Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003536

Physical Location & Seq

Genomic Coordinates Reverse (-)

1033422 .. 1036994

Gene Structure 3573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0011600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGAACTCTCTGCTAAACCCCCAGACGCCGTTCGACTCCTCCGCCCACGACGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCCTCCTGCTCCTCCTGGGCCGACGAAACCCCTACGGCGCCGCCGTCCGCCGGTAACAGCGACAACAATGTCGTCTTCTCTTACGACGACTCTTCCAACCTCGCCTCCAAGTTCCGCAGCCACCAGATCAGCGCCGGCGCCGCAGCGTCCAAGTCCTCCCCCACTGCCTCGGCCGCAGCCGCCGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCCGTGGCGGCTCCTCCTCCTCCGGCAACGGCGCTCCGATGGGGTTGTCGTTGGGGAGCAACGGTGACTTCAACGATGTTGGTGACGGCTCGTCGTTTAAATCTCCTAATCCGGGCGGTGGTGACGGTGGTTCTTCTGTTCAGGCCTTGTTTAATGGCTTTACTGGATCTCTGTCTCCGAACCAGCCTCAGCATTTTCATCACCCTCAGGGGGGTGCACTTCAAGCGCAGAACTATGGAGCTCAAGCCGCAGCCATGACCCAACCTCCGGCGAACGGCTCGGCCGGAGCTTCGGCTGCGCAACCCAGGCCCAGAGTCAGGGCCAGGCGAGGTCAAGCCACTGACCCACACTCCATCGCTGAAAGATTACGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAGGAGCTGGTTCCCAATGCCAACAAGACAGATAAGGCTTCAATGCTAGATGAGATCATCGATTATGTAAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGTGGTGCTGGTGCTGTTGCTCCCCTTGTCACTGAGTCCTCTGAGGGAGGCGGTGACTGTATCCAGACCAGTGCCAATGGCGGGACCCGCGGCGGCCGGAGCGGCAACCAAACGGCGTCGTCCAACGACAGCATGACGGTGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTACAGGGCAAAGGTCTCTGCCTCATGCCTATCTCCTTGGCCACAGCTATCTCCACCGCCACGTGTCACCCCCGGAACCCACTGATGAATGGCAACAGCAACAATAACCACCCGGTCATTACATCCAACGGCGGAGAGGGGCCGTCGTCTCCCAGCATGTCAGCGTTGACCGATTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0016020 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00280 ko00410 ko00640 ko01100 ko01200 map00280 map00410 map00640 map01100 map01200

Pfam Domains

Protein Families

ECH_2

Protein Analysis

399

Amino Acids

41.1

Weight (kDa)

5.91

Isoelectric Point (pI)

