Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002638

Physical Location & Seq

Genomic Coordinates Forward (+)

33535605 .. 33538770

Gene Structure 3166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGTACGGCAGGGATCCATGGGGCGGGCCGCTGGAGATCAACACGGCGGACTCGGCCACCGACGACGACCGCAGCCGGAACCTGCAGGACCTCGACCGGGCGGCGCTGTCGTCCCGGCCGCTTGACGAGACGCAGCAGAGCTGGCTGCTGGGCCCCACCGGGGAGCAGAAGAAGAAGAAGTACGTGGATCTGGGATGCGTCATCGTCAGCCGCAAGATCTTTATCTGGACGGTAGGGACGCTCCTCGTCTCCGGCTTGCTGGCCGGACTGATCGTCCTCATCGTCAAGACCGTGCCGCGTCACCACCACGGCAAGGCTCCTCCGGACAACTACACTCTCGCTCTCCACAAGGCTCTCATGTTCTTCAACGCTCAGAAATCTGGTAAGCTTCCGAAGCACAACAATGTTTCGTGGAGGGGAAACTCGTGCGTCAAGGATGGTGACCCCGGCACCATGTTCAAGGATCTGTCGGGTGGTTACTATGATGCTGGAGATGCCATCAAGTTCAACTTCCCTCAGTCATTCGCCATGACTCTGCTGAGCTGGAGCGTCATCGAGTACAGTGCCAAGTACGAAGCCGCTGGGGAACTAGCTCATGCAAAGGAGCTCATCAAATGGGGCGCTGATTACTTCCTCAAGACCTTCAACCATACCGCTGATACAATCGACACCATGGTTTCGCAGGTTGGGTCAGGAGATACTTCTAAAGGGAGTACTACTCCTAATGATCACTATTGCTGGAATCGACCCGAAGACATTGATTATAAACGCCCTGTGACTACTACCAGTAGTTGCTCTGATCTTGCATCTGAGATGGCTGCAGCTTTGGCTGCCGCATCCATAGTGTTTAAGGATAACAAGGCCTACTCGCAGAAACTTGTGCACGGCGCCAAAACGCTCTTCTCGTTCGGAAGGGAACGAGGAAGAGGCTTCTACAGTGCTCCTGGTTCAGAGGCTTCCGTCTTTTACAATTCTACGTTGTACTGGGACGAATTCGTGTGGGGTGCAGCTTGGATGTATTATGCCACCGGGAATAACTCTTATCTTACTCTAGCAACACATCCTACTCTTGCCAAGCATGCTGGTGCCTTCTGGGGCGGCCCTGATTATGGAGTATTCAGCTGGGACAACAAACTTGCTGGTGCACAGGTGCTTCTGACCCGTTTGAGGTTATTCTTGAGCCCTGGTTACCCATATGAAGAAATCTTGAGGACATTTCAGAATCAGACTAGCATAGTCATGTGCTCATACCTGCCAATATTCACATCCTTTAATAGAACCAAAGGTGGCTTGATCCAGTTGAATCATGGAAGGCCTCAACCACTTCAATATGTGGTGAATGCAGCCTTCTTAGCAACCTTGTTCAGTGATTATCTTGATGCTGCCGATACTCCTGGATGGTATTGTGGACCCAACTTCTATTCCACTGATGTGTTGCGTGATTTTGCCAAGTTTCAGATTGATTACATTCTTGGCAAGAATCCCCGGAAAATGAGCTATGTTACAGGTTTTGGCAATCATTACCCAAAACAAGTGCACCATAGAGGTGCATCGATTCCCAAGAATAAGATCAAATACAATTGCAAAGGGGTTGGAAATGGAGGGATTCGAAAAAGCCAAACCCAAATATTATTGAAGGTGCCATGGTGGCTGGACCTGACAAAAAAGATGGTTTCCATGATGTTCGTACTAATTACAATTACACAGAGCCAACTCTTGCTGGAAATGCAGGTTTGGTATTTGCGCTTGTTGGTTTGTCTGGAGACAAGTCTGTTGGTATTGATAAAAATACCATTTTCTCCGCGGTTCCCCCAATGTTTCCAACTCCACCACCTCCTCCGGCACCCTGGAAACCTTGATATGCCCAAGCAGTCTCCGATGTTCTTTTGTGTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008152 GO:0008810 GO:0009058 GO:0009059 GO:0009250 GO:0009504 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042538 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_9

