Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005483

Physical Location & Seq

Genomic Coordinates Forward (+)

69784867 .. 69788429

Gene Structure 3563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00132780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGACTAGCATTCTCAGTCCTTCCTCTCCAAAAATGGCTCTACTCGGAGACGACGGCCGTGGCTACGAGCTGGCCTGTAAGCTCGAGTCCTGCAACGTCTGGCGCACCTGGCTCGGCGACTCCAACTACGCCACCTTCGTCCACTTCCTCTCCTCCCCCTCCACCTGGGACTCCTTCATGCGATCCGACGACTCCAAACCTAGGGCTCAGATCCATCTCCAACTCCGCGCCCGTGCCCTCCTCTTCGACAAAGCCTGCGTCTCTCTCTTCCTCCGCCCCGATTCCGATTCCAATTCCTCTTCTTCTTCTTCGCTCGCCGTTTCCCAGCTCAATCCCACCTATTTGCAGTTGCATGCTGATGACGTGTACTGCACTCTCGAGAACTCTTCCACAGAAGGAGTTCAGGCTCAACAGCGCGAGGCCTCCAAGATTCAGTCAAAAACAGCTTTTGGTTTTGGATCAAGATATGGAGAATCTGAAATTGATAATAAGCCACCGAGGTTTAAAAATGAAGAGCTGCCTGAGACCTGGTATAATCAGGTTATTGAGAGACATAGGGCTACCAAACCGCATAGGTTGTCATCAGCAGACCGAGAATCAGAGAAACGTACTCCAGAGGAGATGTCTGCTTATCTTAAGCTTGCTGTGAAGCATAAGAAAAGGTGTTTAGCATTCAAAGAAGATCAGTATGTGGGATATGGAAATTCCCTCCTAGAAAATGCATCACAGAATCCACATTCTGTTTTAGATGGTAGTAGTTCAATTGATCATGAAGCATCTTTTTTCCCAGAAACAATGTTTACGTTGAACTGTGTTCCTGATAGTGCACTTCCACCTATGAATAGAGTGCAAGATGACCAAAAAGTTGAATTTTATGGAGTTCTTGATACGTTACCTCAGGCTTTGACTAGGAGTCCCGTTATGCTTGAGAGGCTTGGTATAAGACCTGAATACCTTAACATGGATCAAGGTGGAAGCTTACATCGTGGAAAGAATGGGTCTGCAGGGAACAAAAGTTGTCTTACTCATGAGCAAGCGGCACAGTTATCTCAAAAGGTAATAGCCCGGATGCTGACAAATGTGGGATTTGAAGGTTCCTCAGAAGTTCCAATTGAAGTTTTCTCTCAGTTGCTAAGCTGTCATATCCGTAAATTGGGTAGCAGCTTGAAAGTTCTTACTGATAGTTACAGAAAGCAGTGTTCAGCAATTGAACTATTGAAGATGTTCCTTCAAACAGTGGGATATAGTAATTTTGGCCCTCTAGCTGATCAAGTCAAGGATGGCTCCAGGAATTTCCATCAACAAAGTCAGCAGCAAATTCATGGAATGCAGTCACAGTTGCAGCCACAGCACCAAAACCCTATTCGACTACCCCAACAAATATCGAGACAAATGCATCCGCAGATGCAGCAGATTCAGCAAATGCAGCAAATTGCCCAATCCAAGAATCTGCCATTTCAGCAACAGCAGCAGATGGAAAGAATGCGAAGACGTCAACCATCTACTCGTGCTGGTATGGACATGGTACAGGACAGACCAATGGTCCAGGTCAAGATTGAAGCTCCATCAGAGTTACCCATGGATAGTAATGCCTTCAACAGTTTCAACAACAGACATCCACAATTGCAGTTCAGGCAGCAGCAAATTCCTGCCATGTCCAATCCTACAATGCAAAATGTCCCTGCTCAGTCAGGGAATCAGTTTAGACAGATATCTCCTTCACAAATTGCACAAATTCAATCACAGAACGCCGGTGTTCTTAGGGCTCGACCAGTGAAGGTTGAAGGTTTCCAGGAATTAATGGGTGGAGATGCTTCATTGAAGCATGATTCAGATGAAAATAGGCTGACCTCCCCAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromo_TP

Protein Analysis

620

Amino Acids

69.95