46.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	218 - 263	6.7e-10	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	222 - 266	1.8e-06	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003536)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24360 AT3G24360 AT3G24360 AT3G24360 AT3G24360 AT3G24360 AT4G13360
fragaria_vesca	FvH4_1g05350 FvH4_1g05350 FvH4_1g05350 FvH4_1g05350 FvH4_1g05350 FvH4_1g05350
malus_domestica	MD02G1052700.v1.1 MD02G1056500.v1.1 MD15G1189500.v1.1
prunus_persica	Prupe.7G227300_v2.0.a1
pyrus_communis	pycom02g04570 pycom15g16990
rosa_chinensis	RchiOBHm_Chr2g0091031 RchiOBHm_Chr2g0092761 RchiOBHm_Chr2g0092831
rosa_laevigata	RLG00000016169
rosa_multiflora	Rmu_sc0003305.1_g000013
rosa_roxburghii	Rroxscaffold_2G00148870 Rroxscaffold_2G00150670
rosa_rugosa	Rorug02G0011500 Rorug02G0011500 Rorug02G0011600 Rorug02G0029300
rosa_samantha	Rh2AG058000 Rh2BG056300 Rh2CG058600 Rh2DG057800
rosa_wichuraiana	Rw2G005120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	155
Acc16I	TGCGCA	1 cut(s)	603
Acc36I	ACCTGC	1 cut(s)	807
AccB1I	GGYRCC	2 cut(s)	124, 224
AccBSI	CCGCTC	1 cut(s)	924
AccII	CGCG	1 cut(s)	912
AclWI	GGATC	1 cut(s)	478
AcoI	YGGCCR	5 cut(s)	258, 585, 916, 978, 1059
AcvI	CACGTG	1 cut(s)	1083
AcyI	GRCGYC	4 cut(s)	26, 125, 225, 938
AdeI	CACNNNGTG	1 cut(s)	976
AfaI	GTAC	1 cut(s)	1019
AflIII	ACRYGT	1 cut(s)	1082
AgsI	TTSAA	3 cut(s)	376, 527, 750
AhdI	GACNNNNNGTC	1 cut(s)	394
AjnI	CCWGG	4 cut(s)	101, 608, 626, 972
AjuI	GAANNNNNNNTTGG	2 cut(s)	786, 818
AluBI	AGCT	7 cut(s)	295, 545, 593, 715, 790, 985, 1067
AluI	AGCT	7 cut(s)	295, 545, 593, 715, 790, 985, 1067
Alw21I	GWGCWC	3 cut(s)	523, 547, 972
Alw26I	GTCTC	3 cut(s)	483, 1040, 1173
Alw44I	GTGCAC	1 cut(s)	519
AlwI	GGATC	1 cut(s)	478
AlwNI	CAGNNNCTG	1 cut(s)	715
Ama87I	CYCGRG	1 cut(s)	59
ApaLI	GTGCAC	1 cut(s)	519
ApeKI	GCWGC	6 cut(s)	204, 230, 263, 554, 599, 787
AspLEI	GCGC	6 cut(s)	127, 221, 227, 338, 532, 604
AspS9I	GGNCC	6 cut(s)	83, 105, 612, 624, 906, 1160
AsuC2I	CCSGG	3 cut(s)	417, 1093, 1133
AsuHPI	GGTGA	7 cut(s)	380, 398, 437, 497, 887, 973, 1079
AvaI	CYCGRG	1 cut(s)	59
AvaII	GGWCC	1 cut(s)	906
AxyI	CCTNAGG	1 cut(s)	510
BaeGI	GKGCMC	1 cut(s)	523
BalI	TGGCCA	2 cut(s)	980, 1061
