010
BstPI	GGTNACC	1 cut(s)	170
BstSCI	CCNGG	5 cut(s)	44, 114, 153, 326, 910
BstSFI	CTRYAG	1 cut(s)	924
BstSLI	GKGCMC	1 cut(s)	22
BstV1I	GCAGC	2 cut(s)	812, 872
BstV2I	GAAGAC	1 cut(s)	224
BstX2I	RGATCY	1 cut(s)	61
BstYI	RGATCY	1 cut(s)	61
BstZI	CGGCCG	1 cut(s)	13
BsuRI	GGCC	7 cut(s)	15, 153, 366, 808, 856, 909, 996
BtsCI	GGATG	1 cut(s)	317
BtsI	GCAGTG	1 cut(s)	443
BtsIMutI	CAGTG	2 cut(s)	443, 1029
Cac8I	GCNNGC	4 cut(s)	163, 364, 858, 1008
CciI	TCATGA	1 cut(s)	697
Cfr10I	RCCGGY	1 cut(s)	161
Cfr13I	GGNCC	4 cut(s)	137, 892, 908, 994
Csp6I	GTAC	2 cut(s)	480, 842
CviAII	CATG	7 cut(s)	538, 645, 684, 698, 852, 991, 1007
CviQI	GTAC	2 cut(s)	480, 842
DdeI	CTNAG	2 cut(s)	723, 803
DpnI	GATC	4 cut(s)	11, 63, 79, 461
DpnII	GATC	4 cut(s)	9, 61, 77, 459
DrdI	GACNNNNNNGTC	1 cut(s)	1033
DseDI	GACNNNNNNGTC	1 cut(s)	1033
EaeI	YGGCCR	3 cut(s)	13, 364, 854
EagI	CGGCCG	1 cut(s)	13
Eam1104I	CTCTTC	1 cut(s)	597
EarI	CTCTTC	1 cut(s)	597
EciI	GGCGGA	2 cut(s)	31, 180
Ecl136II	GAGCTC	1 cut(s)	144
EclXI	CGGCCG	1 cut(s)	13
Eco130I	CCWWGG	2 cut(s)	212, 445
Eco24I	GRGCYC	1 cut(s)	146
Eco31I	GGTCTC	2 cut(s)	599, 909
Eco47I	GGWCC	2 cut(s)	137, 892
Eco52I	CGGCCG	1 cut(s)	13
Eco53kI	GAGCTC	1 cut(s)	144
Eco57I	CTGAAG	2 cut(s)	207, 267
Eco88I	CYCGRG	2 cut(s)	145, 352
Eco91I	GGTNACC	1 cut(s)	170
EcoICRI	GAGCTC	1 cut(s)	144
EcoO109I	RGGNCCY	1 cut(s)	892
EcoO65I	GGTNACC	1 cut(s)	170
EcoRII	CCWGG	1 cut(s)	910
EcoT14I	CCWWGG	2 cut(s)	212, 445
EcoT38I	GRGCYC	1 cut(s)	146
ErhI	CCWWGG	2 cut(s)	212, 445
FaeI	CATG	7 cut(s)	541, 648, 687, 701, 855, 994, 1010
FalI	AAGNNNNNCTT	2 cut(s)	182, 214
FaqI	GGGAC	1 cut(s)	662
FatI	CATG	7 cut(s)	537, 644, 683, 697, 851, 990, 1006
FauI	CCCGC	1 cut(s)	564
FbaI	TGATCA	1 cut(s)	459
Fnu4HI	GCNGC	6 cut(s)	94, 97, 122, 131, 826, 861
FokI	GGATG	1 cut(s)	304
FriOI	GRGCYC	1 cut(s)	146
Fsp4HI	GCNGC	6 cut(s)	94, 97, 122, 131, 826, 861
FspBI	CTAG	3 cut(s)	231, 455, 1080
GluI	GCNGC	6 cut(s)	94, 97, 122, 131, 826, 861
HaeIII	GGCC	7 cut(s)	15, 153, 366, 808, 856, 909, 996
HapII	CCGG	7 cut(s)	26, 45, 115, 154, 162, 175, 327