Protein Analysis

632

Amino Acids

70.94

Weight (kDa)

9.12

Isoelectric Point (pI)

31.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_9	PF00759	111 - 523	6.9e-124	Glycosyl hydrolase family 9

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24260 AT4G24260 AT4G24260 AT5G49720
fragaria_vesca	FvH4_5g27130 FvH4_5g27130 FvH4_5g27130 FvH4_5g27130
malus_domestica	MD04G1170800.v1.1 MD08G1250900.v1.1 MD15G1445800.v1.1
prunus_persica	Prupe.1G587900_v2.0.a1 Prupe.3G082700_v2.0.a1
pyrus_communis	pycom04g15140 pycom08g21760 pycom15g39260 pycom15g39270
rosa_chinensis	RchiOBHm_Chr7g0218131
rosa_laevigata	RLG00000002397 RLG00000003204 RLG00000029460
rosa_multiflora	Rmu_sc0000054.1_g000022 Rmu_sc0003627.1_g000012 Rmu_sc0031732.1_g000002
rosa_roxburghii	Rroxscaffold_3G00233940 Rroxscaffold_3G00241280
rosa_rugosa	Rorug01G0072800 Rorug02G0384500 Rorug04G0442400 Rorug07G0174400
rosa_samantha	Rh4CG311700 Rh4DG293000 Rh6BG152200 Rh6DG136400 Rh7AG316800 Rh7BG307900 Rh7BG308000 Rh7CG333700 Rh7DG315700
rosa_wichuraiana	Rw7G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	765
Acc36I	ACCTGC	4 cut(s)	90, 673, 1260, 1720
AccB1I	GGYRCC	5 cut(s)	449, 887, 1085, 1639, 1842
AccII	CGCG	2 cut(s)	298, 1804
AccIII	TCCGGA	1 cut(s)	322
AclWI	GGATC	5 cut(s)	8, 21, 195, 471, 1288
AcoI	YGGCCR	3 cut(s)	54, 116, 261
AcsI	RAATTY	1 cut(s)	992
AcyI	GRCGYC	1 cut(s)	888
AfaI	GTAC	7 cut(s)	5, 182, 560, 572, 715, 983, 1689
AfiI	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
AgsI	TTSAA	7 cut(s)	367, 460, 508, 646, 1303, 1328, 1636
AhdI	GACNNNNNGTC	1 cut(s)	272
AjnI	CCWGG	4 cut(s)	943, 1183, 1393, 1846
AjuI	GAANNNNNNNTTGG	2 cut(s)	884, 916
AleI	CACNNNNGTG	1 cut(s)	1430
AluBI	AGCT	9 cut(s)	141, 388, 543, 593, 607, 824, 1010, 1122, 1497
AluI	AGCT	9 cut(s)	141, 388, 543, 593, 607, 824, 1010, 1122, 1497
Alw21I	GWGCWC	6 cut(s)	609, 885, 943, 1147, 1247, 1539
Alw26I	GTCTC	4 cut(s)	122, 253, 1757, 1878
Alw44I	GTGCAC	3 cut(s)	881, 1143, 1535
AlwI	GGATC	5 cut(s)	8, 21, 195, 471, 1288
Aor13HI	TCCGGA	1 cut(s)	322
AoxI	GGCC	8 cut(s)	26, 54, 116, 151, 261, 861, 1099, 1313
ApaI	GGGCCC	1 cut(s)	155
ApaLI	GTGCAC	3 cut(s)	881, 1143, 1535
ApeKI	GCWGC	9 cut(s)	72, 133, 145, 818, 821, 830, 1007, 1343, 1382
ApoI	RAATTY	1 cut(s)	992
AspLEI	GCGC	4 cut(s)	106, 623, 890, 1746
AspS9I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1654
AsuC2I	CCSGG	6 cut(s)	98, 115, 160, 447, 1030, 1486
