Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0011614

Physical Location & Seq

Genomic Coordinates Forward (+)

13838157 .. 13839641

Gene Structure 1485 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0166100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGCTAGCTAAACAAGGTTGGCGAATTATTCAGTTTCCGGATTCTCTGATTGCCAGGATGTATAAAGCGAGGTACTTTCCAGATTCTTCTTTTTGGGAGGCGGAACACCATCCATCCCCTTCTTTCTCTTGGCGTAGTATTTTTTATGCTAAAGATGTTCTGGTCAAAGGGGCTCGTTGGCAGGTGGGAGATGGGGCTAATATTCTGTTATCCGATCCTTGGGTACCTAGAGCGGCGCCATTTCGTTTAGTACCAGTTCATGGGGGTTGGAATGAGGTATGGAGAGTAAGCAATTTATTGAATAGTGACGGTAGGTGGAATGAAACGTTGGTGCATCAGGTTTGCCATATTGAGGATATTCCGTTTATTTTATCTATTCCATTGAGCAATCGTAGGGTGAAAGATCGTTGGGTGTGGCATTTTGATTCTAAAGGTTTGTTTTCGGTCAAGAGTGCTTATAGACTCTTAATGGAGGAGGAGAGAGTCCAAGAGGTATCTGTGCAGATGCAAGAGTTCTGGAAGAAACTTTGGTCTACTAATATTCCAGGTACGGCTAGAATCTTTCTATGGAAGGTGTTGAATAATTGCTTACCAACTGTAGCTAGATTGATTGAGAAACAGGTCCCTTTGGAGGCATGTCCTTGCACTCTATGTGGAATAGGGGAAGAAACAATTGAACATATTTGCAGACTTTGTCCATATGTGAAGGGCGTTTTGGCGGTTGTCCCTGGTGTAGTACGGGTTGCTTACTCTTTTGGTGCTATGCAGCTAAATTTTACGGATTGGTTAGTGCACTGTGCTTCTAATTTATCTCCTAAATTATGGGCTACTCTTGTATTTAGTTTGTGGGGCATCTGGAGGGAGAGAAATAATAGGGTATGGGATAATAAGAGTTTGGAGGTGGATCATGTAGTGGTGCAGTTGGGGGTGAGGTTTCAGGAGTACCAGAAGTATCATGGCAAGGGCTTTGGGGGAGGCAATAGACTTGTAGTCCCTTGGAAACCTCCGTGTGCAGGGTGGGTTAAGATTAATTTTGATGGTGCATTTCATAAAGATACCAGTTCAGGGGGAATTGGTGTTATTATCCGTGACAATATGGGGAAATGTTTGGGAGGTTTTTATGCTCCAGTTAATAATGTCTCTTCTCCGGAACAGGTTGAGGCTTTAGCTGGGAAGGAGGCAGTCTCAATTGCTTTGCAGCAAGGCCTTTCTCCTGTTATTTTTGAGACGGATTCTCTTACTCTTTTTCATGCTACAAAGCTGAGAGTCATTCCCCATACTTCCTTCAATGGTCGTGTGTATGATGACATTACCTTCCATCTTCAGCAGATGCCGGGTTCTTATTTCACTCATGCTTATCGTCAAGCCAATGTTGTGGCTCATACTTTAGCTAGTTTTGCTTGTTCTTCTTCTAGTTCTTTATTTTGGGGTCTCGAGCCTCCAGATTGTATTGTTGATGTACTTTCTAAGGAGTTTACCTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016591 GO:0016592 GO:0019219 GO:0019222 GO:0030880 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0080090 GO:0090575 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med7

Protein Analysis

494

Amino Acids

56.02

Weight (kDa)