Weight (kDa)

8.59

Isoelectric Point (pI)

63.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005483)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65540
fragaria_vesca	FvH4_1g19490 FvH4_1g19490
malus_domestica	MD01G1040900.v1.1 MD15G1310400.v1.1
prunus_persica	Prupe.6G203300_v2.0.a1
pyrus_communis	pycom01g06850 pycom15g27420
rosa_chinensis	RchiOBHm_Chr2g0110871 RchiOBHm_Chr2g0110941
rosa_laevigata	RLG00000017847 RLG00000017849 RLG00000017853 RLG00000017855
rosa_multiflora	Rmu_sc0003994.1_g000015 Rmu_sc0003994.1_g000016 Rmu_sc0032518.1_g000001 Rmu_sc0032519.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132780 Rroxscaffold_2G00132790
rosa_rugosa	Rorug02G0170300 Rorug02G0170300
rosa_samantha	Rh2AG222300 Rh2BG233100 Rh2BG233800 Rh2CG225100 Rh2CG225400 Rh2DG230300
rosa_wichuraiana	Rw2G017180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1495
AccII	CGCG	2 cut(s)	228, 417
AciI	CCGC	5 cut(s)	226, 274, 569, 1037, 1400
AclWI	GGATC	4 cut(s)	177, 205, 466, 972
AcoI	YGGCCR	1 cut(s)	55
AcsI	RAATTY	6 cut(s)	703, 869, 1291, 1317, 1644, 1734
AcyI	GRCGYC	1 cut(s)	1492
AfaI	GTAC	3 cut(s)	368, 610, 1527
AfiI	CCNNNNNNNGG	4 cut(s)	165, 201, 961, 1153
AflII	CTTAAG	1 cut(s)	635
AflIII	ACRYGT	1 cut(s)	363
AhdI	GACNNNNNGTC	2 cut(s)	912, 1541
AjiI	CACGTC	1 cut(s)	364
AjnI	CCWGG	6 cut(s)	107, 164, 527, 1286, 1545, 1791
AjuI	GAANNNNNNNTTGG	2 cut(s)	1347, 1379
Alw21I	GWGCWC	1 cut(s)	829
Alw26I	GTCTC	5 cut(s)	42, 265, 518, 544, 1381
Alw44I	GTGCAC	1 cut(s)	825
AlwI	GGATC	4 cut(s)	177, 205, 466, 972
Ama87I	CYCGRG	2 cut(s)	83, 377
AoxI	GGCC	4 cut(s)	55, 72, 420, 1255
ApaLI	GTGCAC	1 cut(s)	825
ApeKI	GCWGC	9 cut(s)	517, 1161, 1312, 1342, 1408, 1426, 1468, 1636, 1639
ApoI	RAATTY	6 cut(s)	703, 869, 1291, 1317, 1644, 1734
ArsI	GACNNNNNNTTYG	2 cut(s)	243, 275
AseI	ATTAAT	1 cut(s)	1799
Asp700I	GAANNNNTTC	2 cut(s)	399, 1223
AspA2I	CCTAGG	1 cut(s)	200
AspLEI	GCGC	3 cut(s)	105, 230, 417
AspS9I	GGNCC	2 cut(s)	1256, 1543
AsuC2I	CCSGG	1 cut(s)	1066
AvaI	CYCGRG	2 cut(s)	83, 377
AvaII	GGWCC	1 cut(s)	1543
AvrII	CCTAGG	1 cut(s)	200
AxyI	CCTNAGG	1 cut(s)	897
BaeGI	GKGCMC	2 cut(s)	238, 829
BanII	GRGCYC	2 cut(s)	208, 1768
BauI	CACGAG	1 cut(s)	1506
BbsI	GAAGAC	1 cut(s)	1495
Bbv12I	GWGCWC	1 cut(s)	829
