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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0147701 |
| rosa_multiflora | Rmu_sc0002539.1_g000114 Rmu_sc0002962.1_g000011 Rmu_sc0012140.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00028980 Rroxscaffold_2G00115540 Rroxscaffold_3G00249070 Rroxscaffold_4G00302130 Rroxscaffold_5G00354320 Rroxscaffold_5G00379670 Rroxscaffold_7G00216570 |
| rosa_rugosa | Rorug06G0011500 |
| rosa_samantha | Rh1AG132500 Rh2AG214900 Rh2DG220500 Rh3AG255900 Rh3BG204400 Rh3BG373500 Rh4DG243800 Rh5AG113900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 164 |
| AciI | CCGC | 1 cut(s) | 75 |
| AcoI | YGGCCR | 1 cut(s) | 9 |
| AfaI | GTAC | 1 cut(s) | 90 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 18 |
| AflIII | ACRYGT | 1 cut(s) | 162 |
| AjnI | CCWGG | 1 cut(s) | 79 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| Ama87I | CYCGRG | 1 cut(s) | 111 |
| AoxI | GGCC | 1 cut(s) | 9 |
| ApeKI | GCWGC | 1 cut(s) | 47 |
| AvaI | CYCGRG | 1 cut(s) | 111 |
| BalI | TGGCCA | 1 cut(s) | 11 |
| BauI | CACGAG | 1 cut(s) | 147 |
| BbvI | GCAGC | 1 cut(s) | 34 |
| BccI | CCATC | 2 cut(s) | 38, 125 |
| BciT130I | CCWGG | 1 cut(s) | 81 |
| BisI | GCNGC | 1 cut(s) | 48 |
| BlsI | GCNGC | 1 cut(s) | 49 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| BmeT110I | CYCGRG | 1 cut(s) | 111 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BpmI | CTGGAG | 1 cut(s) | 19 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 18 |
| BseBI | CCWGG | 1 cut(s) | 81 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 18 |
| BseXI | GCAGC | 1 cut(s) | 34 |
| BseYI | CCCAGC | 1 cut(s) | 66 |
| Bsh1236I | CGCG | 1 cut(s) | 164 |
| BshFI | GGCC | 1 cut(s) | 11 |
| BsiHKCI | CYCGRG | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 18 |
| BsnI | GGCC | 1 cut(s) | 11 |
| BsoBI | CYCGRG | 1 cut(s) | 111 |
| Bsp1407I | TGTACA | 1 cut(s) | 88 |
| BspACI | CCGC | 1 cut(s) | 75 |
| BspANI | GGCC | 1 cut(s) | 11 |
| BspFNI | CGCG | 1 cut(s) | 164 |
| BsrGI | TGTACA | 1 cut(s) | 88 |
| BssSI | CACGAG | 1 cut(s) | 147 |
| Bst2BI | CACGAG | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 1 cut(s) | 81 |
| Bst6I | CTCTTC | 1 cut(s) | 34 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 107 |
| BstAUI | TGTACA | 1 cut(s) | 88 |
| BstC8I | GCNNGC | 1 cut(s) | 63 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstFNI | CGCG | 1 cut(s) | 164 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 67, 107 |
| BstNI | CCWGG | 1 cut(s) | 81 |
| BstNSI | RCATGY | 1 cut(s) | 65 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| BstUI | CGCG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 1 cut(s) | 34 |
| BsuRI | GGCC | 1 cut(s) | 11 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| BtsI | GCAGTG | 1 cut(s) | 108 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| Cac8I | GCNNGC | 1 cut(s) | 63 |
| Csp6I | GTAC | 1 cut(s) | 89 |
| CviAII | CATG | 1 cut(s) | 62 |
