Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0011614

Physical Location & Seq

Genomic Coordinates Forward (+)

13822648 .. 13827947

Gene Structure 5300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0165800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGAGGCTGGAAGGCATTTTCTTTCTTCATCTTCAGCATTTCCATCAACAACCCAACTCAGGCATCCTCTTCCTCCTTCTTCTCCTTCTACTACTTCAGCTCCTGCAGTTACTTCTCTGCCGACTACATTTATAACTCGACGTTTTCCTACTTCAGTTCTTTTACAAGAGCAGCGCGACGAGTTCAAGCCTCTATTGCACATGTTTAAGGAAGAGAAAACATCTCAGGCTACATTAGATCGGGTGCAGATAGAGAATACAACTGCTGAGGAAGATTTTAACATTGATGACTTTTACAAGTTGGTCAAAGACTTTCGCCAGTTGCATGTTTCACCCTTACAAACTGGTGAAAATCTATCCACCACTTTGGCTTCGAAGTCTAATACCACTGCTAATGAGCATATGGACGTCAAACCATGTGATGTATTGACCCTAGCTAAAAATGCCTTGTCAGCCTCAATTGAAGCAGCCTCTTTAGCTGAAAACTCCAACTCGATCAGAGCTGGTTTTAATGAATCTATTTCTATGGGTTTGGGGTGGGAGGAGGAAACTGTAAGGTCAACCCGACTTCTAGAGAGGCGGCGCAAGCGACTTAAGAAAAGGAGTTTGCTTAACACAAAAGTTCCAAATCATGAGACTAGCAGTTTTAGAAGTTCAGATGTACGGAGAAAATCTAGTGAAGGAATAAATCCTAATGATCCCCTGCGATTATTCTTGTGGGGTCCTGAAACAAGACAACTTTTGACACTTAAAGAAGAGACTGAGTTGATTGCCCGAGTTCAGGATGTATTTAAGTTAGAAGCGGTGAAGAGTAGACTTCAATCTCAATATGGCCGTGAACCAACTTTGGTTGAATGGGCTGAAGCTGTTGGTATCAGTTGTCAGATGTTGCAATCACAGCTTCGCTCTGGTACTAGCAGCCGTGAAAAGTTGATCTATGCTAACTTACGTATGGTTGTGCACATTGCTAAACAATATCAAGGGCGAGGTCTTGGCCTTCAGGATTTACTGCAGGAGGGAAGTATGGGTCTTATGAAAAGTGTTGAGAAATTCAAACCCCAAGCTGGTTGCCGATTTGCTACTTATGCATACTGGTGGGTGAGACAAACAATTAGGAAGGCCATATTTCAACATTCCAGGACTATCCGCTTGCCGGAAAATGTATACACCCTCCTTGGCAAGGTATTGGAGGCAAAGAAATCATATATTCAGGAAGGAAATCACAACCCAAGCAGAGAAGAATTAGCAAGACGAGTTGGAATGTCGGTTGAAAAATTGGGAAAATTGCTATATTCTACAAGAATGCCAGTTTCAATGCAACAAACCGTGTGGGCAGACCAAGATACCACTTTCCAGGAGGTAACTGCTGACACTGGGATTGAGATCCCAGATGTGAGTGTGGCAAAGCAGCTGATGAGACAACATGTGCGCAACCTCCTACACACTCTTGAAAAAAGAGAGAGGCAGATAATCAGGCTAAGATATGGTATTGAAGATGGTAAGCAGAGATCACTATCAGAGATTGGTGAGATTTTTGGGTTGTCCAAGGAACGGGTACGGCAACTGGAGAGCCGAGCATTCCTGAAGCTCAAGGAATCACTTGGCAGCCAAGGGCTTGGGGCTTATGCTCCTTTGCTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016591 GO:0016592 GO:0019219 GO:0019222 GO:0030880 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0080090 GO:0090575 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med7

Protein Analysis

547

Amino Acids

62.14

Weight (kDa)

9.6

Isoelectric Point (pI)

