Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002638

Physical Location & Seq

Genomic Coordinates Reverse (-)

36996058 .. 36998667

Gene Structure 2610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG333700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGTACGGCAGGGATCCATGGGGCGGGCCGCTGGAGATCAACACGGCGGACTCGGCCACCGACGACGACCGCAGCCGGAACCTGCAGGACCTCGACCGGGCGGCGCTGTCGTCGCGGCCGCTCGACGAGACGCAGCAGAGCTGGCTGCTGGGCCCCACCGGGGAGCAGAAGAAGAAGAAGTACGTGGATCTGGGGTGCGTCATCGTCAGCCGCAAGATCTTTATCTGGACGGTAGGGACGCTCCTCGTCTCCGGCTTGCTCGCCGGGCTGATCGTCCTCATCGTCAAGACCGTGCCGCGTCACCACCACGCCAAGGCTCCTCCGGACAACTACACTCTCGCTCTCCACAAGGCTCTCATGTTCTTCAACGCTCAGAAATCTGGTAAGCTTCCGAAGCACAATAATGTTTCGTGGAGGGGGAACTCGTGCGTGAACGATGGTGAACCCAACACCATGTTCAAGGATCTGTCGGGTGGTTACTATGATGCTGGAGATGCCATCAAGTTCAACTTCCCTCAGTCATTCGCCATGACTCTGCTGAGCTGGAGCGTGATCGAGTACAGTGCCAAGTACGAAGCCGCTGGGGAACTAGCTCATGCAAAGGAGCTCATCAAATGGGGCGCTGATTACTTCCTCAAGACCTTCAACCATACCGCTGATACAATCGACACCATGGTTTCGCAGGTTGGGTCAGGAGATACTGCTAAAGGGAGTACTACTCCTAATGATCACTATTGCTGGACTCGACCCGAAGACATTGATTATAAACGCCCTGTGTTTCAGACCAGTAGTTGCGCTGATCTTGCATCTGAGATGGCTGCAGCTTTGGCTGCCGCATCCATAGTGTTTAAGGACAACAAGGCCTACTCGCAGAAACTTGTGCACGGCGCCACAACGCTCTTCACGTTCGGAAGGAGTCGAGGAAGAGGCCTCTACAGTGCTCCTGGTTCAGAGGCTTCCGTCTTTTACAATTCTACGTTGTACTGGGATGAATACGTGTGGGGTGCTGCTTGGATGTATTATGCCACTGGGAATAACTCTTATCTTACTCTCGCAACGCATCCTACTCTTGCCAAGCATGCTGGTGCCTTCTGGGGCGGCCCTGATTATGGAGTATTCAGTTGGGACAACAAACTTGCTGGTGCACAGGTGCTTCTGACCCGTTTGAGGTTATTCTTGAGCCCTGGTTACCCATATGAAGAAATCTTGAGGACATTTCAGAATCAGACTAGCATAGTCATGTGCTCGTACCTGCCAATATTCACATCATTTAATAGAACCAAAGGTGGCTTGATCCAGTTGAATCATGGAAGGCCTCAACCACTTCAATATGTGGTGAATGCAGCCTTCTTAGCAACCTTGTTCAGTGATTATCTTGATGCTGCCGATACTCCTGGATGGTATTGTGGACCCAACTTCTATTCCACTGATGTCTTGCGTAATTTTGCTAAGTTTCAGGTTGATTACATTCTTGGCAAGAATCCCCGGAAAATGAGCTATGTTACAGGTTTTGGCAATCATTACCCAAAACAAGTGCACCATAGAGGTGCATCGATTCCCAAGAATAAGATCAAATACAATTGCAAAGGGGGTTGGAAATGGAGGGACTCAAAAAAGCCAAACCCAAATATTATTGAAGGTGCCATGGTGGCTGGGCCTGACAAAAAAGATGGTTTCCATGATGTTCGTACTAATTACAATTACACAGAGCCAACTCTTGCTGGAAATGCAGGTTTGGTATTTGCGCTTGTTGGTTTGTCTGGAGACAAGTCTGTTGGTATTGATAAAAATACCATTTTCTCCGCGGTTCCCCCAATGTTTCCAACTCCTCCACCTCCTCCGGCACCCTGGAAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008152 GO:0008810 GO:0009058 GO:0009059 GO:0009250 GO:0009504 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042538 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_9