BanI	GGYRCC	2 cut(s)	124, 224
BanII	GRGCYC	2 cut(s)	547, 1007
BbrPI	CACGTG	1 cut(s)	1083
BbsI	GAAGAC	1 cut(s)	154
Bbv12I	GWGCWC	3 cut(s)	523, 547, 972
BbvCI	CCTCAGC	1 cut(s)	492
BbvI	GCAGC	6 cut(s)	216, 242, 275, 566, 586, 799
BccI	CCATC	2 cut(s)	337, 665
BceAI	ACGGC	9 cut(s)	13, 115, 138, 349, 406, 595, 951, 1147, 1165
BciT130I	CCWGG	4 cut(s)	103, 610, 628, 974
BciVI	GTATCC	1 cut(s)	893
BcnI	CCSGG	3 cut(s)	417, 1093, 1133
BcoDI	GTCTC	3 cut(s)	483, 1040, 1173
BfaI	CTAG	1 cut(s)	755
BfmI	CTRYAG	3 cut(s)	707, 785, 1022
BfoI	RGCGCY	4 cut(s)	128, 222, 228, 339
BfuAI	ACCTGC	1 cut(s)	807
BfuI	GTATCC	1 cut(s)	893
BglI	GCCNNNNNGGC	1 cut(s)	924
Bme1390I	CCNGG	7 cut(s)	103, 417, 610, 628, 974, 1093, 1133
Bme18I	GGWCC	1 cut(s)	906
BmeRI	GACNNNNNGTC	1 cut(s)	394
BmeT110I	CYCGRG	1 cut(s)	59
BmgT120I	GGNCC	6 cut(s)	83, 105, 612, 624, 906, 1160
BmrFI	CCNGG	7 cut(s)	103, 417, 610, 628, 974, 1093, 1133
BmsI	GCATC	1 cut(s)	270
BpiI	GAAGAC	1 cut(s)	154
BpmI	CTGGAG	1 cut(s)	269
Bpu10I	CCTNAGC	1 cut(s)	492
BpuEI	CTTGAG	1 cut(s)	531
BpuMI	CCSGG	3 cut(s)	417, 1093, 1133
Bsa29I	ATCGAT	1 cut(s)	768
BsaAI	YACGTR	1 cut(s)	1083
BsaHI	GRCGYC	4 cut(s)	26, 125, 225, 938
BsaI	GGTCTC	1 cut(s)	1040
BsaJI	CCNNGG	8 cut(s)	79, 102, 255, 307, 608, 910, 1056, 1091
Bse118I	RCCGGY	2 cut(s)	137, 221
Bse1I	ACTGG	2 cut(s)	472, 891
Bse21I	CCTNAGG	1 cut(s)	510
BseBI	CCWGG	4 cut(s)	103, 610, 628, 974
BseCI	ATCGAT	1 cut(s)	768
BseDI	CCNNGG	8 cut(s)	79, 102, 255, 307, 608, 910, 1056, 1091
BseGI	GGATG	1 cut(s)	1142
BseMII	CTCAG	5 cut(s)	506, 524, 797, 846, 855
BseNI	ACTGG	2 cut(s)	472, 891
BseRI	GAGGAG	7 cut(s)	28, 79, 88, 307, 310, 313, 1007
BseSI	GKGCMC	1 cut(s)	523
BseX3I	CGGCCG	3 cut(s)	258, 585, 916
BseXI	GCAGC	6 cut(s)	216, 242, 275, 566, 586, 799
BseYI	CCCAGC	1 cut(s)	1172
Bsh1236I	CGCG	1 cut(s)	912
Bsh1285I	CGRYCG	3 cut(s)	261, 588, 919
BshNI	GGYRCC	2 cut(s)	124, 224
BshVI	ATCGAT	1 cut(s)	768
BsiEI	CGRYCG	3 cut(s)	261, 588, 919
BsiHKAI	GWGCWC	3 cut(s)	523, 547, 972
BsiHKCI	CYCGRG	1 cut(s)	59
BsiSI	CCGG	9 cut(s)	138, 222, 327, 416, 572, 588, 919, 1093, 1133
BslFI	GGGAC	2 cut(s)	289, 919
BsmAI	GTCTC	3 cut(s)	483, 1040, 1173
BsmBI	CGTCTC	1 cut(s)	1173
BsmFI	GGGAC	2 cut(s)	289, 919