55.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	312 - 381	3.6e-18	Sigma-70 region 2
Sigma70_r3	PF04539	391 - 463	1e-16	Sigma-70 region 3
Sigma70_r4	PF04545	479 - 532	7e-17	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011614)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0478521
rosa_laevigata	RLG00000023641
rosa_multiflora	Rmu_sc0001262.1_g000010 Rmu_sc0008105.1_g000006
rosa_roxburghii	Rroxscaffold_6G00403490
rosa_rugosa	Rorug03G0165800 Rorug03G0166100
rosa_samantha	Rh3AG216300 Rh3AG216700 Rh3AG216800 Rh3AG216900 Rh3AG218000 Rh3AG256500 Rh3BG249500 Rh3CG245300 Rh3CG246900 Rh3CG291400 Rh3DG243400 Rh3DG296000 Rh7CG431200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	134
AatII	GACGTC	1 cut(s)	411
Acc16I	TGCGCA	1 cut(s)	1430
AccI	GTMKAC	2 cut(s)	814, 1164
AccII	CGCG	1 cut(s)	177
AciI	CCGC	3 cut(s)	580, 803, 1147
AclWI	GGATC	2 cut(s)	692, 1378
AcoI	YGGCCR	1 cut(s)	832
AcsI	RAATTY	1 cut(s)	1049
AcuI	CTGAAG	6 cut(s)	18, 81, 138, 882, 983, 1604
AcyI	GRCGYC	1 cut(s)	408
AfaI	GTAC	3 cut(s)	663, 913, 1557
AfiI	CCNNNNNNNGG	6 cut(s)	60, 781, 1064, 1153, 1180, 1551
AflII	CTTAAG	1 cut(s)	593
AflIII	ACRYGT	2 cut(s)	201, 1423
AjnI	CCWGG	2 cut(s)	1136, 1353
AluBI	AGCT	9 cut(s)	101, 437, 479, 503, 866, 901, 1064, 1411, 1588
AluI	AGCT	9 cut(s)	101, 437, 479, 503, 866, 901, 1064, 1411, 1588
Alw21I	GWGCWC	1 cut(s)	963
Alw26I	GTCTC	4 cut(s)	629, 752, 1096, 1411
Alw44I	GTGCAC	1 cut(s)	959
AlwI	GGATC	2 cut(s)	692, 1378
AlwNI	CAGNNNCTG	1 cut(s)	104
Ama87I	CYCGRG	1 cut(s)	774
AoxI	GGCC	3 cut(s)	832, 994, 1119
ApaLI	GTGCAC	1 cut(s)	959
ApeKI	GCWGC	5 cut(s)	172, 467, 918, 1408, 1605
ApoI	RAATTY	1 cut(s)	1049
AspLEI	GCGC	3 cut(s)	177, 585, 1431
AspS9I	GGNCC	1 cut(s)	722
AsuHPI	GGTGA	5 cut(s)	324, 359, 817, 1111, 1538
AsuII	TTCGAA	1 cut(s)	374
AvaI	CYCGRG	1 cut(s)	774
AvaII	GGWCC	1 cut(s)	722
BaeGI	GKGCMC	1 cut(s)	963
Bbv12I	GWGCWC	1 cut(s)	963
BbvCI	CCTCAGC	1 cut(s)	267
BbvI	GCAGC	5 cut(s)	184, 479, 930, 1420, 1617
BccI	CCATC	2 cut(s)	52, 1490
BceAI	ACGGC	3 cut(s)	819, 906, 1574
BciT130I	CCWGG	2 cut(s)	1138, 1355
BcoDI	GTCTC	4 cut(s)	629, 752, 1096, 1411
BfaI	CTAG	5 cut(s)	434, 572, 639, 675, 915
BfmI	CTRYAG	2 cut(s)	105, 1010
BfrI	CTTAAG	1 cut(s)	593
BisI	GCNGC	6 cut(s)	173, 468, 581, 919, 1409, 1606
BlsI	GCNGC	6 cut(s)	174, 469, 582, 920, 1410, 1607
Bme1390I	CCNGG	2 cut(s)	1138, 1355