Protein Analysis

619

Amino Acids

68.61

Weight (kDa)

8.99

Isoelectric Point (pI)

30.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_9	PF00759	111 - 583	1e-140	Glycosyl hydrolase family 9

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24260 AT4G24260 AT4G24260 AT5G49720
fragaria_vesca	FvH4_5g27130 FvH4_5g27130 FvH4_5g27130 FvH4_5g27130
malus_domestica	MD04G1170800.v1.1 MD08G1250900.v1.1 MD15G1445800.v1.1
prunus_persica	Prupe.1G587900_v2.0.a1 Prupe.3G082700_v2.0.a1
pyrus_communis	pycom04g15140 pycom08g21760 pycom15g39260 pycom15g39270
rosa_chinensis	RchiOBHm_Chr7g0218131
rosa_laevigata	RLG00000002397 RLG00000003204 RLG00000029460
rosa_multiflora	Rmu_sc0000054.1_g000022 Rmu_sc0003627.1_g000012 Rmu_sc0031732.1_g000002
rosa_roxburghii	Rroxscaffold_3G00233940 Rroxscaffold_3G00241280
rosa_rugosa	Rorug01G0072800 Rorug02G0384500 Rorug04G0442400 Rorug07G0174400
rosa_samantha	Rh4CG311700 Rh4DG293000 Rh6BG152200 Rh6DG136400 Rh7AG316800 Rh7BG307900 Rh7BG308000 Rh7CG333700 Rh7DG315700
rosa_wichuraiana	Rw7G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	765
Acc36I	ACCTGC	4 cut(s)	90, 673, 1260, 1721
AccB1I	GGYRCC	4 cut(s)	887, 1085, 1640, 1843
AccBSI	CCGCTC	1 cut(s)	121
AccII	CGCG	3 cut(s)	115, 298, 1805
AccIII	TCCGGA	1 cut(s)	322
AclWI	GGATC	5 cut(s)	8, 21, 195, 471, 1288
AcoI	YGGCCR	2 cut(s)	54, 116
AcyI	GRCGYC	1 cut(s)	888
AfaI	GTAC	8 cut(s)	5, 182, 560, 572, 715, 983, 1250, 1690
AfiI	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
AflIII	ACRYGT	1 cut(s)	996
AgsI	TTSAA	7 cut(s)	367, 460, 508, 646, 1303, 1328, 1637
AjnI	CCWGG	4 cut(s)	943, 1183, 1393, 1847
AjuI	GAANNNNNNNTTGG	2 cut(s)	440, 472
AluBI	AGCT	7 cut(s)	141, 388, 543, 593, 607, 824, 1497
AluI	AGCT	7 cut(s)	141, 388, 543, 593, 607, 824, 1497
Alw21I	GWGCWC	6 cut(s)	609, 885, 943, 1147, 1247, 1539
Alw26I	GTCTC	3 cut(s)	122, 253, 1758
Alw44I	GTGCAC	3 cut(s)	881, 1143, 1535
AlwI	GGATC	5 cut(s)	8, 21, 195, 471, 1288
Aor13HI	TCCGGA	1 cut(s)	322
