Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0002638

Physical Location & Seq

Genomic Coordinates Reverse (-)

34127731 .. 34135204

Gene Structure 7474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G026810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3324 bp

ATGTACGGCAGGGATCCATGGGGCGGGCCGCTGGAGATCAACACGGCGGACTCGGCCACCGACGACGACCGCAGCCGGAACCTGCAGGACCTCGACCGGGCGGCGCTGTCGTCGCGGCCGCTCGACGAGACGCAGCAGAGCTGGCTGCTGGGCCCCACCGGGGAGCAGAAGAAGAAGAAGTACGTGGATCTGGGGTGCGTCATCGTCAGCCGCAAGATCTTTATCTGGACGGTGGGGACGCTCCTCGTCTCCGGCTTGCTGGCCGGGCTGATCGTCCTCATCGTCAAGACCGTGCCGCGTCACCACCACGCCAAGCCTCCTCCGGACAACTACACTCTCGCTCTCCACAAGGCCCTCATGTTCTTCAACGCTCAGAAATCTGGTAAGCTTCCGAAGCACAATAACGTTTCGTGGAGGGGGAACTCGTGCGTGAACGATGGTGAACCCAACACCATGTTCAAGGATCTGTCGGGTGGCTACTATGATGCTGGAGATGCCATCAAGTTCAACTTCCCTCAGTCATTCGCCATGACTCTGCTGAGCTGGAGCGTGATCGAGTACAGTGCCAAGTACGAAGCCGCTGGGGAACTTGCGCATGCAAAGGAGCTCATCAAATGGGGCGCTGATTACTTCCTCAAGACCTTCAACCATACCGCTGATACAATCGACACCATGGTTTCGCAGGTTGGGTCAGGAGATACTGCTAAAGGGAGTACTACTCCTAATGATCACTATTGCTGGACTCGACCCGAAGACATTGATTATAAACGCCCTGTGTTTCAGACCAGTAGTTGCGCTGATCTTGCATCTGAGATGGCTGCAGCTTTGGCTGCCGCATCCATAGTGTTTAAGGACAACAAGGCCTACTCGCAGAAACTTGTGCACGGCGCCACAACGCTCTTCACGTTCGGAAGGAGTCGAGGAAGAGGCCTCTACAGTGCTCCTGGTTCAGAGGCTTCCGTCTTTTACAATTCTACGTTGTACTGGGATGAATACGTGTGGGGTGCAGCTTGGATGTATTATGCCACTGGGAATAACTCTTATCTTACTCTCGCAACACATCCTACTCTTGCCAAGCATGCTGGTGCCTTCTGGGGCGGCCCTGATTATGGAGTATTCAGTTGGGACAACAAACTTGCTGGTGCACAGGTGCTTCTGACCCGTTTGAGGTTATTCTTGAGCCCTGGTTACCCATATGAAGAAATCTTGAGGACATTTCAGAATCAGACTAGCATAGTCATGTGCTCGTACCTGCCAATATTCACATCCTTTAATAGAACCAAAGGTGGCTTGATCCAGTTGAATCATGGAAGGCCTCAACCACTTCAATACGTGGTGAATGCAGCCTTCTTAGCAACCTTGTTCAGTGATTATCTTGATGCTGCCGATACTCCTGGATGGTATTGTGGACCCAACTTCTATTCCACTGATGTCTTGCGTAATTTTGCTAAGTTTCAGGTTGATTACATTCTTGGCAAGAATCCCCGGAAAATGAGCTATGTTACAGGTTTTGGCAATCATTACCCAAAACAAGTGCACCATAGAGGTGCATCGATTCCCAAGAATAAGATCAAATACAATTGCAAAGGGGGTTGGAAATGGAGGGACTCAAAAAAGCCAAACCCAAATATTATTGAAGGTGCCATGGTGGCTGGGCCTGACAAAAAAGATGGTTTCCATGATGTTCGTACTAATTACAATTACACAGAGCCAACTCTTGCTGGAAATGCAGGTTTGGTATTTGCGCTTGTTGGTTTGTCTGGAGACAAGTCTGTTGGTATTGATAAAAATACCATTTTCTCTGCGGTTCCCCCAATAGACATGGCAGAAGAAGAACTCAGCAGCTCTTTAGAGTTTACTCCAACGTGGGTGGTAGCAGGTGTTTGCTTTGTCATTGTTCTGTTATCTCTTTTTGCCGAGCGTGGTCTTCATAAACTTGGAAAGTACTTGCTGCATGAGAAACAAGATGCACTATATGAAGCCTTACAAAAACTAAAAGAAGAATTGATGCTTTTAGGGTTCATTTCCCTTCTGCTAACTGTAACTCAACGTTCCATAAGCCGCATATGCATCCCTGCCCATGTCGCAACTCACATGTTACCATGTAAAAGGGAAACTGCTGAGCACAAAACCCCTGCACATTACTTTCTTAATCACTCTACAAACAATGGTCGACGCCTTCTGTCTTCAGAAACAACTTCAGATCACTGTCAGCTCAAGGGGAAGGTTCCATTGTTATCATTGGAAGGATTACATCATCTACACATCTTCATCTTTGTATTAGCAGTTGTTCATGTGATCTTCTGTGTCTCAACCATGGTTCTTGGAGGGGCAAGAGTACGACAATGGAAGCGCTGGGAGGAATCCATCCAGAAGGATCGACGAAGCGGTAAAAGTACTGCTCAAGTTGGGCATCACCATCGTGCGTTCTTGAAAGAACGTGCAGATGGATATTGGAGAAGAGCAGCTATTATAGGTTGGATGATAGCATTCTTCAAACAATTTTATGGCTCTATCACTAAGTCAGACTACATTGCACTGCGGCAAGGGTTTATCAAGGAGCACTGCCCTGGAAATCCTGATTTTGATTTTCACAAATACATGATGCGGACACTTGAAGTTGATTTTAGAAAGATTGTTGGGATCAGCTGGTACCTGTGGCTCTTTGTTGTGCTGTTTTTGTTGCTGAATGTGGACGGATGGAACACATACTTTTGGTTAGCATTTTTACCGCTGATTCTTCTGCTTCTAGTGGGGGCCAAATTGGAACACATAATTAGCCGTTTGGCTCAGGATGTTGAACAAACAGGAGTACGTGCTAATGAAGGAGCTACAAGAGTGAGGCCTTCAGATGAACACTTCTGGTTTAACAAACCTAGGATTGTTCTCAATTTGATCCACTTCATTCTGTTTCAAAATTCATTCGAGATTGCTTTCTTCTTCTGGATTTGGAGCACGTATGGAATTCACTCATGCATCATGGAAAAGTTGGGCTACATCATCGCAAGACTTATTATGGGTGTGATAGTTCAAGTGCTTTGCAGTTACAGCACCCTACCATTGTATGTTATCGTCACCCAGATGGGTAGCAAGTTCAAGGAGGGAATGTTCGATGAAACGATACATGGTGCCATCGATATATGGGCTGAAGGTGCAATGAGTAAAAGTGACGATAGCAAGCGATCCTCCTCACGTAGTATGCACAAAATGATCAACAATGAAGCCTCCACAACTGTCGATGTTGCAGAACAAGAAATGGTTGTCATGGAAAGAACTATAAATGTGCTCCCTTGTCAAGTCCAGCCACCTTCTTCATCCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008152 GO:0008810 GO:0009058 GO:0009059 GO:0009250 GO:0009504 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_9 Mlo

Protein Analysis

1107

Amino Acids

124.74

Weight (kDa)

8.85

Isoelectric Point (pI)

32.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_9	PF00759	111 - 583	5e-140	Glycosyl hydrolase family 9
Mlo	PF03094	615 - 1075	5.7e-181	Mlo family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24260 AT4G24260 AT4G24260 AT5G49720
fragaria_vesca	FvH4_5g27130 FvH4_5g27130 FvH4_5g27130 FvH4_5g27130
malus_domestica	MD04G1170800.v1.1 MD08G1250900.v1.1 MD15G1445800.v1.1
prunus_persica	Prupe.1G587900_v2.0.a1 Prupe.3G082700_v2.0.a1
pyrus_communis	pycom04g15140 pycom08g21760 pycom15g39260 pycom15g39270
rosa_chinensis	RchiOBHm_Chr7g0218131
rosa_laevigata	RLG00000002397 RLG00000003204 RLG00000029460
rosa_multiflora	Rmu_sc0000054.1_g000022 Rmu_sc0003627.1_g000012 Rmu_sc0031732.1_g000002