BbvI	GCAGC	9 cut(s)	504, 1173, 1324, 1354, 1420, 1438, 1480, 1648, 1651
BccI	CCATC	7 cut(s)	222, 743, 1274, 1305, 1468, 1507, 1573
BceAI	ACGGC	3 cut(s)	42, 70, 302
BcgI	CGANNNNNNTGC	4 cut(s)	94, 128, 1375, 1409
BciT130I	CCWGG	6 cut(s)	109, 166, 529, 1288, 1547, 1793
BclI	TGATCA	2 cut(s)	766, 1267
BcnI	CCSGG	1 cut(s)	1066
BcoDI	GTCTC	5 cut(s)	42, 265, 518, 544, 1381
BfaI	CTAG	5 cut(s)	6, 201, 713, 909, 1262
BfmI	CTRYAG	1 cut(s)	1002
BfrI	CTTAAG	1 cut(s)	635
BlnI	CCTAGG	1 cut(s)	200
BlpI	GCTNAGC	1 cut(s)	1133
Bme1390I	CCNGG	7 cut(s)	109, 166, 529, 1066, 1288, 1547, 1793
Bme18I	GGWCC	1 cut(s)	1543
BmeRI	GACNNNNNGTC	2 cut(s)	912, 1541
BmeT110I	CYCGRG	2 cut(s)	83, 377
BmgBI	CACGTC	1 cut(s)	364
BmgT120I	GGNCC	2 cut(s)	1256, 1543
BmiI	GGNNCC	2 cut(s)	1096, 1285
BmrFI	CCNGG	7 cut(s)	109, 166, 529, 1066, 1288, 1547, 1793
BmsI	GCATC	6 cut(s)	731, 785, 1059, 1395, 1405, 1801
BpiI	GAAGAC	1 cut(s)	1495
BpmI	CTGGAG	2 cut(s)	597, 1270
Bpu1102I	GCTNAGC	1 cut(s)	1133
BpuEI	CTTGAG	1 cut(s)	947
BpuMI	CCSGG	1 cut(s)	1066
BsaHI	GRCGYC	1 cut(s)	1492
BsaI	GGTCTC	1 cut(s)	518
BsaJI	CCNNGG	5 cut(s)	58, 165, 200, 497, 1578
BsaXI	ACNNNNNCTCC	2 cut(s)	134, 164
Bsc4I	CCNNNNNNNGG	4 cut(s)	165, 201, 961, 1153
Bse118I	RCCGGY	1 cut(s)	1751
Bse1I	ACTGG	1 cut(s)	1772
Bse21I	CCTNAGG	1 cut(s)	897
BseBI	CCWGG	6 cut(s)	109, 166, 529, 1288, 1547, 1793
BseDI	CCNNGG	5 cut(s)	58, 165, 200, 497, 1578
BseGI	GGATG	4 cut(s)	1074, 1285, 1396, 1615
BseLI	CCNNNNNNNGG	4 cut(s)	165, 201, 961, 1153
BseMII	CTCAG	7 cut(s)	28, 221, 513, 911, 1113, 1139, 1700
BseNI	ACTGG	1 cut(s)	1772
BseRI	GAGGAG	3 cut(s)	142, 230, 632
BseSI	GKGCMC	2 cut(s)	238, 829
BseX3I	CGGCCG	1 cut(s)	55
BseXI	GCAGC	9 cut(s)	504, 1173, 1324, 1354, 1420, 1438, 1480, 1648, 1651
BseYI	CCCAGC	1 cut(s)	324
BsgI	GTGCAG	1 cut(s)	355
Bsh1236I	CGCG	2 cut(s)	228, 417
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	4 cut(s)	57, 74, 422, 1257
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	1 cut(s)	829
BsiHKCI	CYCGRG	2 cut(s)	83, 377
BsiSI	CCGG	2 cut(s)	1066, 1752
BslFI	GGGAC	3 cut(s)	182, 900, 1664
BslI	CCNNNNNNNGG	4 cut(s)	165, 201, 961, 1153
BsmAI	GTCTC	5 cut(s)	42, 265, 518, 544, 1381
BsmBI	CGTCTC	2 cut(s)	42, 265
BsmFI	GGGAC	3 cut(s)	182, 900, 1664
BsmI	GAATGC	4 cut(s)	9, 671, 1332, 1488