Bso31I	GGTCTC	1 cut(s)	1040
BsoBI	CYCGRG	1 cut(s)	59
Bsp1286I	GDGCHC	4 cut(s)	523, 547, 972, 1007
Bsp143I	GATC	3 cut(s)	213, 470, 762
BspCNI	CTCAG	5 cut(s)	505, 523, 798, 847, 856
BspDI	ATCGAT	1 cut(s)	768
BspFNI	CGCG	1 cut(s)	912
BspHI	TCATGA	1 cut(s)	297
BspMAI	CTGCAG	2 cut(s)	711, 789
BspMI	ACCTGC	1 cut(s)	807
BspPI	GGATC	1 cut(s)	478
BspT107I	GGYRCC	2 cut(s)	124, 224
BspTNI	GGTCTC	1 cut(s)	1040
BsrBI	CCGCTC	1 cut(s)	924
BsrFI	RCCGGY	2 cut(s)	137, 221
BsrI	ACTGG	2 cut(s)	472, 891
BssAI	RCCGGY	2 cut(s)	137, 221
BssECI	CCNNGG	8 cut(s)	79, 102, 255, 307, 608, 910, 1056, 1091
BssMI	GATC	3 cut(s)	213, 470, 762
BssNI	GRCGYC	4 cut(s)	26, 125, 225, 938
BssT1I	CCWWGG	1 cut(s)	1056
Bst2UI	CCWGG	4 cut(s)	103, 610, 628, 974
Bst4CI	ACNGT	4 cut(s)	368, 431, 881, 961
Bst6I	CTCTTC	2 cut(s)	184, 670
BstACI	GRCGYC	4 cut(s)	26, 125, 225, 938
BstBAI	YACGTR	1 cut(s)	1083
BstC8I	GCNNGC	1 cut(s)	223
BstDEI	CTNAG	5 cut(s)	492, 510, 806, 855, 864
BstDSI	CCRYGG	2 cut(s)	307, 910
BstF5I	GGATG	1 cut(s)	1142
BstFNI	CGCG	1 cut(s)	912
BstH2I	RGCGCY	4 cut(s)	128, 222, 228, 339
BstHHI	GCGC	6 cut(s)	127, 221, 227, 338, 532, 604
BstKTI	GATC	3 cut(s)	216, 473, 765
BstMAI	GTCTC	3 cut(s)	483, 1040, 1173
BstMBI	GATC	3 cut(s)	213, 470, 762
BstMCI	CGRYCG	3 cut(s)	261, 588, 919
BstNI	CCWGG	4 cut(s)	103, 610, 628, 974
BstNSI	RCATGY	1 cut(s)	1180
BstSCI	CCNGG	7 cut(s)	101, 415, 608, 626, 972, 1091, 1131
BstSFI	CTRYAG	3 cut(s)	707, 785, 1022
BstSLI	GKGCMC	1 cut(s)	523
BstUI	CGCG	1 cut(s)	912
BstV1I	GCAGC	6 cut(s)	216, 242, 275, 566, 586, 799
BstV2I	GAAGAC	1 cut(s)	154
BstX2I	RGATCY	1 cut(s)	470
BstXI	CCANNNNNNTGG	1 cut(s)	988
BstYI	RGATCY	1 cut(s)	470
BstZI	CGGCCG	3 cut(s)	258, 585, 916
Bsu15I	ATCGAT	1 cut(s)	768
Bsu36I	CCTNAGG	1 cut(s)	510
BsuI	GTATCC	1 cut(s)	893
BsuTUI	ATCGAT	1 cut(s)	768
BtgI	CCRYGG	2 cut(s)	307, 910
BtgZI	GCGATG	1 cut(s)	643
BtsCI	GGATG	1 cut(s)	1142
BtsI	GCAGTG	1 cut(s)	249
BtsIMutI	CAGTG	5 cut(s)	249, 642, 852, 898, 1100
BveI	ACCTGC	1 cut(s)	807
Cac8I	GCNNGC	1 cut(s)	223
CaiI	CAGNNNCTG	1 cut(s)	715
CciI	TCATGA	1 cut(s)	297
CfoI	GCGC	6 cut(s)	127, 221, 227, 338, 532, 604
Cfr10I	RCCGGY	2 cut(s)	137, 221
Cfr13I	GGNCC	6 cut(s)	83, 105, 612, 624, 906, 1160