rosa_roxburghii	Rroxscaffold_3G00233940 Rroxscaffold_3G00241280
rosa_rugosa	Rorug01G0072800 Rorug02G0384500 Rorug04G0442400 Rorug07G0174400
rosa_samantha	Rh4CG311700 Rh4DG293000 Rh6BG152200 Rh6DG136400 Rh7AG316800 Rh7BG307900 Rh7BG308000 Rh7CG333700 Rh7DG315700
rosa_wichuraiana	Rw7G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	765
AarI	CACCTGC	1 cut(s)	1868
Acc16I	TGCGCA	1 cut(s)	594
Acc36I	ACCTGC	5 cut(s)	90, 673, 1260, 1721, 1868
Acc65I	GGTACC	1 cut(s)	2652
AccB1I	GGYRCC	5 cut(s)	887, 1085, 1640, 2652, 3128
AccBSI	CCGCTC	1 cut(s)	121
AccI	GTMKAC	1 cut(s)	2173
AccII	CGCG	2 cut(s)	115, 298
AccIII	TCCGGA	1 cut(s)	322
AclI	AACGTT	2 cut(s)	405, 2050
AclWI	GGATC	9 cut(s)	8, 21, 195, 471, 1288, 2385, 2651, 2890, 3177
AcoI	YGGCCR	3 cut(s)	54, 116, 261
AcsI	RAATTY	2 cut(s)	2917, 2964
AcuI	CTGAAG	4 cut(s)	2172, 2184, 2832, 3168
AcyI	GRCGYC	2 cut(s)	888, 2176
AfeI	AGCGCT	1 cut(s)	2354
AfiI	CCNNNNNNNGG	5 cut(s)	23, 97, 160, 1109, 1167
AflIII	ACRYGT	2 cut(s)	996, 2094
AjnI	CCWGG	4 cut(s)	943, 1183, 1393, 2569
AjuI	GAANNNNNNNTTGG	2 cut(s)	440, 472
AleI	CACNNNNGTG	1 cut(s)	2421
AloI	GAACNNNNNNTCC	2 cut(s)	3092, 3124
Alw26I	GTCTC	4 cut(s)	122, 253, 1758, 2314
Alw44I	GTGCAC	3 cut(s)	881, 1143, 1535
AlwI	GGATC	9 cut(s)	8, 21, 195, 471, 1288, 2385, 2651, 2890, 3177
Aor13HI	TCCGGA	1 cut(s)	322
Aor51HI	AGCGCT	1 cut(s)	2354
ApaI	GGGCCC	1 cut(s)	155
ApaLI	GTGCAC	3 cut(s)	881, 1143, 1535
ApoI	RAATTY	2 cut(s)	2917, 2964
Asp718I	GGTACC	1 cut(s)	2652
AspA2I	CCTAGG	1 cut(s)	2876
AspLEI	GCGC	7 cut(s)	106, 595, 623, 797, 890, 1747, 2355
AspS9I	GGNCC	9 cut(s)	26, 88, 151, 152, 352, 1100, 1409, 1655, 2757
AsuC2I	CCSGG	4 cut(s)	98, 160, 265, 1486
AsuHPI	GGTGA	5 cut(s)	293, 452, 1348, 2408, 3067
AvaII	GGWCC	2 cut(s)	88, 1409
AvrII	CCTAGG	1 cut(s)	2876
BaeGI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BamHI	GGATCC	1 cut(s)	13
BanI	GGYRCC	5 cut(s)	887, 1085, 1640, 2652, 3128
BanII	GRGCYC	3 cut(s)	155, 609, 1184
BarI	GAAGNNNNNNTAC	2 cut(s)	164, 196
BauI	CACGAG	1 cut(s)	424
BbsI	GAAGAC	3 cut(s)	759, 1919, 2178
BceAI	ACGGC	4 cut(s)	22, 60, 901, 2766
BcgI	CGANNNNNNTGC	4 cut(s)	545, 579, 2402, 2436
BciT130I	CCWGG	4 cut(s)	945, 1185, 1395, 2571
BclI	TGATCA	2 cut(s)	727, 3210
BcnI	CCSGG	4 cut(s)	98, 160, 265, 1486
BcoDI	GTCTC	4 cut(s)	122, 253, 1758, 2314