Bme18I	GGWCC	1 cut(s)	722
BmeT110I	CYCGRG	1 cut(s)	774
BmgT120I	GGNCC	1 cut(s)	722
BmiI	GGNNCC	1 cut(s)	723
BmrFI	CCNGG	2 cut(s)	1138, 1355
BmrI	ACTGGG	1 cut(s)	1383
BmsI	GCATC	1 cut(s)	73
BmuI	ACTGGG	1 cut(s)	1383
BpmI	CTGGAG	1 cut(s)	1586
Bpu10I	CCTNAGC	1 cut(s)	267
Bpu14I	TTCGAA	1 cut(s)	374
BpuEI	CTTGAG	1 cut(s)	1574
BsaAI	YACGTR	1 cut(s)	950
BsaBI	GATNNNNATC	2 cut(s)	1382, 1513
BsaHI	GRCGYC	1 cut(s)	408
BsaJI	CCNNGG	3 cut(s)	1174, 1545, 1609
BsaXI	ACNNNNNCTCC	2 cut(s)	85, 115
Bsc4I	CCNNNNNNNGG	6 cut(s)	60, 781, 1064, 1153, 1180, 1551
Bse1I	ACTGG	6 cut(s)	319, 349, 1097, 1307, 1378, 1569
Bse3DI	GCAATG	1 cut(s)	963
Bse8I	GATNNNNATC	2 cut(s)	1382, 1513
BseBI	CCWGG	2 cut(s)	1138, 1355
BseDI	CCNNGG	3 cut(s)	1174, 1545, 1609
BseGI	GGATG	2 cut(s)	64, 790
BseJI	GATNNNNATC	2 cut(s)	1382, 1513
BseLI	CCNNNNNNNGG	6 cut(s)	60, 781, 1064, 1153, 1180, 1551
BseMI	GCAATG	1 cut(s)	963
BseMII	CTCAG	4 cut(s)	73, 239, 258, 753
BseNI	ACTGG	6 cut(s)	319, 349, 1097, 1307, 1378, 1569
BseRI	GAGGAG	1 cut(s)	557
BseSI	GKGCMC	1 cut(s)	963
BseXI	GCAGC	5 cut(s)	184, 479, 930, 1420, 1617
BsgI	GTGCAG	1 cut(s)	266
Bsh1236I	CGCG	1 cut(s)	177
BshFI	GGCC	3 cut(s)	834, 996, 1121
BsiHKAI	GWGCWC	1 cut(s)	963
BsiHKCI	CYCGRG	1 cut(s)	774
BsiSI	CCGG	1 cut(s)	1154
BslI	CCNNNNNNNGG	6 cut(s)	60, 781, 1064, 1153, 1180, 1551
BsmAI	GTCTC	4 cut(s)	629, 752, 1096, 1411
BsmI	GAATGC	2 cut(s)	1308, 1577
BsnI	GGCC	3 cut(s)	834, 996, 1121
BsoBI	CYCGRG	1 cut(s)	774
Bsp119I	TTCGAA	1 cut(s)	374
Bsp1286I	GDGCHC	1 cut(s)	963
Bsp143I	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
BspACI	CCGC	3 cut(s)	580, 803, 1147
BspANI	GGCC	3 cut(s)	834, 996, 1121
BspCNI	CTCAG	4 cut(s)	72, 238, 259, 754
BspFNI	CGCG	1 cut(s)	177
BspHI	TCATGA	1 cut(s)	631
BspLI	GGNNCC	1 cut(s)	723
BspMAI	CTGCAG	2 cut(s)	109, 1014
BspPI	GGATC	2 cut(s)	692, 1378
BspT104I	TTCGAA	1 cut(s)	374
BspTI	CTTAAG	1 cut(s)	593
BsrDI	GCAATG	1 cut(s)	963
BsrI	ACTGG	6 cut(s)	319, 349, 1097, 1307, 1378, 1569
BssECI	CCNNGG	3 cut(s)	1174, 1545, 1609
BssMI	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
BssNAI	GTATAC	1 cut(s)	1165
BssNI	GRCGYC	1 cut(s)	408
BssT1I	CCWWGG	3 cut(s)	1174, 1545, 1609
Bst1107I	GTATAC	1 cut(s)	1165
Bst2UI	CCWGG	2 cut(s)	1138, 1355
Bst4CI	ACNGT	2 cut(s)	553, 1327
Bst6I	CTCTTC	4 cut(s)	75, 207, 750, 803
BstACI	GRCGYC	1 cut(s)	408