AsuHPI	GGTGA	3 cut(s)	293, 452, 1348
AsuII	TTCGAA	1 cut(s)	1609
AvaII	GGWCC	3 cut(s)	88, 1409, 1654
BaeGI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BamHI	GGATCC	1 cut(s)	13
BanI	GGYRCC	5 cut(s)	449, 887, 1085, 1639, 1842
BanII	GRGCYC	3 cut(s)	155, 609, 1184
BarI	GAAGNNNNNNTAC	2 cut(s)	164, 196
BauI	CACGAG	1 cut(s)	424
BbsI	GAAGAC	1 cut(s)	759
Bbv12I	GWGCWC	6 cut(s)	609, 885, 943, 1147, 1247, 1539
BbvI	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 1019, 1355, 1369
BccI	CCATC	5 cut(s)	431, 506, 808, 1392, 1663
BceAI	ACGGC	4 cut(s)	22, 60, 325, 901
BcgI	CGANNNNNNTGC	2 cut(s)	545, 579
BciT130I	CCWGG	4 cut(s)	945, 1185, 1395, 1848
BclI	TGATCA	1 cut(s)	727
BcnI	CCSGG	6 cut(s)	98, 115, 160, 447, 1030, 1486
BcoDI	GTCTC	4 cut(s)	122, 253, 1757, 1878
BfaI	CTAG	3 cut(s)	590, 1052, 1230
BfmI	CTRYAG	3 cut(s)	83, 819, 934
BfoI	RGCGCY	3 cut(s)	107, 624, 891
BfuAI	ACCTGC	4 cut(s)	90, 673, 1260, 1720
BglI	GCCNNNNNGGC	1 cut(s)	1648
BglII	AGATCT	1 cut(s)	216
BlpI	GCTNAGC	1 cut(s)	539
BmcAI	AGTACT	1 cut(s)	715
Bme18I	GGWCC	3 cut(s)	88, 1409, 1654
BmeRI	GACNNNNNGTC	1 cut(s)	272
BmgT120I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1654
BmrI	ACTGGG	1 cut(s)	994
BmsI	GCATC	7 cut(s)	185, 475, 484, 815, 845, 1369, 1559
BmuI	ACTGGG	1 cut(s)	994
BpiI	GAAGAC	1 cut(s)	759
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
BpmI	CTGGAG	4 cut(s)	53, 510, 565, 1781
Bpu1102I	GCTNAGC	1 cut(s)	539
Bpu14I	TTCGAA	1 cut(s)	1609
BpuEI	CTTGAG	3 cut(s)	620, 1198, 1228
BpuMI	CCSGG	6 cut(s)	98, 115, 160, 447, 1030, 1486
Bsa29I	ATCGAT	1 cut(s)	1553
BsaAI	YACGTR	1 cut(s)	184
BsaBI	GATNNNNATC	1 cut(s)	221
BsaHI	GRCGYC	1 cut(s)	888
BsaWI	WCCGGW	1 cut(s)	322
Bsc4I	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
Bse1I	ACTGG	3 cut(s)	786, 989, 1297
Bse8I	GATNNNNATC	1 cut(s)	221
BseAI	TCCGGA	1 cut(s)	322
BseBI	CCWGG	4 cut(s)	945, 1185, 1395, 1848
BseCI	ATCGAT	1 cut(s)	1553
BseGI	GGATG	7 cut(s)	200, 442, 836, 1020, 1060, 1265, 1403
BseJI	GATNNNNATC	1 cut(s)	221
BseLI	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
BseMII	CTCAG	4 cut(s)	386, 530, 530, 801
BseNI	ACTGG	3 cut(s)	786, 989, 1297
BseRI	GAGGAG	3 cut(s)	233, 309, 1826
BseSI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BseX3I	CGGCCG	1 cut(s)	116
BseXI	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 1019, 1355, 1369
BseYI	CCCAGC	3 cut(s)	148, 581, 1122
BsgI	GTGCAG	1 cut(s)	1026
Bsh1236I	CGCG	2 cut(s)	298, 1804