8.63

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	147 - 236	3e-15	zinc-binding in reverse transcriptase
RVT_3	PF13456	344 - 467	9.5e-25	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011614)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0478521
rosa_laevigata	RLG00000023641
rosa_multiflora	Rmu_sc0001262.1_g000010 Rmu_sc0008105.1_g000006
rosa_roxburghii	Rroxscaffold_6G00403490
rosa_rugosa	Rorug03G0165800 Rorug03G0166100
rosa_samantha	Rh3AG216300 Rh3AG216700 Rh3AG216800 Rh3AG216900 Rh3AG218000 Rh3AG256500 Rh3BG249500 Rh3CG245300 Rh3CG246900 Rh3CG291400 Rh3DG243400 Rh3DG296000 Rh7CG431200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	172
Acc36I	ACCTGC	1 cut(s)	172
Acc65I	GGTACC	1 cut(s)	223
AccB1I	GGYRCC	2 cut(s)	223, 235
AccB7I	CCANNNNNTGG	1 cut(s)	260
AccBSI	CCGCTC	1 cut(s)	233
AccI	GTMKAC	1 cut(s)	533
AccIII	TCCGGA	2 cut(s)	37, 1147
AciI	CCGC	3 cut(s)	101, 233, 719
AclI	AACGTT	1 cut(s)	326
AclWI	GGATC	2 cut(s)	209, 912
AcsI	RAATTY	1 cut(s)	772
AcuI	CTGAAG	1 cut(s)	1307
AcyI	GRCGYC	1 cut(s)	236
AfaI	GTAC	7 cut(s)	74, 225, 252, 550, 738, 944, 1461
AfiI	CCNNNNNNNGG	6 cut(s)	219, 260, 352, 631, 1013, 1065
AgsI	TTSAA	4 cut(s)	301, 580, 677, 1288
AhdI	GACNNNNNGTC	1 cut(s)	989
AjnI	CCWGG	3 cut(s)	53, 544, 727
AjuI	GAANNNNNNNTTGG	4 cut(s)	311, 343, 698, 730
AluBI	AGCT	6 cut(s)	8, 602, 769, 1169, 1261, 1391
AluI	AGCT	6 cut(s)	8, 602, 769, 1169, 1261, 1391
Alw21I	GWGCWC	1 cut(s)	795
Alw26I	GTCTC	4 cut(s)	1144, 1189, 1220, 1436
Alw44I	GTGCAC	1 cut(s)	791
AlwI	GGATC	2 cut(s)	209, 912
Ama87I	CYCGRG	1 cut(s)	1433
Aor13HI	TCCGGA	2 cut(s)	37, 1147
AoxI	GGCC	1 cut(s)	1204
ApaLI	GTGCAC	1 cut(s)	791
ApeKI	GCWGC	2 cut(s)	766, 1198
ApoI	RAATTY	1 cut(s)	772
AseI	ATTAAT	1 cut(s)	1029
Asp718I	GGTACC	1 cut(s)	223
AspLEI	GCGC	1 cut(s)	238
AspS9I	GGNCC	1 cut(s)	622
AsuC2I	CCSGG	1 cut(s)	1335
AsuHPI	GGTGA	2 cut(s)	409, 940
AsuNHI	GCTAGC	1 cut(s)	4
AvaI	CYCGRG	1 cut(s)	1433
AvaII	GGWCC	1 cut(s)	622
BaeGI	GKGCMC	1 cut(s)	795
BanI	GGYRCC	2 cut(s)	223, 235
BanII	GRGCYC	1 cut(s)	175
Bbv12I	GWGCWC	1 cut(s)	795
BbvI	GCAGC	2 cut(s)	778, 1210
BccI	CCATC	5 cut(s)	117, 121, 185, 1031, 1326
BceAI	ACGGC	1 cut(s)	567
BciT130I	CCWGG	3 cut(s)	55, 546, 729
BcnI	CCSGG	1 cut(s)	1335
