UPF0481 protein At3g47200-like
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0147701 |
| rosa_multiflora | Rmu_sc0002539.1_g000114 Rmu_sc0002962.1_g000011 Rmu_sc0012140.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00028980 Rroxscaffold_2G00115540 Rroxscaffold_3G00249070 Rroxscaffold_4G00302130 Rroxscaffold_5G00354320 Rroxscaffold_5G00379670 Rroxscaffold_7G00216570 |
| rosa_rugosa | Rorug06G0011500 |
| rosa_samantha | Rh1AG132500 Rh2AG214900 Rh2DG220500 Rh3AG255900 Rh3BG204400 Rh3BG373500 Rh4DG243800 Rh5AG113900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 263 |
| AccII | CGCG | 1 cut(s) | 158 |
| AciI | CCGC | 1 cut(s) | 261 |
| AclWI | GGATC | 2 cut(s) | 89, 107 |
| AcsI | RAATTY | 1 cut(s) | 189 |
| AcyI | GRCGYC | 1 cut(s) | 497 |
| AfaI | GTAC | 1 cut(s) | 6 |
| AgsI | TTSAA | 2 cut(s) | 136, 145 |
| AluBI | AGCT | 2 cut(s) | 31, 252 |
| AluI | AGCT | 2 cut(s) | 31, 252 |
| Alw21I | GWGCWC | 1 cut(s) | 183 |
| Alw26I | GTCTC | 4 cut(s) | 85, 203, 331, 439 |
| AlwI | GGATC | 2 cut(s) | 89, 107 |
| AoxI | GGCC | 1 cut(s) | 161 |
| ApoI | RAATTY | 1 cut(s) | 189 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| Bbv12I | GWGCWC | 1 cut(s) | 183 |
| BccI | CCATC | 1 cut(s) | 5 |
| BcoDI | GTCTC | 4 cut(s) | 85, 203, 331, 439 |
| BfaI | CTAG | 2 cut(s) | 347, 447 |
| BmiI | GGNNCC | 1 cut(s) | 530 |
| BpmI | CTGGAG | 1 cut(s) | 287 |
| BpuEI | CTTGAG | 2 cut(s) | 232, 267 |
| BsaHI | GRCGYC | 1 cut(s) | 497 |
| BsaI | GGTCTC | 1 cut(s) | 439 |
| Bse1I | ACTGG | 1 cut(s) | 55 |
| BseGI | GGATG | 1 cut(s) | 496 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseNI | ACTGG | 1 cut(s) | 55 |
| BsgI | GTGCAG | 1 cut(s) | 241 |
| Bsh1236I | CGCG | 1 cut(s) | 158 |
| BshFI | GGCC | 1 cut(s) | 163 |
| BsiHKAI | GWGCWC | 1 cut(s) | 183 |
| BsmAI | GTCTC | 4 cut(s) | 85, 203, 331, 439 |
| BsnI | GGCC | 1 cut(s) | 163 |
| Bso31I | GGTCTC | 1 cut(s) | 439 |
| Bsp1286I | GDGCHC | 1 cut(s) | 183 |
| Bsp143I | GATC | 3 cut(s) | 94, 112, 286 |
| Bsp68I | TCGCGA | 1 cut(s) | 158 |
| BspACI | CCGC | 1 cut(s) | 261 |
| BspANI | GGCC | 1 cut(s) | 163 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspFNI | CGCG | 1 cut(s) | 158 |
| BspLI | GGNNCC | 1 cut(s) | 530 |
| BspPI | GGATC | 2 cut(s) | 89, 107 |
| BspTNI | GGTCTC | 1 cut(s) | 439 |
| BsrBI | CCGCTC | 1 cut(s) | 263 |
| BsrI | ACTGG | 1 cut(s) | 55 |
| BssMI | GATC | 3 cut(s) | 94, 112, 286 |
| BssNI | GRCGYC | 1 cut(s) | 497 |
| Bst4CI | ACNGT | 1 cut(s) | 79 |
| Bst6I | CTCTTC | 2 cut(s) | 391, 459 |
| BstACI | GRCGYC | 1 cut(s) | 497 |
| BstDEI | CTNAG | 1 cut(s) | 213 |
| BstF5I | GGATG | 1 cut(s) | 496 |
| BstFNI | CGCG | 1 cut(s) | 158 |
| BstKTI | GATC | 3 cut(s) | 97, 115, 289 |
| BstMAI | GTCTC | 4 cut(s) | 85, 203, 331, 439 |
| BstMBI | GATC | 3 cut(s) | 94, 112, 286 |
| BstUI | CGCG | 1 cut(s) | 158 |
| BsuRI | GGCC | 1 cut(s) | 163 |
| BtsCI | GGATG | 1 cut(s) | 496 |
| BtuMI | TCGCGA | 1 cut(s) | 158 |
| CseI | GACGC | 1 cut(s) | 486 |
| Csp6I | GTAC | 1 cut(s) | 5 |
| CviJI | RGCY | 5 cut(s) | 31, 163, 252, 300, 443 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 163, 252, 300, 443 |
| CviQI | GTAC | 1 cut(s) | 5 |
| DdeI | CTNAG | 1 cut(s) | 213 |
