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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0147701 |
| rosa_multiflora | Rmu_sc0002539.1_g000114 Rmu_sc0002962.1_g000011 Rmu_sc0012140.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00028980 Rroxscaffold_2G00115540 Rroxscaffold_3G00249070 Rroxscaffold_4G00302130 Rroxscaffold_5G00354320 Rroxscaffold_5G00379670 Rroxscaffold_7G00216570 |
| rosa_rugosa | Rorug06G0011500 |
| rosa_samantha | Rh1AG132500 Rh2AG214900 Rh2DG220500 Rh3AG255900 Rh3BG204400 Rh3BG373500 Rh4DG243800 Rh5AG113900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 262 |
| AccB1I | GGYRCC | 1 cut(s) | 262 |
| AcoI | YGGCCR | 1 cut(s) | 155 |
| AcsI | RAATTY | 1 cut(s) | 150 |
| AfaI | GTAC | 2 cut(s) | 264, 292 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AflII | CTTAAG | 1 cut(s) | 188 |
| AflIII | ACRYGT | 1 cut(s) | 92 |
| AluBI | AGCT | 1 cut(s) | 193 |
| AluI | AGCT | 1 cut(s) | 193 |
| Alw26I | GTCTC | 1 cut(s) | 285 |
| AoxI | GGCC | 3 cut(s) | 46, 155, 163 |
| ApoI | RAATTY | 1 cut(s) | 150 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 227, 259 |
| Asp718I | GGTACC | 1 cut(s) | 262 |
| AspA2I | CCTAGG | 1 cut(s) | 166 |
| AsuHPI | GGTGA | 1 cut(s) | 140 |
| AvrII | CCTAGG | 1 cut(s) | 166 |
| BanI | GGYRCC | 1 cut(s) | 262 |
| BccI | CCATC | 1 cut(s) | 35 |
| BcoDI | GTCTC | 1 cut(s) | 285 |
| BfaI | CTAG | 2 cut(s) | 50, 167 |
| BfrI | CTTAAG | 1 cut(s) | 188 |
| BlnI | CCTAGG | 1 cut(s) | 166 |
| BmiI | GGNNCC | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 1 cut(s) | 166 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseDI | CCNNGG | 1 cut(s) | 166 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BshFI | GGCC | 3 cut(s) | 48, 157, 165 |
| BshNI | GGYRCC | 1 cut(s) | 262 |
| BslFI | GGGAC | 1 cut(s) | 130 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BsmAI | GTCTC | 1 cut(s) | 285 |
| BsmFI | GGGAC | 1 cut(s) | 130 |
| BsnI | GGCC | 3 cut(s) | 48, 157, 165 |
| BspANI | GGCC | 3 cut(s) | 48, 157, 165 |
| BspLI | GGNNCC | 1 cut(s) | 264 |
| BspT107I | GGYRCC | 1 cut(s) | 262 |
| BspTI | CTTAAG | 1 cut(s) | 188 |
| BssECI | CCNNGG | 1 cut(s) | 166 |
| BssT1I | CCWWGG | 1 cut(s) | 166 |
| Bst4CI | ACNGT | 1 cut(s) | 279 |
| Bst6I | CTCTTC | 2 cut(s) | 110, 118 |
| BstAFI | CTTAAG | 1 cut(s) | 188 |
| BstC8I | GCNNGC | 1 cut(s) | 86 |
| BstDEI | CTNAG | 1 cut(s) | 287 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstMAI | GTCTC | 1 cut(s) | 285 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstNSI | RCATGY | 1 cut(s) | 96 |
| BsuRI | GGCC | 3 cut(s) | 48, 157, 165 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| Cac8I | GCNNGC | 1 cut(s) | 86 |
| Csp6I | GTAC | 2 cut(s) | 263, 291 |
| CviAII | CATG | 2 cut(s) | 30, 93 |