BcoDI	GTCTC	4 cut(s)	1144, 1189, 1220, 1436
BfaI	CTAG	6 cut(s)	5, 228, 555, 603, 1392, 1413
BfmI	CTRYAG	1 cut(s)	597
BfoI	RGCGCY	1 cut(s)	239
BfuAI	ACCTGC	1 cut(s)	172
BisI	GCNGC	3 cut(s)	234, 767, 1199
BlsI	GCNGC	3 cut(s)	235, 768, 1200
Bme1390I	CCNGG	4 cut(s)	55, 546, 729, 1335
Bme18I	GGWCC	1 cut(s)	622
BmeRI	GACNNNNNGTC	1 cut(s)	989
BmeT110I	CYCGRG	1 cut(s)	1433
BmgT120I	GGNCC	1 cut(s)	622
BmiI	GGNNCC	3 cut(s)	225, 237, 624
BmrFI	CCNGG	4 cut(s)	55, 546, 729, 1335
BmsI	GCATC	4 cut(s)	343, 495, 861, 1320
BmtI	GCTAGC	1 cut(s)	8
BplI	GAGNNNNNCTC	3 cut(s)	1169, 1201, 1463
BpmI	CTGGAG	3 cut(s)	877, 1110, 1425
BpuMI	CCSGG	1 cut(s)	1335
BsaHI	GRCGYC	1 cut(s)	236
BsaI	GGTCTC	1 cut(s)	1436
BsaJI	CCNNGG	3 cut(s)	218, 727, 995
BsaWI	WCCGGW	2 cut(s)	37, 1147
Bsc4I	CCNNNNNNNGG	6 cut(s)	219, 260, 352, 631, 1013, 1065
Bse1I	ACTGG	3 cut(s)	254, 1059, 1127
BseAI	TCCGGA	2 cut(s)	37, 1147
BseBI	CCWGG	3 cut(s)	55, 546, 729
BseDI	CCNNGG	3 cut(s)	218, 727, 995
BseGI	GGATG	3 cut(s)	63, 109, 113
BseLI	CCNNNNNNNGG	6 cut(s)	219, 260, 352, 631, 1013, 1065
BseMII	CTCAG	1 cut(s)	1253
BseNI	ACTGG	3 cut(s)	254, 1059, 1127
BseRI	GAGGAG	2 cut(s)	488, 491
BseSI	GKGCMC	1 cut(s)	795
BseXI	GCAGC	2 cut(s)	778, 1210
BseYI	CCCAGC	1 cut(s)	1169
BsgI	GTGCAG	3 cut(s)	521, 938, 1032
BshFI	GGCC	1 cut(s)	1206
BshNI	GGYRCC	2 cut(s)	223, 235
BsiHKAI	GWGCWC	1 cut(s)	795
BsiHKCI	CYCGRG	1 cut(s)	1433
BsiSI	CCGG	3 cut(s)	38, 1148, 1334
BslFI	GGGAC	3 cut(s)	608, 710, 977
BslI	CCNNNNNNNGG	6 cut(s)	219, 260, 352, 631, 1013, 1065
BsmAI	GTCTC	4 cut(s)	1144, 1189, 1220, 1436
BsmBI	CGTCTC	1 cut(s)	1220
BsmFI	GGGAC	3 cut(s)	608, 710, 977
BsnI	GGCC	1 cut(s)	1206
Bso31I	GGTCTC	1 cut(s)	1436
BsoBI	CYCGRG	1 cut(s)	1433
Bsp1286I	GDGCHC	2 cut(s)	175, 795
Bsp13I	TCCGGA	2 cut(s)	37, 1147
Bsp143I	GATC	3 cut(s)	214, 403, 904
BspACI	CCGC	3 cut(s)	101, 233, 719
BspANI	GGCC	1 cut(s)	1206
BspCNI	CTCAG	1 cut(s)	1254
BspEI	TCCGGA	2 cut(s)	37, 1147
BspLI	GGNNCC	3 cut(s)	225, 237, 624
BspMI	ACCTGC	1 cut(s)	172
BspOI	GCTAGC	1 cut(s)	8
BspPI	GGATC	2 cut(s)	209, 912
BspT107I	GGYRCC	2 cut(s)	223, 235
BspTNI	GGTCTC	1 cut(s)	1436
BsrBI	CCGCTC	1 cut(s)	233
BsrI	ACTGG	3 cut(s)	254, 1059, 1127
BssECI	CCNNGG	3 cut(s)	218, 727, 995
BssMI	GATC	3 cut(s)	214, 403, 904