Cfr42I	CCGCGG	1 cut(s)	913
ClaI	ATCGAT	1 cut(s)	768
CseI	GACGC	3 cut(s)	34, 222, 927
CsiI	ACCWGGT	1 cut(s)	972
Csp6I	GTAC	1 cut(s)	1018
CviQI	GTAC	1 cut(s)	1018
DdeI	CTNAG	5 cut(s)	492, 510, 806, 855, 864
DinI	GGCGCC	2 cut(s)	126, 226
DpnI	GATC	3 cut(s)	215, 472, 764
DpnII	GATC	3 cut(s)	213, 470, 762
DraI	TTTAAA	1 cut(s)	403
DraIII	CACNNNGTG	1 cut(s)	976
DrdI	GACNNNNNNGTC	1 cut(s)	155
DriI	GACNNNNNGTC	1 cut(s)	394
DseDI	GACNNNNNNGTC	1 cut(s)	155
EaeI	YGGCCR	5 cut(s)	258, 585, 916, 978, 1059
EagI	CGGCCG	3 cut(s)	258, 585, 916
Eam1104I	CTCTTC	2 cut(s)	184, 670
Eam1105I	GACNNNNNGTC	1 cut(s)	394
EarI	CTCTTC	2 cut(s)	184, 670
EciI	GGCGGA	4 cut(s)	31, 124, 997, 1167
Ecl136II	GAGCTC	1 cut(s)	545
EclXI	CGGCCG	3 cut(s)	258, 585, 916
Eco130I	CCWWGG	1 cut(s)	1056
Eco147I	AGGCCT	1 cut(s)	449
Eco24I	GRGCYC	2 cut(s)	547, 1007
Eco31I	GGTCTC	1 cut(s)	1040
Eco47I	GGWCC	1 cut(s)	906
Eco52I	CGGCCG	3 cut(s)	258, 585, 916
Eco53kI	GAGCTC	1 cut(s)	545
Eco72I	CACGTG	1 cut(s)	1083
Eco81I	CCTNAGG	1 cut(s)	510
Eco88I	CYCGRG	1 cut(s)	59
EcoICRI	GAGCTC	1 cut(s)	545
EcoO109I	RGGNCCY	1 cut(s)	906
EcoRII	CCWGG	4 cut(s)	101, 608, 626, 972
EcoT14I	CCWWGG	1 cut(s)	1056
EcoT38I	GRGCYC	2 cut(s)	547, 1007
EgeI	GGCGCC	2 cut(s)	126, 226
EheI	GGCGCC	2 cut(s)	126, 226
ErhI	CCWWGG	1 cut(s)	1056
Esp3I	CGTCTC	1 cut(s)	1173
FaqI	GGGAC	2 cut(s)	289, 919
FauI	CCCGC	2 cut(s)	896, 917
FokI	GGATG	1 cut(s)	1129
FriOI	GRGCYC	2 cut(s)	547, 1007
FspBI	CTAG	1 cut(s)	755
FspI	TGCGCA	1 cut(s)	603
GlaI	GCGC	6 cut(s)	126, 220, 226, 337, 531, 603
GsaI	CCCAGC	1 cut(s)	1176
GsuI	CTGGAG	1 cut(s)	269
HaeII	RGCGCY	4 cut(s)	128, 222, 228, 339
HapII	CCGG	9 cut(s)	138, 222, 327, 416, 572, 588, 919, 1093, 1133
HgaI	GACGC	3 cut(s)	34, 222, 927
HhaI	GCGC	6 cut(s)	127, 221, 227, 338, 532, 604
Hin1I	GRCGYC	4 cut(s)	26, 125, 225, 938
Hin6I	GCGC	6 cut(s)	125, 219, 225, 336, 530, 602
HinP1I	GCGC	6 cut(s)	125, 219, 225, 336, 530, 602
HincII	GTYRAC	1 cut(s)	1188
HindII	GTYRAC	1 cut(s)	1188
HinfI	GANTC	4 cut(s)	35, 176, 618, 857
HpaII	CCGG	9 cut(s)	138, 222, 327, 416, 572, 588, 919, 1093, 1133
HphI	GGTGA	7 cut(s)	380, 398, 437, 497, 887, 973, 1079
Hpy166II	GTNNAC	2 cut(s)	521, 1188
Hpy188I	TCNGA	4 cut(s)	342, 483, 807, 865
