Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001910

Physical Location & Seq

Genomic Coordinates Reverse (-)

11564858 .. 11571089

Gene Structure 6232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0134200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGAAAGTGGTTTTCAGAAGAAGATGTTAGAAAATGGTGATGAGGGATATCAGTTTGGAGATTGTGAGGAGCTAAAACTAGGGATGGAGGTGTCTAGTGAAGCTGAAGCTTATGAGCTGTGCAACAACTATGCATATAAGAAAGGGTTTAGTATTCGTAAAGGGCACCTTCGAAAAGATGCGCAGAATAATCCCAGGCAGAGAGAGTTTTTGTGTTCGAAAGAAGGGTTTCTGCGAGATGAGGACTTGTGTGAAGTGAAAAAGGTGAGGAGGTTGGAGACGAGGACGGGGTGCAAGGCTGCATTTCGGTTCAATGTGGAAAATGGTGTGTGGAAGATCTCTTACACTCATCCGCATCATAATCATGAGTTTGCGAGTCCTGAAGAAAGAAAATTTCTGAGATCGGGTAGAAATATACCGAGTGTTCGTGCAGCTATCGTTGGTTATAAGGTTGATGAGAGTAGCACACCAGTGAAAGCATACCCAATCTTGGAAAAGGAATGTGGCAGTGCTGACAGTGTTGGGTTCACTCATAAAGATTATCATAGTCTTTTGCAAAGCAAGGAGGGAGAAATGATGGAAGCCAGGGATGTACAAAATTTGGTTAACTATTTTAAGCATAAACAGATTGAGGATCCGAACTTTTTCTATAGTGTGAAAGTCGATCAATTTAGTCGGATAACAGATTTCTTTTGGAGAGATGGTGGATCAAAGTTGGACTATGATTGCTTTGGAGATGTGGTCTGCTTTGACACTACATTTCAGACCAACAAATACAATCTTATTTGTGCTCCATTTGTCGGAGTTAATCATCATTGGAAGGACGTCTTATTTGGTTGTGCTTTTTTATTGGATAAGAGCGTCGACTCATGTATTTGGTTGTTTAAAACCTTTCTGGAGTCAATGGGACATAAACAACCTAAAACCATTTTCACAGATGAGGATACAGCAATCGCAAATGCACTTGCAAGTGTGCTTCCAGAGACACGCCACCGATTGTGCAGTTGGAACATCTCTAAGAATGCTACGCTACAGCTTGCTAGTCATTATGCTAATCCCGAGTTCAAGAAGCACGTCAACATATGCTTTCATGATTGTTTTACTGAAGATGAGTTTCAAGCTGCATGGGGTAACATGATTAAAGCATTCAGCCTTGAAAGTAACTCGTGGCTGAAGATGATGTATTCACTTAAAGAGAAATGGTGCCCTGCTTTTAGCTTAGATACTTTCTCTGCGAATATTGCATCCGGCCAGAGGGGTGAGAGCATGAACAATATTTTCCATCAAATATCTAGAACAAATGGGGATCTGATCAGTTTTGCACACCATTACGAGGAAAAAACCAAAGAGATGCGATTCAAAGAGTTGGAAGAGGATTTTCGTTGTAGAAATGCCACGCCTCGTCTCACAATAAATAGTGGTGTCTTTAAGCAAGCAGCTACTGAGTATACTGTTAGAATGTATTCATTTCTTGAAAATGAGCTCATGAGTATCTTTGGGGTGAGGATGACAGAAGTCGGTACTGATGGGAATGAGTGTATTTATGAAGCTACTGAAGAAGGTTATGAAAGAGTCTATAGAATTCGATTTCGATATGATTGTTTTACTGCTAGGGTTTCCTGTTCTTGTAAGTTATTTGAATCTATGGGAGTGTTGTGTCGTCATGCTCTAAAAGTATTGGATTTGAAAAACTTGACAAGCATACCAGCCCAGTACATAGCGAAGAGATGGACCAAAGGGGCGAAGAAGGGGATTGTGGTGAGTACTGATTTCTCCAAGTCACCATACAAAAAGGCAAAGTCTGCCCAATCGTCGCGCCTAAGTGCATTGATGCACGAAGGAACTAATGTTTTCAGTTTAGGCTCATTGTGTGATTCTGGAACTAGGATTGTCAAACAGAAGTTAGCAGAGACGATGCAGTTACTCGAAGGTGATGCAGAAACTACCGACATGGTTAGAAATTTGAGAAGAGCAGATGACTCATCTGTCTGTGCTGCGGTTCTGGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019538 GO:0019787 GO:0019789 GO:0022414 GO:0032446 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070647 GO:0071704 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03013 ko04064 ko04120 ko05206 map03013 map04064 map04120 map05206