BsnI	GGCC	4 cut(s)	57, 74, 422, 1257
Bso31I	GGTCTC	1 cut(s)	518
BsoBI	CYCGRG	2 cut(s)	83, 377
Bsp1286I	GDGCHC	4 cut(s)	208, 238, 829, 1768
Bsp143I	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
Bsp1720I	GCTNAGC	1 cut(s)	1133
Bsp19I	CCATGG	1 cut(s)	1578
BspACI	CCGC	5 cut(s)	226, 274, 569, 1037, 1400
BspANI	GGCC	4 cut(s)	57, 74, 422, 1257
BspCNI	CTCAG	7 cut(s)	27, 220, 514, 910, 1112, 1138, 1699
BspFNI	CGCG	2 cut(s)	228, 417
BspHI	TCATGA	2 cut(s)	769, 1027
BspLI	GGNNCC	2 cut(s)	1096, 1285
BspMAI	CTGCAG	1 cut(s)	1006
BspPI	GGATC	4 cut(s)	177, 205, 466, 972
BspQI	GCTCTTC	1 cut(s)	507
BspTI	CTTAAG	1 cut(s)	635
BspTNI	GGTCTC	1 cut(s)	518
BsrFI	RCCGGY	1 cut(s)	1751
BsrI	ACTGG	1 cut(s)	1772
BssAI	RCCGGY	1 cut(s)	1751
BssECI	CCNNGG	5 cut(s)	58, 165, 200, 497, 1578
BssMI	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
BssNI	GRCGYC	1 cut(s)	1492
BssSI	CACGAG	1 cut(s)	1506
BssT1I	CCWWGG	2 cut(s)	200, 1578
Bst2BI	CACGAG	1 cut(s)	1506
Bst2UI	CCWGG	6 cut(s)	109, 166, 529, 1288, 1547, 1793
Bst4CI	ACNGT	5 cut(s)	812, 1044, 1237, 1338, 1601
Bst6I	CTCTTC	5 cut(s)	248, 272, 304, 391, 507
BstACI	GRCGYC	1 cut(s)	1492
BstAFI	CTTAAG	1 cut(s)	635
BstC8I	GCNNGC	6 cut(s)	72, 256, 315, 354, 642, 1035
BstDEI	CTNAG	9 cut(s)	14, 207, 522, 897, 1099, 1125, 1133, 1686, 1760
BstDSI	CCRYGG	2 cut(s)	58, 1578
BstF5I	GGATG	4 cut(s)	1074, 1285, 1396, 1615
BstFNI	CGCG	2 cut(s)	228, 417
BstHHI	GCGC	3 cut(s)	105, 230, 417
BstKTI	GATC	7 cut(s)	185, 213, 461, 685, 769, 967, 1270
BstMAI	GTCTC	5 cut(s)	42, 265, 518, 544, 1381
BstMBI	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
BstMCI	CGRYCG	1 cut(s)	58
BstMWI	GCNNNNNNNGC	9 cut(s)	109, 931, 1348, 1408, 1417, 1426, 1459, 1468, 1633
BstNI	CCWGG	6 cut(s)	109, 166, 529, 1288, 1547, 1793
BstNSI	RCATGY	1 cut(s)	356
BstSCI	CCNGG	7 cut(s)	107, 164, 527, 1064, 1286, 1545, 1791
BstSFI	CTRYAG	1 cut(s)	1002
BstSLI	GKGCMC	2 cut(s)	238, 829
BstUI	CGCG	2 cut(s)	228, 417
BstV1I	GCAGC	9 cut(s)	504, 1173, 1324, 1354, 1420, 1438, 1480, 1648, 1651
BstV2I	GAAGAC	1 cut(s)	1495
BstX2I	RGATCY	1 cut(s)	210
BstYI	RGATCY	1 cut(s)	210
BstZI	CGGCCG	1 cut(s)	55
Bsu36I	CCTNAGG	1 cut(s)	897
BsuRI	GGCC	4 cut(s)	57, 74, 422, 1257
BtgI	CCRYGG	2 cut(s)	58, 1578
BtrI	CACGTC	1 cut(s)	364
BtsCI	GGATG	4 cut(s)	1074, 1285, 1396, 1615