Hpy188III	TCNNGA	2 cut(s)	298, 886
Hpy8I	GTNNAC	2 cut(s)	521, 1188
Hpy99I	CGWCG	6 cut(s)	53, 113, 176, 400, 943, 1168
HpyCH4III	ACNGT	4 cut(s)	368, 431, 881, 961
HpyCH4IV	ACGT	1 cut(s)	1082
HpyCH4V	TGCA	5 cut(s)	521, 689, 709, 787, 1015
HpyF3I	CTNAG	5 cut(s)	492, 510, 806, 855, 864
HpySE526I	ACGT	1 cut(s)	1082
Hsp92I	GRCGYC	4 cut(s)	26, 125, 225, 938
HspAI	GCGC	6 cut(s)	125, 219, 225, 336, 530, 602
KasI	GGCGCC	2 cut(s)	124, 224
KflI	GGGWCCC	1 cut(s)	906
KroI	GCCGGC	1 cut(s)	221
KroNI	GCCGGC	1 cut(s)	223
KspI	CCGCGG	1 cut(s)	913
Kzo9I	GATC	3 cut(s)	213, 470, 762
Lsp1109I	GCAGC	6 cut(s)	216, 242, 275, 566, 586, 799
LweI	GCATC	1 cut(s)	270
MabI	ACCWGGT	1 cut(s)	972
MaeI	CTAG	1 cut(s)	755
MaeII	ACGT	1 cut(s)	1082
MaeIII	GTNAC	8 cut(s)	140, 368, 386, 425, 850, 875, 961, 1085
MalI	GATC	3 cut(s)	215, 472, 764
MbiI	CCGCTC	1 cut(s)	924
MboI	GATC	3 cut(s)	213, 470, 762
MboII	GAAGA	4 cut(s)	154, 171, 429, 687
MflI	RGATCY	1 cut(s)	470
MhlI	GDGCHC	4 cut(s)	523, 547, 972, 1007
MlsI	TGGCCA	2 cut(s)	980, 1061
MluCI	AATT	1 cut(s)	684
MluNI	TGGCCA	2 cut(s)	980, 1061
Mly113I	GGCGCC	2 cut(s)	125, 225
MlyI	GAGTC	4 cut(s)	29, 170, 627, 866
MmeI	TCCRAC	3 cut(s)	207, 969, 1170
Mox20I	TGGCCA	2 cut(s)	980, 1061
MreI	CGCCGGCG	1 cut(s)	221
MroNI	GCCGGC	1 cut(s)	221
MscI	TGGCCA	2 cut(s)	980, 1061
MseI	TTAA	2 cut(s)	402, 456
MslI	CAYNNNNRTG	1 cut(s)	959
Msp20I	TGGCCA	2 cut(s)	980, 1061
MspA1I	CMGCKG	1 cut(s)	912
MspI	CCGG	9 cut(s)	138, 222, 327, 416, 572, 588, 919, 1093, 1133
MspR9I	CCNGG	7 cut(s)	103, 417, 610, 628, 974, 1093, 1133
MvaI	CCWGG	4 cut(s)	103, 610, 628, 974
MvnI	CGCG	1 cut(s)	912
NaeI	GCCGGC	1 cut(s)	223
NarI	GGCGCC	2 cut(s)	125, 225
NciI	CCSGG	3 cut(s)	417, 1093, 1133
NdeII	GATC	3 cut(s)	213, 470, 762
NgoMIV	GCCGGC	1 cut(s)	221
NmeAIII	GCCGAG	3 cut(s)	60, 236, 563
NmuCI	GTSAC	7 cut(s)	368, 386, 425, 850, 875, 961, 1085
NsbI	TGCGCA	1 cut(s)	603
NspI	RCATGY	1 cut(s)	1180
PaeR7I	CTCGAG	1 cut(s)	59
PagI	TCATGA	1 cut(s)	297
PceI	AGGCCT	1 cut(s)	449
PcsI	WCGNNNNNNNCGW	2 cut(s)	57, 128
PdiI	GCCGGC	1 cut(s)	223
PleI	GAGTC	4 cut(s)	29, 170, 626, 865
PluTI	GGCGCC	2 cut(s)	128, 228
PmaCI	CACGTG	1 cut(s)	1083
PmlI	CACGTG	1 cut(s)	1083
PpsI	GAGTC	4 cut(s)	29, 170, 626, 865