Bsh1285I	CGRYCG	3 cut(s)	70, 97, 119
BshFI	GGCC	8 cut(s)	28, 56, 118, 153, 263, 863, 1101, 1315
BshNI	GGYRCC	5 cut(s)	449, 887, 1085, 1639, 1842
BshVI	ATCGAT	1 cut(s)	1553
BsiEI	CGRYCG	3 cut(s)	70, 97, 119
BsiHKAI	GWGCWC	6 cut(s)	609, 885, 943, 1147, 1247, 1539
BslFI	GGGAC	4 cut(s)	97, 250, 1001, 1139
BslI	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
BsmAI	GTCTC	4 cut(s)	122, 253, 1757, 1878
BsmBI	CGTCTC	2 cut(s)	122, 253
BsmFI	GGGAC	4 cut(s)	97, 250, 1001, 1139
BsmI	GAATGC	1 cut(s)	1345
BsnI	GGCC	8 cut(s)	28, 56, 118, 153, 263, 863, 1101, 1315
Bsp119I	TTCGAA	1 cut(s)	1609
Bsp120I	GGGCCC	1 cut(s)	151
Bsp1286I	GDGCHC	8 cut(s)	155, 609, 885, 943, 1147, 1184, 1247, 1539
Bsp13I	TCCGGA	1 cut(s)	322
Bsp1720I	GCTNAGC	1 cut(s)	539
Bsp19I	CCATGG	3 cut(s)	17, 672, 1643
BspANI	GGCC	8 cut(s)	28, 56, 118, 153, 263, 863, 1101, 1315
BspCNI	CTCAG	4 cut(s)	385, 529, 531, 802
BspDI	ATCGAT	1 cut(s)	1553
BspEI	TCCGGA	1 cut(s)	322
BspFNI	CGCG	2 cut(s)	298, 1804
BspMAI	CTGCAG	2 cut(s)	87, 823
BspMI	ACCTGC	4 cut(s)	90, 673, 1260, 1720
BspPI	GGATC	5 cut(s)	8, 21, 195, 471, 1288
BspQI	GCTCTTC	1 cut(s)	905
BspT104I	TTCGAA	1 cut(s)	1609
BspT107I	GGYRCC	5 cut(s)	449, 887, 1085, 1639, 1842
BsrI	ACTGG	3 cut(s)	786, 989, 1297
BssNI	GRCGYC	1 cut(s)	888
BssSI	CACGAG	1 cut(s)	424
BssT1I	CCWWGG	3 cut(s)	17, 672, 1643
Bst2BI	CACGAG	1 cut(s)	424
Bst2UI	CCWGG	4 cut(s)	945, 1185, 1395, 1848
Bst4CI	ACNGT	4 cut(s)	232, 292, 563, 938
Bst6I	CTCTTC	2 cut(s)	905, 919
BstACI	GRCGYC	1 cut(s)	888
BstBAI	YACGTR	1 cut(s)	184
BstBI	TTCGAA	1 cut(s)	1609
BstC8I	GCNNGC	5 cut(s)	26, 143, 257, 261, 1080
BstDEI	CTNAG	5 cut(s)	372, 516, 539, 810, 1351
BstDSI	CCRYGG	5 cut(s)	17, 307, 672, 1643, 1802
BstEII	GGTNACC	2 cut(s)	440, 1187
BstF5I	GGATG	7 cut(s)	200, 442, 836, 1020, 1060, 1265, 1403
BstFNI	CGCG	2 cut(s)	298, 1804
BstH2I	RGCGCY	3 cut(s)	107, 624, 891
BstHHI	GCGC	4 cut(s)	106, 623, 890, 1746
BstMAI	GTCTC	4 cut(s)	122, 253, 1757, 1878
BstMCI	CGRYCG	3 cut(s)	70, 97, 119
BstNI	CCWGG	4 cut(s)	945, 1185, 1395, 1848
BstNSI	RCATGY	1 cut(s)	1082
BstPI	GGTNACC	2 cut(s)	440, 1187
BstSFI	CTRYAG	3 cut(s)	83, 819, 934
BstSLI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BstUI	CGCG	2 cut(s)	298, 1804
BstV1I	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 1019, 1355, 1369
BstV2I	GAAGAC	1 cut(s)	759
BstX2I	RGATCY	4 cut(s)	13, 187, 216, 463
BstYI	RGATCY	4 cut(s)	13, 187, 216, 463
