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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0147701 |
| rosa_multiflora | Rmu_sc0002539.1_g000114 Rmu_sc0002962.1_g000011 Rmu_sc0012140.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00028980 Rroxscaffold_2G00115540 Rroxscaffold_3G00249070 Rroxscaffold_4G00302130 Rroxscaffold_5G00354320 Rroxscaffold_5G00379670 Rroxscaffold_7G00216570 |
| rosa_rugosa | Rorug06G0011500 |
| rosa_samantha | Rh1AG132500 Rh2AG214900 Rh2DG220500 Rh3AG255900 Rh3BG204400 Rh3BG373500 Rh4DG243800 Rh5AG113900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 323 |
| AcsI | RAATTY | 1 cut(s) | 5 |
| AflIII | ACRYGT | 1 cut(s) | 137 |
| AgsI | TTSAA | 1 cut(s) | 364 |
| AluBI | AGCT | 3 cut(s) | 19, 30, 133 |
| AluI | AGCT | 3 cut(s) | 19, 30, 133 |
| Alw21I | GWGCWC | 2 cut(s) | 175, 263 |
| Ama87I | CYCGRG | 1 cut(s) | 256 |
| ApoI | RAATTY | 1 cut(s) | 5 |
| AvaI | CYCGRG | 1 cut(s) | 256 |
| Bbv12I | GWGCWC | 2 cut(s) | 175, 263 |
| BccI | CCATC | 2 cut(s) | 80, 224 |
| BfaI | CTAG | 2 cut(s) | 27, 95 |
| BfuAI | ACCTGC | 1 cut(s) | 323 |
| BmeT110I | CYCGRG | 1 cut(s) | 256 |
| BsaJI | CCNNGG | 1 cut(s) | 74 |
| BseDI | CCNNGG | 1 cut(s) | 74 |
| BseGI | GGATG | 1 cut(s) | 159 |
| BseRI | GAGGAG | 1 cut(s) | 109 |
| BseYI | CCCAGC | 1 cut(s) | 368 |
| BsgI | GTGCAG | 1 cut(s) | 351 |
| BsiHKAI | GWGCWC | 2 cut(s) | 175, 263 |
| BsiHKCI | CYCGRG | 1 cut(s) | 256 |
| BslFI | GGGAC | 1 cut(s) | 328 |
| BsmFI | GGGAC | 1 cut(s) | 328 |
| BsoBI | CYCGRG | 1 cut(s) | 256 |
| Bsp1286I | GDGCHC | 2 cut(s) | 175, 263 |
| Bsp143I | GATC | 1 cut(s) | 279 |
| Bsp19I | CCATGG | 1 cut(s) | 74 |
| BspMI | ACCTGC | 1 cut(s) | 323 |
| BspQI | GCTCTTC | 1 cut(s) | 163 |
| BssECI | CCNNGG | 1 cut(s) | 74 |
| BssMI | GATC | 1 cut(s) | 279 |
| BssT1I | CCWWGG | 1 cut(s) | 74 |
| Bst6I | CTCTTC | 2 cut(s) | 155, 163 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 1 cut(s) | 131 |
| BstDSI | CCRYGG | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 159 |
| BstKTI | GATC | 1 cut(s) | 282 |
| BstMBI | GATC | 1 cut(s) | 279 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 56, 245 |
| BstNSI | RCATGY | 1 cut(s) | 141 |
| BtgI | CCRYGG | 1 cut(s) | 74 |
| BtsCI | GGATG | 1 cut(s) | 159 |
| BveI | ACCTGC | 1 cut(s) | 323 |
| Cac8I | GCNNGC | 1 cut(s) | 131 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 208, 243 |
| CviAII | CATG | 2 cut(s) | 75, 138 |
| CviJI | RGCY | 7 cut(s) | 19, 30, 50, 73, 133, 287, 357 |
| CviKI_1 | RGCY | 7 cut(s) | 19, 30, 50, 73, 133, 287, 357 |
| DpnI | GATC | 1 cut(s) | 281 |
| DpnII | GATC | 1 cut(s) | 279 |
| Eam1104I | CTCTTC | 2 cut(s) | 155, 163 |
| EarI | CTCTTC | 2 cut(s) | 155, 163 |
| Eco130I | CCWWGG | 1 cut(s) | 74 |
| Eco88I | CYCGRG | 1 cut(s) | 256 |
| EcoT14I | CCWWGG | 1 cut(s) | 74 |
| ErhI | CCWWGG | 1 cut(s) | 74 |
| FaeI | CATG | 2 cut(s) | 78, 141 |
| FaiI | YATR | 6 cut(s) | 39, 68, 76, 112, 139, 211 |
| FaqI | GGGAC | 1 cut(s) | 328 |
| FatI | CATG | 2 cut(s) | 74, 137 |
| FokI | GGATG | 1 cut(s) | 166 |
| FspBI | CTAG | 2 cut(s) | 27, 95 |
| GsaI | CCCAGC | 1 cut(s) | 372 |
| Hin1II | CATG | 2 cut(s) | 78, 141 |
| HindIII | AAGCTT | 2 cut(s) | 17, 131 |
| Hpy188III | TCNNGA | 1 cut(s) | 256 |
| HpyAV | CCTTC | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 4 cut(s) | 129, 239, 301, 332 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 56, 245 |
| Hsp92II | CATG | 2 cut(s) | 78, 141 |
| Kzo9I | GATC | 1 cut(s) | 279 |
| LguI | GCTCTTC | 1 cut(s) | 163 |
| LpnPI | CCDG | 6 cut(s) | 32, 87, 175, 297, 318, 354 |
| MaeI | CTAG | 2 cut(s) | 27, 95 |
| MaeIII | GTNAC | 1 cut(s) | 22 |
| MalI | GATC | 1 cut(s) | 281 |
| MboI | GATC | 1 cut(s) | 279 |
| MboII | GAAGA | 6 cut(s) | 155, 169, 172, 177, 180, 207 |
| MhlI | GDGCHC | 2 cut(s) | 175, 263 |
| MluCI | AATT | 1 cut(s) | 5 |
| MnlI | CCTC | 3 cut(s) | 4, 127, 130 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 56, 245 |
| NcoI | CCATGG | 1 cut(s) | 74 |
| NdeII | GATC | 1 cut(s) | 279 |
| NlaIII | CATG | 2 cut(s) | 78, 141 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| NspI | RCATGY | 1 cut(s) | 141 |
| PciI | ACATGT | 1 cut(s) | 137 |
| PciSI | GCTCTTC | 1 cut(s) | 163 |
| PscI | ACATGT | 1 cut(s) | 137 |
| PspFI | CCCAGC | 1 cut(s) | 368 |
| SapI | GCTCTTC | 1 cut(s) | 163 |
| Sau3AI | GATC | 1 cut(s) | 279 |
| SduI | GDGCHC | 2 cut(s) | 175, 263 |
| SetI | ASST | 5 cut(s) | 21, 32, 135, 300, 337 |
| Sse9I | AATT | 1 cut(s) | 5 |
| SspMI | CTAG | 2 cut(s) | 27, 95 |
| StyI | CCWWGG | 1 cut(s) | 74 |
| TasI | AATT | 1 cut(s) | 5 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 3 cut(s) | 17, 83, 170 |
| XapI | RAATTY | 1 cut(s) | 5 |
| XceI | RCATGY | 1 cut(s) | 141 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 365 |
| XspI | CTAG | 2 cut(s) | 27, 95 |