Hin1II	CATG	7 cut(s)	541, 648, 687, 701, 855, 994, 1010
HinfI	GANTC	4 cut(s)	428, 786, 868, 958
HpaII	CCGG	7 cut(s)	26, 45, 115, 154, 162, 175, 327
HphI	GGTGA	4 cut(s)	182, 311, 524, 545
Hpy166II	GTNNAC	1 cut(s)	20
Hpy188I	TCNGA	7 cut(s)	66, 141, 196, 205, 226, 464, 724
Hpy188III	TCNNGA	5 cut(s)	147, 285, 335, 698, 790
Hpy8I	GTNNAC	1 cut(s)	20
HpyAV	CCTTC	2 cut(s)	175, 855
HpyCH4III	ACNGT	3 cut(s)	838, 949, 1043
HpyCH4V	TGCA	8 cut(s)	20, 104, 500, 687, 828, 926, 990, 1006
HpyF10VI	GCNNNNNNNGC	5 cut(s)	118, 127, 130, 150, 684
HpyF3I	CTNAG	2 cut(s)	723, 803
Hsp92II	CATG	7 cut(s)	541, 648, 687, 701, 855, 994, 1010
KpnI	GGTACC	1 cut(s)	845
KroI	GCCGGC	1 cut(s)	161
KroNI	GCCGGC	1 cut(s)	163
Ksp22I	TGATCA	1 cut(s)	459
Kzo9I	GATC	4 cut(s)	9, 61, 77, 459
LmnI	GCTCC	1 cut(s)	109
Lsp1109I	GCAGC	2 cut(s)	812, 872
LweI	GCATC	1 cut(s)	217
MaeI	CTAG	3 cut(s)	231, 455, 1080
MaeIII	GTNAC	2 cut(s)	170, 1024
MalI	GATC	4 cut(s)	11, 63, 79, 461
MboI	GATC	4 cut(s)	9, 61, 77, 459
MboII	GAAGA	4 cut(s)	229, 257, 437, 614
MflI	RGATCY	1 cut(s)	61
MhlI	GDGCHC	4 cut(s)	22, 114, 146, 599
MlsI	TGGCCA	2 cut(s)	366, 856
MluNI	TGGCCA	2 cut(s)	366, 856
MlyI	GAGTC	1 cut(s)	862
MmeI	TCCRAC	1 cut(s)	174
MnlI	CCTC	8 cut(s)	60, 83, 143, 161, 171, 613, 705, 751
Mox20I	TGGCCA	2 cut(s)	366, 856
MreI	CGCCGGCG	1 cut(s)	161
MroNI	GCCGGC	1 cut(s)	161
MscI	TGGCCA	2 cut(s)	366, 856
MseI	TTAA	4 cut(s)	470, 564, 668, 873
Msp20I	TGGCCA	2 cut(s)	366, 856
MspCI	CTTAAG	1 cut(s)	872
MspI	CCGG	7 cut(s)	26, 45, 115, 154, 162, 175, 327
MspR9I	CCNGG	5 cut(s)	46, 116, 155, 328, 912
MvaI	CCWGG	1 cut(s)	912
MwoI	GCNNNNNNNGC	5 cut(s)	118, 127, 130, 150, 684
NaeI	GCCGGC	1 cut(s)	163
NciI	CCSGG	4 cut(s)	46, 116, 155, 328
NdeII	GATC	4 cut(s)	9, 61, 77, 459
NgoMIV	GCCGGC	1 cut(s)	161
NlaIII	CATG	7 cut(s)	541, 648, 687, 701, 855, 994, 1010
NlaIV	GGNNCC	5 cut(s)	63, 289, 843, 893, 972
NmuCI	GTSAC	2 cut(s)	170, 1024
NspI	RCATGY	1 cut(s)	1010
PaeI	GCATGC	1 cut(s)	1010
PaeR7I	CTCGAG	1 cut(s)	145
PagI	TCATGA	1 cut(s)	697
PdiI	GCCGGC	1 cut(s)	163