BstZI	CGGCCG	1 cut(s)	116
Bsu15I	ATCGAT	1 cut(s)	1553
BsuRI	GGCC	8 cut(s)	28, 56, 118, 153, 263, 863, 1101, 1315
BsuTUI	ATCGAT	1 cut(s)	1553
BtgI	CCRYGG	5 cut(s)	17, 307, 672, 1643, 1802
BtsCI	GGATG	7 cut(s)	200, 442, 836, 1020, 1060, 1265, 1403
BtsIMutI	CAGTG	4 cut(s)	568, 943, 1372, 1425
BveI	ACCTGC	4 cut(s)	90, 673, 1260, 1720
Cac8I	GCNNGC	5 cut(s)	26, 143, 257, 261, 1080
CfoI	GCGC	4 cut(s)	106, 623, 890, 1746
Cfr13I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1654
Cfr42I	CCGCGG	1 cut(s)	1805
ClaI	ATCGAT	1 cut(s)	1553
CseI	GACGC	6 cut(s)	139, 187, 247, 287, 418, 538
Csp6I	GTAC	7 cut(s)	4, 181, 559, 571, 714, 982, 1688
CviQI	GTAC	7 cut(s)	4, 181, 559, 571, 714, 982, 1688
DdeI	CTNAG	5 cut(s)	372, 516, 539, 810, 1351
DinI	GGCGCC	1 cut(s)	889
DriI	GACNNNNNGTC	1 cut(s)	272
EaeI	YGGCCR	3 cut(s)	54, 116, 261
EagI	CGGCCG	1 cut(s)	116
Eam1104I	CTCTTC	2 cut(s)	905, 919
Eam1105I	GACNNNNNGTC	1 cut(s)	272
EarI	CTCTTC	2 cut(s)	905, 919
EciI	GGCGGA	1 cut(s)	62
Ecl136II	GAGCTC	1 cut(s)	607
EclXI	CGGCCG	1 cut(s)	116
Eco130I	CCWWGG	3 cut(s)	17, 672, 1643
Eco147I	AGGCCT	2 cut(s)	863, 1315
Eco24I	GRGCYC	3 cut(s)	155, 609, 1184
Eco47I	GGWCC	3 cut(s)	88, 1409, 1654
Eco52I	CGGCCG	1 cut(s)	116
Eco53kI	GAGCTC	1 cut(s)	607
Eco91I	GGTNACC	2 cut(s)	440, 1187
EcoICRI	GAGCTC	1 cut(s)	607
EcoO109I	RGGNCCY	2 cut(s)	88, 152
EcoO65I	GGTNACC	2 cut(s)	440, 1187
EcoRI	GAATTC	1 cut(s)	992
EcoRII	CCWGG	4 cut(s)	943, 1183, 1393, 1846
EcoT14I	CCWWGG	3 cut(s)	17, 672, 1643
EcoT38I	GRGCYC	3 cut(s)	155, 609, 1184
EgeI	GGCGCC	1 cut(s)	889
EheI	GGCGCC	1 cut(s)	889
ErhI	CCWWGG	3 cut(s)	17, 672, 1643
Esp3I	CGTCTC	2 cut(s)	122, 253
FalI	AAGNNNNNCTT	2 cut(s)	494, 526
FaqI	GGGAC	4 cut(s)	97, 250, 1001, 1139
FauI	CCCGC	1 cut(s)	17
FauNDI	CATATG	1 cut(s)	1195
FbaI	TGATCA	1 cut(s)	727
FokI	GGATG	7 cut(s)	207, 449, 823, 1027, 1047, 1252, 1410
FriOI	GRGCYC	3 cut(s)	155, 609, 1184
FspBI	CTAG	3 cut(s)	590, 1052, 1230
GlaI	GCGC	4 cut(s)	105, 622, 889, 1745
GsaI	CCCAGC	3 cut(s)	152, 585, 1126
GsuI	CTGGAG	4 cut(s)	53, 510, 565, 1781
HaeII	RGCGCY	3 cut(s)	107, 624, 891
HaeIII	GGCC	8 cut(s)	28, 56, 118, 153, 263, 863, 1101, 1315
HgaI	GACGC	6 cut(s)	139, 187, 247, 287, 418, 538
HhaI	GCGC	4 cut(s)	106, 623, 890, 1746
Hin1I	GRCGYC	1 cut(s)	888
Hin6I	GCGC	4 cut(s)	104, 621, 888, 1744
HinP1I	GCGC	4 cut(s)	104, 621, 888, 1744
HindIII	AAGCTT	1 cut(s)	386
HinfI	GANTC	8 cut(s)	50, 532, 742, 1222, 1303, 1480, 1555, 1606