BtsI	GCAGTG	1 cut(s)	1202
BtsIMutI	CAGTG	3 cut(s)	1202, 1242, 1779
Cac8I	GCNNGC	6 cut(s)	72, 256, 315, 354, 642, 1035
CciI	TCATGA	2 cut(s)	769, 1027
CfoI	GCGC	3 cut(s)	105, 230, 417
Cfr10I	RCCGGY	1 cut(s)	1751
Cfr13I	GGNCC	2 cut(s)	1256, 1543
CseI	GACGC	1 cut(s)	247
CsiI	ACCWGGT	1 cut(s)	527
Csp6I	GTAC	3 cut(s)	367, 609, 1526
CviQI	GTAC	3 cut(s)	367, 609, 1526
DdeI	CTNAG	9 cut(s)	14, 207, 522, 897, 1099, 1125, 1133, 1686, 1760
DpnI	GATC	7 cut(s)	184, 212, 460, 684, 768, 966, 1269
DpnII	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
DraI	TTTAAA	1 cut(s)	505
DriI	GACNNNNNGTC	2 cut(s)	912, 1541
EaeI	YGGCCR	1 cut(s)	55
EagI	CGGCCG	1 cut(s)	55
Eam1104I	CTCTTC	5 cut(s)	248, 272, 304, 391, 507
Eam1105I	GACNNNNNGTC	2 cut(s)	912, 1541
EarI	CTCTTC	5 cut(s)	248, 272, 304, 391, 507
EciI	GGCGGA	1 cut(s)	263
EclXI	CGGCCG	1 cut(s)	55
Eco130I	CCWWGG	2 cut(s)	200, 1578
Eco147I	AGGCCT	1 cut(s)	422
Eco24I	GRGCYC	2 cut(s)	208, 1768
Eco31I	GGTCTC	1 cut(s)	518
Eco32I	GATATC	1 cut(s)	1713
Eco47I	GGWCC	1 cut(s)	1543
Eco52I	CGGCCG	1 cut(s)	55
Eco81I	CCTNAGG	1 cut(s)	897
Eco88I	CYCGRG	2 cut(s)	83, 377
EcoRII	CCWGG	6 cut(s)	107, 164, 527, 1286, 1545, 1791
EcoRV	GATATC	1 cut(s)	1713
EcoT14I	CCWWGG	2 cut(s)	200, 1578
EcoT22I	ATGCAT	2 cut(s)	724, 1398
EcoT38I	GRGCYC	2 cut(s)	208, 1768
ErhI	CCWWGG	2 cut(s)	200, 1578
Esp3I	CGTCTC	2 cut(s)	42, 265
FaqI	GGGAC	3 cut(s)	182, 900, 1664
FbaI	TGATCA	2 cut(s)	766, 1267
FokI	GGATG	4 cut(s)	1081, 1292, 1383, 1602
FriOI	GRGCYC	2 cut(s)	208, 1768
FspBI	CTAG	5 cut(s)	6, 201, 713, 909, 1262
GlaI	GCGC	3 cut(s)	104, 229, 416
GsaI	CCCAGC	1 cut(s)	328
GsuI	CTGGAG	2 cut(s)	597, 1270
HaeIII	GGCC	4 cut(s)	57, 74, 422, 1257
HapII	CCGG	2 cut(s)	1066, 1752
HgaI	GACGC	1 cut(s)	247
HhaI	GCGC	3 cut(s)	105, 230, 417
Hin1I	GRCGYC	1 cut(s)	1492
Hin6I	GCGC	3 cut(s)	103, 228, 415
HinP1I	GCGC	3 cut(s)	103, 228, 415
HincII	GTYRAC	1 cut(s)	1496
HindII	GTYRAC	1 cut(s)	1496
HindIII	AAGCTT	2 cut(s)	638, 976
HpaII	CCGG	2 cut(s)	1066, 1752
Hpy166II	GTNNAC	5 cut(s)	142, 367, 801, 827, 1496
Hpy188I	TCNGA	9 cut(s)	47, 187, 210, 286, 478, 601, 1102, 1570, 1834
Hpy8I	GTNNAC	5 cut(s)	142, 367, 801, 827, 1496
Hpy99I	CGWCG	2 cut(s)	56, 191
HpyCH4III	ACNGT	5 cut(s)	812, 1044, 1237, 1338, 1601
