Rroxscaffold_6G00417670

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0004862
Physical Location & Seq
Forward (+)
39338352 .. 39351686
13335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00417670.1

Sequence Viewer

Length: 2127 bp
ATGGAATCTGCATTTCTTGAGCCTTGGTTTTTCGAAAATTTTATAGACTCATCTTTTGACCAACCTGATTTCATCAACATGGATGATACTCCAATTGATAGCCCAGACTTCTCTTCTCTGTTCAACTCAAATGAAGTTTTCAAAATTTCGGAAATTGCATCAGACCCTTTTGCCACCCTGTTTCCTGGTGATGATCTGATTCAAGTGACATCCCAAGTGGAGGAAGTTTCAATGGATTTGGAAGTGTATGAGACTAATTTGATGATAGAGGGTTTCTATGGTAATTCATTGGAAGGGAGTGAAGGGAGTTTTCCATCACAGCAAGCTTCTTCACACCAATATTCTACTGAAGGAAATGATGTGTGGAGTCCAAATTCAATAGTGAATTCTGAAGCATCATCTATGGACTCAACATCAATCCAATCACCACTAACTTTGCCTAGAGAAGAGGAGGGAATCGAGAACCAATTGAGTATTCGTCATCTACTTCAAGCTTTTGCTGAAGCCAAGGAATATGGCCAGAAAGATCTAGAGGAGGTTATTCTCAGATGCATCAGTGAGAAAGTCAGCCCAATTGGAGAGTCTTCCGAGCGCCTTGCATTCAACTTGTGCCAAGAAGTTGTTGATGAACATCAACAAGGCGGCGATTATCTCAAACAAGAATCCTTGAAGAATTTTGAGGCTGCATTTAAGGTGTTCATCCAAAATTTCCCCTATGCTAGGTTTGCTCACTATGTAGCCAACTCAGCAATCCTCGAGGCGATTCCAGTGGAAGCTGAGACAGTTCACATAGTGGATTTTGACATGAGAGAAGGGGTCCAGTTGTCTCAACTTATTGAGGCTTTAGCACAAAGATTCAAAACTCTAAAAGTGACAGCAATCAAGTGGGAAGAGGAAGAGAGTGATTGTGCTCCTTCACACGGGAGATTTGAGGAGACAAAGAAGCAACTCCAGAACCATGCTAGATCCTTTGGCTTAAACTTAAAGGTGGAAGAAGTAGCAATGGAGGAATTGGTTACTGAGATAAAGAAGGCAAAGAAGAGGGGTGGAGGGAAAGAATTCTTAGCCTTCAACTGTATGGTTTCACTTCCACACATGAGGAGGAGAAGAAGCAGAGGGCATGTCATGGAGTATCTGAGACTGGCTAAGGAGTTGTTAGCCAATTCTGGGAACTCCAAGACTACTAAAAGTGGTATTATAACTTTTGGTGATGGGGATGCTTGTGAGAGACTTGGAAATCACTCGAGTTTCAGCTCATTCTTTAATGAGAACCTAGTGCATTACCAAGCCTTGTTGGAGTCAATGGAGTCGAATTTCCCAAGTCATCTAGCAGAAGCAAGAATGGTGATGGAATGCATCTTCATAGCACCTTTTGTCTCTTCCCAGGCTTGGTTCCAAAAGTGGACAGAAATGAAGGACTGCCATGTTCAACCATGGTTCGGGCTTGAGGGTCGGAGATTGAGCAAAGAAAATTTGATGGAAGCCAAGGAAATTGTGGGAGATGAAAGATCCTATGGAATCAGGATTGAAGGACTTAATGGGAATGAAATGGTATTGGAATGGAGAGGAACTCCTCTGACTACCCAACTATTCGACAGCCTCTATTCATCCTCTTCGTTCTACGCCTCCGACCAAAACCTAAATCCTCTTGGTTCTTCGAATCCAACCAGAACTCGACGCCTCGTCCTCCTTCTTTTTCGAGTCAGACCAGCTCCTGTGCTCCAAGACAGTGAACAGGATCGGAGACCGAGGCCGCCGTTTCGGAGAAACTTTGAGCTTCTGAGTCATAGCTCCTATGGTCAGACTTTGACTACAAGCACATATACCAGTGAAACTTCTTTTGCTATACTTATTGCTATTTTGGGTCTGGTTCTGTTTGCACACTTAATTGGAAATATGCAGTTTTTCGATCTGAGCTTCCGAACTAGACGTTTTAAGGCTTCCAAGAAGACAGATGTGCACAGGAATGGGAAAAAGATGCAGTGGGTGTGCGTTGGCTTGTTTGCGCAGCAGGGATGCTTCGGTGGCAGCAGGATGGAACGCAGGGCTGCAGGGAGGGGGCAGCAGGGGCTGCTGTGCAAGGTTGCAAGCGCACGGGCGCGCGGGCTGCAGCGAAGGCTCGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

708

Amino Acids

80.21

Weight (kDa)

5.43

Isoelectric Point (pI)

51.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 160 - 528 5.3e-42 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1199
AbsI CCTCGAGG 1 cut(s) 755
Acc16I TGCGCA 1 cut(s) 2007
AccII CGCG 2 cut(s) 2101, 2103
AciI CCGC 3 cut(s) 642, 1754, 2103
AclWI GGATC 3 cut(s) 960, 1503, 1746
AcoI YGGCCR 1 cut(s) 517
AcsI RAATTY 9 cut(s) 37, 144, 373, 385, 673, 706, 1058, 1312, 1471
AcuI CTGAAG 3 cut(s) 369, 411, 522
AcyI GRCGYC 1 cut(s) 1678
AdeI CACNNNGTG 1 cut(s) 793
AfiI CCNNNNNNNGG 6 cut(s) 220, 720, 920, 1167, 1389, 1439
AhdI GACNNNNNGTC 1 cut(s) 1682
AjnI CCWGG 2 cut(s) 184, 1383
AjuI GAANNNNNNNTTGG 2 cut(s) 459, 491
AluBI AGCT 8 cut(s) 326, 494, 776, 1254, 1712, 1777, 1791, 1917
AluI AGCT 8 cut(s) 326, 494, 776, 1254, 1712, 1777, 1791, 1917
Alw21I GWGCWC 3 cut(s) 913, 1722, 1962
Alw26I GTCTC 8 cut(s) 245, 773, 831, 929, 1132, 1222, 1381, 1738
Alw44I GTGCAC 1 cut(s) 1958
AlwI GGATC 3 cut(s) 960, 1503, 1746
AlwNI CAGNNNCTG 2 cut(s) 1715, 2071
Ama87I CYCGRG 2 cut(s) 755, 1243
AoxI GGCC 2 cut(s) 517, 1751
ApaLI GTGCAC 1 cut(s) 1958
ApeKI GCWGC 8 cut(s) 683, 2008, 2028, 2048, 2062, 2071, 2107, 2110
ApoI RAATTY 9 cut(s) 37, 144, 373, 385, 673, 706, 1058, 1312, 1471
ArsI GACNNNNNNTTYG 2 cut(s) 38, 70
Asp700I GAANNNNTTC 1 cut(s) 1058
AspLEI GCGC 5 cut(s) 594, 2008, 2093, 2101, 2103
AspS9I GGNCC 1 cut(s) 817
AsuHPI GGTGA 4 cut(s) 200, 417, 1220, 1357
AsuII TTCGAA 2 cut(s) 33, 1658
AvaI CYCGRG 2 cut(s) 755, 1243
AvaII GGWCC 1 cut(s) 817
BaeGI GKGCMC 1 cut(s) 1962
BalI TGGCCA 1 cut(s) 519
BbsI GAAGAC 2 cut(s) 576, 1955
Bbv12I GWGCWC 3 cut(s) 913, 1722, 1962
BbvI GCAGC 8 cut(s) 670, 2020, 2035, 2040, 2058, 2074, 2094, 2122
BccI CCATC 5 cut(s) 322, 1205, 1342, 1471, 2029