BstAFI	CTTAAG	1 cut(s)	593
BstBAI	YACGTR	1 cut(s)	950
BstBI	TTCGAA	1 cut(s)	374
BstC8I	GCNNGC	2 cut(s)	587, 1151
BstDEI	CTNAG	5 cut(s)	59, 225, 267, 762, 1478
BstENI	CCTNNNNNAGG	1 cut(s)	1178
BstF5I	GGATG	2 cut(s)	64, 790
BstFNI	CGCG	1 cut(s)	177
BstHHI	GCGC	3 cut(s)	177, 585, 1431
BstKTI	GATC	6 cut(s)	241, 498, 700, 936, 1386, 1511
BstMAI	GTCTC	4 cut(s)	629, 752, 1096, 1411
BstMBI	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
BstMWI	GCNNNNNNNGC	7 cut(s)	196, 443, 452, 476, 586, 898, 1085
BstNI	CCWGG	2 cut(s)	1138, 1355
BstNSI	RCATGY	3 cut(s)	205, 329, 1427
BstSCI	CCNGG	2 cut(s)	1136, 1353
BstSFI	CTRYAG	2 cut(s)	105, 1010
BstSLI	GKGCMC	1 cut(s)	963
BstSNI	TACGTA	1 cut(s)	950
BstUI	CGCG	1 cut(s)	177
BstV1I	GCAGC	5 cut(s)	184, 479, 930, 1420, 1617
BstX2I	RGATCY	1 cut(s)	1383
BstXI	CCANNNNNNTGG	2 cut(s)	367, 1616
BstYI	RGATCY	1 cut(s)	1383
BstZ17I	GTATAC	1 cut(s)	1165
BsuRI	GGCC	3 cut(s)	834, 996, 1121
BtsCI	GGATG	2 cut(s)	64, 790
BtsI	GCAGTG	1 cut(s)	387
BtsIMutI	CAGTG	2 cut(s)	387, 1371
Cac8I	GCNNGC	2 cut(s)	587, 1151
CaiI	CAGNNNCTG	1 cut(s)	104
CciI	TCATGA	1 cut(s)	631
CfoI	GCGC	3 cut(s)	177, 585, 1431
Cfr13I	GGNCC	1 cut(s)	722
Csp6I	GTAC	3 cut(s)	662, 912, 1556
CspCI	CAANNNNNGTGG	2 cut(s)	1310, 1345
CviAII	CATG	5 cut(s)	202, 326, 417, 632, 1424
CviQI	GTAC	3 cut(s)	662, 912, 1556
DdeI	CTNAG	5 cut(s)	59, 225, 267, 762, 1478
DpnI	GATC	6 cut(s)	240, 497, 699, 935, 1385, 1510
DpnII	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
EaeI	YGGCCR	1 cut(s)	832
Eam1104I	CTCTTC	4 cut(s)	75, 207, 750, 803
EarI	CTCTTC	4 cut(s)	75, 207, 750, 803
Eco105I	TACGTA	1 cut(s)	950
Eco130I	CCWWGG	3 cut(s)	1174, 1545, 1609
Eco47I	GGWCC	1 cut(s)	722
Eco57I	CTGAAG	6 cut(s)	18, 81, 138, 882, 983, 1604
Eco88I	CYCGRG	1 cut(s)	774
EcoNI	CCTNNNNNAGG	1 cut(s)	1178
EcoO109I	RGGNCCY	1 cut(s)	722
EcoRII	CCWGG	2 cut(s)	1136, 1353
EcoT14I	CCWWGG	3 cut(s)	1174, 1545, 1609
EcoT22I	ATGCAT	1 cut(s)	1090
ErhI	CCWWGG	3 cut(s)	1174, 1545, 1609
FaeI	CATG	5 cut(s)	205, 329, 420, 635, 1427
FatI	CATG	5 cut(s)	201, 325, 416, 631, 1423
FauNDI	CATATG	1 cut(s)	402
FblI	GTMKAC	2 cut(s)	814, 1164
Fnu4HI	GCNGC	6 cut(s)	173, 468, 581, 919, 1409, 1606
FokI	GGATG	2 cut(s)	51, 797
Fsp4HI	GCNGC	6 cut(s)	173, 468, 581, 919, 1409, 1606
FspBI	CTAG	5 cut(s)	434, 572, 639, 675, 915
FspI	TGCGCA	1 cut(s)	1430
GlaI	GCGC	3 cut(s)	176, 584, 1430