BfaI	CTAG	3 cut(s)	1230, 2750, 2877
BfmI	CTRYAG	3 cut(s)	83, 819, 934
BfoI	RGCGCY	4 cut(s)	107, 624, 891, 2356
BfuAI	ACCTGC	5 cut(s)	90, 673, 1260, 1721, 1868
BglI	GCCNNNNNGGC	1 cut(s)	1649
BglII	AGATCT	1 cut(s)	216
BlnI	CCTAGG	1 cut(s)	2876
BlpI	GCTNAGC	2 cut(s)	539, 2121
BmcAI	AGTACT	3 cut(s)	715, 1946, 2398
Bme1390I	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 2571
Bme18I	GGWCC	2 cut(s)	88, 1409
BmgT120I	GGNCC	9 cut(s)	26, 88, 151, 152, 352, 1100, 1409, 1655, 2757
BmrFI	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 2571
BmrI	ACTGGG	2 cut(s)	994, 1038
BmuI	ACTGGG	2 cut(s)	994, 1038
BpiI	GAAGAC	3 cut(s)	759, 1919, 2178
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
BpmI	CTGGAG	4 cut(s)	53, 510, 565, 1782
Bpu10I	CCTNAGC	1 cut(s)	2790
Bpu1102I	GCTNAGC	2 cut(s)	539, 2121
BpuEI	CTTGAG	5 cut(s)	620, 1198, 1228, 2201, 2388
BpuMI	CCSGG	4 cut(s)	98, 160, 265, 1486
Bsa29I	ATCGAT	2 cut(s)	1553, 3135
BsaAI	YACGTR	6 cut(s)	184, 997, 1333, 2816, 2958, 3194
BsaBI	GATNNNNATC	1 cut(s)	221
BsaHI	GRCGYC	2 cut(s)	888, 2176
BsaJI	CCNNGG	9 cut(s)	17, 159, 672, 1183, 1484, 1644, 2316, 2569, 2876
BsaWI	WCCGGW	1 cut(s)	322
BsaXI	ACNNNNNCTCC	2 cut(s)	3092, 3122
Bsc4I	CCNNNNNNNGG	5 cut(s)	23, 97, 160, 1109, 1167
Bse1I	ACTGG	4 cut(s)	786, 989, 1033, 1297
Bse3DI	GCAATG	2 cut(s)	2532, 3162
Bse8I	GATNNNNATC	1 cut(s)	221
BseAI	TCCGGA	1 cut(s)	322
BseBI	CCWGG	4 cut(s)	945, 1185, 1395, 2571
BseCI	ATCGAT	2 cut(s)	1553, 3135
BseDI	CCNNGG	9 cut(s)	17, 159, 672, 1183, 1484, 1644, 2316, 2569, 2876
BseJI	GATNNNNATC	1 cut(s)	221
BseLI	CCNNNNNNNGG	5 cut(s)	23, 97, 160, 1109, 1167
BseMI	GCAATG	2 cut(s)	2532, 3162
BseMII	CTCAG	7 cut(s)	386, 530, 530, 801, 1852, 2112, 2804
BseNI	ACTGG	4 cut(s)	786, 989, 1033, 1297
BseRI	GAGGAG	3 cut(s)	233, 309, 3178
BseSI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BseX3I	CGGCCG	1 cut(s)	116
BseYI	CCCAGC	4 cut(s)	148, 581, 1652, 2355
BsgI	GTGCAG	3 cut(s)	1026, 2121, 2463
Bsh1236I	CGCG	2 cut(s)	115, 298
Bsh1285I	CGRYCG	3 cut(s)	70, 97, 119
BshNI	GGYRCC	5 cut(s)	887, 1085, 1640, 2652, 3128
BshVI	ATCGAT	2 cut(s)	1553, 3135
BsiEI	CGRYCG	3 cut(s)	70, 97, 119
BsiSI	CCGG	7 cut(s)	76, 97, 159, 252, 264, 323, 1486
BslFI	GGGAC	3 cut(s)	250, 1139, 1619
BslI	CCNNNNNNNGG	5 cut(s)	23, 97, 160, 1109, 1167
BsmAI	GTCTC	4 cut(s)	122, 253, 1758, 2314