Pfam Domains

Protein Families

UQ_con

Protein Analysis

670

Amino Acids

76.82

Weight (kDa)

6.85

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	42 - 124	2.5e-15	FAR1 DNA-binding domain
MULE	PF10551	247 - 341	1.7e-24	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57870
fragaria_vesca	FvH4_1g16390 FvH4_2g33980 FvH4_2g33980 FvH4_2g33980
malus_domestica	MD02G1176400.v1.1 MD08G1095700.v1.1 MD15G1078500.v1.1 MD15G1286800.v1.1
prunus_persica	Prupe.1G431700_v2.0.a1 Prupe.1G431700_v2.0.a1 Prupe.1G431700_v2.0.a1 Prupe.1G431700_v2.0.a1 Prupe.1G431700_v2.0.a1 Prupe.6G231300_v2.0.a1
pyrus_communis	pycom02g14260 pycom08g07770 pycom15g25010
rosa_chinensis	RchiOBHm_Chr2g0106261 RchiOBHm_Chr2g0167981 RchiOBHm_Chr5g0052931 RchiOBHm_Chr6g0308431
rosa_laevigata	RLG00000017484
rosa_multiflora	Rmu_co8313989.1_g000001 Rmu_co8449227.1_g000001 Rmu_sc0001047.1_g000006 Rmu_sc0008603.1_g000014 Rmu_sc0011796.1_g000003 Rmu_sc0029915.1_g000001
rosa_roxburghii	Rroxscaffold_2G00137320 Rroxscaffold_7G00160140
rosa_rugosa	Rorug02G0133900 Rorug02G0134000 Rorug02G0134100 Rorug02G0134200 Rorug06G0366700
rosa_samantha	Rh2AG185000 Rh2BG195300 Rh2CG190100 Rh2DG191200 Rh6AG476300 Rh6BG486500 Rh6CG491700 Rh6DG477800
rosa_wichuraiana	Rw2G014450 Rw6G041550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	447
AasI	GACNNNNNNGTC	1 cut(s)	1985
AatII	GACGTC	1 cut(s)	828
Acc16I	TGCGCA	1 cut(s)	183
AccB1I	GGYRCC	2 cut(s)	165, 1203
AccI	GTMKAC	2 cut(s)	864, 1448
AccII	CGCG	1 cut(s)	1816
AciI	CCGC	2 cut(s)	353, 1997
AclWI	GGATC	4 cut(s)	629, 642, 715, 1314
AcoI	YGGCCR	1 cut(s)	1249
AcsI	RAATTY	4 cut(s)	392, 598, 1581, 1960
AcuI	CTGAAG	5 cut(s)	126, 402, 1125, 1193, 1575
AcyI	GRCGYC	1 cut(s)	825
AfaI	GTAC	4 cut(s)	594, 1522, 1715, 1765
AfiI	CCNNNNNNNGG	4 cut(s)	490, 800, 1254, 1333
AgsI	TTSAA	8 cut(s)	313, 1066, 1118, 1157, 1360, 1475, 1640, 1687
AjiI	CACGTC	1 cut(s)	1075
AjnI	CCWGG	2 cut(s)	194, 584
AleI	CACNNNNGTG	1 cut(s)	470
Alw21I	GWGCWC	2 cut(s)	793, 1485
Alw26I	GTCTC	4 cut(s)	272, 977, 1409, 1904
AlwI	GGATC	4 cut(s)	629, 642, 715, 1314
AlwNI	CAGNNNCTG	1 cut(s)	1442
Ama87I	CYCGRG	1 cut(s)	1058
AoxI	GGCC	1 cut(s)	1249
ApeKI	GCWGC	5 cut(s)	299, 431, 1121, 1436, 1994
ApoI	RAATTY	4 cut(s)	392, 598, 1581, 1960
