Rh1AG132500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
25181649 .. 25199877
18229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG132500.1

Sequence Viewer

Length: 165 bp
ATGGTGGTAACTGGATTGAGAAGCAAACCTTCTCTCTCTTCTTATCTGTCATCAGTGACCTCAGACAAGTCATTGGTCACTCTAGACTCTGTGGCTTCTAGCGAAGGAAGGCGAGAAGAGTTCCACACCGAAACGATGACGGATGAGGCGTCGGGGAATCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

5.79

Weight (kDa)

4.79

Isoelectric Point (pI)

50.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcyI GRCGYC 1 cut(s) 149
BfaI CTAG 2 cut(s) 83, 99
BfmI CTRYAG 1 cut(s) 161
BsaHI GRCGYC 1 cut(s) 149
Bse1I ACTGG 1 cut(s) 16
BseGI GGATG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 16
BspCNI CTCAG 1 cut(s) 74
BsrI ACTGG 1 cut(s) 16
BssNI GRCGYC 1 cut(s) 149
Bst6I CTCTTC 2 cut(s) 43, 111
BstACI GRCGYC 1 cut(s) 149
BstDEI CTNAG 1 cut(s) 61
BstF5I GGATG 1 cut(s) 148
BstSFI CTRYAG 1 cut(s) 161
BtsCI GGATG 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 60
CseI GACGC 1 cut(s) 138
CviJI RGCY 1 cut(s) 95
CviKI_1 RGCY 1 cut(s) 95
DdeI CTNAG 1 cut(s) 61
Eam1104I CTCTTC 2 cut(s) 43, 111
EarI CTCTTC 2 cut(s) 43, 111
FalI AAGNNNNNCTT 2 cut(s) 13, 45
FokI GGATG 1 cut(s) 155
FspBI CTAG 2 cut(s) 83, 99
HgaI GACGC 1 cut(s) 138
Hin1I GRCGYC 1 cut(s) 149
HinfI GANTC 2 cut(s) 86, 157
Hpy188I TCNGA 1 cut(s) 64
Hpy188III TCNNGA 1 cut(s) 83
Hpy99I CGWCG 1 cut(s) 154
HpyAV CCTTC 3 cut(s) 39, 98, 102
HpyF3I CTNAG 1 cut(s) 61
Hsp92I GRCGYC 1 cut(s) 149
MaeI CTAG 2 cut(s) 83, 99
MaeIII GTNAC 3 cut(s) 7, 55, 76
MboII GAAGA 2 cut(s) 30, 128
MlyI GAGTC 1 cut(s) 80
MnlI CCTC 2 cut(s) 70, 139
NmuCI GTSAC 2 cut(s) 55, 76
PcsI WCGNNNNNNNCGW 1 cut(s) 146
PfeI GAWTC 1 cut(s) 157
PleI GAGTC 1 cut(s) 80
PpsI GAGTC 1 cut(s) 80
SchI GAGTC 1 cut(s) 80
SetI ASST 2 cut(s) 31, 62
SfcI CTRYAG 1 cut(s) 161
SgeI CNNG 5 cut(s) 24, 79, 95, 111, 125
SspMI CTAG 2 cut(s) 83, 99
TfiI GAWTC 1 cut(s) 157
TscAI CASTG 1 cut(s) 60
TseFI GTSAC 2 cut(s) 55, 76
Tsp45I GTSAC 2 cut(s) 55, 76
TspGWI ACGGA 1 cut(s) 155
TspRI CASTG 1 cut(s) 60
XbaI TCTAGA 1 cut(s) 82
XspI CTAG 2 cut(s) 83, 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.