| CviJI | RGCY | 2 cut(s) | 11, 70 |
| CviKI_1 | RGCY | 2 cut(s) | 11, 70 |
| CviQI | GTAC | 1 cut(s) | 89 |
| EaeI | YGGCCR | 1 cut(s) | 9 |
| Eam1104I | CTCTTC | 1 cut(s) | 34 |
| EarI | CTCTTC | 1 cut(s) | 34 |
| Eco88I | CYCGRG | 1 cut(s) | 111 |
| EcoRII | CCWGG | 1 cut(s) | 79 |
| FaeI | CATG | 1 cut(s) | 65 |
| FaiI | YATR | 1 cut(s) | 63 |
| FatI | CATG | 1 cut(s) | 61 |
| Fnu4HI | GCNGC | 1 cut(s) | 48 |
| FokI | GGATG | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 1 cut(s) | 48 |
| GluI | GCNGC | 1 cut(s) | 48 |
| GsaI | CCCAGC | 1 cut(s) | 70 |
| GsuI | CTGGAG | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 11 |
| Hin1II | CATG | 1 cut(s) | 65 |
| HinfI | GANTC | 1 cut(s) | 42 |
| Hpy188III | TCNNGA | 1 cut(s) | 36 |
| Hpy99I | CGWCG | 1 cut(s) | 20 |
| HpyCH4IV | ACGT | 1 cut(s) | 141 |
| HpyCH4V | TGCA | 1 cut(s) | 61 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 67, 107 |
| HpySE526I | ACGT | 1 cut(s) | 141 |
| Hsp92II | CATG | 1 cut(s) | 65 |
| LpnPI | CCDG | 5 cut(s) | 49, 66, 80, 93, 104 |
| Lsp1109I | GCAGC | 1 cut(s) | 34 |
| MaeII | ACGT | 1 cut(s) | 141 |
| MaeIII | GTNAC | 1 cut(s) | 158 |
| MboII | GAAGA | 1 cut(s) | 51 |
| MlsI | TGGCCA | 1 cut(s) | 11 |
| MluCI | AATT | 1 cut(s) | 24 |
| MluI | ACGCGT | 1 cut(s) | 162 |
| MluNI | TGGCCA | 1 cut(s) | 11 |
| MlyI | GAGTC | 1 cut(s) | 51 |
| Mox20I | TGGCCA | 1 cut(s) | 11 |
| MscI | TGGCCA | 1 cut(s) | 11 |
| Msp20I | TGGCCA | 1 cut(s) | 11 |
| MspA1I | CMGCKG | 1 cut(s) | 70 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| MvaI | CCWGG | 1 cut(s) | 81 |
| MvnI | CGCG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 67, 107 |
| NlaIII | CATG | 1 cut(s) | 65 |
| NmuCI | GTSAC | 1 cut(s) | 158 |
| NspI | RCATGY | 1 cut(s) | 65 |
| PaeI | GCATGC | 1 cut(s) | 65 |
| PaeR7I | CTCGAG | 1 cut(s) | 111 |
| PkrI | GCNGC | 1 cut(s) | 49 |
| PleI | GAGTC | 1 cut(s) | 50 |
| PpsI | GAGTC | 1 cut(s) | 50 |
| Psp6I | CCWGG | 1 cut(s) | 79 |
| PspFI | CCCAGC | 1 cut(s) | 66 |
| PspGI | CCWGG | 1 cut(s) | 79 |
| PspXI | VCTCGAGB | 1 cut(s) | 111 |
| PvuII | CAGCTG | 1 cut(s) | 70 |
| RsaI | GTAC | 1 cut(s) | 90 |
| RsaNI | GTAC | 1 cut(s) | 89 |
| SatI | GCNGC | 1 cut(s) | 48 |
| SchI | GAGTC | 1 cut(s) | 51 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SetI | ASST | 3 cut(s) | 72, 82, 144 |
| Sfr274I | CTCGAG | 1 cut(s) | 111 |
| SlaI | CTCGAG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 1 cut(s) | 111 |
| SmoI | CTYRAG | 1 cut(s) | 111 |
| SphI | GCATGC | 1 cut(s) | 65 |
| Sse9I | AATT | 1 cut(s) | 24 |
| SsiI | CCGC | 1 cut(s) | 75 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| TaiI | ACGT | 1 cut(s) | 144 |
| TaqI | TCGA | 1 cut(s) | 112 |
| TasI | AATT | 1 cut(s) | 24 |
| TatI | WGTACW | 1 cut(s) | 88 |
| TscAI | CASTG | 1 cut(s) | 108 |
| TseFI | GTSAC | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 1 cut(s) | 158 |
| TspRI | CASTG | 1 cut(s) | 108 |
| XceI | RCATGY | 1 cut(s) | 65 |
| XhoI | CTCGAG | 1 cut(s) | 111 |