ArsI	GACNNNNNNTTYG	2 cut(s)	815, 847
Asp700I	GAANNNNTTC	3 cut(s)	228, 644, 1462
AspLEI	GCGC	2 cut(s)	184, 1818
AspS9I	GGNCC	1 cut(s)	1731
AsuHPI	GGTGA	7 cut(s)	50, 277, 1271, 1513, 1771, 1773, 1943
AsuII	TTCGAA	2 cut(s)	172, 218
AvaI	CYCGRG	1 cut(s)	1058
AvaII	GGWCC	1 cut(s)	1731
BaeGI	GKGCMC	2 cut(s)	168, 1208
BamHI	GGATCC	1 cut(s)	634
BanI	GGYRCC	2 cut(s)	165, 1203
BanII	GRGCYC	1 cut(s)	1485
BarI	GAAGNNNNNNTAC	2 cut(s)	326, 358
BauI	CACGAG	1 cut(s)	1165
Bbv12I	GWGCWC	2 cut(s)	793, 1485
BbvI	GCAGC	5 cut(s)	286, 443, 1108, 1448, 1981
BccI	CCATC	6 cut(s)	79, 571, 695, 1290, 1520, 1722
BcgI	CGANNNNNNTGC	2 cut(s)	1916, 1950
BciT130I	CCWGG	2 cut(s)	196, 586
BciVI	GTATCC	1 cut(s)	937
BclI	TGATCA	1 cut(s)	1311
BcoDI	GTCTC	4 cut(s)	272, 977, 1409, 1904
BfaI	CTAG	6 cut(s)	80, 96, 1041, 1293, 1611, 1884
BfmI	CTRYAG	3 cut(s)	649, 1031, 1576
BfuI	GTATCC	1 cut(s)	937
BglII	AGATCT	1 cut(s)	336
BisI	GCNGC	5 cut(s)	300, 432, 1122, 1437, 1995
BlsI	GCNGC	5 cut(s)	301, 433, 1123, 1438, 1996
BmcAI	AGTACT	1 cut(s)	1765
Bme1390I	CCNGG	2 cut(s)	196, 586
Bme18I	GGWCC	1 cut(s)	1731
BmeT110I	CYCGRG	1 cut(s)	1058
BmgBI	CACGTC	1 cut(s)	1075
BmgT120I	GGNCC	1 cut(s)	1731
BmiI	GGNNCC	3 cut(s)	167, 636, 1205
BmrFI	CCNGG	2 cut(s)	196, 586
BmrI	ACTGGG	1 cut(s)	1705
BmsI	GCATC	7 cut(s)	169, 364, 1253, 1341, 1821, 1905, 1924
BmuI	ACTGGG	1 cut(s)	1705
BoxI	GACNNNNGTC	1 cut(s)	1514
BpmI	CTGGAG	1 cut(s)	917
Bpu14I	TTCGAA	2 cut(s)	172, 218
BsaHI	GRCGYC	1 cut(s)	825
BsaJI	CCNNGG	2 cut(s)	194, 585
BsaXI	ACNNNNNCTCC	4 cut(s)	688, 718, 726, 756
Bsc4I	CCNNNNNNNGG	4 cut(s)	490, 800, 1254, 1333
Bse1I	ACTGG	2 cut(s)	470, 1711
BseBI	CCWGG	2 cut(s)	196, 586
BseDI	CCNNGG	2 cut(s)	194, 585
BseGI	GGATG	6 cut(s)	90, 349, 595, 1244, 1512, 2011
BseLI	CCNNNNNNNGG	4 cut(s)	490, 800, 1254, 1333
BseMII	CTCAG	2 cut(s)	389, 1434
BseNI	ACTGG	2 cut(s)	470, 1711
BseRI	GAGGAG	2 cut(s)	83, 283
BseSI	GKGCMC	2 cut(s)	168, 1208
BseXI	GCAGC	5 cut(s)	286, 443, 1108, 1448, 1981
BsgI	GTGCAG	2 cut(s)	450, 1021
Bsh1236I	CGCG	1 cut(s)	1816
BshFI	GGCC	1 cut(s)	1251
BshNI	GGYRCC	2 cut(s)	165, 1203
BsiHKAI	GWGCWC	2 cut(s)	793, 1485
BsiHKCI	CYCGRG	1 cut(s)	1058
BsiSI	CCGG	1 cut(s)	1248
BslFI	GGGAC	1 cut(s)	921
BslI	CCNNNNNNNGG	4 cut(s)	490, 800, 1254, 1333