BceAI ACGGC 1 cut(s) 1741
BcgI CGANNNNNNTGC 2 cut(s) 578, 612
BciT130I CCWGG 2 cut(s) 186, 1385
BcoDI GTCTC 8 cut(s) 245, 773, 831, 929, 1132, 1222, 1381, 1738
BfaI CTAG 8 cut(s) 441, 530, 720, 963, 1274, 1328, 1926, 2125
BfmI CTRYAG 2 cut(s) 2049, 2108
BfoI RGCGCY 1 cut(s) 595
BglII AGATCT 1 cut(s) 526
Bme1390I CCNGG 2 cut(s) 186, 1385
Bme18I GGWCC 1 cut(s) 817
BmeRI GACNNNNNGTC 1 cut(s) 1682
BmeT110I CYCGRG 2 cut(s) 755, 1243
BmgT120I GGNCC 1 cut(s) 817
BmiI GGNNCC 2 cut(s) 818, 1394
BmrFI CCNGG 2 cut(s) 186, 1385
BmsI GCATC 8 cut(s) 167, 404, 539, 561, 1207, 1365, 1968, 2006
BpiI GAAGAC 2 cut(s) 576, 1955
BplI GAGNNNNNCTC 2 cut(s) 1555, 1587
BpmI CTGGAG 1 cut(s) 935
Bpu10I CCTNAGC 1 cut(s) 1146
Bpu14I TTCGAA 2 cut(s) 33, 1658
BpuEI CTTGAG 2 cut(s) 38, 1466
BsaBI GATNNNNATC 1 cut(s) 630
BsaHI GRCGYC 1 cut(s) 1678
BsaI GGTCTC 1 cut(s) 1738
BsaJI CCNNGG 6 cut(s) 23, 507, 1383, 1433, 1485, 1748
Bsc4I CCNNNNNNNGG 6 cut(s) 220, 720, 920, 1167, 1389, 1439
Bse1I ACTGG 4 cut(s) 767, 820, 1146, 1827
Bse3DI GCAATG 1 cut(s) 1008
Bse8I GATNNNNATC 1 cut(s) 630
BseBI CCWGG 2 cut(s) 186, 1385
BseDI CCNNGG 6 cut(s) 23, 507, 1383, 1433, 1485, 1748
BseGI GGATG 7 cut(s) 88, 209, 699, 1222, 1607, 2021, 2040
BseJI GATNNNNATC 1 cut(s) 630
BseLI CCNNNNNNNGG 6 cut(s) 220, 720, 920, 1167, 1389, 1439
BseMI GCAATG 1 cut(s) 1008
BseMII CTCAG 7 cut(s) 559, 759, 768, 1011, 1127, 1772, 1904
BseNI ACTGG 4 cut(s) 767, 820, 1146, 1827
BsePI GCGCGC 1 cut(s) 2099
BseRI GAGGAG 6 cut(s) 464, 548, 947, 1114, 1117, 1563
BseSI GKGCMC 1 cut(s) 1962
BseXI GCAGC 8 cut(s) 670, 2020, 2035, 2040, 2058, 2074, 2094, 2122
Bsh1236I CGCG 2 cut(s) 2101, 2103
BshFI GGCC 2 cut(s) 519, 1753
BsiHKAI GWGCWC 3 cut(s) 913, 1722, 1962
BsiHKCI CYCGRG 2 cut(s) 755, 1243
BslI CCNNNNNNNGG 6 cut(s) 220, 720, 920, 1167, 1389, 1439
BsmAI GTCTC 8 cut(s) 245, 773, 831, 929, 1132, 1222, 1381, 1738
BsmI GAATGC 2 cut(s) 599, 1358
BsnI GGCC 2 cut(s) 519, 1753
Bso31I GGTCTC 1 cut(s) 1738
BsoBI CYCGRG 2 cut(s) 755, 1243
Bsp119I TTCGAA 2 cut(s) 33, 1658
Bsp1286I GDGCHC 3 cut(s) 913, 1722, 1962
Bsp143I GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