Ppu21I	YACGTR	1 cut(s)	1083
PpuMI	RGGWCCY	1 cut(s)	906
Psp124BI	GAGCTC	1 cut(s)	547
Psp5II	RGGWCCY	1 cut(s)	906
Psp6I	CCWGG	4 cut(s)	101, 608, 626, 972
PspCI	CACGTG	1 cut(s)	1083
PspFI	CCCAGC	1 cut(s)	1172
PspGI	CCWGG	4 cut(s)	101, 608, 626, 972
PspPI	GGNCC	6 cut(s)	83, 105, 612, 624, 906, 1160
PspPPI	RGGWCCY	1 cut(s)	906
PspXI	VCTCGAGB	1 cut(s)	59
PstI	CTGCAG	2 cut(s)	711, 789
PstNI	CAGNNNCTG	1 cut(s)	715
PsuI	RGATCY	1 cut(s)	470
RsaI	GTAC	1 cut(s)	1019
RsaNI	GTAC	1 cut(s)	1018
RseI	CAYNNNNRTG	1 cut(s)	959
SacI	GAGCTC	1 cut(s)	547
SacII	CCGCGG	1 cut(s)	913
SaqAI	TTAA	2 cut(s)	402, 456
Sau3AI	GATC	3 cut(s)	213, 470, 762
Sau96I	GGNCC	6 cut(s)	83, 105, 612, 624, 906, 1160
SbfI	CCTGCAGG	1 cut(s)	711
SchI	GAGTC	4 cut(s)	29, 170, 627, 866
ScrFI	CCNGG	7 cut(s)	103, 417, 610, 628, 974, 1093, 1133
SdaI	CCTGCAGG	1 cut(s)	711
SduI	GDGCHC	4 cut(s)	523, 547, 972, 1007
SexAI	ACCWGGT	1 cut(s)	972
SfaNI	GCATC	1 cut(s)	270
SfcI	CTRYAG	3 cut(s)	707, 785, 1022
SfoI	GGCGCC	2 cut(s)	126, 226
Sfr274I	CTCGAG	1 cut(s)	59
Sfr303I	CCGCGG	1 cut(s)	913
SgrAI	CRCCGGYG	1 cut(s)	221
SgrBI	CCGCGG	1 cut(s)	913
SinI	GGWCC	1 cut(s)	906
SlaI	CTCGAG	1 cut(s)	59
SmiMI	CAYNNNNRTG	1 cut(s)	959
SmlI	CTYRAG	2 cut(s)	59, 546
SmoI	CTYRAG	2 cut(s)	59, 546
Sse8387I	CCTGCAGG	1 cut(s)	711
Sse9I	AATT	1 cut(s)	684
SseBI	AGGCCT	1 cut(s)	449
SspDI	GGCGCC	2 cut(s)	124, 224
SspMI	CTAG	1 cut(s)	755
SstI	GAGCTC	1 cut(s)	547
StuI	AGGCCT	1 cut(s)	449
StyD4I	CCNGG	7 cut(s)	101, 415, 608, 626, 972, 1091, 1131
StyI	CCWWGG	1 cut(s)	1056
TaaI	ACNGT	4 cut(s)	368, 431, 881, 961
TaiI	ACGT	1 cut(s)	1085
TaqI	TCGA	3 cut(s)	33, 60, 768
TasI	AATT	1 cut(s)	684
Tru1I	TTAA	2 cut(s)	402, 456
Tru9I	TTAA	2 cut(s)	402, 456
TscAI	CASTG	5 cut(s)	256, 649, 859, 898, 1107
TseFI	GTSAC	7 cut(s)	368, 386, 425, 850, 875, 961, 1085
TseI	GCWGC	6 cut(s)	204, 230, 263, 554, 599, 787
Tsp45I	GTSAC	7 cut(s)	368, 386, 425, 850, 875, 961, 1085
TspDTI	ATGAA	4 cut(s)	17, 491, 713, 1121
TspGWI	ACGGA	1 cut(s)	980
TspRI	CASTG	5 cut(s)	256, 649, 859, 898, 1107
VneI	GTGCAC	1 cut(s)	519
VpaK11BI	GGWCC	1 cut(s)	906
XceI	RCATGY	1 cut(s)	1180
XhoI	CTCGAG	1 cut(s)	59
XspI	CTAG	1 cut(s)	755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.