BsmAI	GTCTC	4 cut(s)	272, 977, 1409, 1904
BsmBI	CGTCTC	3 cut(s)	272, 1409, 1904
BsmFI	GGGAC	1 cut(s)	921
BsmI	GAATGC	2 cut(s)	1027, 1145
BsnI	GGCC	1 cut(s)	1251
BsoBI	CYCGRG	1 cut(s)	1058
Bsp119I	TTCGAA	2 cut(s)	172, 218
Bsp1286I	GDGCHC	4 cut(s)	168, 793, 1208, 1485
Bsp1407I	TGTACA	1 cut(s)	592
Bsp143I	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
BspACI	CCGC	2 cut(s)	353, 1997
BspANI	GGCC	1 cut(s)	1251
BspCNI	CTCAG	2 cut(s)	390, 1435
BspFNI	CGCG	1 cut(s)	1816
BspHI	TCATGA	3 cut(s)	364, 1090, 1485
BspLI	GGNNCC	3 cut(s)	167, 636, 1205
BspPI	GGATC	4 cut(s)	629, 642, 715, 1314
BspQI	GCTCTTC	1 cut(s)	1963
BspT104I	TTCGAA	2 cut(s)	172, 218
BspT107I	GGYRCC	2 cut(s)	165, 1203
BsrGI	TGTACA	1 cut(s)	592
BsrI	ACTGG	2 cut(s)	470, 1711
BssECI	CCNNGG	2 cut(s)	194, 585
BssMI	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
BssNAI	GTATAC	1 cut(s)	1449
BssNI	GRCGYC	1 cut(s)	825
BssSI	CACGAG	1 cut(s)	1165
Bst1107I	GTATAC	1 cut(s)	1449
Bst2BI	CACGAG	1 cut(s)	1165
Bst2UI	CCWGG	2 cut(s)	196, 586
Bst4CI	ACNGT	2 cut(s)	518, 1453
Bst6I	CTCTTC	3 cut(s)	1365, 1718, 1963
BstACI	GRCGYC	1 cut(s)	825
BstAPI	GCANNNNNTGC	1 cut(s)	1802
BstAUI	TGTACA	1 cut(s)	592
BstBI	TTCGAA	2 cut(s)	172, 218
BstC8I	GCNNGC	2 cut(s)	1038, 1434
BstDEI	CTNAG	5 cut(s)	398, 1017, 1219, 1443, 1820
BstF5I	GGATG	6 cut(s)	90, 349, 595, 1244, 1512, 2011
BstFNI	CGCG	1 cut(s)	1816
BstHHI	GCGC	2 cut(s)	184, 1818
BstKTI	GATC	7 cut(s)	339, 404, 637, 667, 710, 1309, 1314
BstMAI	GTCTC	4 cut(s)	272, 977, 1409, 1904
BstMBI	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
BstMWI	GCNNNNNNNGC	2 cut(s)	1241, 1802
BstNI	CCWGG	2 cut(s)	196, 586
BstPAI	GACNNNNGTC	1 cut(s)	1514
BstSCI	CCNGG	2 cut(s)	194, 584
BstSFI	CTRYAG	3 cut(s)	649, 1031, 1576
BstSLI	GKGCMC	2 cut(s)	168, 1208
BstUI	CGCG	1 cut(s)	1816
BstV1I	GCAGC	5 cut(s)	286, 443, 1108, 1448, 1981
BstX2I	RGATCY	3 cut(s)	336, 634, 1306
BstYI	RGATCY	3 cut(s)	336, 634, 1306
BstZ17I	GTATAC	1 cut(s)	1449
BsuI	GTATCC	1 cut(s)	937
BsuRI	GGCC	1 cut(s)	1251
BtrI	CACGTC	1 cut(s)	1075
BtsCI	GGATG	6 cut(s)	90, 349, 595, 1244, 1512, 2011
BtsI	GCAGTG	1 cut(s)	514
BtsIMutI	CAGTG	3 cut(s)	477, 514, 523
Cac8I	GCNNGC	2 cut(s)	1038, 1434
CaiI	CAGNNNCTG	1 cut(s)	1442
CciI	TCATGA	3 cut(s)	364, 1090, 1485