BsmBI	CGTCTC	2 cut(s)	122, 253
BsmFI	GGGAC	3 cut(s)	250, 1139, 1619
BsmI	GAATGC	2 cut(s)	1345, 2489
Bsp120I	GGGCCC	1 cut(s)	151
Bsp13I	TCCGGA	1 cut(s)	322
Bsp1720I	GCTNAGC	2 cut(s)	539, 2121
Bsp19I	CCATGG	4 cut(s)	17, 672, 1644, 2316
BspCNI	CTCAG	7 cut(s)	385, 529, 531, 802, 1851, 2113, 2803
BspDI	ATCGAT	2 cut(s)	1553, 3135
BspEI	TCCGGA	1 cut(s)	322
BspFNI	CGCG	2 cut(s)	115, 298
BspMAI	CTGCAG	2 cut(s)	87, 823
BspMI	ACCTGC	5 cut(s)	90, 673, 1260, 1721, 1868
BspPI	GGATC	9 cut(s)	8, 21, 195, 471, 1288, 2385, 2651, 2890, 3177
BspQI	GCTCTTC	2 cut(s)	905, 2455
BspT107I	GGYRCC	5 cut(s)	887, 1085, 1640, 2652, 3128
BsrBI	CCGCTC	1 cut(s)	121
BsrDI	GCAATG	2 cut(s)	2532, 3162
BsrI	ACTGG	4 cut(s)	786, 989, 1033, 1297
BssECI	CCNNGG	9 cut(s)	17, 159, 672, 1183, 1484, 1644, 2316, 2569, 2876
BssNI	GRCGYC	2 cut(s)	888, 2176
BssSI	CACGAG	1 cut(s)	424
BssT1I	CCWWGG	5 cut(s)	17, 672, 1644, 2316, 2876
Bst2BI	CACGAG	1 cut(s)	424
Bst2UI	CCWGG	4 cut(s)	945, 1185, 1395, 2571
Bst4CI	ACNGT	7 cut(s)	232, 292, 563, 938, 2041, 2210, 3235
Bst6I	CTCTTC	3 cut(s)	905, 919, 2455
BstACI	GRCGYC	2 cut(s)	888, 2176
BstBAI	YACGTR	6 cut(s)	184, 997, 1333, 2816, 2958, 3194
BstC8I	GCNNGC	7 cut(s)	26, 143, 257, 261, 597, 1080, 3179
BstDSI	CCRYGG	4 cut(s)	17, 672, 1644, 2316
BstEII	GGTNACC	1 cut(s)	1187
BstFNI	CGCG	2 cut(s)	115, 298
BstH2I	RGCGCY	4 cut(s)	107, 624, 891, 2356
BstHHI	GCGC	7 cut(s)	106, 595, 623, 797, 890, 1747, 2355
BstMAI	GTCTC	4 cut(s)	122, 253, 1758, 2314
BstMCI	CGRYCG	3 cut(s)	70, 97, 119
BstNI	CCWGG	4 cut(s)	945, 1185, 1395, 2571
BstNSI	RCATGY	3 cut(s)	599, 1082, 2098
BstPI	GGTNACC	1 cut(s)	1187
BstSCI	CCNGG	8 cut(s)	96, 158, 263, 943, 1183, 1393, 1484, 2569
BstSFI	CTRYAG	3 cut(s)	83, 819, 934
BstSLI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BstUI	CGCG	2 cut(s)	115, 298
BstV2I	GAAGAC	3 cut(s)	759, 1919, 2178
BstX2I	RGATCY	4 cut(s)	13, 187, 216, 463
BstYI	RGATCY	4 cut(s)	13, 187, 216, 463
BstZI	CGGCCG	1 cut(s)	116
Bsu15I	ATCGAT	2 cut(s)	1553, 3135
BsuTUI	ATCGAT	2 cut(s)	1553, 3135
BtgI	CCRYGG	4 cut(s)	17, 672, 1644, 2316
BtgZI	GCGATG	1 cut(s)	2986
BtsI	GCAGTG	2 cut(s)	2537, 2563
BtsIMutI	CAGTG	8 cut(s)	568, 943, 1026, 1372, 1425, 2206, 2537, 2563
BveI	ACCTGC	5 cut(s)	90, 673, 1260, 1721, 1868
Cac8I	GCNNGC	7 cut(s)	26, 143, 257, 261, 597, 1080, 3179