GluI	GCNGC	6 cut(s)	173, 468, 581, 919, 1409, 1606
GsuI	CTGGAG	1 cut(s)	1586
HaeIII	GGCC	3 cut(s)	834, 996, 1121
HapII	CCGG	1 cut(s)	1154
HhaI	GCGC	3 cut(s)	177, 585, 1431
Hin1I	GRCGYC	1 cut(s)	408
Hin1II	CATG	5 cut(s)	205, 329, 420, 635, 1427
Hin6I	GCGC	3 cut(s)	175, 583, 1429
HinP1I	GCGC	3 cut(s)	175, 583, 1429
HincII	GTYRAC	1 cut(s)	561
HindII	GTYRAC	1 cut(s)	561
HinfI	GANTC	2 cut(s)	515, 1595
HpaII	CCGG	1 cut(s)	1154
HphI	GGTGA	5 cut(s)	324, 359, 817, 1111, 1538
Hpy166II	GTNNAC	5 cut(s)	561, 815, 839, 961, 1165
Hpy188I	TCNGA	4 cut(s)	500, 658, 885, 1519
Hpy188III	TCNNGA	8 cut(s)	572, 632, 725, 782, 1001, 1211, 1448, 1582
Hpy8I	GTNNAC	5 cut(s)	561, 815, 839, 961, 1165
Hpy99I	CGWCG	2 cut(s)	144, 182
HpyAV	CCTTC	7 cut(s)	6, 87, 96, 674, 1007, 1111, 1208
HpyCH4III	ACNGT	2 cut(s)	553, 1327
HpyCH4IV	ACGT	3 cut(s)	142, 408, 949
HpyCH4V	TGCA	9 cut(s)	107, 199, 247, 325, 892, 961, 1012, 1088, 1318
HpyF10VI	GCNNNNNNNGC	7 cut(s)	196, 443, 452, 476, 586, 898, 1085
HpyF3I	CTNAG	5 cut(s)	59, 225, 267, 762, 1478
HpySE526I	ACGT	3 cut(s)	142, 408, 949
Hsp92I	GRCGYC	1 cut(s)	408
Hsp92II	CATG	5 cut(s)	205, 329, 420, 635, 1427
HspAI	GCGC	3 cut(s)	175, 583, 1429
Kzo9I	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
LmnI	GCTCC	2 cut(s)	106, 1633
Lsp1109I	GCAGC	5 cut(s)	184, 479, 930, 1420, 1617
LweI	GCATC	1 cut(s)	73
MaeI	CTAG	5 cut(s)	434, 572, 639, 675, 915
MaeII	ACGT	3 cut(s)	142, 408, 949
MaeIII	GTNAC	2 cut(s)	109, 1360
MalI	GATC	6 cut(s)	240, 497, 699, 935, 1385, 1510
MboI	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
MfeI	CAATTG	1 cut(s)	459
MflI	RGATCY	1 cut(s)	1383
MhlI	GDGCHC	1 cut(s)	963
MluCI	AATT	6 cut(s)	459, 1049, 1110, 1241, 1274, 1283
MmeI	TCCRAC	2 cut(s)	513, 1237
Mph1103I	ATGCAT	1 cut(s)	1090
MseI	TTAA	8 cut(s)	207, 279, 510, 594, 612, 750, 792, 1642
MslI	CAYNNNNRTG	1 cut(s)	1093
MspA1I	CMGCKG	1 cut(s)	1411
MspCI	CTTAAG	1 cut(s)	593
MspI	CCGG	1 cut(s)	1154
MspR9I	CCNGG	2 cut(s)	1138, 1355
MunI	CAATTG	1 cut(s)	459
Mva1269I	GAATGC	2 cut(s)	1308, 1577
MvaI	CCWGG	2 cut(s)	1138, 1355
MvnI	CGCG	1 cut(s)	177
MwoI	GCNNNNNNNGC	7 cut(s)	196, 443, 452, 476, 586, 898, 1085
NdeI	CATATG	1 cut(s)	402
NdeII	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
NlaIII	CATG	5 cut(s)	205, 329, 420, 635, 1427
NlaIV	GGNNCC	1 cut(s)	723
NmeAIII	GCCGAG	1 cut(s)	1598
NsbI	TGCGCA	1 cut(s)	1430