AoxI	GGCC	9 cut(s)	26, 54, 116, 151, 861, 928, 1099, 1313, 1655
ApaI	GGGCCC	1 cut(s)	155
ApaLI	GTGCAC	3 cut(s)	881, 1143, 1535
ApeKI	GCWGC	9 cut(s)	72, 133, 145, 818, 821, 830, 1007, 1343, 1382
AspLEI	GCGC	5 cut(s)	106, 623, 797, 890, 1747
AspS9I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1655
AsuC2I	CCSGG	4 cut(s)	98, 160, 265, 1486
AsuHPI	GGTGA	3 cut(s)	293, 452, 1348
AvaII	GGWCC	2 cut(s)	88, 1409
BaeGI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BamHI	GGATCC	1 cut(s)	13
BanI	GGYRCC	4 cut(s)	887, 1085, 1640, 1843
BanII	GRGCYC	3 cut(s)	155, 609, 1184
BarI	GAAGNNNNNNTAC	2 cut(s)	164, 196
BauI	CACGAG	1 cut(s)	424
BbsI	GAAGAC	1 cut(s)	759
Bbv12I	GWGCWC	6 cut(s)	609, 885, 943, 1147, 1247, 1539
BbvI	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 994, 1355, 1369
BccI	CCATC	5 cut(s)	431, 506, 808, 1392, 1664
BceAI	ACGGC	3 cut(s)	22, 60, 901
BcgI	CGANNNNNNTGC	2 cut(s)	545, 579
BciT130I	CCWGG	4 cut(s)	945, 1185, 1395, 1849
BclI	TGATCA	1 cut(s)	727
BcnI	CCSGG	4 cut(s)	98, 160, 265, 1486
BcoDI	GTCTC	3 cut(s)	122, 253, 1758
BfaI	CTAG	2 cut(s)	590, 1230
BfmI	CTRYAG	3 cut(s)	83, 819, 934
BfoI	RGCGCY	3 cut(s)	107, 624, 891
BfuAI	ACCTGC	4 cut(s)	90, 673, 1260, 1721
BglI	GCCNNNNNGGC	1 cut(s)	1649
BglII	AGATCT	1 cut(s)	216
BlpI	GCTNAGC	1 cut(s)	539
BmcAI	AGTACT	1 cut(s)	715
Bme1390I	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 1849
Bme18I	GGWCC	2 cut(s)	88, 1409
BmgT120I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1655
BmrFI	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 1849
BmrI	ACTGGG	2 cut(s)	994, 1038
BmsI	GCATC	7 cut(s)	475, 484, 815, 845, 1069, 1369, 1559
BmuI	ACTGGG	2 cut(s)	994, 1038
BpiI	GAAGAC	1 cut(s)	759
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
BpmI	CTGGAG	4 cut(s)	53, 510, 565, 1782
Bpu1102I	GCTNAGC	1 cut(s)	539
BpuEI	CTTGAG	3 cut(s)	620, 1198, 1228
BpuMI	CCSGG	4 cut(s)	98, 160, 265, 1486
Bsa29I	ATCGAT	1 cut(s)	1553
BsaAI	YACGTR	2 cut(s)	184, 997
BsaBI	GATNNNNATC	1 cut(s)	221
BsaHI	GRCGYC	1 cut(s)	888
BsaJI	CCNNGG	9 cut(s)	17, 159, 312, 672, 1183, 1484, 1644, 1803, 1847
BsaWI	WCCGGW	1 cut(s)	322
Bsc4I	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
