Rh7BG307900

Endoglucanase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
29569369 .. 29571191
1823 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG307900.1

Sequence Viewer

Length: 1188 bp
ATGGTTTCGCAGGTTGGGTCAGGAGATACTGCTAAAGGAAGTACTACTCCTAATGATCACTATTGCTGGACTCGACCCGAAGACATTGATTATAAACGCCCTGTGTTTCAGACCAGTAGTTGCGCTGATCTTGCATCTGAGATGGCTGCAGCTTTGGCTGCTGCATCCATAGTGTTTAAGGACAACAAGGCCTACTCGCAGAAACTTGTGCACGGTGCCAAAACGCTCTTCACGTTCGGAAGGGAACGAGGAAGAGGCCTCTACAGTGCTCCTGGTTCAGAGGCTTCCGTCTTTTACAATTCTACGTTGTACTGGGATGAATACGTGTGGGGTGCAGCTTGGATGTATTATGCCACTGGGAATAACTCTTATCTTACTCTCGCAACACATCCTACTCTTGCCAAGCATGCTGGTGCCTTCTGGGGTGGCCCTGATTATGGAGTATTCAGCTGGGACAACAAACTTGCTGGTGCACAGGTGCTTCTGACCCGTTTGAGGTTATTCTTGAGCCCTGGTTACCCATATGAAGAAATCTTGAGGACATATCAGAATCAGACTAGCATAGTCATGTGCTCATACCTGCCAATATTCACATCCTTTAATAGAACCAAAGGTGGCTTGATCCAGTTGAATCATGGAAGGCCTCAACCACTTCAATATGTGGTGAATGCAGCCTTCTTAGCAACCTTGTTCAGTGATTATCTTGATGCTGCCGATACTCCTGGATGGTATTGTGGACCCAACTTCTATTCCACTGATGTCTTGCGTGATTTTGCTAAGTTTCAGGTTGATTACATTCTTGGCAAGAATCCCCGGAAAATGAGCTATGTTACAGGTTTTGGCAATCATTACCCAAAACAAGTGCACCATAGAGGTGCATCGATTCCCAAGAATAAGATCAAATACAATTGCAAAGGGGGTTGGAAATGGAGGGACTCGAAAAAGCCAAACCCAAATATTATTGAAGGTGCCATGGTGGCTGGCCCTGACAAAAAAGATGGTTTCCATGATGTTCGTTCTAATTACAATTACACAGAGCCAACTCTTGCTGGAAATGCAGGTTTGGTATTTGCGCTTGTTGGTTTGTCTGGAGACAAGTCTGTTGGTATTGATAAAAATACCATTTTCTCCGCGGTTCCCCCAATGTTTCCAACTCCACCACCTCCTCCGGCACCCTGGAAACCTTGA

Protein Analysis

395

Amino Acids

43.78

Weight (kDa)

9.14

Isoelectric Point (pI)

32.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 2 - 359 5.1e-97 Glycosyl hydrolase family 9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 93
Acc36I ACCTGC 2 cut(s) 588, 1049
AccB1I GGYRCC 4 cut(s) 215, 413, 968, 1171
AccII CGCG 1 cut(s) 1133
AciI CCGC 2 cut(s) 1131, 1133
AclWI GGATC 1 cut(s) 616
AfaI GTAC 2 cut(s) 43, 311
AfiI CCNNNNNNNGG 2 cut(s) 437, 495
AflIII ACRYGT 1 cut(s) 324
AgsI TTSAA 3 cut(s) 631, 656, 965
AjnI CCWGG 4 cut(s) 271, 511, 721, 1175
AjuI GAANNNNNNNTTGG 2 cut(s) 212, 244
AluBI AGCT 4 cut(s) 152, 338, 450, 825
AluI AGCT 4 cut(s) 152, 338, 450, 825
Alw21I GWGCWC 5 cut(s) 213, 271, 475, 575, 867
Alw26I GTCTC 1 cut(s) 1086
Alw44I GTGCAC 3 cut(s) 209, 471, 863
AlwI GGATC 1 cut(s) 616
AoxI GGCC 5 cut(s) 189, 256, 427, 641, 982
ApaLI GTGCAC 3 cut(s) 209, 471, 863
ApeKI GCWGC 7 cut(s) 146, 149, 158, 161, 335, 671, 710
AspLEI GCGC 2 cut(s) 125, 1075
AspS9I GGNCC 3 cut(s) 428, 737, 983
AsuC2I CCSGG 1 cut(s) 814
AsuHPI GGTGA 1 cut(s) 676
AvaII GGWCC 1 cut(s) 737
BaeGI GKGCMC 3 cut(s) 213, 475, 867
BanI GGYRCC 4 cut(s) 215, 413, 968, 1171
BanII GRGCYC 1 cut(s) 512
BbsI GAAGAC 1 cut(s) 87
Bbv12I GWGCWC 5 cut(s) 213, 271, 475, 575, 867
BbvI GCAGC 7 cut(s) 133, 145, 148, 161, 347, 683, 697
BccI CCATC 3 cut(s) 136, 720, 992
BciT130I CCWGG 4 cut(s) 273, 513, 723, 1177
BclI TGATCA 1 cut(s) 55
BcnI CCSGG 1 cut(s) 814
BcoDI GTCTC 1 cut(s) 1086
BfaI CTAG 1 cut(s) 558
BfmI CTRYAG 2 cut(s) 147, 262
BfuAI ACCTGC 2 cut(s) 588, 1049
BglI GCCNNNNNGGC 1 cut(s) 977
BisI GCNGC 7 cut(s) 147, 150, 159, 162, 336, 672, 711
BlsI GCNGC 7 cut(s) 148, 151, 160, 163, 337, 673, 712
BmcAI AGTACT 1 cut(s) 43
Bme1390I CCNGG 5 cut(s) 273, 513, 723, 814, 1177
Bme18I GGWCC 1 cut(s) 737
BmgT120I GGNCC 3 cut(s) 428, 737, 983
BmiI GGNNCC 6 cut(s) 217, 415, 739, 970, 1137, 1173
BmrFI CCNGG 5 cut(s) 273, 513, 723, 814, 1177
BmrI ACTGGG 2 cut(s) 322, 366
BmsI GCATC 4 cut(s) 143, 173, 697, 887
BmuI ACTGGG 2 cut(s) 322, 366
BpiI GAAGAC 1 cut(s) 87
BpmI CTGGAG 1 cut(s) 1110
BpuEI CTTGAG 2 cut(s) 526, 556
BpuMI CCSGG 1 cut(s) 814
Bsa29I ATCGAT 1 cut(s) 881
BsaAI YACGTR 1 cut(s) 325
BsaJI CCNNGG 5 cut(s) 511, 812, 972, 1131, 1175
Bsc4I CCNNNNNNNGG 2 cut(s) 437, 495
Bse1I ACTGG 4 cut(s) 114, 317, 361, 625
BseBI CCWGG 4 cut(s) 273, 513, 723, 1177
BseCI ATCGAT 1 cut(s) 881
BseDI CCNNGG 5 cut(s) 511, 812, 972, 1131, 1175
BseGI GGATG 6 cut(s) 164, 322, 348, 388, 593, 731
BseLI CCNNNNNNNGG 2 cut(s) 437, 495
BseMII CTCAG 1 cut(s) 129
BseNI ACTGG 4 cut(s) 114, 317, 361, 625
BseRI GAGGAG 1 cut(s) 1155
BseSI GKGCMC 3 cut(s) 213, 475, 867
BseXI GCAGC 7 cut(s) 133, 145, 148, 161, 347, 683, 697