BssNI	GRCGYC	1 cut(s)	236
BssT1I	CCWWGG	2 cut(s)	218, 995
Bst2UI	CCWGG	3 cut(s)	55, 546, 729
Bst4CI	ACNGT	3 cut(s)	311, 598, 797
Bst6I	CTCTTC	1 cut(s)	1147
BstACI	GRCGYC	1 cut(s)	236
BstC8I	GCNNGC	1 cut(s)	6
BstDEI	CTNAG	2 cut(s)	1262, 1467
BstF5I	GGATG	3 cut(s)	63, 109, 113
BstH2I	RGCGCY	1 cut(s)	239
BstHHI	GCGC	1 cut(s)	238
BstKTI	GATC	3 cut(s)	217, 406, 907
BstMAI	GTCTC	4 cut(s)	1144, 1189, 1220, 1436
BstMBI	GATC	3 cut(s)	214, 403, 904
BstMWI	GCNNNNNNNGC	1 cut(s)	1397
BstNI	CCWGG	3 cut(s)	55, 546, 729
BstNSI	RCATGY	1 cut(s)	639
BstSCI	CCNGG	4 cut(s)	53, 544, 727, 1333
BstSFI	CTRYAG	1 cut(s)	597
BstSLI	GKGCMC	1 cut(s)	795
BstV1I	GCAGC	2 cut(s)	778, 1210
BstXI	CCANNNNNNTGG	1 cut(s)	1375
BsuRI	GGCC	1 cut(s)	1206
BtsCI	GGATG	3 cut(s)	63, 109, 113
BtsIMutI	CAGTG	1 cut(s)	793
BveI	ACCTGC	1 cut(s)	172
Cac8I	GCNNGC	1 cut(s)	6
CfoI	GCGC	1 cut(s)	238
Cfr13I	GGNCC	1 cut(s)	622
Csp6I	GTAC	7 cut(s)	73, 224, 251, 549, 737, 943, 1460
CviAII	CATG	6 cut(s)	260, 636, 908, 956, 1250, 1352
CviQI	GTAC	7 cut(s)	73, 224, 251, 549, 737, 943, 1460
DdeI	CTNAG	2 cut(s)	1262, 1467
DinI	GGCGCC	1 cut(s)	237
DpnI	GATC	3 cut(s)	216, 405, 906
DpnII	GATC	3 cut(s)	214, 403, 904
DriI	GACNNNNNGTC	1 cut(s)	989
Eam1104I	CTCTTC	1 cut(s)	1147
Eam1105I	GACNNNNNGTC	1 cut(s)	989
EarI	CTCTTC	1 cut(s)	1147
EciI	GGCGGA	1 cut(s)	116
Eco130I	CCWWGG	2 cut(s)	218, 995
Eco147I	AGGCCT	1 cut(s)	1206
Eco24I	GRGCYC	1 cut(s)	175
Eco31I	GGTCTC	1 cut(s)	1436
Eco47I	GGWCC	1 cut(s)	622
Eco57I	CTGAAG	1 cut(s)	1307
Eco88I	CYCGRG	1 cut(s)	1433
EcoO109I	RGGNCCY	1 cut(s)	622
EcoRII	CCWGG	3 cut(s)	53, 544, 727
EcoT14I	CCWWGG	2 cut(s)	218, 995
EcoT38I	GRGCYC	1 cut(s)	175
EgeI	GGCGCC	1 cut(s)	237
EheI	GGCGCC	1 cut(s)	237
ErhI	CCWWGG	2 cut(s)	218, 995
Esp3I	CGTCTC	1 cut(s)	1220
FaeI	CATG	6 cut(s)	263, 639, 911, 959, 1253, 1355
FaqI	GGGAC	3 cut(s)	608, 710, 977
FatI	CATG	6 cut(s)	259, 635, 907, 955, 1249, 1351
FauNDI	CATATG	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	533
Fnu4HI	GCNGC	3 cut(s)	234, 767, 1199
FokI	GGATG	3 cut(s)	70, 96, 100
FriOI	GRGCYC	1 cut(s)	175
Fsp4HI	GCNGC	3 cut(s)	234, 767, 1199
FspBI	CTAG	6 cut(s)	5, 228, 555, 603, 1392, 1413
GlaI	GCGC	1 cut(s)	237
GluI	GCNGC	3 cut(s)	234, 767, 1199
GsaI	CCCAGC	1 cut(s)	1173