NsiI	ATGCAT	1 cut(s)	1090
NspI	RCATGY	3 cut(s)	205, 329, 1427
NspV	TTCGAA	1 cut(s)	374
PagI	TCATGA	1 cut(s)	631
PciI	ACATGT	2 cut(s)	201, 1423
PctI	GAATGC	2 cut(s)	1308, 1577
PfeI	GAWTC	2 cut(s)	515, 1595
PfoI	TCCNGGA	2 cut(s)	1136, 1353
PkrI	GCNGC	6 cut(s)	174, 469, 582, 920, 1410, 1607
Ppu21I	YACGTR	1 cut(s)	950
PpuMI	RGGWCCY	1 cut(s)	722
PscI	ACATGT	2 cut(s)	201, 1423
PsiI	TTATAA	1 cut(s)	134
Psp5II	RGGWCCY	1 cut(s)	722
Psp6I	CCWGG	2 cut(s)	1136, 1353
PspGI	CCWGG	2 cut(s)	1136, 1353
PspN4I	GGNNCC	1 cut(s)	723
PspPI	GGNCC	1 cut(s)	722
PspPPI	RGGWCCY	1 cut(s)	722
PstI	CTGCAG	2 cut(s)	109, 1014
PstNI	CAGNNNCTG	1 cut(s)	104
PsuI	RGATCY	1 cut(s)	1383
PvuII	CAGCTG	1 cut(s)	1411
RsaI	GTAC	3 cut(s)	663, 913, 1557
RsaNI	GTAC	3 cut(s)	662, 912, 1556
RseI	CAYNNNNRTG	1 cut(s)	1093
SaqAI	TTAA	8 cut(s)	207, 279, 510, 594, 612, 750, 792, 1642
SatI	GCNGC	6 cut(s)	173, 468, 581, 919, 1409, 1606
Sau3AI	GATC	6 cut(s)	238, 495, 697, 933, 1383, 1508
Sau96I	GGNCC	1 cut(s)	722
ScrFI	CCNGG	2 cut(s)	1138, 1355
SduI	GDGCHC	1 cut(s)	963
SfaNI	GCATC	1 cut(s)	73
SfcI	CTRYAG	2 cut(s)	105, 1010
SfuI	TTCGAA	1 cut(s)	374
SinI	GGWCC	1 cut(s)	722
SmiMI	CAYNNNNRTG	1 cut(s)	1093
SmlI	CTYRAG	2 cut(s)	593, 1589
SmoI	CTYRAG	2 cut(s)	593, 1589
SnaBI	TACGTA	1 cut(s)	950
Sse9I	AATT	6 cut(s)	459, 1049, 1110, 1241, 1274, 1283
SsiI	CCGC	3 cut(s)	580, 803, 1147
SspMI	CTAG	5 cut(s)	434, 572, 639, 675, 915
StyD4I	CCNGG	2 cut(s)	1136, 1353
StyI	CCWWGG	3 cut(s)	1174, 1545, 1609
TaaI	ACNGT	2 cut(s)	553, 1327
TaiI	ACGT	3 cut(s)	145, 411, 952
TaqI	TCGA	3 cut(s)	139, 374, 494
TasI	AATT	6 cut(s)	459, 1049, 1110, 1241, 1274, 1283
TauI	GCSGC	1 cut(s)	583
TfiI	GAWTC	2 cut(s)	515, 1595
Tru1I	TTAA	8 cut(s)	207, 279, 510, 594, 612, 750, 792, 1642
Tru9I	TTAA	8 cut(s)	207, 279, 510, 594, 612, 750, 792, 1642
TscAI	CASTG	2 cut(s)	394, 1378
TseI	GCWGC	5 cut(s)	172, 467, 918, 1408, 1605
TspDTI	ATGAA	3 cut(s)	18, 528, 1049
TspGWI	ACGGA	1 cut(s)	679
TspRI	CASTG	2 cut(s)	394, 1378
Vha464I	CTTAAG	1 cut(s)	593
VneI	GTGCAC	1 cut(s)	959
VpaK11BI	GGWCC	1 cut(s)	722
XagI	CCTNNNNNAGG	1 cut(s)	1178
XapI	RAATTY	1 cut(s)	1049
XbaI	TCTAGA	1 cut(s)	571
XceI	RCATGY	3 cut(s)	205, 329, 1427
XmiI	GTMKAC	2 cut(s)	814, 1164
XspI	CTAG	5 cut(s)	434, 572, 639, 675, 915
ZraI	GACGTC	1 cut(s)	409
Zsp2I	ATGCAT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.