BseYI CCCAGC 1 cut(s) 450
BsgI GTGCAG 1 cut(s) 354
Bsh1236I CGCG 1 cut(s) 1133
BshFI GGCC 5 cut(s) 191, 258, 429, 643, 984
BshNI GGYRCC 4 cut(s) 215, 413, 968, 1171
BshVI ATCGAT 1 cut(s) 881
BsiHKAI GWGCWC 5 cut(s) 213, 271, 475, 575, 867
BsiSI CCGG 2 cut(s) 814, 1169
BslFI GGGAC 2 cut(s) 467, 947
BslI CCNNNNNNNGG 2 cut(s) 437, 495
BsmAI GTCTC 1 cut(s) 1086
BsmFI GGGAC 2 cut(s) 467, 947
BsmI GAATGC 1 cut(s) 673
BsnI GGCC 5 cut(s) 191, 258, 429, 643, 984
Bsp1286I GDGCHC 6 cut(s) 213, 271, 475, 512, 575, 867
Bsp143I GATC 4 cut(s) 55, 127, 621, 897
Bsp19I CCATGG 1 cut(s) 972
BspACI CCGC 2 cut(s) 1131, 1133
BspANI GGCC 5 cut(s) 191, 258, 429, 643, 984
BspCNI CTCAG 1 cut(s) 130
BspDI ATCGAT 1 cut(s) 881
BspFNI CGCG 1 cut(s) 1133
BspLI GGNNCC 6 cut(s) 217, 415, 739, 970, 1137, 1173
BspMAI CTGCAG 1 cut(s) 151
BspMI ACCTGC 2 cut(s) 588, 1049
BspPI GGATC 1 cut(s) 616
BspQI GCTCTTC 1 cut(s) 233
BspT107I GGYRCC 4 cut(s) 215, 413, 968, 1171
BsrI ACTGG 4 cut(s) 114, 317, 361, 625
BssECI CCNNGG 5 cut(s) 511, 812, 972, 1131, 1175
BssMI GATC 4 cut(s) 55, 127, 621, 897
BssT1I CCWWGG 1 cut(s) 972
Bst2UI CCWGG 4 cut(s) 273, 513, 723, 1177
Bst4CI ACNGT 2 cut(s) 215, 266
Bst6I CTCTTC 2 cut(s) 233, 247
BstBAI YACGTR 1 cut(s) 325
BstC8I GCNNGC 2 cut(s) 408, 982
BstDEI CTNAG 3 cut(s) 138, 679, 777
BstDSI CCRYGG 2 cut(s) 972, 1131
BstEII GGTNACC 1 cut(s) 515
BstF5I GGATG 6 cut(s) 164, 322, 348, 388, 593, 731
BstFNI CGCG 1 cut(s) 1133
BstHHI GCGC 2 cut(s) 125, 1075
BstKTI GATC 4 cut(s) 58, 130, 624, 900
BstMAI GTCTC 1 cut(s) 1086
BstMBI GATC 4 cut(s) 55, 127, 621, 897
BstMWI GCNNNNNNNGC 7 cut(s) 131, 155, 158, 407, 680, 977, 1055
BstNI CCWGG 4 cut(s) 273, 513, 723, 1177
BstNSI RCATGY 1 cut(s) 410
BstPI GGTNACC 1 cut(s) 515
BstSCI CCNGG 5 cut(s) 271, 511, 721, 812, 1175
BstSFI CTRYAG 2 cut(s) 147, 262
BstSLI GKGCMC 3 cut(s) 213, 475, 867
BstUI CGCG 1 cut(s) 1133
BstV1I GCAGC 7 cut(s) 133, 145, 148, 161, 347, 683, 697
BstV2I GAAGAC 1 cut(s) 87
Bsu15I ATCGAT 1 cut(s) 881
BsuRI GGCC 5 cut(s) 191, 258, 429, 643, 984
BsuTUI ATCGAT 1 cut(s) 881
BtgI CCRYGG 2 cut(s) 972, 1131
BtsCI GGATG 6 cut(s) 164, 322, 348, 388, 593, 731
BtsIMutI CAGTG 4 cut(s) 271, 354, 700, 753
BveI ACCTGC 2 cut(s) 588, 1049
Cac8I GCNNGC 2 cut(s) 408, 982
CfoI GCGC 2 cut(s) 125, 1075
Cfr13I GGNCC 3 cut(s) 428, 737, 983
Cfr42I CCGCGG 1 cut(s) 1134
ClaI ATCGAT 1 cut(s) 881
Csp6I GTAC 2 cut(s) 42, 310
CviAII CATG 5 cut(s) 407, 568, 635, 973, 1007
CviQI GTAC 2 cut(s) 42, 310
DdeI CTNAG 3 cut(s) 138, 679, 777
DpnI GATC 4 cut(s) 57, 129, 623, 899
DpnII GATC 4 cut(s) 55, 127, 621, 897
Eam1104I CTCTTC 2 cut(s) 233, 247
