Pre-mRNA-splicing factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0478521 |
| rosa_laevigata | RLG00000023641 |
| rosa_multiflora | Rmu_sc0001262.1_g000010 Rmu_sc0008105.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00403490 |
| rosa_rugosa | Rorug03G0165800 Rorug03G0166100 |
| rosa_samantha | Rh3AG216300 Rh3AG216700 Rh3AG216800 Rh3AG216900 Rh3AG218000 Rh3AG256500 Rh3BG249500 Rh3CG245300 Rh3CG246900 Rh3CG291400 Rh3DG243400 Rh3DG296000 Rh7CG431200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 146 |
| AciI | CCGC | 4 cut(s) | 49, 74, 150, 181 |
| AcuI | CTGAAG | 1 cut(s) | 143 |
| Alw21I | GWGCWC | 1 cut(s) | 70 |
| Alw26I | GTCTC | 1 cut(s) | 57 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 191, 223 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| AvaII | GGWCC | 1 cut(s) | 163 |
| BanI | GGYRCC | 1 cut(s) | 146 |
| Bbv12I | GWGCWC | 1 cut(s) | 70 |
| BclI | TGATCA | 1 cut(s) | 16 |
| BcoDI | GTCTC | 1 cut(s) | 57 |
| Bme18I | GGWCC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 1 cut(s) | 148 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 55, 87 |
| BpmI | CTGGAG | 2 cut(s) | 66, 91 |
| BsaI | GGTCTC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 2 cut(s) | 56, 142 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 110, 140 |
| BseDI | CCNNGG | 2 cut(s) | 56, 142 |
| BseGI | GGATG | 2 cut(s) | 88, 177 |
| BseRI | GAGGAG | 2 cut(s) | 60, 128 |
| BshNI | GGYRCC | 1 cut(s) | 146 |
| BsiHKAI | GWGCWC | 1 cut(s) | 70 |
| BsmAI | GTCTC | 1 cut(s) | 57 |
| Bso31I | GGTCTC | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 1 cut(s) | 70 |
| Bsp143I | GATC | 3 cut(s) | 16, 85, 283 |
| BspACI | CCGC | 4 cut(s) | 49, 74, 150, 181 |
| BspLI | GGNNCC | 1 cut(s) | 148 |
| BspT107I | GGYRCC | 1 cut(s) | 146 |
| BspTNI | GGTCTC | 1 cut(s) | 57 |
| BssECI | CCNNGG | 2 cut(s) | 56, 142 |
| BssMI | GATC | 3 cut(s) | 16, 85, 283 |
| Bst4CI | ACNGT | 2 cut(s) | 35, 173 |
| Bst6I | CTCTTC | 1 cut(s) | 56 |
| BstDEI | CTNAG | 1 cut(s) | 28 |
| BstDSI | CCRYGG | 1 cut(s) | 142 |
| BstF5I | GGATG | 2 cut(s) | 88, 177 |
| BstKTI | GATC | 3 cut(s) | 19, 88, 286 |
| BstMAI | GTCTC | 1 cut(s) | 57 |
| BstMBI | GATC | 3 cut(s) | 16, 85, 283 |
| BtgI | CCRYGG | 1 cut(s) | 142 |
| BtsCI | GGATG | 2 cut(s) | 88, 177 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CviJI | RGCY | 1 cut(s) | 24 |
| CviKI_1 | RGCY | 1 cut(s) | 24 |
| DdeI | CTNAG | 1 cut(s) | 28 |
| DpnI | GATC | 3 cut(s) | 18, 87, 285 |
| DpnII | GATC | 3 cut(s) | 16, 85, 283 |
| Eam1104I | CTCTTC | 1 cut(s) | 56 |
| EarI | CTCTTC | 1 cut(s) | 56 |
| EciI | GGCGGA | 1 cut(s) | 63 |
| Eco31I | GGTCTC | 1 cut(s) | 57 |
| Eco47I | GGWCC | 1 cut(s) | 163 |
| Eco57I | CTGAAG | 1 cut(s) | 143 |
| EcoO109I | RGGNCCY | 1 cut(s) | 163 |
| FaiI | YATR | 1 cut(s) | 292 |
| FbaI | TGATCA | 1 cut(s) | 16 |
| FokI | GGATG | 2 cut(s) | 75, 164 |
| GsuI | CTGGAG | 2 cut(s) | 66, 91 |
| HinfI | GANTC | 1 cut(s) | 296 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy166II | GTNNAC | 1 cut(s) | 220 |
| Hpy188I | TCNGA | 3 cut(s) | 57, 256, 288 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 300 |
| Hpy8I | GTNNAC | 1 cut(s) | 220 |
| HpyAV | CCTTC | 1 cut(s) | 236 |
| HpyCH4III | ACNGT | 2 cut(s) | 35, 173 |
| HpyF3I | CTNAG | 1 cut(s) | 28 |
| Ksp22I | TGATCA | 1 cut(s) | 16 |
| Kzo9I | GATC | 3 cut(s) | 16, 85, 283 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 3 cut(s) | 96, 121, 146 |
| MaeIII | GTNAC | 1 cut(s) | 173 |
| MalI | GATC | 3 cut(s) | 18, 87, 285 |
| MboI | GATC | 3 cut(s) | 16, 85, 283 |
| MboII | GAAGA | 2 cut(s) | 73, 149 |
| MhlI | GDGCHC | 1 cut(s) | 70 |
| MluCI | AATT | 1 cut(s) | 267 |
| MnlI | CCTC | 8 cut(s) | 51, 81, 102, 108, 115, 134, 146, 149 |
| NdeII | GATC | 3 cut(s) | 16, 85, 283 |
| NlaIV | GGNNCC | 1 cut(s) | 148 |
| NmuCI | GTSAC | 1 cut(s) | 173 |
| PfeI | GAWTC | 1 cut(s) | 296 |
| PpuMI | RGGWCCY | 1 cut(s) | 163 |
| Psp5II | RGGWCCY | 1 cut(s) | 163 |
| PspN4I | GGNNCC | 1 cut(s) | 148 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| PspPPI | RGGWCCY | 1 cut(s) | 163 |
| Sau3AI | GATC | 3 cut(s) | 16, 85, 283 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| SduI | GDGCHC | 1 cut(s) | 70 |
| SetI | ASST | 4 cut(s) | 107, 126, 165, 219 |
| SinI | GGWCC | 1 cut(s) | 163 |
| Sse9I | AATT | 1 cut(s) | 267 |
| SsiI | CCGC | 4 cut(s) | 49, 74, 150, 181 |
| TaaI | ACNGT | 2 cut(s) | 35, 173 |
| TasI | AATT | 1 cut(s) | 267 |
| TfiI | GAWTC | 1 cut(s) | 296 |
| TseFI | GTSAC | 1 cut(s) | 173 |
| Tsp45I | GTSAC | 1 cut(s) | 173 |
| TspGWI | ACGGA | 1 cut(s) | 131 |
| VpaK11BI | GGWCC | 1 cut(s) | 163 |