GsuI	CTGGAG	3 cut(s)	877, 1110, 1425
HaeII	RGCGCY	1 cut(s)	239
HaeIII	GGCC	1 cut(s)	1206
HapII	CCGG	3 cut(s)	38, 1148, 1334
HhaI	GCGC	1 cut(s)	238
Hin1I	GRCGYC	1 cut(s)	236
Hin1II	CATG	6 cut(s)	263, 639, 911, 959, 1253, 1355
Hin6I	GCGC	1 cut(s)	236
HinP1I	GCGC	1 cut(s)	236
HinfI	GANTC	8 cut(s)	41, 83, 425, 462, 483, 558, 1232, 1266
HpaII	CCGG	3 cut(s)	38, 1148, 1334
HphI	GGTGA	2 cut(s)	409, 940
Hpy166II	GTNNAC	3 cut(s)	534, 793, 1476
Hpy188I	TCNGA	2 cut(s)	48, 214
Hpy188III	TCNNGA	9 cut(s)	38, 80, 448, 517, 856, 938, 1148, 1433, 1442
Hpy8I	GTNNAC	3 cut(s)	534, 793, 1476
HpyAV	CCTTC	6 cut(s)	129, 565, 700, 1168, 1294, 1324
HpyCH4III	ACNGT	3 cut(s)	311, 598, 797
HpyCH4IV	ACGT	1 cut(s)	326
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1397
HpyF3I	CTNAG	2 cut(s)	1262, 1467
HpySE526I	ACGT	1 cut(s)	326
Hsp92I	GRCGYC	1 cut(s)	236
Hsp92II	CATG	6 cut(s)	263, 639, 911, 959, 1253, 1355
HspAI	GCGC	1 cut(s)	236
KasI	GGCGCC	1 cut(s)	235
Kpn2I	TCCGGA	2 cut(s)	37, 1147
KpnI	GGTACC	1 cut(s)	227
Kzo9I	GATC	3 cut(s)	214, 403, 904
LmnI	GCTCC	1 cut(s)	1129
Lsp1109I	GCAGC	2 cut(s)	778, 1210
LweI	GCATC	4 cut(s)	343, 495, 861, 1320
MaeI	CTAG	6 cut(s)	5, 228, 555, 603, 1392, 1413
MaeII	ACGT	1 cut(s)	326
MaeIII	GTNAC	2 cut(s)	305, 1088
MalI	GATC	3 cut(s)	216, 405, 906
MbiI	CCGCTC	1 cut(s)	233
MboI	GATC	3 cut(s)	214, 403, 904
MboII	GAAGA	7 cut(s)	78, 532, 677, 1134, 1313, 1398, 1401
MfeI	CAATTG	2 cut(s)	672, 1188
MhlI	GDGCHC	2 cut(s)	175, 795
Mly113I	GGCGCC	1 cut(s)	236
MlyI	GAGTC	3 cut(s)	456, 492, 1275
MmeI	TCCRAC	1 cut(s)	248
MroI	TCCGGA	2 cut(s)	37, 1147
MseI	TTAA	4 cut(s)	467, 1023, 1029, 1131
MspI	CCGG	3 cut(s)	38, 1148, 1334
MspR9I	CCNGG	4 cut(s)	55, 546, 729, 1335
MunI	CAATTG	2 cut(s)	672, 1188
MvaI	CCWGG	3 cut(s)	55, 546, 729
MwoI	GCNNNNNNNGC	1 cut(s)	1397
NarI	GGCGCC	1 cut(s)	236
NciI	CCSGG	1 cut(s)	1335
NdeI	CATATG	1 cut(s)	700
NdeII	GATC	3 cut(s)	214, 403, 904
NheI	GCTAGC	1 cut(s)	4
NlaIII	CATG	6 cut(s)	263, 639, 911, 959, 1253, 1355
NlaIV	GGNNCC	3 cut(s)	225, 237, 624
NmuCI	GTSAC	2 cut(s)	305, 1088
NspI	RCATGY	1 cut(s)	639
PaeR7I	CTCGAG	1 cut(s)	1433
PaqCI	CACCTGC	1 cut(s)	172
PceI	AGGCCT	1 cut(s)	1206
PfeI	GAWTC	5 cut(s)	41, 83, 425, 558, 1232
PflFI	GACNNNGTC	1 cut(s)	693