Bsp19I CCATGG 1 cut(s) 1433
BspACI CCGC 3 cut(s) 642, 1754, 2103
BspANI GGCC 2 cut(s) 519, 1753
BspCNI CTCAG 7 cut(s) 558, 758, 769, 1012, 1128, 1773, 1905
BspFNI CGCG 2 cut(s) 2101, 2103
BspLI GGNNCC 2 cut(s) 818, 1394
BspMAI CTGCAG 2 cut(s) 2053, 2112
BspPI GGATC 3 cut(s) 960, 1503, 1746
BspT104I TTCGAA 2 cut(s) 33, 1658
BspTNI GGTCTC 1 cut(s) 1738
BsrDI GCAATG 1 cut(s) 1008
BsrI ACTGG 4 cut(s) 767, 820, 1146, 1827
BssECI CCNNGG 6 cut(s) 23, 507, 1383, 1433, 1485, 1748
BssHII GCGCGC 1 cut(s) 2099
BssMI GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
BssNI GRCGYC 1 cut(s) 1678
BssT1I CCWWGG 4 cut(s) 23, 507, 1433, 1485
Bst2UI CCWGG 2 cut(s) 186, 1385
Bst4CI ACNGT 3 cut(s) 784, 1076, 1730
Bst6I CTCTTC 7 cut(s) 118, 441, 885, 891, 1034, 1384, 1618
BstACI GRCGYC 1 cut(s) 1678
BstAPI GCANNNNNTGC 1 cut(s) 2071
BstBI TTCGAA 2 cut(s) 33, 1658
BstC8I GCNNGC 4 cut(s) 324, 2089, 2101, 2105
BstDEI CTNAG 9 cut(s) 545, 745, 777, 1020, 1063, 1136, 1146, 1781, 1913
BstDSI CCRYGG 1 cut(s) 1433
BstENI CCTNNNNNAGG 1 cut(s) 718
BstF5I GGATG 7 cut(s) 88, 209, 699, 1222, 1607, 2021, 2040
BstFNI CGCG 2 cut(s) 2101, 2103
BstH2I RGCGCY 1 cut(s) 595
BstHHI GCGC 5 cut(s) 594, 2008, 2093, 2101, 2103
BstKTI GATC 6 cut(s) 196, 529, 968, 1511, 1741, 1912
BstMAI GTCTC 8 cut(s) 245, 773, 831, 929, 1132, 1222, 1381, 1738
BstMBI GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
BstMWI GCNNNNNNNGC 7 cut(s) 725, 746, 2025, 2068, 2071, 2107, 2116
BstNI CCWGG 2 cut(s) 186, 1385
BstNSI RCATGY 1 cut(s) 1124
BstSCI CCNGG 2 cut(s) 184, 1383
BstSFI CTRYAG 2 cut(s) 2049, 2108
BstSLI GKGCMC 1 cut(s) 1962
BstUI CGCG 2 cut(s) 2101, 2103
BstV1I GCAGC 8 cut(s) 670, 2020, 2035, 2040, 2058, 2074, 2094, 2122
BstV2I GAAGAC 2 cut(s) 576, 1955
BstX2I RGATCY 3 cut(s) 526, 965, 1508
BstYI RGATCY 3 cut(s) 526, 965, 1508
BsuRI GGCC 2 cut(s) 519, 1753
BtgI CCRYGG 1 cut(s) 1433
BtsCI GGATG 7 cut(s) 88, 209, 699, 1222, 1607, 2021, 2040
BtsI GCAGTG 1 cut(s) 1988
BtsIMutI CAGTG 5 cut(s) 562, 774, 1735, 1834, 1988
Cac8I GCNNGC 4 cut(s) 324, 2089, 2101, 2105
CaiI CAGNNNCTG 2 cut(s) 1715, 2071