| DpnI | GATC | 3 cut(s) | 96, 114, 288 |
| DpnII | GATC | 3 cut(s) | 94, 112, 286 |
| Eam1104I | CTCTTC | 2 cut(s) | 391, 459 |
| EarI | CTCTTC | 2 cut(s) | 391, 459 |
| Eco147I | AGGCCT | 1 cut(s) | 163 |
| Eco31I | GGTCTC | 1 cut(s) | 439 |
| FaiI | YATR | 4 cut(s) | 66, 311, 318, 326 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 361, 393 |
| FokI | GGATG | 1 cut(s) | 503 |
| FspBI | CTAG | 2 cut(s) | 347, 447 |
| GsuI | CTGGAG | 1 cut(s) | 287 |
| HaeIII | GGCC | 1 cut(s) | 163 |
| HgaI | GACGC | 1 cut(s) | 486 |
| Hin1I | GRCGYC | 1 cut(s) | 497 |
| HindIII | AAGCTT | 1 cut(s) | 250 |
| HinfI | GANTC | 2 cut(s) | 211, 505 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy188I | TCNGA | 2 cut(s) | 362, 412 |
| Hpy188III | TCNNGA | 5 cut(s) | 157, 206, 266, 284, 509 |
| Hpy99I | CGWCG | 2 cut(s) | 400, 502 |
| HpyAV | CCTTC | 3 cut(s) | 387, 446, 450 |
| HpyCH4III | ACNGT | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 1 cut(s) | 258 |
| HpyF3I | CTNAG | 1 cut(s) | 213 |
| Hsp92I | GRCGYC | 1 cut(s) | 497 |
| Kzo9I | GATC | 3 cut(s) | 94, 112, 286 |
| LmnI | GCTCC | 2 cut(s) | 186, 268 |
| LpnPI | CCDG | 8 cut(s) | 36, 103, 191, 200, 251, 407, 416, 494 |
| MaeI | CTAG | 2 cut(s) | 347, 447 |
| MaeIII | GTNAC | 2 cut(s) | 349, 424 |
| MalI | GATC | 3 cut(s) | 96, 114, 288 |
| MbiI | CCGCTC | 1 cut(s) | 263 |
| MboI | GATC | 3 cut(s) | 94, 112, 286 |
| MboII | GAAGA | 6 cut(s) | 133, 185, 378, 381, 384, 476 |
| MhlI | GDGCHC | 1 cut(s) | 183 |
| MluCI | AATT | 1 cut(s) | 189 |
| MlyI | GAGTC | 1 cut(s) | 205 |
| MmeI | TCCRAC | 2 cut(s) | 330, 435 |
| MnlI | CCTC | 3 cut(s) | 153, 418, 487 |
| MroXI | GAANNNNTTC | 1 cut(s) | 140 |
| MseI | TTAA | 1 cut(s) | 60 |
| MvnI | CGCG | 1 cut(s) | 158 |
| NdeII | GATC | 3 cut(s) | 94, 112, 286 |
| NlaIV | GGNNCC | 1 cut(s) | 530 |
| NmuCI | GTSAC | 2 cut(s) | 349, 424 |
| NruI | TCGCGA | 1 cut(s) | 158 |
| PceI | AGGCCT | 1 cut(s) | 163 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 401, 494 |
| PdmI | GAANNNNTTC | 1 cut(s) | 140 |
| PfeI | GAWTC | 1 cut(s) | 505 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| PspN4I | GGNNCC | 1 cut(s) | 530 |
| RruI | TCGCGA | 1 cut(s) | 158 |
| RsaI | GTAC | 1 cut(s) | 6 |
| RsaNI | GTAC | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 60 |
| Sau3AI | GATC | 3 cut(s) | 94, 112, 286 |
| SchI | GAGTC | 1 cut(s) | 205 |
| SduI | GDGCHC | 1 cut(s) | 183 |
| SetI | ASST | 6 cut(s) | 33, 134, 254, 348, 379, 410 |
| SmlI | CTYRAG | 2 cut(s) | 247, 282 |
| SmoI | CTYRAG | 2 cut(s) | 247, 282 |
| Sse9I | AATT | 1 cut(s) | 189 |
| SseBI | AGGCCT | 1 cut(s) | 163 |
| SsiI | CCGC | 1 cut(s) | 261 |
| SspMI | CTAG | 2 cut(s) | 347, 447 |
| StuI | AGGCCT | 1 cut(s) | 163 |
| TaaI | ACNGT | 1 cut(s) | 79 |
| TaqI | TCGA | 2 cut(s) | 27, 37 |
| TasI | AATT | 1 cut(s) | 189 |
| TfiI | GAWTC | 1 cut(s) | 505 |
| Tru1I | TTAA | 1 cut(s) | 60 |
| Tru9I | TTAA | 1 cut(s) | 60 |
| TseFI | GTSAC | 2 cut(s) | 349, 424 |
| Tsp45I | GTSAC | 2 cut(s) | 349, 424 |
| TspDTI | ATGAA | 5 cut(s) | 10, 59, 87, 141, 186 |
| TspGWI | ACGGA | 1 cut(s) | 503 |
| XapI | RAATTY | 1 cut(s) | 189 |
| XmnI | GAANNNNTTC | 1 cut(s) | 140 |
| XspI | CTAG | 2 cut(s) | 347, 447 |