HpyCH4IV	ACGT	6 cut(s)	96, 363, 607, 803, 890, 1492
HpyF10VI	GCNNNNNNNGC	9 cut(s)	109, 931, 1348, 1408, 1417, 1426, 1459, 1468, 1633
HpyF3I	CTNAG	9 cut(s)	14, 207, 522, 897, 1099, 1125, 1133, 1686, 1760
HpySE526I	ACGT	6 cut(s)	96, 363, 607, 803, 890, 1492
Hsp92I	GRCGYC	1 cut(s)	1492
HspAI	GCGC	3 cut(s)	103, 228, 415
Ksp22I	TGATCA	2 cut(s)	766, 1267
Kzo9I	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
LguI	GCTCTTC	1 cut(s)	507
LmnI	GCTCC	2 cut(s)	1289, 1567
Lsp1109I	GCAGC	9 cut(s)	504, 1173, 1324, 1354, 1420, 1438, 1480, 1648, 1651
LweI	GCATC	6 cut(s)	731, 785, 1059, 1395, 1405, 1801
MabI	ACCWGGT	1 cut(s)	527
MaeI	CTAG	5 cut(s)	6, 201, 713, 909, 1262
MaeII	ACGT	6 cut(s)	96, 363, 607, 803, 890, 1492
MaeIII	GTNAC	4 cut(s)	891, 1184, 1332, 1572
MalI	GATC	7 cut(s)	184, 212, 460, 684, 768, 966, 1269
MboI	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
MfeI	CAATTG	4 cut(s)	762, 1110, 1206, 1622
MflI	RGATCY	1 cut(s)	210
MhlI	GDGCHC	4 cut(s)	208, 238, 829, 1768
MlyI	GAGTC	5 cut(s)	95, 113, 164, 185, 922
MmeI	TCCRAC	3 cut(s)	147, 210, 244
Mph1103I	ATGCAT	2 cut(s)	724, 1398
MroXI	GAANNNNTTC	2 cut(s)	399, 1223
MseI	TTAA	4 cut(s)	504, 636, 957, 1799
MslI	CAYNNNNRTG	1 cut(s)	357
MspCI	CTTAAG	1 cut(s)	635
MspI	CCGG	2 cut(s)	1066, 1752
MspR9I	CCNGG	7 cut(s)	109, 166, 529, 1066, 1288, 1547, 1793
MunI	CAATTG	4 cut(s)	762, 1110, 1206, 1622
Mva1269I	GAATGC	4 cut(s)	9, 671, 1332, 1488
MvaI	CCWGG	6 cut(s)	109, 166, 529, 1288, 1547, 1793
MvnI	CGCG	2 cut(s)	228, 417
MwoI	GCNNNNNNNGC	9 cut(s)	109, 931, 1348, 1408, 1417, 1426, 1459, 1468, 1633
NciI	CCSGG	1 cut(s)	1066
NcoI	CCATGG	1 cut(s)	1578
NdeII	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
NlaIV	GGNNCC	2 cut(s)	1096, 1285
NmeAIII	GCCGAG	1 cut(s)	93
NmuCI	GTSAC	1 cut(s)	1332
NsiI	ATGCAT	2 cut(s)	724, 1398
NspI	RCATGY	1 cut(s)	356
PaeI	GCATGC	1 cut(s)	356
PaeR7I	CTCGAG	2 cut(s)	83, 377
PagI	TCATGA	2 cut(s)	769, 1027
PceI	AGGCCT	1 cut(s)	422
PciSI	GCTCTTC	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	4 cut(s)	9, 671, 1332, 1488
PdmI	GAANNNNTTC	2 cut(s)	399, 1223
PfoI	TCCNGGA	2 cut(s)	1286, 1791
PleI	GAGTC	5 cut(s)	94, 113, 164, 185, 921
PpsI	GAGTC	5 cut(s)	94, 113, 164, 185, 921
PshBI	ATTAAT	1 cut(s)	1799
Psp6I	CCWGG	6 cut(s)	107, 164, 527, 1286, 1545, 1791