CfoI	GCGC	2 cut(s)	184, 1818
Cfr13I	GGNCC	1 cut(s)	1731
CseI	GACGC	1 cut(s)	850
Csp6I	GTAC	4 cut(s)	593, 1521, 1714, 1764
CviAII	CATG	9 cut(s)	365, 870, 1091, 1125, 1135, 1267, 1486, 1664, 1951
CviQI	GTAC	4 cut(s)	593, 1521, 1714, 1764
DdeI	CTNAG	5 cut(s)	398, 1017, 1219, 1443, 1820
DpnI	GATC	7 cut(s)	338, 403, 636, 666, 709, 1308, 1313
DpnII	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
DraI	TTTAAA	1 cut(s)	886
DrdI	GACNNNNNNGTC	1 cut(s)	1985
DseDI	GACNNNNNNGTC	1 cut(s)	1985
EaeI	YGGCCR	1 cut(s)	1249
Eam1104I	CTCTTC	3 cut(s)	1365, 1718, 1963
EarI	CTCTTC	3 cut(s)	1365, 1718, 1963
Ecl136II	GAGCTC	1 cut(s)	1483
Eco24I	GRGCYC	1 cut(s)	1485
Eco32I	GATATC	1 cut(s)	50
Eco47I	GGWCC	1 cut(s)	1731
Eco53kI	GAGCTC	1 cut(s)	1483
Eco57I	CTGAAG	5 cut(s)	126, 402, 1125, 1193, 1575
Eco88I	CYCGRG	1 cut(s)	1058
EcoICRI	GAGCTC	1 cut(s)	1483
EcoRI	GAATTC	1 cut(s)	1581
EcoRII	CCWGG	2 cut(s)	194, 584
EcoRV	GATATC	1 cut(s)	50
EcoT22I	ATGCAT	1 cut(s)	136
EcoT38I	GRGCYC	1 cut(s)	1485
Esp3I	CGTCTC	3 cut(s)	272, 1409, 1904
FaeI	CATG	9 cut(s)	368, 873, 1094, 1128, 1138, 1270, 1489, 1667, 1954
FalI	AAGNNNNNCTT	4 cut(s)	153, 185, 812, 844
FaqI	GGGAC	1 cut(s)	921
FatI	CATG	9 cut(s)	364, 869, 1090, 1124, 1134, 1266, 1485, 1663, 1950
FauNDI	CATATG	1 cut(s)	1082
FbaI	TGATCA	1 cut(s)	1311
FblI	GTMKAC	2 cut(s)	864, 1448
Fnu4HI	GCNGC	5 cut(s)	300, 432, 1122, 1437, 1995
FokI	GGATG	5 cut(s)	97, 336, 602, 1231, 1519
FriOI	GRGCYC	1 cut(s)	1485
Fsp4HI	GCNGC	5 cut(s)	300, 432, 1122, 1437, 1995
FspBI	CTAG	6 cut(s)	80, 96, 1041, 1293, 1611, 1884
FspI	TGCGCA	1 cut(s)	183
GlaI	GCGC	2 cut(s)	183, 1817
GluI	GCNGC	5 cut(s)	300, 432, 1122, 1437, 1995
GsuI	CTGGAG	1 cut(s)	917
HaeIII	GGCC	1 cut(s)	1251
HapII	CCGG	1 cut(s)	1248
HgaI	GACGC	1 cut(s)	850
HhaI	GCGC	2 cut(s)	184, 1818
Hin1I	GRCGYC	1 cut(s)	825
Hin1II	CATG	9 cut(s)	368, 873, 1094, 1128, 1138, 1270, 1489, 1667, 1954
Hin6I	GCGC	2 cut(s)	182, 1816
HinP1I	GCGC	2 cut(s)	182, 1816
HincII	GTYRAC	3 cut(s)	607, 865, 1078
HindII	GTYRAC	3 cut(s)	607, 865, 1078
HindIII	AAGCTT	1 cut(s)	108
HinfI	GANTC	8 cut(s)	376, 866, 899, 1356, 1572, 1640, 1874, 1979
HpaI	GTTAAC	1 cut(s)	607
HpaII	CCGG	1 cut(s)	1248
HphI	GGTGA	7 cut(s)	50, 277, 1271, 1513, 1771, 1773, 1943