CciNI	GCGGCCGC	1 cut(s)	116
CfoI	GCGC	7 cut(s)	106, 595, 623, 797, 890, 1747, 2355
Cfr13I	GGNCC	9 cut(s)	26, 88, 151, 152, 352, 1100, 1409, 1655, 2757
ClaI	ATCGAT	2 cut(s)	1553, 3135
CseI	GACGC	5 cut(s)	139, 187, 247, 287, 2184
CspCI	CAANNNNNGTGG	2 cut(s)	1851, 1886
DinI	GGCGCC	1 cut(s)	889
EaeI	YGGCCR	3 cut(s)	54, 116, 261
EagI	CGGCCG	1 cut(s)	116
Eam1104I	CTCTTC	3 cut(s)	905, 919, 2455
EarI	CTCTTC	3 cut(s)	905, 919, 2455
EciI	GGCGGA	1 cut(s)	62
Ecl136II	GAGCTC	1 cut(s)	607
EclXI	CGGCCG	1 cut(s)	116
Eco130I	CCWWGG	5 cut(s)	17, 672, 1644, 2316, 2876
Eco147I	AGGCCT	4 cut(s)	863, 930, 1315, 2845
Eco24I	GRGCYC	3 cut(s)	155, 609, 1184
Eco47I	GGWCC	2 cut(s)	88, 1409
Eco47III	AGCGCT	1 cut(s)	2354
Eco52I	CGGCCG	1 cut(s)	116
Eco53kI	GAGCTC	1 cut(s)	607
Eco57I	CTGAAG	4 cut(s)	2172, 2184, 2832, 3168
Eco91I	GGTNACC	1 cut(s)	1187
EcoICRI	GAGCTC	1 cut(s)	607
EcoO109I	RGGNCCY	3 cut(s)	88, 152, 352
EcoO65I	GGTNACC	1 cut(s)	1187
EcoRI	GAATTC	1 cut(s)	2964
EcoRII	CCWGG	4 cut(s)	943, 1183, 1393, 2569
EcoT14I	CCWWGG	5 cut(s)	17, 672, 1644, 2316, 2876
EcoT22I	ATGCAT	2 cut(s)	2072, 2978
EcoT38I	GRGCYC	3 cut(s)	155, 609, 1184
EgeI	GGCGCC	1 cut(s)	889
EheI	GGCGCC	1 cut(s)	889
ErhI	CCWWGG	5 cut(s)	17, 672, 1644, 2316, 2876
Esp3I	CGTCTC	2 cut(s)	122, 253
FalI	AAGNNNNNCTT	2 cut(s)	494, 526
FaqI	GGGAC	3 cut(s)	250, 1139, 1619
FauI	CCCGC	1 cut(s)	17
FauNDI	CATATG	2 cut(s)	1195, 2066
FbaI	TGATCA	2 cut(s)	727, 3210
FblI	GTMKAC	1 cut(s)	2173
FriOI	GRGCYC	3 cut(s)	155, 609, 1184
FspBI	CTAG	3 cut(s)	1230, 2750, 2877
FspI	TGCGCA	1 cut(s)	594
GlaI	GCGC	7 cut(s)	105, 594, 622, 796, 889, 1746, 2354
GsaI	CCCAGC	4 cut(s)	152, 585, 1656, 2359
GsuI	CTGGAG	4 cut(s)	53, 510, 565, 1782
HaeII	RGCGCY	4 cut(s)	107, 624, 891, 2356
HapII	CCGG	7 cut(s)	76, 97, 159, 252, 264, 323, 1486
HgaI	GACGC	5 cut(s)	139, 187, 247, 287, 2184
HhaI	GCGC	7 cut(s)	106, 595, 623, 797, 890, 1747, 2355
Hin1I	GRCGYC	2 cut(s)	888, 2176
Hin6I	GCGC	7 cut(s)	104, 593, 621, 795, 888, 1745, 2353
HinP1I	GCGC	7 cut(s)	104, 593, 621, 795, 888, 1745, 2353
HincII	GTYRAC	1 cut(s)	2174
HindII	GTYRAC	1 cut(s)	2174
HindIII	AAGCTT	1 cut(s)	386
HpaII	CCGG	7 cut(s)	76, 97, 159, 252, 264, 323, 1486
HphI	GGTGA	5 cut(s)	293, 452, 1348, 2408, 3067
Hpy166II	GTNNAC	9 cut(s)	433, 443, 883, 1145, 1409, 1537, 1857, 2174, 2695