Bse1I	ACTGG	4 cut(s)	786, 989, 1033, 1297
Bse8I	GATNNNNATC	1 cut(s)	221
BseAI	TCCGGA	1 cut(s)	322
BseBI	CCWGG	4 cut(s)	945, 1185, 1395, 1849
BseCI	ATCGAT	1 cut(s)	1553
BseDI	CCNNGG	9 cut(s)	17, 159, 312, 672, 1183, 1484, 1644, 1803, 1847
BseGI	GGATG	5 cut(s)	836, 994, 1020, 1060, 1403
BseJI	GATNNNNATC	1 cut(s)	221
BseLI	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
BseMII	CTCAG	4 cut(s)	386, 530, 530, 801
BseNI	ACTGG	4 cut(s)	786, 989, 1033, 1297
BseRI	GAGGAG	4 cut(s)	233, 309, 1818, 1827
BseSI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BseX3I	CGGCCG	1 cut(s)	116
BseXI	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 994, 1355, 1369
BseYI	CCCAGC	3 cut(s)	148, 581, 1652
Bsh1236I	CGCG	3 cut(s)	115, 298, 1805
Bsh1285I	CGRYCG	3 cut(s)	70, 97, 119
BshFI	GGCC	9 cut(s)	28, 56, 118, 153, 863, 930, 1101, 1315, 1657
BshNI	GGYRCC	4 cut(s)	887, 1085, 1640, 1843
BshVI	ATCGAT	1 cut(s)	1553
BsiEI	CGRYCG	3 cut(s)	70, 97, 119
BsiHKAI	GWGCWC	6 cut(s)	609, 885, 943, 1147, 1247, 1539
BsiSI	CCGG	8 cut(s)	76, 97, 159, 252, 264, 323, 1486, 1841
BslFI	GGGAC	3 cut(s)	250, 1139, 1619
BslI	CCNNNNNNNGG	6 cut(s)	23, 97, 160, 313, 1109, 1167
BsmAI	GTCTC	3 cut(s)	122, 253, 1758
BsmBI	CGTCTC	2 cut(s)	122, 253
BsmFI	GGGAC	3 cut(s)	250, 1139, 1619
BsmI	GAATGC	1 cut(s)	1345
BsnI	GGCC	9 cut(s)	28, 56, 118, 153, 863, 930, 1101, 1315, 1657
Bsp120I	GGGCCC	1 cut(s)	151
Bsp1286I	GDGCHC	8 cut(s)	155, 609, 885, 943, 1147, 1184, 1247, 1539
Bsp13I	TCCGGA	1 cut(s)	322
Bsp1720I	GCTNAGC	1 cut(s)	539
Bsp19I	CCATGG	3 cut(s)	17, 672, 1644
BspANI	GGCC	9 cut(s)	28, 56, 118, 153, 863, 930, 1101, 1315, 1657
BspCNI	CTCAG	4 cut(s)	385, 529, 531, 802
BspDI	ATCGAT	1 cut(s)	1553
BspEI	TCCGGA	1 cut(s)	322
BspFNI	CGCG	3 cut(s)	115, 298, 1805
BspMAI	CTGCAG	2 cut(s)	87, 823
BspMI	ACCTGC	4 cut(s)	90, 673, 1260, 1721
BspPI	GGATC	5 cut(s)	8, 21, 195, 471, 1288
BspQI	GCTCTTC	1 cut(s)	905
BspT107I	GGYRCC	4 cut(s)	887, 1085, 1640, 1843
BsrBI	CCGCTC	1 cut(s)	121
BsrI	ACTGG	4 cut(s)	786, 989, 1033, 1297
BssECI	CCNNGG	9 cut(s)	17, 159, 312, 672, 1183, 1484, 1644, 1803, 1847
BssNI	GRCGYC	1 cut(s)	888
BssSI	CACGAG	1 cut(s)	424
BssT1I	CCWWGG	4 cut(s)	17, 312, 672, 1644