Hpy166II	GTNNAC	5 cut(s)	528, 607, 865, 1078, 1449
Hpy188I	TCNGA	7 cut(s)	18, 399, 639, 678, 765, 803, 1311
Hpy8I	GTNNAC	5 cut(s)	528, 607, 865, 1078, 1449
Hpy99I	CGWCG	2 cut(s)	866, 1816
HpyAV	CCTTC	7 cut(s)	179, 218, 814, 1553, 1741, 1832, 1922
HpyCH4III	ACNGT	2 cut(s)	518, 1453
HpyCH4IV	ACGT	2 cut(s)	825, 1074
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1241, 1802
HpyF3I	CTNAG	5 cut(s)	398, 1017, 1219, 1443, 1820
HpySE526I	ACGT	2 cut(s)	825, 1074
Hsp92I	GRCGYC	1 cut(s)	825
Hsp92II	CATG	9 cut(s)	368, 873, 1094, 1128, 1138, 1270, 1489, 1667, 1954
HspAI	GCGC	2 cut(s)	182, 1816
Ksp22I	TGATCA	1 cut(s)	1311
KspAI	GTTAAC	1 cut(s)	607
Kzo9I	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
LguI	GCTCTTC	1 cut(s)	1963
LmnI	GCTCC	2 cut(s)	70, 796
Lsp1109I	GCAGC	5 cut(s)	286, 443, 1108, 1448, 1981
LweI	GCATC	7 cut(s)	169, 364, 1253, 1341, 1821, 1905, 1924
MaeI	CTAG	6 cut(s)	80, 96, 1041, 1293, 1611, 1884
MaeII	ACGT	2 cut(s)	825, 1074
MaeIII	GTNAC	4 cut(s)	1130, 1160, 1779, 1920
MalI	GATC	7 cut(s)	338, 403, 636, 666, 709, 1308, 1313
MboI	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
MflI	RGATCY	3 cut(s)	336, 634, 1306
MhlI	GDGCHC	4 cut(s)	168, 793, 1208, 1485
MluCI	AATT	5 cut(s)	392, 598, 668, 1581, 1960
MlyI	GAGTC	5 cut(s)	385, 860, 908, 1581, 1973
MmeI	TCCRAC	6 cut(s)	255, 656, 696, 781, 986, 1347
Mph1103I	ATGCAT	1 cut(s)	136
MroXI	GAANNNNTTC	3 cut(s)	228, 644, 1462
MseI	TTAA	7 cut(s)	606, 615, 807, 885, 1140, 1191, 1428
MslI	CAYNNNNRTG	2 cut(s)	363, 470
MspI	CCGG	1 cut(s)	1248
MspR9I	CCNGG	2 cut(s)	196, 586
Mva1269I	GAATGC	2 cut(s)	1027, 1145
MvaI	CCWGG	2 cut(s)	196, 586
MvnI	CGCG	1 cut(s)	1816
MwoI	GCNNNNNNNGC	2 cut(s)	1241, 1802
NdeI	CATATG	1 cut(s)	1082
NdeII	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
NlaIII	CATG	9 cut(s)	368, 873, 1094, 1128, 1138, 1270, 1489, 1667, 1954
NlaIV	GGNNCC	3 cut(s)	167, 636, 1205
NmuCI	GTSAC	1 cut(s)	1779
NsbI	TGCGCA	1 cut(s)	183
NsiI	ATGCAT	1 cut(s)	136
NspV	TTCGAA	2 cut(s)	172, 218
OliI	CACNNNNGTG	1 cut(s)	470
PagI	TCATGA	3 cut(s)	364, 1090, 1485
PciSI	GCTCTTC	1 cut(s)	1963
PctI	GAATGC	2 cut(s)	1027, 1145
PdmI	GAANNNNTTC	3 cut(s)	228, 644, 1462
PfeI	GAWTC	3 cut(s)	1356, 1640, 1874
PkrI	GCNGC	5 cut(s)	301, 433, 1123, 1438, 1996