CfoI GCGC 5 cut(s) 594, 2008, 2093, 2101, 2103
Cfr13I GGNCC 1 cut(s) 817
CseI GACGC 1 cut(s) 1686
CspCI CAANNNNNGTGG 2 cut(s) 417, 452
CviAII CATG 8 cut(s) 79, 805, 959, 1096, 1121, 1126, 1424, 1434
DdeI CTNAG 9 cut(s) 545, 745, 777, 1020, 1063, 1136, 1146, 1781, 1913
DpnI GATC 6 cut(s) 195, 528, 967, 1510, 1740, 1911
DpnII GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
DraIII CACNNNGTG 1 cut(s) 793
DriI GACNNNNNGTC 1 cut(s) 1682
EaeI YGGCCR 1 cut(s) 517
Eam1104I CTCTTC 7 cut(s) 118, 441, 885, 891, 1034, 1384, 1618
Eam1105I GACNNNNNGTC 1 cut(s) 1682
EarI CTCTTC 7 cut(s) 118, 441, 885, 891, 1034, 1384, 1618
Eco130I CCWWGG 4 cut(s) 23, 507, 1433, 1485
Eco31I GGTCTC 1 cut(s) 1738
Eco47I GGWCC 1 cut(s) 817
Eco57I CTGAAG 3 cut(s) 369, 411, 522
Eco88I CYCGRG 2 cut(s) 755, 1243
EcoNI CCTNNNNNAGG 1 cut(s) 718
EcoRI GAATTC 2 cut(s) 385, 1058
EcoRII CCWGG 2 cut(s) 184, 1383
EcoT14I CCWWGG 4 cut(s) 23, 507, 1433, 1485
EcoT22I ATGCAT 2 cut(s) 554, 1358
ErhI CCWWGG 4 cut(s) 23, 507, 1433, 1485
FaeI CATG 8 cut(s) 82, 808, 962, 1099, 1124, 1129, 1427, 1437
FatI CATG 8 cut(s) 78, 804, 958, 1095, 1120, 1125, 1423, 1433
FauI CCCGC 1 cut(s) 2096
FokI GGATG 7 cut(s) 95, 196, 686, 1229, 1594, 2028, 2047
FspBI CTAG 8 cut(s) 441, 530, 720, 963, 1274, 1328, 1926, 2125
FspI TGCGCA 1 cut(s) 2007
GlaI GCGC 5 cut(s) 593, 2007, 2092, 2100, 2102
GsuI CTGGAG 1 cut(s) 935
HaeII RGCGCY 1 cut(s) 595
HaeIII GGCC 2 cut(s) 519, 1753
HgaI GACGC 1 cut(s) 1686
HhaI GCGC 5 cut(s) 594, 2008, 2093, 2101, 2103
Hin1I GRCGYC 1 cut(s) 1678
Hin1II CATG 8 cut(s) 82, 808, 962, 1099, 1124, 1129, 1427, 1437
Hin6I GCGC 5 cut(s) 592, 2006, 2091, 2099, 2101
HinP1I GCGC 5 cut(s) 592, 2006, 2091, 2099, 2101
HindIII AAGCTT 2 cut(s) 324, 492
HphI GGTGA 4 cut(s) 200, 417, 1220, 1357
Hpy166II GTNNAC 4 cut(s) 787, 1404, 1733, 1960
Hpy188III TCNNGA 5 cut(s) 17, 460, 530, 952, 1522
Hpy8I GTNNAC 4 cut(s) 787, 1404, 1733, 1960
Hpy99I CGWCG 1 cut(s) 1680
HpyCH4III ACNGT 3 cut(s) 784, 1076, 1730
HpyCH4IV ACGT 1 cut(s) 1930
HpyF10VI GCNNNNNNNGC 7 cut(s) 725, 746, 2025, 2068, 2071, 2107, 2116