Bst2BI	CACGAG	1 cut(s)	424
Bst2UI	CCWGG	4 cut(s)	945, 1185, 1395, 1849
Bst4CI	ACNGT	4 cut(s)	232, 292, 563, 938
Bst6I	CTCTTC	2 cut(s)	905, 919
BstACI	GRCGYC	1 cut(s)	888
BstBAI	YACGTR	2 cut(s)	184, 997
BstC8I	GCNNGC	5 cut(s)	26, 143, 257, 261, 1080
BstDEI	CTNAG	6 cut(s)	372, 516, 539, 810, 1351, 1449
BstDSI	CCRYGG	4 cut(s)	17, 672, 1644, 1803
BstEII	GGTNACC	1 cut(s)	1187
BstF5I	GGATG	5 cut(s)	836, 994, 1020, 1060, 1403
BstFNI	CGCG	3 cut(s)	115, 298, 1805
BstH2I	RGCGCY	3 cut(s)	107, 624, 891
BstHHI	GCGC	5 cut(s)	106, 623, 797, 890, 1747
BstMAI	GTCTC	3 cut(s)	122, 253, 1758
BstMCI	CGRYCG	3 cut(s)	70, 97, 119
BstNI	CCWGG	4 cut(s)	945, 1185, 1395, 1849
BstNSI	RCATGY	1 cut(s)	1082
BstPI	GGTNACC	1 cut(s)	1187
BstSCI	CCNGG	8 cut(s)	96, 158, 263, 943, 1183, 1393, 1484, 1847
BstSFI	CTRYAG	3 cut(s)	83, 819, 934
BstSLI	GKGCMC	4 cut(s)	155, 885, 1147, 1539
BstUI	CGCG	3 cut(s)	115, 298, 1805
BstV1I	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 994, 1355, 1369
BstV2I	GAAGAC	1 cut(s)	759
BstX2I	RGATCY	4 cut(s)	13, 187, 216, 463
BstYI	RGATCY	4 cut(s)	13, 187, 216, 463
BstZI	CGGCCG	1 cut(s)	116
Bsu15I	ATCGAT	1 cut(s)	1553
BsuRI	GGCC	9 cut(s)	28, 56, 118, 153, 863, 930, 1101, 1315, 1657
BsuTUI	ATCGAT	1 cut(s)	1553
BtgI	CCRYGG	4 cut(s)	17, 672, 1644, 1803
BtsCI	GGATG	5 cut(s)	836, 994, 1020, 1060, 1403
BtsIMutI	CAGTG	5 cut(s)	568, 943, 1026, 1372, 1425
BveI	ACCTGC	4 cut(s)	90, 673, 1260, 1721
Cac8I	GCNNGC	5 cut(s)	26, 143, 257, 261, 1080
CciNI	GCGGCCGC	1 cut(s)	116
CfoI	GCGC	5 cut(s)	106, 623, 797, 890, 1747
Cfr13I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1655
Cfr42I	CCGCGG	1 cut(s)	1806
ClaI	ATCGAT	1 cut(s)	1553
CseI	GACGC	4 cut(s)	139, 187, 247, 287
Csp6I	GTAC	8 cut(s)	4, 181, 559, 571, 714, 982, 1249, 1689
CviQI	GTAC	8 cut(s)	4, 181, 559, 571, 714, 982, 1249, 1689
DdeI	CTNAG	6 cut(s)	372, 516, 539, 810, 1351, 1449
DinI	GGCGCC	1 cut(s)	889
EaeI	YGGCCR	2 cut(s)	54, 116
EagI	CGGCCG	1 cut(s)	116
Eam1104I	CTCTTC	2 cut(s)	905, 919
EarI	CTCTTC	2 cut(s)	905, 919
EciI	GGCGGA	1 cut(s)	62
Ecl136II	GAGCTC	1 cut(s)	607
EclXI	CGGCCG	1 cut(s)	116
Eco130I	CCWWGG	4 cut(s)	17, 312, 672, 1644
Eco147I	AGGCCT	3 cut(s)	863, 930, 1315