PspFI	CCCAGC	1 cut(s)	324
PspGI	CCWGG	6 cut(s)	107, 164, 527, 1286, 1545, 1791
PspN4I	GGNNCC	2 cut(s)	1096, 1285
PspPI	GGNCC	2 cut(s)	1256, 1543
PspXI	VCTCGAGB	1 cut(s)	83
PstI	CTGCAG	1 cut(s)	1006
PsuI	RGATCY	1 cut(s)	210
RsaI	GTAC	3 cut(s)	368, 610, 1527
RsaNI	GTAC	3 cut(s)	367, 609, 1526
RseI	CAYNNNNRTG	1 cut(s)	357
SapI	GCTCTTC	1 cut(s)	507
SaqAI	TTAA	4 cut(s)	504, 636, 957, 1799
Sau3AI	GATC	7 cut(s)	182, 210, 458, 682, 766, 964, 1267
Sau96I	GGNCC	2 cut(s)	1256, 1543
SchI	GAGTC	5 cut(s)	95, 113, 164, 185, 922
ScrFI	CCNGG	7 cut(s)	109, 166, 529, 1066, 1288, 1547, 1793
SduI	GDGCHC	4 cut(s)	208, 238, 829, 1768
SexAI	ACCWGGT	1 cut(s)	527
SfaNI	GCATC	6 cut(s)	731, 785, 1059, 1395, 1405, 1801
SfcI	CTRYAG	1 cut(s)	1002
Sfr274I	CTCGAG	2 cut(s)	83, 377
SgrAI	CRCCGGYG	1 cut(s)	1751
SinI	GGWCC	1 cut(s)	1543
SlaI	CTCGAG	2 cut(s)	83, 377
SmiMI	CAYNNNNRTG	1 cut(s)	357
SmlI	CTYRAG	4 cut(s)	83, 377, 635, 926
SmoI	CTYRAG	4 cut(s)	83, 377, 635, 926
SphI	GCATGC	1 cut(s)	356
SseBI	AGGCCT	1 cut(s)	422
SsiI	CCGC	5 cut(s)	226, 274, 569, 1037, 1400
SspMI	CTAG	5 cut(s)	6, 201, 713, 909, 1262
StuI	AGGCCT	1 cut(s)	422
StyD4I	CCNGG	7 cut(s)	107, 164, 527, 1064, 1286, 1545, 1791
StyI	CCWWGG	2 cut(s)	200, 1578
TaaI	ACNGT	5 cut(s)	812, 1044, 1237, 1338, 1601
TaiI	ACGT	6 cut(s)	99, 366, 610, 806, 893, 1495
TaqI	TCGA	6 cut(s)	84, 246, 378, 1366, 1385, 1768
TaqII	GACCGA	1 cut(s)	606
TatI	WGTACW	1 cut(s)	366
TauI	GCSGC	1 cut(s)	1040
Tru1I	TTAA	4 cut(s)	504, 636, 957, 1799
Tru9I	TTAA	4 cut(s)	504, 636, 957, 1799
TscAI	CASTG	3 cut(s)	1202, 1242, 1779
TseFI	GTSAC	1 cut(s)	1332
TseI	GCWGC	9 cut(s)	517, 1161, 1312, 1342, 1408, 1426, 1468, 1636, 1639
Tsp45I	GTSAC	1 cut(s)	1332
TspDTI	ATGAA	7 cut(s)	166, 525, 786, 854, 1310, 1806, 1851
TspGWI	ACGGA	1 cut(s)	1136
TspRI	CASTG	3 cut(s)	1202, 1242, 1779
Vha464I	CTTAAG	1 cut(s)	635
VneI	GTGCAC	1 cut(s)	825
VpaK11BI	GGWCC	1 cut(s)	1543
VspI	ATTAAT	1 cut(s)	1799
XapI	RAATTY	6 cut(s)	703, 869, 1291, 1317, 1644, 1734
XceI	RCATGY	1 cut(s)	356
XhoI	CTCGAG	2 cut(s)	83, 377
XmaJI	CCTAGG	1 cut(s)	200
XmnI	GAANNNNTTC	2 cut(s)	399, 1223
XspI	CTAG	5 cut(s)	6, 201, 713, 909, 1262
ZraI	GACGTC	1 cut(s)	1493
Zsp2I	ATGCAT	2 cut(s)	724, 1398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.