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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0147701 |
| rosa_multiflora | Rmu_sc0002539.1_g000114 Rmu_sc0002962.1_g000011 Rmu_sc0012140.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00028980 Rroxscaffold_2G00115540 Rroxscaffold_3G00249070 Rroxscaffold_4G00302130 Rroxscaffold_5G00354320 Rroxscaffold_5G00379670 Rroxscaffold_7G00216570 |
| rosa_rugosa | Rorug06G0011500 |
| rosa_samantha | Rh1AG132500 Rh2AG214900 Rh2DG220500 Rh3AG255900 Rh3BG204400 Rh3BG373500 Rh4DG243800 Rh5AG113900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 138 |
| AcoI | YGGCCR | 2 cut(s) | 9, 485 |
| AcsI | RAATTY | 4 cut(s) | 14, 190, 290, 480 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 483 |
| AflII | CTTAAG | 1 cut(s) | 518 |
| AflIII | ACRYGT | 1 cut(s) | 422 |
| AgsI | TTSAA | 1 cut(s) | 219 |
| AluBI | AGCT | 4 cut(s) | 133, 304, 315, 523 |
| AluI | AGCT | 4 cut(s) | 133, 304, 315, 523 |
| Alw26I | GTCTC | 1 cut(s) | 30 |
| AoxI | GGCC | 3 cut(s) | 9, 485, 493 |
| ApeKI | GCWGC | 2 cut(s) | 110, 130 |
| ApoI | RAATTY | 4 cut(s) | 14, 190, 290, 480 |
| AspA2I | CCTAGG | 1 cut(s) | 496 |
| AsuHPI | GGTGA | 2 cut(s) | 53, 470 |
| AvrII | CCTAGG | 1 cut(s) | 496 |
| BalI | TGGCCA | 1 cut(s) | 11 |
| BbvI | GCAGC | 2 cut(s) | 97, 142 |
| BccI | CCATC | 3 cut(s) | 37, 101, 365 |
| BcoDI | GTCTC | 1 cut(s) | 30 |
| BfaI | CTAG | 3 cut(s) | 312, 380, 497 |
| BfrI | CTTAAG | 1 cut(s) | 518 |
| BisI | GCNGC | 2 cut(s) | 111, 131 |
| BlnI | CCTAGG | 1 cut(s) | 496 |
| BlsI | GCNGC | 2 cut(s) | 112, 132 |
| BpmI | CTGGAG | 1 cut(s) | 82 |
| BpuEI | CTTGAG | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 2 cut(s) | 359, 496 |
| BsaWI | WCCGGW | 1 cut(s) | 386 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 483 |
| BseDI | CCNNGG | 2 cut(s) | 359, 496 |
| BseGI | GGATG | 1 cut(s) | 444 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 483 |
| BseRI | GAGGAG | 2 cut(s) | 290, 394 |
| BseXI | GCAGC | 2 cut(s) | 97, 142 |
| BshFI | GGCC | 3 cut(s) | 11, 487, 495 |
| BsiSI | CCGG | 1 cut(s) | 387 |
| BslFI | GGGAC | 1 cut(s) | 460 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 483 |
| BsmAI | GTCTC | 1 cut(s) | 30 |
| BsmFI | GGGAC | 1 cut(s) | 460 |
| BsnI | GGCC | 3 cut(s) | 11, 487, 495 |
| Bsp19I | CCATGG | 1 cut(s) | 359 |
| BspACI | CCGC | 1 cut(s) | 138 |
| BspANI | GGCC | 3 cut(s) | 11, 487, 495 |
| BspTI | CTTAAG | 1 cut(s) | 518 |
| BssECI | CCNNGG | 2 cut(s) | 359, 496 |
| BssT1I | CCWWGG | 2 cut(s) | 359, 496 |
| Bst6I | CTCTTC | 3 cut(s) | 97, 257, 448 |
| BstAFI | CTTAAG | 1 cut(s) | 518 |
| BstC8I | GCNNGC | 1 cut(s) | 416 |
| BstDSI | CCRYGG | 1 cut(s) | 359 |
| BstF5I | GGATG | 1 cut(s) | 444 |
| BstMAI | GTCTC | 1 cut(s) | 30 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 130, 204 |
| BstNSI | RCATGY | 2 cut(s) | 240, 426 |
| BstV1I | GCAGC | 2 cut(s) | 97, 142 |
| BsuRI | GGCC | 3 cut(s) | 11, 487, 495 |
| BtgI | CCRYGG | 1 cut(s) | 359 |
| BtsCI | GGATG | 1 cut(s) | 444 |
| Cac8I | GCNNGC | 1 cut(s) | 416 |
| CviAII | CATG | 5 cut(s) | 237, 286, 331, 360, 423 |
| EaeI | YGGCCR | 2 cut(s) | 9, 485 |
| Eam1104I | CTCTTC | 3 cut(s) | 97, 257, 448 |
| EarI | CTCTTC | 3 cut(s) | 97, 257, 448 |
| Eco130I | CCWWGG | 2 cut(s) | 359, 496 |
| Eco147I | AGGCCT | 1 cut(s) | 495 |