Eco24I	GRGCYC	3 cut(s)	155, 609, 1184
Eco47I	GGWCC	2 cut(s)	88, 1409
Eco52I	CGGCCG	1 cut(s)	116
Eco53kI	GAGCTC	1 cut(s)	607
Eco91I	GGTNACC	1 cut(s)	1187
EcoICRI	GAGCTC	1 cut(s)	607
EcoO109I	RGGNCCY	2 cut(s)	88, 152
EcoO65I	GGTNACC	1 cut(s)	1187
EcoRII	CCWGG	4 cut(s)	943, 1183, 1393, 1847
EcoT14I	CCWWGG	4 cut(s)	17, 312, 672, 1644
EcoT38I	GRGCYC	3 cut(s)	155, 609, 1184
EgeI	GGCGCC	1 cut(s)	889
EheI	GGCGCC	1 cut(s)	889
ErhI	CCWWGG	4 cut(s)	17, 312, 672, 1644
Esp3I	CGTCTC	2 cut(s)	122, 253
FalI	AAGNNNNNCTT	2 cut(s)	494, 526
FaqI	GGGAC	3 cut(s)	250, 1139, 1619
FauI	CCCGC	1 cut(s)	17
FauNDI	CATATG	1 cut(s)	1195
FbaI	TGATCA	1 cut(s)	727
FokI	GGATG	5 cut(s)	823, 1001, 1027, 1047, 1410
FriOI	GRGCYC	3 cut(s)	155, 609, 1184
FspBI	CTAG	2 cut(s)	590, 1230
GlaI	GCGC	5 cut(s)	105, 622, 796, 889, 1746
GsaI	CCCAGC	3 cut(s)	152, 585, 1656
GsuI	CTGGAG	4 cut(s)	53, 510, 565, 1782
HaeII	RGCGCY	3 cut(s)	107, 624, 891
HaeIII	GGCC	9 cut(s)	28, 56, 118, 153, 863, 930, 1101, 1315, 1657
HapII	CCGG	8 cut(s)	76, 97, 159, 252, 264, 323, 1486, 1841
HgaI	GACGC	4 cut(s)	139, 187, 247, 287
HhaI	GCGC	5 cut(s)	106, 623, 797, 890, 1747
Hin1I	GRCGYC	1 cut(s)	888
Hin6I	GCGC	5 cut(s)	104, 621, 795, 888, 1745
HinP1I	GCGC	5 cut(s)	104, 621, 795, 888, 1745
HindIII	AAGCTT	1 cut(s)	386
HinfI	GANTC	9 cut(s)	50, 532, 742, 916, 1222, 1303, 1480, 1555, 1607
HpaII	CCGG	8 cut(s)	76, 97, 159, 252, 264, 323, 1486, 1841
HphI	GGTGA	3 cut(s)	293, 452, 1348
Hpy166II	GTNNAC	6 cut(s)	433, 443, 883, 1145, 1409, 1537
Hpy188I	TCNGA	9 cut(s)	375, 393, 783, 811, 911, 952, 1158, 1221, 1227
Hpy188III	TCNNGA	9 cut(s)	226, 286, 323, 637, 693, 1177, 1207, 1376, 1761
Hpy8I	GTNNAC	6 cut(s)	433, 443, 883, 1145, 1409, 1537
Hpy99I	CGWCG	4 cut(s)	65, 68, 115, 128
HpyAV	CCTTC	6 cut(s)	652, 906, 1099, 1305, 1357, 1631
HpyCH4III	ACNGT	4 cut(s)	232, 292, 563, 938
HpyCH4IV	ACGT	4 cut(s)	183, 905, 977, 996
HpyF3I	CTNAG	6 cut(s)	372, 516, 539, 810, 1351, 1449
HpySE526I	ACGT	4 cut(s)	183, 905, 977, 996
Hsp92I	GRCGYC	1 cut(s)	888
HspAI	GCGC	5 cut(s)	104, 621, 795, 888, 1745
KasI	GGCGCC	1 cut(s)	887
Kpn2I	TCCGGA	1 cut(s)	322
Ksp22I	TGATCA	1 cut(s)	727
KspI	CCGCGG	1 cut(s)	1806
LguI	GCTCTTC	1 cut(s)	905