PleI	GAGTC	5 cut(s)	384, 860, 907, 1580, 1973
PpsI	GAGTC	5 cut(s)	384, 860, 907, 1580, 1973
PshAI	GACNNNNGTC	1 cut(s)	1514
PsiI	TTATAA	1 cut(s)	447
Psp124BI	GAGCTC	1 cut(s)	1485
Psp6I	CCWGG	2 cut(s)	194, 584
PspGI	CCWGG	2 cut(s)	194, 584
PspN4I	GGNNCC	3 cut(s)	167, 636, 1205
PspPI	GGNCC	1 cut(s)	1731
PstNI	CAGNNNCTG	1 cut(s)	1442
PsuI	RGATCY	3 cut(s)	336, 634, 1306
RsaI	GTAC	4 cut(s)	594, 1522, 1715, 1765
RsaNI	GTAC	4 cut(s)	593, 1521, 1714, 1764
RseI	CAYNNNNRTG	2 cut(s)	363, 470
SacI	GAGCTC	1 cut(s)	1485
SalI	GTCGAC	1 cut(s)	863
SapI	GCTCTTC	1 cut(s)	1963
SaqAI	TTAA	7 cut(s)	606, 615, 807, 885, 1140, 1191, 1428
SatI	GCNGC	5 cut(s)	300, 432, 1122, 1437, 1995
Sau3AI	GATC	7 cut(s)	336, 401, 634, 664, 707, 1306, 1311
Sau96I	GGNCC	1 cut(s)	1731
ScaI	AGTACT	1 cut(s)	1765
SchI	GAGTC	5 cut(s)	385, 860, 908, 1581, 1973
ScrFI	CCNGG	2 cut(s)	196, 586
SduI	GDGCHC	4 cut(s)	168, 793, 1208, 1485
SfaNI	GCATC	7 cut(s)	169, 364, 1253, 1341, 1821, 1905, 1924
SfcI	CTRYAG	3 cut(s)	649, 1031, 1576
SfuI	TTCGAA	2 cut(s)	172, 218
SinI	GGWCC	1 cut(s)	1731
SmiMI	CAYNNNNRTG	2 cut(s)	363, 470
Sse9I	AATT	5 cut(s)	392, 598, 668, 1581, 1960
SsiI	CCGC	2 cut(s)	353, 1997
SspI	AATATT	2 cut(s)	1240, 1276
SspMI	CTAG	6 cut(s)	80, 96, 1041, 1293, 1611, 1884
SstI	GAGCTC	1 cut(s)	1485
StyD4I	CCNGG	2 cut(s)	194, 584
TaaI	ACNGT	2 cut(s)	518, 1453
TaiI	ACGT	2 cut(s)	828, 1077
TaqI	TCGA	7 cut(s)	172, 218, 663, 864, 1585, 1591, 1926
TasI	AATT	5 cut(s)	392, 598, 668, 1581, 1960
TatI	WGTACW	3 cut(s)	592, 1713, 1763
TfiI	GAWTC	3 cut(s)	1356, 1640, 1874
Tru1I	TTAA	7 cut(s)	606, 615, 807, 885, 1140, 1191, 1428
Tru9I	TTAA	7 cut(s)	606, 615, 807, 885, 1140, 1191, 1428
TscAI	CASTG	3 cut(s)	477, 514, 523
TseFI	GTSAC	1 cut(s)	1779
TseI	GCWGC	5 cut(s)	299, 431, 1121, 1436, 1994
Tsp45I	GTSAC	1 cut(s)	1779
TspDTI	ATGAA	5 cut(s)	1079, 1283, 1455, 1560, 1581
TspRI	CASTG	3 cut(s)	477, 514, 523
VpaK11BI	GGWCC	1 cut(s)	1731
XapI	RAATTY	4 cut(s)	392, 598, 1581, 1960
XbaI	TCTAGA	1 cut(s)	1292
XmiI	GTMKAC	2 cut(s)	864, 1448
XmnI	GAANNNNTTC	3 cut(s)	228, 644, 1462
XspI	CTAG	6 cut(s)	80, 96, 1041, 1293, 1611, 1884
ZraI	GACGTC	1 cut(s)	826
ZrmI	AGTACT	1 cut(s)	1765
Zsp2I	ATGCAT	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.