HpyF3I CTNAG 9 cut(s) 545, 745, 777, 1020, 1063, 1136, 1146, 1781, 1913
HpySE526I ACGT 1 cut(s) 1930
Hsp92I GRCGYC 1 cut(s) 1678
Hsp92II CATG 8 cut(s) 82, 808, 962, 1099, 1124, 1129, 1427, 1437
HspAI GCGC 5 cut(s) 592, 2006, 2091, 2099, 2101
Kzo9I GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
LmnI GCTCC 4 cut(s) 916, 1717, 1725, 1796
Lsp1109I GCAGC 8 cut(s) 670, 2020, 2035, 2040, 2058, 2074, 2094, 2122
LweI GCATC 8 cut(s) 167, 404, 539, 561, 1207, 1365, 1968, 2006
MaeI CTAG 8 cut(s) 441, 530, 720, 963, 1274, 1328, 1926, 2125
MaeII ACGT 1 cut(s) 1930
MaeIII GTNAC 3 cut(s) 205, 871, 1015
MalI GATC 6 cut(s) 195, 528, 967, 1510, 1740, 1911
MboI GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
MfeI CAATTG 3 cut(s) 93, 467, 573
MflI RGATCY 3 cut(s) 526, 965, 1508
MhlI GDGCHC 3 cut(s) 913, 1722, 1962
MlsI TGGCCA 1 cut(s) 519
MluNI TGGCCA 1 cut(s) 519
MlyI GAGTC 8 cut(s) 41, 376, 401, 590, 1307, 1316, 1710, 1792
MmeI TCCRAC 4 cut(s) 1275, 1433, 1653, 1688
Mox20I TGGCCA 1 cut(s) 519
Mph1103I ATGCAT 2 cut(s) 554, 1358
MroXI GAANNNNTTC 1 cut(s) 1058
MscI TGGCCA 1 cut(s) 519
MseI TTAA 7 cut(s) 690, 977, 983, 1263, 1536, 1886, 1935
MslI CAYNNNNRTG 2 cut(s) 77, 1965
Msp20I TGGCCA 1 cut(s) 519
MspR9I CCNGG 2 cut(s) 186, 1385
MunI CAATTG 3 cut(s) 93, 467, 573
Mva1269I GAATGC 2 cut(s) 599, 1358
MvaI CCWGG 2 cut(s) 186, 1385
MvnI CGCG 2 cut(s) 2101, 2103
MwoI GCNNNNNNNGC 7 cut(s) 725, 746, 2025, 2068, 2071, 2107, 2116
NcoI CCATGG 1 cut(s) 1433
NdeII GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
NlaIII CATG 8 cut(s) 82, 808, 962, 1099, 1124, 1129, 1427, 1437
NlaIV GGNNCC 2 cut(s) 818, 1394
NmeAIII GCCGAG 1 cut(s) 2100
NmuCI GTSAC 2 cut(s) 205, 871
NsbI TGCGCA 1 cut(s) 2007
NsiI ATGCAT 2 cut(s) 554, 1358
NspI RCATGY 1 cut(s) 1124
NspV TTCGAA 2 cut(s) 33, 1658
PaeR7I CTCGAG 2 cut(s) 755, 1243
PauI GCGCGC 1 cut(s) 2099
PctI GAATGC 2 cut(s) 599, 1358
PdmI GAANNNNTTC 1 cut(s) 1058
PfeI GAWTC 8 cut(s) 5, 199, 456, 662, 763, 855, 1518, 1660
PleI GAGTC 8 cut(s) 41, 375, 401, 589, 1306, 1315, 1709, 1791
PpsI GAGTC 8 cut(s) 41, 375, 401, 589, 1306, 1315, 1709, 1791