LmnI	GCTCC	6 cut(s)	163, 246, 322, 546, 604, 946
Lsp1109I	GCAGC	9 cut(s)	84, 132, 145, 805, 817, 833, 994, 1355, 1369
LweI	GCATC	7 cut(s)	475, 484, 815, 845, 1069, 1369, 1559
MaeI	CTAG	2 cut(s)	590, 1230
MaeII	ACGT	4 cut(s)	183, 905, 977, 996
MaeIII	GTNAC	4 cut(s)	299, 476, 1187, 1501
MbiI	CCGCTC	1 cut(s)	121
MboII	GAAGA	8 cut(s)	181, 184, 187, 355, 764, 892, 936, 1211
MfeI	CAATTG	1 cut(s)	1579
MflI	RGATCY	4 cut(s)	13, 187, 216, 463
MhlI	GDGCHC	8 cut(s)	155, 609, 885, 943, 1147, 1184, 1247, 1539
MluCI	AATT	5 cut(s)	970, 1441, 1579, 1693, 1699
Mly113I	GGCGCC	1 cut(s)	888
MlyI	GAGTC	5 cut(s)	44, 526, 736, 925, 1601
MmeI	TCCRAC	2 cut(s)	1574, 1847
MroI	TCCGGA	1 cut(s)	322
MseI	TTAA	2 cut(s)	849, 1272
MslI	CAYNNNNRTG	4 cut(s)	402, 1083, 1238, 1545
MspA1I	CMGCKG	4 cut(s)	31, 581, 656, 1805
MspI	CCGG	8 cut(s)	76, 97, 159, 252, 264, 323, 1486, 1841
MspR9I	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 1849
MunI	CAATTG	1 cut(s)	1579
Mva1269I	GAATGC	1 cut(s)	1345
MvaI	CCWGG	4 cut(s)	945, 1185, 1395, 1849
MvnI	CGCG	3 cut(s)	115, 298, 1805
NarI	GGCGCC	1 cut(s)	888
NciI	CCSGG	4 cut(s)	98, 160, 265, 1486
NcoI	CCATGG	3 cut(s)	17, 672, 1644
NdeI	CATATG	1 cut(s)	1195
NmeAIII	GCCGAG	1 cut(s)	32
NmuCI	GTSAC	1 cut(s)	299
NotI	GCGGCCGC	1 cut(s)	116
NspI	RCATGY	1 cut(s)	1082
PaeI	GCATGC	1 cut(s)	1082
PceI	AGGCCT	3 cut(s)	863, 930, 1315
PciSI	GCTCTTC	1 cut(s)	905
PcsI	WCGNNNNNNNCGW	3 cut(s)	279, 288, 902
PctI	GAATGC	1 cut(s)	1345
PfeI	GAWTC	4 cut(s)	1222, 1303, 1480, 1555
PfoI	TCCNGGA	1 cut(s)	1393
PleI	GAGTC	5 cut(s)	44, 526, 736, 924, 1601
PluTI	GGCGCC	1 cut(s)	891
PpsI	GAGTC	5 cut(s)	44, 526, 736, 924, 1601
Ppu21I	YACGTR	2 cut(s)	184, 997
PpuMI	RGGWCCY	1 cut(s)	88
PsiI	TTATAA	1 cut(s)	765
Psp124BI	GAGCTC	1 cut(s)	609
Psp5II	RGGWCCY	1 cut(s)	88
Psp6I	CCWGG	4 cut(s)	943, 1183, 1393, 1847
PspEI	GGTNACC	1 cut(s)	1187
PspFI	CCCAGC	3 cut(s)	148, 581, 1652
PspGI	CCWGG	4 cut(s)	943, 1183, 1393, 1847
PspOMI	GGGCCC	1 cut(s)	151
PspPI	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1655
PspPPI	RGGWCCY	1 cut(s)	88
PstI	CTGCAG	2 cut(s)	87, 823
PsuI	RGATCY	4 cut(s)	13, 187, 216, 463
RsaI	GTAC	8 cut(s)	5, 182, 560, 572, 715, 983, 1250, 1690