EarI CTCTTC 2 cut(s) 233, 247
Eco130I CCWWGG 1 cut(s) 972
Eco147I AGGCCT 3 cut(s) 191, 258, 643
Eco24I GRGCYC 1 cut(s) 512
Eco47I GGWCC 1 cut(s) 737
Eco91I GGTNACC 1 cut(s) 515
EcoO65I GGTNACC 1 cut(s) 515
EcoRII CCWGG 4 cut(s) 271, 511, 721, 1175
EcoT14I CCWWGG 1 cut(s) 972
EcoT38I GRGCYC 1 cut(s) 512
ErhI CCWWGG 1 cut(s) 972
FaeI CATG 5 cut(s) 410, 571, 638, 976, 1010
FaqI GGGAC 2 cut(s) 467, 947
FatI CATG 5 cut(s) 406, 567, 634, 972, 1006
FauNDI CATATG 1 cut(s) 523
FbaI TGATCA 1 cut(s) 55
Fnu4HI GCNGC 7 cut(s) 147, 150, 159, 162, 336, 672, 711
FokI GGATG 6 cut(s) 151, 329, 355, 375, 580, 738
FriOI GRGCYC 1 cut(s) 512
Fsp4HI GCNGC 7 cut(s) 147, 150, 159, 162, 336, 672, 711
FspBI CTAG 1 cut(s) 558
GlaI GCGC 2 cut(s) 124, 1074
GluI GCNGC 7 cut(s) 147, 150, 159, 162, 336, 672, 711
GsaI CCCAGC 1 cut(s) 454
GsuI CTGGAG 1 cut(s) 1110
HaeIII GGCC 5 cut(s) 191, 258, 429, 643, 984
HapII CCGG 2 cut(s) 814, 1169
HhaI GCGC 2 cut(s) 125, 1075
Hin1II CATG 5 cut(s) 410, 571, 638, 976, 1010
Hin6I GCGC 2 cut(s) 123, 1073
HinP1I GCGC 2 cut(s) 123, 1073
HinfI GANTC 6 cut(s) 70, 550, 631, 808, 883, 935
HpaII CCGG 2 cut(s) 814, 1169
HphI GGTGA 1 cut(s) 676
Hpy166II GTNNAC 4 cut(s) 211, 473, 737, 865
Hpy188I TCNGA 7 cut(s) 111, 139, 239, 280, 486, 549, 555
Hpy188III TCNNGA 5 cut(s) 21, 505, 535, 704, 1089
Hpy8I GTNNAC 4 cut(s) 211, 473, 737, 865
HpyAV CCTTC 5 cut(s) 234, 427, 633, 685, 959
HpyCH4III ACNGT 2 cut(s) 215, 266
HpyCH4IV ACGT 3 cut(s) 233, 305, 324
HpyF10VI GCNNNNNNNGC 7 cut(s) 131, 155, 158, 407, 680, 977, 1055
HpyF3I CTNAG 3 cut(s) 138, 679, 777
HpySE526I ACGT 3 cut(s) 233, 305, 324
Hsp92II CATG 5 cut(s) 410, 571, 638, 976, 1010
HspAI GCGC 2 cut(s) 123, 1073
Ksp22I TGATCA 1 cut(s) 55
KspI CCGCGG 1 cut(s) 1134
Kzo9I GATC 4 cut(s) 55, 127, 621, 897
LguI GCTCTTC 1 cut(s) 233
LmnI GCTCC 1 cut(s) 274
Lsp1109I GCAGC 7 cut(s) 133, 145, 148, 161, 347, 683, 697
LweI GCATC 4 cut(s) 143, 173, 697, 887
MaeI CTAG 1 cut(s) 558
MaeII ACGT 3 cut(s) 233, 305, 324
MaeIII GTNAC 2 cut(s) 515, 829
MalI GATC 4 cut(s) 57, 129, 623, 899
MboI GATC 4 cut(s) 55, 127, 621, 897
MboII GAAGA 4 cut(s) 92, 220, 264, 539
MfeI CAATTG 1 cut(s) 907
MhlI GDGCHC 6 cut(s) 213, 271, 475, 512, 575, 867
MluCI AATT 4 cut(s) 298, 907, 1021, 1027
MlyI GAGTC 2 cut(s) 64, 929
MmeI TCCRAC 2 cut(s) 902, 1175
MseI TTAA 2 cut(s) 177, 600
MslI CAYNNNNRTG 3 cut(s) 411, 566, 873
MspA1I CMGCKG 2 cut(s) 450, 1133
MspI CCGG 2 cut(s) 814, 1169
MspR9I CCNGG 5 cut(s) 273, 513, 723, 814, 1177
MunI CAATTG 1 cut(s) 907
Mva1269I GAATGC 1 cut(s) 673
MvaI CCWGG 4 cut(s) 273, 513, 723, 1177
MvnI CGCG 1 cut(s) 1133