Hpy8I	GTNNAC	9 cut(s)	433, 443, 883, 1145, 1409, 1537, 1857, 2174, 2695
Hpy99I	CGWCG	6 cut(s)	65, 68, 115, 128, 2178, 2385
HpyCH4III	ACNGT	7 cut(s)	232, 292, 563, 938, 2041, 2210, 3235
Hsp92I	GRCGYC	2 cut(s)	888, 2176
HspAI	GCGC	7 cut(s)	104, 593, 621, 795, 888, 1745, 2353
KasI	GGCGCC	1 cut(s)	887
Kpn2I	TCCGGA	1 cut(s)	322
KpnI	GGTACC	1 cut(s)	2656
Ksp22I	TGATCA	2 cut(s)	727, 3210
LguI	GCTCTTC	2 cut(s)	905, 2455
LmnI	GCTCC	9 cut(s)	163, 246, 546, 604, 946, 2560, 2828, 2952, 3291
MaeI	CTAG	3 cut(s)	1230, 2750, 2877
MaeIII	GTNAC	8 cut(s)	299, 1187, 1501, 2041, 2097, 3044, 3073, 3167
MbiI	CCGCTC	1 cut(s)	121
MfeI	CAATTG	1 cut(s)	1579
MflI	RGATCY	4 cut(s)	13, 187, 216, 463
Mly113I	GGCGCC	1 cut(s)	888
MlyI	GAGTC	5 cut(s)	44, 526, 736, 925, 1601
MmeI	TCCRAC	3 cut(s)	1574, 1886, 2459
Mph1103I	ATGCAT	2 cut(s)	2072, 2978
MroI	TCCGGA	1 cut(s)	322
MseI	TTAA	4 cut(s)	849, 1272, 2151, 2868
MslI	CAYNNNNRTG	5 cut(s)	1083, 1238, 1545, 2421, 3080
MspA1I	CMGCKG	5 cut(s)	31, 581, 656, 2649, 2734
MspI	CCGG	7 cut(s)	76, 97, 159, 252, 264, 323, 1486
MspR9I	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 2571
MunI	CAATTG	1 cut(s)	1579
Mva1269I	GAATGC	2 cut(s)	1345, 2489
MvaI	CCWGG	4 cut(s)	945, 1185, 1395, 2571
MvnI	CGCG	2 cut(s)	115, 298
NarI	GGCGCC	1 cut(s)	888
NciI	CCSGG	4 cut(s)	98, 160, 265, 1486
NcoI	CCATGG	4 cut(s)	17, 672, 1644, 2316
NdeI	CATATG	2 cut(s)	1195, 2066
NmeAIII	GCCGAG	2 cut(s)	32, 1942
NmuCI	GTSAC	3 cut(s)	299, 3073, 3167
NotI	GCGGCCGC	1 cut(s)	116
NsbI	TGCGCA	1 cut(s)	594
NsiI	ATGCAT	2 cut(s)	2072, 2978
NspI	RCATGY	3 cut(s)	599, 1082, 2098
OliI	CACNNNNGTG	1 cut(s)	2421
PaeI	GCATGC	2 cut(s)	599, 1082
PaqCI	CACCTGC	1 cut(s)	1868
PceI	AGGCCT	4 cut(s)	863, 930, 1315, 2845
PciI	ACATGT	1 cut(s)	2094
PciSI	GCTCTTC	2 cut(s)	905, 2455
PcsI	WCGNNNNNNNCGW	3 cut(s)	279, 288, 902
PctI	GAATGC	2 cut(s)	1345, 2489
PfeI	GAWTC	6 cut(s)	1222, 1303, 1480, 1555, 2363, 2737
PfoI	TCCNGGA	1 cut(s)	1393
PleI	GAGTC	5 cut(s)	44, 526, 736, 924, 1601
PluTI	GGCGCC	1 cut(s)	891
PpsI	GAGTC	5 cut(s)	44, 526, 736, 924, 1601
Ppu21I	YACGTR	6 cut(s)	184, 997, 1333, 2816, 2958, 3194
PpuMI	RGGWCCY	1 cut(s)	88
PscI	ACATGT	1 cut(s)	2094
PsiI	TTATAA	1 cut(s)	765
Psp124BI	GAGCTC	1 cut(s)	609
Psp1406I	AACGTT	2 cut(s)	405, 2050
Psp5II	RGGWCCY	1 cut(s)	88
Psp6I	CCWGG	4 cut(s)	943, 1183, 1393, 2569