RsaNI	GTAC	8 cut(s)	4, 181, 559, 571, 714, 982, 1249, 1689
RseI	CAYNNNNRTG	4 cut(s)	402, 1083, 1238, 1545
SacI	GAGCTC	1 cut(s)	609
SacII	CCGCGG	1 cut(s)	1806
SapI	GCTCTTC	1 cut(s)	905
SaqAI	TTAA	2 cut(s)	849, 1272
Sau96I	GGNCC	7 cut(s)	26, 88, 151, 152, 1100, 1409, 1655
SbfI	CCTGCAGG	1 cut(s)	87
ScaI	AGTACT	1 cut(s)	715
SchI	GAGTC	5 cut(s)	44, 526, 736, 925, 1601
ScrFI	CCNGG	8 cut(s)	98, 160, 265, 945, 1185, 1395, 1486, 1849
SdaI	CCTGCAGG	1 cut(s)	87
SduI	GDGCHC	8 cut(s)	155, 609, 885, 943, 1147, 1184, 1247, 1539
SfaNI	GCATC	7 cut(s)	475, 484, 815, 845, 1069, 1369, 1559
SfcI	CTRYAG	3 cut(s)	83, 819, 934
SfoI	GGCGCC	1 cut(s)	889
Sfr303I	CCGCGG	1 cut(s)	1806
SgrBI	CCGCGG	1 cut(s)	1806
SinI	GGWCC	2 cut(s)	88, 1409
SmiMI	CAYNNNNRTG	4 cut(s)	402, 1083, 1238, 1545
SmlI	CTYRAG	3 cut(s)	635, 1177, 1207
SmoI	CTYRAG	3 cut(s)	635, 1177, 1207
SphI	GCATGC	1 cut(s)	1082
Sse8387I	CCTGCAGG	1 cut(s)	87
Sse9I	AATT	5 cut(s)	970, 1441, 1579, 1693, 1699
SseBI	AGGCCT	3 cut(s)	863, 930, 1315
SspDI	GGCGCC	1 cut(s)	887
SspI	AATATT	2 cut(s)	1260, 1630
SspMI	CTAG	2 cut(s)	590, 1230
SstI	GAGCTC	1 cut(s)	609
StuI	AGGCCT	3 cut(s)	863, 930, 1315
StyD4I	CCNGG	8 cut(s)	96, 158, 263, 943, 1183, 1393, 1484, 1847
StyI	CCWWGG	4 cut(s)	17, 312, 672, 1644
TaaI	ACNGT	4 cut(s)	232, 292, 563, 938
TaiI	ACGT	4 cut(s)	186, 908, 980, 999
TaqI	TCGA	7 cut(s)	93, 123, 555, 666, 745, 919, 1553
TasI	AATT	5 cut(s)	970, 1441, 1579, 1693, 1699
TatI	WGTACW	3 cut(s)	558, 713, 981
TauI	GCSGC	9 cut(s)	31, 104, 118, 121, 213, 298, 581, 836, 1101
TfiI	GAWTC	4 cut(s)	1222, 1303, 1480, 1555
Tru1I	TTAA	2 cut(s)	849, 1272
Tru9I	TTAA	2 cut(s)	849, 1272
TscAI	CASTG	5 cut(s)	568, 943, 1033, 1372, 1432
TseFI	GTSAC	1 cut(s)	299
TseI	GCWGC	9 cut(s)	72, 133, 145, 818, 821, 830, 1007, 1343, 1382
Tsp45I	GTSAC	1 cut(s)	299
TspDTI	ATGAA	2 cut(s)	1005, 1212
TspGWI	ACGGA	1 cut(s)	949
TspRI	CASTG	5 cut(s)	568, 943, 1033, 1372, 1432
VneI	GTGCAC	3 cut(s)	881, 1143, 1535
VpaK11BI	GGWCC	2 cut(s)	88, 1409
XceI	RCATGY	1 cut(s)	1082
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XspI	CTAG	2 cut(s)	590, 1230
ZrmI	AGTACT	1 cut(s)	715

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.