HphI	GGTGA	3 cut(s)	293, 452, 1348
Hpy166II	GTNNAC	4 cut(s)	883, 1145, 1409, 1537
Hpy188III	TCNNGA	9 cut(s)	226, 286, 323, 637, 693, 1177, 1207, 1376, 1760
Hpy8I	GTNNAC	4 cut(s)	883, 1145, 1409, 1537
Hpy99I	CGWCG	2 cut(s)	65, 68
HpyAV	CCTTC	6 cut(s)	652, 906, 1099, 1305, 1357, 1630
HpyCH4III	ACNGT	4 cut(s)	232, 292, 563, 938
HpyCH4IV	ACGT	2 cut(s)	183, 977
HpyF3I	CTNAG	5 cut(s)	372, 516, 539, 810, 1351
HpySE526I	ACGT	2 cut(s)	183, 977
Hsp92I	GRCGYC	1 cut(s)	888
HspAI	GCGC	4 cut(s)	104, 621, 888, 1744
KasI	GGCGCC	1 cut(s)	887
Kpn2I	TCCGGA	1 cut(s)	322
Ksp22I	TGATCA	1 cut(s)	727
KspI	CCGCGG	1 cut(s)	1805
LguI	GCTCTTC	1 cut(s)	905
LmnI	GCTCC	6 cut(s)	163, 246, 322, 546, 604, 946
Lsp1109I	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 1019, 1355, 1369
LweI	GCATC	7 cut(s)	185, 475, 484, 815, 845, 1369, 1559
MaeI	CTAG	3 cut(s)	590, 1052, 1230
MaeII	ACGT	2 cut(s)	183, 977
MaeIII	GTNAC	6 cut(s)	299, 440, 476, 775, 1187, 1501
MboII	GAAGA	8 cut(s)	181, 184, 187, 355, 764, 892, 936, 1211
MfeI	CAATTG	1 cut(s)	1579
MflI	RGATCY	4 cut(s)	13, 187, 216, 463
MhlI	GDGCHC	8 cut(s)	155, 609, 885, 943, 1147, 1184, 1247, 1539
MluCI	AATT	5 cut(s)	970, 992, 1579, 1692, 1698
Mly113I	GGCGCC	1 cut(s)	888
MlyI	GAGTC	2 cut(s)	44, 526
MmeI	TCCRAC	2 cut(s)	1573, 1846
MroI	TCCGGA	1 cut(s)	322
MseI	TTAA	2 cut(s)	849, 1272
MslI	CAYNNNNRTG	5 cut(s)	402, 1083, 1238, 1430, 1545
MspA1I	CMGCKG	5 cut(s)	31, 581, 656, 1122, 1804
MunI	CAATTG	1 cut(s)	1579
Mva1269I	GAATGC	1 cut(s)	1345
MvaI	CCWGG	4 cut(s)	945, 1185, 1395, 1848
MvnI	CGCG	2 cut(s)	298, 1804
NarI	GGCGCC	1 cut(s)	888
NciI	CCSGG	6 cut(s)	98, 115, 160, 447, 1030, 1486
NcoI	CCATGG	3 cut(s)	17, 672, 1643
NdeI	CATATG	1 cut(s)	1195
NmeAIII	GCCGAG	1 cut(s)	32
NmuCI	GTSAC	3 cut(s)	299, 440, 775
NspI	RCATGY	1 cut(s)	1082
NspV	TTCGAA	1 cut(s)	1609
OliI	CACNNNNGTG	1 cut(s)	1430
PaeI	GCATGC	1 cut(s)	1082
PceI	AGGCCT	2 cut(s)	863, 1315
PciSI	GCTCTTC	1 cut(s)	905
PcsI	WCGNNNNNNNCGW	3 cut(s)	279, 288, 902
PctI	GAATGC	1 cut(s)	1345
PfeI	GAWTC	6 cut(s)	742, 1222, 1303, 1480, 1555, 1606
PfoI	TCCNGGA	1 cut(s)	1393
PleI	GAGTC	2 cut(s)	44, 526
PluTI	GGCGCC	1 cut(s)	891
PpsI	GAGTC	2 cut(s)	44, 526
Ppu21I	YACGTR	1 cut(s)	184
PpuMI	RGGWCCY	1 cut(s)	88
PsiI	TTATAA	1 cut(s)	765
Psp124BI	GAGCTC	1 cut(s)	609
Psp5II	RGGWCCY	1 cut(s)	88
Psp6I	CCWGG	4 cut(s)	943, 1183, 1393, 1846
PspEI	GGTNACC	2 cut(s)	440, 1187
PspFI	CCCAGC	3 cut(s)	148, 581, 1122