PsiI TTATAA 1 cut(s) 1199
Psp6I CCWGG 2 cut(s) 184, 1383
PspGI CCWGG 2 cut(s) 184, 1383
PspN4I GGNNCC 2 cut(s) 818, 1394
PspPI GGNCC 1 cut(s) 817
PspXI VCTCGAGB 2 cut(s) 755, 1243
PstI CTGCAG 2 cut(s) 2053, 2112
PstNI CAGNNNCTG 2 cut(s) 1715, 2071
PsuI RGATCY 3 cut(s) 526, 965, 1508
PteI GCGCGC 1 cut(s) 2099
RseI CAYNNNNRTG 2 cut(s) 77, 1965
SaqAI TTAA 7 cut(s) 690, 977, 983, 1263, 1536, 1886, 1935
Sau3AI GATC 6 cut(s) 193, 526, 965, 1508, 1738, 1909
Sau96I GGNCC 1 cut(s) 817
SchI GAGTC 8 cut(s) 41, 376, 401, 590, 1307, 1316, 1710, 1792
ScrFI CCNGG 2 cut(s) 186, 1385
SduI GDGCHC 3 cut(s) 913, 1722, 1962
SfaNI GCATC 8 cut(s) 167, 404, 539, 561, 1207, 1365, 1968, 2006
SfcI CTRYAG 2 cut(s) 2049, 2108
Sfr274I CTCGAG 2 cut(s) 755, 1243
SfuI TTCGAA 2 cut(s) 33, 1658
SinI GGWCC 1 cut(s) 817
SlaI CTCGAG 2 cut(s) 755, 1243
SmiMI CAYNNNNRTG 2 cut(s) 77, 1965
SmlI CTYRAG 4 cut(s) 17, 755, 1243, 1445
SmoI CTYRAG 4 cut(s) 17, 755, 1243, 1445
SsiI CCGC 3 cut(s) 642, 1754, 2103
SspI AATATT 1 cut(s) 341
SspMI CTAG 8 cut(s) 441, 530, 720, 963, 1274, 1328, 1926, 2125
StyD4I CCNGG 2 cut(s) 184, 1383
StyI CCWWGG 4 cut(s) 23, 507, 1433, 1485
TaaI ACNGT 3 cut(s) 784, 1076, 1730
TaiI ACGT 1 cut(s) 1933
TaqII GACCGA 1 cut(s) 1762
TauI GCSGC 2 cut(s) 645, 1756
TfiI GAWTC 8 cut(s) 5, 199, 456, 662, 763, 855, 1518, 1660
Tru1I TTAA 7 cut(s) 690, 977, 983, 1263, 1536, 1886, 1935
Tru9I TTAA 7 cut(s) 690, 977, 983, 1263, 1536, 1886, 1935
TscAI CASTG 5 cut(s) 562, 774, 1735, 1834, 1988
TseFI GTSAC 2 cut(s) 205, 871
TseI GCWGC 8 cut(s) 683, 2008, 2028, 2048, 2062, 2071, 2107, 2110
Tsp45I GTSAC 2 cut(s) 205, 871
TspRI CASTG 5 cut(s) 562, 774, 1735, 1834, 1988
VneI GTGCAC 1 cut(s) 1958
VpaK11BI GGWCC 1 cut(s) 817
XagI CCTNNNNNAGG 1 cut(s) 718
XapI RAATTY 9 cut(s) 37, 144, 373, 385, 673, 706, 1058, 1312, 1471
XbaI TCTAGA 1 cut(s) 529
XceI RCATGY 1 cut(s) 1124
XcmI CCANNNNNNNNNTGG 1 cut(s) 1492
XhoI CTCGAG 2 cut(s) 755, 1243
XmnI GAANNNNTTC 1 cut(s) 1058
XspI CTAG 8 cut(s) 441, 530, 720, 963, 1274, 1328, 1926, 2125
Zsp2I ATGCAT 2 cut(s) 554, 1358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.