PspEI	GGTNACC	1 cut(s)	1187
PspFI	CCCAGC	4 cut(s)	148, 581, 1652, 2355
PspGI	CCWGG	4 cut(s)	943, 1183, 1393, 2569
PspOMI	GGGCCC	1 cut(s)	151
PspPI	GGNCC	9 cut(s)	26, 88, 151, 152, 352, 1100, 1409, 1655, 2757
PspPPI	RGGWCCY	1 cut(s)	88
PstI	CTGCAG	2 cut(s)	87, 823
PsuI	RGATCY	4 cut(s)	13, 187, 216, 463
PvuII	CAGCTG	1 cut(s)	2649
RseI	CAYNNNNRTG	5 cut(s)	1083, 1238, 1545, 2421, 3080
SacI	GAGCTC	1 cut(s)	609
SalI	GTCGAC	1 cut(s)	2172
SapI	GCTCTTC	2 cut(s)	905, 2455
SaqAI	TTAA	4 cut(s)	849, 1272, 2151, 2868
Sau96I	GGNCC	9 cut(s)	26, 88, 151, 152, 352, 1100, 1409, 1655, 2757
SbfI	CCTGCAGG	1 cut(s)	87
ScaI	AGTACT	3 cut(s)	715, 1946, 2398
SchI	GAGTC	5 cut(s)	44, 526, 736, 925, 1601
ScrFI	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 2571
SdaI	CCTGCAGG	1 cut(s)	87
SfcI	CTRYAG	3 cut(s)	83, 819, 934
SfoI	GGCGCC	1 cut(s)	889
SinI	GGWCC	2 cut(s)	88, 1409
SmiMI	CAYNNNNRTG	5 cut(s)	1083, 1238, 1545, 2421, 3080
SmlI	CTYRAG	5 cut(s)	635, 1177, 1207, 2216, 2403
SmoI	CTYRAG	5 cut(s)	635, 1177, 1207, 2216, 2403
SphI	GCATGC	2 cut(s)	599, 1082
Sse8387I	CCTGCAGG	1 cut(s)	87
SseBI	AGGCCT	4 cut(s)	863, 930, 1315, 2845
SspDI	GGCGCC	1 cut(s)	887
SspI	AATATT	2 cut(s)	1260, 1630
SspMI	CTAG	3 cut(s)	1230, 2750, 2877
SstI	GAGCTC	1 cut(s)	609
StuI	AGGCCT	4 cut(s)	863, 930, 1315, 2845
StyD4I	CCNGG	8 cut(s)	96, 158, 263, 943, 1183, 1393, 1484, 2569
StyI	CCWWGG	5 cut(s)	17, 672, 1644, 2316, 2876
TaaI	ACNGT	7 cut(s)	232, 292, 563, 938, 2041, 2210, 3235
TatI	WGTACW	5 cut(s)	558, 713, 981, 1944, 2396
TfiI	GAWTC	6 cut(s)	1222, 1303, 1480, 1555, 2363, 2737
Tru1I	TTAA	4 cut(s)	849, 1272, 2151, 2868
Tru9I	TTAA	4 cut(s)	849, 1272, 2151, 2868
TscAI	CASTG	8 cut(s)	568, 943, 1033, 1372, 1432, 2213, 2544, 2570
TseFI	GTSAC	3 cut(s)	299, 3073, 3167
Tsp45I	GTSAC	3 cut(s)	299, 3073, 3167
TspGWI	ACGGA	2 cut(s)	949, 2712
TspRI	CASTG	8 cut(s)	568, 943, 1033, 1372, 1432, 2213, 2544, 2570
VneI	GTGCAC	3 cut(s)	881, 1143, 1535
VpaK11BI	GGWCC	2 cut(s)	88, 1409
XapI	RAATTY	2 cut(s)	2917, 2964
XceI	RCATGY	3 cut(s)	599, 1082, 2098
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XmaJI	CCTAGG	1 cut(s)	2876
XmiI	GTMKAC	1 cut(s)	2173
XspI	CTAG	3 cut(s)	1230, 2750, 2877
ZrmI	AGTACT	3 cut(s)	715, 1946, 2398
Zsp2I	ATGCAT	2 cut(s)	2072, 2978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.