MwoI GCNNNNNNNGC 7 cut(s) 131, 155, 158, 407, 680, 977, 1055
NciI CCSGG 1 cut(s) 814
NcoI CCATGG 1 cut(s) 972
NdeI CATATG 1 cut(s) 523
NdeII GATC 4 cut(s) 55, 127, 621, 897
NlaIII CATG 5 cut(s) 410, 571, 638, 976, 1010
NlaIV GGNNCC 6 cut(s) 217, 415, 739, 970, 1137, 1173
NspI RCATGY 1 cut(s) 410
PaeI GCATGC 1 cut(s) 410
PceI AGGCCT 3 cut(s) 191, 258, 643
PciSI GCTCTTC 1 cut(s) 233
PcsI WCGNNNNNNNCGW 1 cut(s) 230
PctI GAATGC 1 cut(s) 673
PfeI GAWTC 4 cut(s) 550, 631, 808, 883
PfoI TCCNGGA 1 cut(s) 721
PkrI GCNGC 7 cut(s) 148, 151, 160, 163, 337, 673, 712
PleI GAGTC 2 cut(s) 64, 929
PpsI GAGTC 2 cut(s) 64, 929
Ppu21I YACGTR 1 cut(s) 325
PsiI TTATAA 1 cut(s) 93
Psp6I CCWGG 4 cut(s) 271, 511, 721, 1175
PspEI GGTNACC 1 cut(s) 515
PspFI CCCAGC 1 cut(s) 450
PspGI CCWGG 4 cut(s) 271, 511, 721, 1175
PspN4I GGNNCC 6 cut(s) 217, 415, 739, 970, 1137, 1173
PspPI GGNCC 3 cut(s) 428, 737, 983
PstI CTGCAG 1 cut(s) 151
PvuII CAGCTG 1 cut(s) 450
RsaI GTAC 2 cut(s) 43, 311
RsaNI GTAC 2 cut(s) 42, 310
RseI CAYNNNNRTG 3 cut(s) 411, 566, 873
SacII CCGCGG 1 cut(s) 1134
SapI GCTCTTC 1 cut(s) 233
SaqAI TTAA 2 cut(s) 177, 600
SatI GCNGC 7 cut(s) 147, 150, 159, 162, 336, 672, 711
Sau3AI GATC 4 cut(s) 55, 127, 621, 897
Sau96I GGNCC 3 cut(s) 428, 737, 983
ScaI AGTACT 1 cut(s) 43
SchI GAGTC 2 cut(s) 64, 929
ScrFI CCNGG 5 cut(s) 273, 513, 723, 814, 1177
SduI GDGCHC 6 cut(s) 213, 271, 475, 512, 575, 867
SfaNI GCATC 4 cut(s) 143, 173, 697, 887
SfcI CTRYAG 2 cut(s) 147, 262
Sfr303I CCGCGG 1 cut(s) 1134
SgrBI CCGCGG 1 cut(s) 1134
SinI GGWCC 1 cut(s) 737
SmiMI CAYNNNNRTG 3 cut(s) 411, 566, 873
SmlI CTYRAG 2 cut(s) 505, 535
SmoI CTYRAG 2 cut(s) 505, 535
SphI GCATGC 1 cut(s) 410
Sse9I AATT 4 cut(s) 298, 907, 1021, 1027
SseBI AGGCCT 3 cut(s) 191, 258, 643
SsiI CCGC 2 cut(s) 1131, 1133
SspI AATATT 2 cut(s) 588, 958
SspMI CTAG 1 cut(s) 558
StuI AGGCCT 3 cut(s) 191, 258, 643
StyD4I CCNGG 5 cut(s) 271, 511, 721, 812, 1175
StyI CCWWGG 1 cut(s) 972
TaaI ACNGT 2 cut(s) 215, 266
TaiI ACGT 3 cut(s) 236, 308, 327
TaqI TCGA 3 cut(s) 73, 881, 938
TasI AATT 4 cut(s) 298, 907, 1021, 1027
TatI WGTACW 2 cut(s) 41, 309
TfiI GAWTC 4 cut(s) 550, 631, 808, 883
Tru1I TTAA 2 cut(s) 177, 600
Tru9I TTAA 2 cut(s) 177, 600
TscAI CASTG 4 cut(s) 271, 361, 700, 760
TseI GCWGC 7 cut(s) 146, 149, 158, 161, 335, 671, 710
TspDTI ATGAA 2 cut(s) 333, 540
TspGWI ACGGA 1 cut(s) 277
TspRI CASTG 4 cut(s) 271, 361, 700, 760
VneI GTGCAC 3 cut(s) 209, 471, 863
VpaK11BI GGWCC 1 cut(s) 737
XceI RCATGY 1 cut(s) 410
XcmI CCANNNNNNNNNTGG 1 cut(s) 632
XspI CTAG 1 cut(s) 558
ZrmI AGTACT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.