PflMI	CCANNNNNTGG	1 cut(s)	260
PkrI	GCNGC	3 cut(s)	235, 768, 1200
PleI	GAGTC	3 cut(s)	456, 491, 1274
PluTI	GGCGCC	1 cut(s)	239
PpsI	GAGTC	3 cut(s)	456, 491, 1274
PpuMI	RGGWCCY	1 cut(s)	622
PshBI	ATTAAT	1 cut(s)	1029
Psp1406I	AACGTT	1 cut(s)	326
Psp5II	RGGWCCY	1 cut(s)	622
Psp6I	CCWGG	3 cut(s)	53, 544, 727
PspFI	CCCAGC	1 cut(s)	1169
PspGI	CCWGG	3 cut(s)	53, 544, 727
PspN4I	GGNNCC	3 cut(s)	225, 237, 624
PspPI	GGNCC	1 cut(s)	622
PspPPI	RGGWCCY	1 cut(s)	622
PsyI	GACNNNGTC	1 cut(s)	693
RsaI	GTAC	7 cut(s)	74, 225, 252, 550, 738, 944, 1461
RsaNI	GTAC	7 cut(s)	73, 224, 251, 549, 737, 943, 1460
SaqAI	TTAA	4 cut(s)	467, 1023, 1029, 1131
SatI	GCNGC	3 cut(s)	234, 767, 1199
Sau3AI	GATC	3 cut(s)	214, 403, 904
Sau96I	GGNCC	1 cut(s)	622
SchI	GAGTC	3 cut(s)	456, 492, 1275
ScrFI	CCNGG	4 cut(s)	55, 546, 729, 1335
SduI	GDGCHC	2 cut(s)	175, 795
SfaNI	GCATC	4 cut(s)	343, 495, 861, 1320
SfcI	CTRYAG	1 cut(s)	597
SfoI	GGCGCC	1 cut(s)	237
Sfr274I	CTCGAG	1 cut(s)	1433
SinI	GGWCC	1 cut(s)	622
SlaI	CTCGAG	1 cut(s)	1433
SmlI	CTYRAG	1 cut(s)	1433
SmoI	CTYRAG	1 cut(s)	1433
SseBI	AGGCCT	1 cut(s)	1206
SsiI	CCGC	3 cut(s)	101, 233, 719
SspDI	GGCGCC	1 cut(s)	235
SspI	AATATT	2 cut(s)	202, 541
SspMI	CTAG	6 cut(s)	5, 228, 555, 603, 1392, 1413
StuI	AGGCCT	1 cut(s)	1206
StyD4I	CCNGG	4 cut(s)	53, 544, 727, 1333
StyI	CCWWGG	2 cut(s)	218, 995
TaaI	ACNGT	3 cut(s)	311, 598, 797
TaiI	ACGT	1 cut(s)	329
TaqI	TCGA	1 cut(s)	1434
TaqII	GACCGA	1 cut(s)	433
TatI	WGTACW	1 cut(s)	1459
TauI	GCSGC	1 cut(s)	236
TfiI	GAWTC	5 cut(s)	41, 83, 425, 558, 1232
Tru1I	TTAA	4 cut(s)	467, 1023, 1029, 1131
Tru9I	TTAA	4 cut(s)	467, 1023, 1029, 1131
TscAI	CASTG	1 cut(s)	800
TseFI	GTSAC	2 cut(s)	305, 1088
TseI	GCWGC	2 cut(s)	766, 1198
Tsp45I	GTSAC	2 cut(s)	305, 1088
TspDTI	ATGAA	4 cut(s)	248, 336, 1037, 1238
TspGWI	ACGGA	5 cut(s)	351, 794, 996, 1076, 1244
TspRI	CASTG	1 cut(s)	800
Tth111I	GACNNNGTC	1 cut(s)	693
Van91I	CCANNNNNTGG	1 cut(s)	260
VneI	GTGCAC	1 cut(s)	791
VpaK11BI	GGWCC	1 cut(s)	622
VspI	ATTAAT	1 cut(s)	1029
XapI	RAATTY	1 cut(s)	772
XceI	RCATGY	1 cut(s)	639
XcmI	CCANNNNNNNNNTGG	1 cut(s)	953
XhoI	CTCGAG	1 cut(s)	1433
XmiI	GTMKAC	1 cut(s)	533
XspI	CTAG	6 cut(s)	5, 228, 555, 603, 1392, 1413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.