PfeI	GAWTC	3 cut(s)	428, 786, 958
PkrI	GCNGC	6 cut(s)	95, 98, 123, 132, 827, 862
Ple19I	CGATCG	1 cut(s)	12
PleI	GAGTC	1 cut(s)	862
PpsI	GAGTC	1 cut(s)	862
PpuMI	RGGWCCY	1 cut(s)	892
Psp124BI	GAGCTC	1 cut(s)	146
Psp5II	RGGWCCY	1 cut(s)	892
Psp6I	CCWGG	1 cut(s)	910
PspEI	GGTNACC	1 cut(s)	170
PspGI	CCWGG	1 cut(s)	910
PspN4I	GGNNCC	5 cut(s)	63, 289, 843, 893, 972
PspPI	GGNCC	4 cut(s)	137, 892, 908, 994
PspPPI	RGGWCCY	1 cut(s)	892
PstI	CTGCAG	1 cut(s)	928
PsuI	RGATCY	1 cut(s)	61
PvuI	CGATCG	1 cut(s)	12
RsaI	GTAC	2 cut(s)	481, 843
RsaNI	GTAC	2 cut(s)	480, 842
SacI	GAGCTC	1 cut(s)	146
SaqAI	TTAA	4 cut(s)	470, 564, 668, 873
SatI	GCNGC	6 cut(s)	94, 97, 122, 131, 826, 861
Sau3AI	GATC	4 cut(s)	9, 61, 77, 459
Sau96I	GGNCC	4 cut(s)	137, 892, 908, 994
ScaI	AGTACT	1 cut(s)	481
SchI	GAGTC	1 cut(s)	862
ScrFI	CCNGG	5 cut(s)	46, 116, 155, 328, 912
SduI	GDGCHC	4 cut(s)	22, 114, 146, 599
SetI	ASST	8 cut(s)	71, 146, 172, 214, 378, 847, 972, 1090
SfaNI	GCATC	1 cut(s)	217
SfcI	CTRYAG	1 cut(s)	924
Sfr274I	CTCGAG	1 cut(s)	145
SgrAI	CRCCGGYG	1 cut(s)	161
SinI	GGWCC	2 cut(s)	137, 892
SlaI	CTCGAG	1 cut(s)	145
SmlI	CTYRAG	2 cut(s)	145, 872
SmoI	CTYRAG	2 cut(s)	145, 872
SphI	GCATGC	1 cut(s)	1010
SspMI	CTAG	3 cut(s)	231, 455, 1080
SstI	GAGCTC	1 cut(s)	146
StyD4I	CCNGG	5 cut(s)	44, 114, 153, 326, 910
StyI	CCWWGG	2 cut(s)	212, 445
TaaI	ACNGT	3 cut(s)	838, 949, 1043
TaqI	TCGA	4 cut(s)	55, 76, 146, 1037
TatI	WGTACW	1 cut(s)	479
TauI	GCSGC	4 cut(s)	96, 99, 124, 133
TfiI	GAWTC	3 cut(s)	428, 786, 958
Tru1I	TTAA	4 cut(s)	470, 564, 668, 873
Tru9I	TTAA	4 cut(s)	470, 564, 668, 873
TscAI	CASTG	2 cut(s)	443, 1029
TseFI	GTSAC	2 cut(s)	170, 1024
TseI	GCWGC	2 cut(s)	825, 860
Tsp45I	GTSAC	2 cut(s)	170, 1024
TspDTI	ATGAA	3 cut(s)	438, 633, 893
TspRI	CASTG	2 cut(s)	443, 1029
Vha464I	CTTAAG	1 cut(s)	872
VneI	GTGCAC	1 cut(s)	18
VpaK11BI	GGWCC	2 cut(s)	137, 892
XapI	RAATTY	4 cut(s)	412, 543, 731, 984
XceI	RCATGY	1 cut(s)	1010
XhoI	CTCGAG	1 cut(s)	145
XspI	CTAG	3 cut(s)	231, 455, 1080
ZrmI	AGTACT	1 cut(s)	481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.