PspGI	CCWGG	4 cut(s)	943, 1183, 1393, 1846
PspOMI	GGGCCC	1 cut(s)	151
PspPI	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1654
PspPPI	RGGWCCY	1 cut(s)	88
PstI	CTGCAG	2 cut(s)	87, 823
PsuI	RGATCY	4 cut(s)	13, 187, 216, 463
PvuII	CAGCTG	1 cut(s)	1122
RsaI	GTAC	7 cut(s)	5, 182, 560, 572, 715, 983, 1689
RsaNI	GTAC	7 cut(s)	4, 181, 559, 571, 714, 982, 1688
RseI	CAYNNNNRTG	5 cut(s)	402, 1083, 1238, 1430, 1545
SacI	GAGCTC	1 cut(s)	609
SacII	CCGCGG	1 cut(s)	1805
SapI	GCTCTTC	1 cut(s)	905
SaqAI	TTAA	2 cut(s)	849, 1272
Sau96I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1654
SbfI	CCTGCAGG	1 cut(s)	87
ScaI	AGTACT	1 cut(s)	715
SchI	GAGTC	2 cut(s)	44, 526
SdaI	CCTGCAGG	1 cut(s)	87
SduI	GDGCHC	8 cut(s)	155, 609, 885, 943, 1147, 1184, 1247, 1539
SfaNI	GCATC	7 cut(s)	185, 475, 484, 815, 845, 1369, 1559
SfcI	CTRYAG	3 cut(s)	83, 819, 934
SfoI	GGCGCC	1 cut(s)	889
Sfr303I	CCGCGG	1 cut(s)	1805
SfuI	TTCGAA	1 cut(s)	1609
SgrBI	CCGCGG	1 cut(s)	1805
SinI	GGWCC	3 cut(s)	88, 1409, 1654
SmiMI	CAYNNNNRTG	5 cut(s)	402, 1083, 1238, 1430, 1545
SmlI	CTYRAG	3 cut(s)	635, 1177, 1207
SmoI	CTYRAG	3 cut(s)	635, 1177, 1207
SphI	GCATGC	1 cut(s)	1082
Sse8387I	CCTGCAGG	1 cut(s)	87
Sse9I	AATT	5 cut(s)	970, 992, 1579, 1692, 1698
SseBI	AGGCCT	2 cut(s)	863, 1315
SspDI	GGCGCC	1 cut(s)	887
SspI	AATATT	2 cut(s)	1260, 1629
SspMI	CTAG	3 cut(s)	590, 1052, 1230
SstI	GAGCTC	1 cut(s)	609
StuI	AGGCCT	2 cut(s)	863, 1315
StyI	CCWWGG	3 cut(s)	17, 672, 1643
TaaI	ACNGT	4 cut(s)	232, 292, 563, 938
TaiI	ACGT	2 cut(s)	186, 980
TaqI	TCGA	6 cut(s)	93, 555, 666, 745, 1553, 1609
TasI	AATT	5 cut(s)	970, 992, 1579, 1692, 1698
TatI	WGTACW	3 cut(s)	558, 713, 981
TauI	GCSGC	8 cut(s)	31, 104, 121, 213, 298, 581, 836, 1101
TfiI	GAWTC	6 cut(s)	742, 1222, 1303, 1480, 1555, 1606
Tru1I	TTAA	2 cut(s)	849, 1272
Tru9I	TTAA	2 cut(s)	849, 1272
TscAI	CASTG	4 cut(s)	568, 943, 1372, 1432
TseFI	GTSAC	3 cut(s)	299, 440, 775
TseI	GCWGC	9 cut(s)	72, 133, 145, 818, 821, 830, 1007, 1343, 1382
Tsp45I	GTSAC	3 cut(s)	299, 440, 775
TspDTI	ATGAA	1 cut(s)	1212
TspGWI	ACGGA	1 cut(s)	949
TspRI	CASTG	4 cut(s)	568, 943, 1372, 1432
VneI	GTGCAC	3 cut(s)	881, 1143, 1535
VpaK11BI	GGWCC	3 cut(s)	88, 1409, 1654
XapI	RAATTY	1 cut(s)	992
XceI	RCATGY	1 cut(s)	1082
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XspI	CTAG	3 cut(s)	590, 1052, 1230
ZrmI	AGTACT	1 cut(s)	715

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.