| EcoT14I | CCWWGG | 2 cut(s) | 359, 496 |
| ErhI | CCWWGG | 2 cut(s) | 359, 496 |
| FaeI | CATG | 5 cut(s) | 240, 289, 334, 363, 426 |
| FaiI | YATR | 9 cut(s) | 126, 225, 238, 287, 324, 332, 353, 361, 424 |
| FaqI | GGGAC | 1 cut(s) | 460 |
| FatI | CATG | 5 cut(s) | 236, 285, 330, 359, 422 |
| Fnu4HI | GCNGC | 2 cut(s) | 111, 131 |
| FokI | GGATG | 1 cut(s) | 451 |
| Fsp4HI | GCNGC | 2 cut(s) | 111, 131 |
| FspBI | CTAG | 3 cut(s) | 312, 380, 497 |
| GluI | GCNGC | 2 cut(s) | 111, 131 |
| GsuI | CTGGAG | 1 cut(s) | 82 |
| HaeIII | GGCC | 3 cut(s) | 11, 487, 495 |
| HapII | CCGG | 1 cut(s) | 387 |
| Hin1II | CATG | 5 cut(s) | 240, 289, 334, 363, 426 |
| HindIII | AAGCTT | 2 cut(s) | 302, 521 |
| HinfI | GANTC | 1 cut(s) | 105 |
| HpaII | CCGG | 1 cut(s) | 387 |
| HphI | GGTGA | 2 cut(s) | 53, 470 |
| Hpy188III | TCNNGA | 1 cut(s) | 99 |
| HpyAV | CCTTC | 3 cut(s) | 169, 209, 457 |
| HpyCH4V | TGCA | 3 cut(s) | 124, 414, 540 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 130, 204 |
| Hsp92II | CATG | 5 cut(s) | 240, 289, 334, 363, 426 |
| LpnPI | CCDG | 2 cut(s) | 112, 400 |
| Lsp1109I | GCAGC | 2 cut(s) | 97, 142 |
| MaeI | CTAG | 3 cut(s) | 312, 380, 497 |
| MaeIII | GTNAC | 1 cut(s) | 307 |
| MboII | GAAGA | 6 cut(s) | 114, 274, 440, 454, 462, 465 |
| MlsI | TGGCCA | 1 cut(s) | 11 |
| MluCI | AATT | 4 cut(s) | 14, 190, 290, 480 |
| MluNI | TGGCCA | 1 cut(s) | 11 |
| MlyI | GAGTC | 1 cut(s) | 114 |
| MnlI | CCTC | 6 cut(s) | 46, 258, 268, 412, 415, 449 |
| Mox20I | TGGCCA | 1 cut(s) | 11 |
| MscI | TGGCCA | 1 cut(s) | 11 |
| MseI | TTAA | 4 cut(s) | 48, 294, 519, 550 |
| Msp20I | TGGCCA | 1 cut(s) | 11 |
| MspA1I | CMGCKG | 1 cut(s) | 133 |
| MspCI | CTTAAG | 1 cut(s) | 518 |
| MspI | CCGG | 1 cut(s) | 387 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 130, 204 |
| NcoI | CCATGG | 1 cut(s) | 359 |
| NlaIII | CATG | 5 cut(s) | 240, 289, 334, 363, 426 |
| NmuCI | GTSAC | 1 cut(s) | 307 |
| NspI | RCATGY | 2 cut(s) | 240, 426 |
| PceI | AGGCCT | 1 cut(s) | 495 |
| PciI | ACATGT | 1 cut(s) | 422 |
| PkrI | GCNGC | 2 cut(s) | 112, 132 |
| PleI | GAGTC | 1 cut(s) | 113 |
| PpsI | GAGTC | 1 cut(s) | 113 |
| PscI | ACATGT | 1 cut(s) | 422 |
| PvuII | CAGCTG | 1 cut(s) | 133 |
| SaqAI | TTAA | 4 cut(s) | 48, 294, 519, 550 |
| SatI | GCNGC | 2 cut(s) | 111, 131 |
| SchI | GAGTC | 1 cut(s) | 114 |
| SetI | ASST | 6 cut(s) | 135, 306, 317, 460, 525, 547 |
| SmlI | CTYRAG | 2 cut(s) | 184, 518 |
| SmoI | CTYRAG | 2 cut(s) | 184, 518 |
| Sse9I | AATT | 4 cut(s) | 14, 190, 290, 480 |
| SseBI | AGGCCT | 1 cut(s) | 495 |
| SsiI | CCGC | 1 cut(s) | 138 |
| SspMI | CTAG | 3 cut(s) | 312, 380, 497 |
| StuI | AGGCCT | 1 cut(s) | 495 |
| StyI | CCWWGG | 2 cut(s) | 359, 496 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 4 cut(s) | 14, 190, 290, 480 |
| Tru1I | TTAA | 4 cut(s) | 48, 294, 519, 550 |
| Tru9I | TTAA | 4 cut(s) | 48, 294, 519, 550 |
| TseFI | GTSAC | 1 cut(s) | 307 |
| TseI | GCWGC | 2 cut(s) | 110, 130 |
| Tsp45I | GTSAC | 1 cut(s) | 307 |
| TspDTI | ATGAA | 5 cut(s) | 7, 302, 319, 368, 455 |
| Vha464I | CTTAAG | 1 cut(s) | 518 |
| XapI | RAATTY | 4 cut(s) | 14, 190, 290, 480 |
| XceI | RCATGY | 2 cut(s) | 240, 426 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 166 |
| XmaJI | CCTAGG | 1 cut(s) | 496 |
| XspI | CTAG | 3 cut(s) | 312, 380, 497 |