| CviJI | RGCY | 7 cut(s) | 5, 28, 48, 88, 157, 165, 193 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 28, 48, 88, 157, 165, 193 |
| CviQI | GTAC | 2 cut(s) | 263, 291 |
| DdeI | CTNAG | 1 cut(s) | 287 |
| EaeI | YGGCCR | 1 cut(s) | 155 |
| Eam1104I | CTCTTC | 2 cut(s) | 110, 118 |
| EarI | CTCTTC | 2 cut(s) | 110, 118 |
| Eco130I | CCWWGG | 1 cut(s) | 166 |
| Eco147I | AGGCCT | 1 cut(s) | 165 |
| Eco32I | GATATC | 1 cut(s) | 55 |
| EcoRV | GATATC | 1 cut(s) | 55 |
| EcoT14I | CCWWGG | 1 cut(s) | 166 |
| ErhI | CCWWGG | 1 cut(s) | 166 |
| FaeI | CATG | 2 cut(s) | 33, 96 |
| FaiI | YATR | 4 cut(s) | 23, 31, 94, 275 |
| FaqI | GGGAC | 1 cut(s) | 130 |
| FatI | CATG | 2 cut(s) | 29, 92 |
| FokI | GGATG | 1 cut(s) | 121 |
| FspBI | CTAG | 2 cut(s) | 50, 167 |
| HaeIII | GGCC | 3 cut(s) | 48, 157, 165 |
| Hin1II | CATG | 2 cut(s) | 33, 96 |
| HindIII | AAGCTT | 1 cut(s) | 191 |
| HphI | GGTGA | 1 cut(s) | 140 |
| Hpy166II | GTNNAC | 1 cut(s) | 293 |
| Hpy188I | TCNGA | 1 cut(s) | 59 |
| Hpy8I | GTNNAC | 1 cut(s) | 293 |
| Hpy99I | CGWCG | 1 cut(s) | 262 |
| HpyAV | CCTTC | 2 cut(s) | 82, 127 |
| HpyCH4III | ACNGT | 1 cut(s) | 279 |
| HpyCH4V | TGCA | 2 cut(s) | 84, 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| HpyF3I | CTNAG | 1 cut(s) | 287 |
| Hsp92II | CATG | 2 cut(s) | 33, 96 |
| KpnI | GGTACC | 1 cut(s) | 266 |
| MaeI | CTAG | 2 cut(s) | 50, 167 |
| MboII | GAAGA | 5 cut(s) | 110, 124, 127, 132, 135 |
| MluCI | AATT | 1 cut(s) | 150 |
| MnlI | CCTC | 1 cut(s) | 119 |
| MseI | TTAA | 2 cut(s) | 189, 310 |
| MspCI | CTTAAG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NlaIII | CATG | 2 cut(s) | 33, 96 |
| NlaIV | GGNNCC | 1 cut(s) | 264 |
| NspI | RCATGY | 1 cut(s) | 96 |
| PceI | AGGCCT | 1 cut(s) | 165 |
| PciI | ACATGT | 1 cut(s) | 92 |
| PscI | ACATGT | 1 cut(s) | 92 |
| PspN4I | GGNNCC | 1 cut(s) | 264 |
| RsaI | GTAC | 2 cut(s) | 264, 292 |
| RsaNI | GTAC | 2 cut(s) | 263, 291 |
| SaqAI | TTAA | 2 cut(s) | 189, 310 |
| SetI | ASST | 3 cut(s) | 130, 195, 268 |
| SgeI | CNNG | 9 cut(s) | 23, 42, 62, 91, 97, 105, 179, 206, 259 |
| SmlI | CTYRAG | 1 cut(s) | 188 |
| SmoI | CTYRAG | 1 cut(s) | 188 |
| Sse9I | AATT | 1 cut(s) | 150 |
| SseBI | AGGCCT | 1 cut(s) | 165 |
| SspMI | CTAG | 2 cut(s) | 50, 167 |
| StuI | AGGCCT | 1 cut(s) | 165 |
| StyI | CCWWGG | 1 cut(s) | 166 |
| TaaI | ACNGT | 1 cut(s) | 279 |
| TasI | AATT | 1 cut(s) | 150 |
| TatI | WGTACW | 1 cut(s) | 290 |
| Tru1I | TTAA | 2 cut(s) | 189, 310 |
| Tru9I | TTAA | 2 cut(s) | 189, 310 |
| TspDTI | ATGAA | 2 cut(s) | 38, 125 |
| TspGWI | ACGGA | 1 cut(s) | 231 |
| Vha464I | CTTAAG | 1 cut(s) | 188 |
| XapI | RAATTY | 1 cut(s) | 150 |
| XceI | RCATGY | 1 cut(s) | 96 |
| XmaJI | CCTAGG | 1 cut(s) | 166 |
| XspI | CTAG | 2 cut(s) | 50, 167 |