Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0478521 |
| rosa_laevigata | RLG00000023641 |
| rosa_multiflora | Rmu_sc0001262.1_g000010 Rmu_sc0008105.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00403490 |
| rosa_rugosa | Rorug03G0165800 Rorug03G0166100 |
| rosa_samantha | Rh3AG216300 Rh3AG216700 Rh3AG216800 Rh3AG216900 Rh3AG218000 Rh3AG256500 Rh3BG249500 Rh3CG245300 Rh3CG246900 Rh3CG291400 Rh3DG243400 Rh3DG296000 Rh7CG431200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 39, 248 |
| AciI | CCGC | 1 cut(s) | 89 |
| AclWI | GGATC | 2 cut(s) | 59, 156 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 101 |
| AgsI | TTSAA | 1 cut(s) | 101 |
| AjnI | CCWGG | 1 cut(s) | 274 |
| AluBI | AGCT | 3 cut(s) | 43, 77, 181 |
| AluI | AGCT | 3 cut(s) | 43, 77, 181 |
| AlwI | GGATC | 2 cut(s) | 59, 156 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| AsuC2I | CCSGG | 1 cut(s) | 175 |
| AsuHPI | GGTGA | 1 cut(s) | 264 |
| BccI | CCATC | 1 cut(s) | 220 |
| BciT130I | CCWGG | 1 cut(s) | 276 |
| BcnI | CCSGG | 1 cut(s) | 175 |
| BfmI | CTRYAG | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 2 cut(s) | 175, 276 |
| BmrFI | CCNGG | 2 cut(s) | 175, 276 |
| Bpu10I | CCTNAGC | 1 cut(s) | 81 |
| BpuMI | CCSGG | 1 cut(s) | 175 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 101 |
| BseBI | CCWGG | 1 cut(s) | 276 |
| BseGI | GGATG | 1 cut(s) | 251 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BseYI | CCCAGC | 1 cut(s) | 139 |
| BsiSI | CCGG | 1 cut(s) | 174 |
| BslFI | GGGAC | 1 cut(s) | 118 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BsmFI | GGGAC | 1 cut(s) | 118 |
| Bsp143I | GATC | 3 cut(s) | 64, 71, 148 |
| BspACI | CCGC | 1 cut(s) | 89 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspPI | GGATC | 2 cut(s) | 59, 156 |
| BssMI | GATC | 3 cut(s) | 64, 71, 148 |
| Bst2UI | CCWGG | 1 cut(s) | 276 |
| Bst4CI | ACNGT | 1 cut(s) | 33 |
| Bst6I | CTCTTC | 1 cut(s) | 274 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstF5I | GGATG | 1 cut(s) | 251 |
| BstKTI | GATC | 3 cut(s) | 67, 74, 151 |
| BstMBI | GATC | 3 cut(s) | 64, 71, 148 |
| BstNI | CCWGG | 1 cut(s) | 276 |
| BstSCI | CCNGG | 2 cut(s) | 173, 274 |
| BstSFI | CTRYAG | 1 cut(s) | 6 |
| BstX2I | RGATCY | 2 cut(s) | 64, 148 |
| BstYI | RGATCY | 2 cut(s) | 64, 148 |
| BtsCI | GGATG | 1 cut(s) | 251 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| CsiI | ACCWGGT | 1 cut(s) | 274 |
| CviJI | RGCY | 5 cut(s) | 5, 43, 77, 181, 287 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 43, 77, 181, 287 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 3 cut(s) | 66, 73, 150 |
| DpnII | GATC | 3 cut(s) | 64, 71, 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 274 |
| EarI | CTCTTC | 1 cut(s) | 274 |
| EcoRII | CCWGG | 1 cut(s) | 274 |
| FaiI | YATR | 7 cut(s) | 39, 46, 109, 120, 137, 248, 303 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 253, 285 |
| FaqI | GGGAC | 1 cut(s) | 118 |
| FokI | GGATG | 1 cut(s) | 238 |
| GsaI | CCCAGC | 1 cut(s) | 143 |
| HapII | CCGG | 1 cut(s) | 174 |
| HinfI | GANTC | 1 cut(s) | 170 |
| HpaII | CCGG | 1 cut(s) | 174 |
| HphI | GGTGA | 1 cut(s) | 264 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyCH4III | ACNGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 4 cut(s) | 61, 201, 211, 241 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| Kzo9I | GATC | 3 cut(s) | 64, 71, 148 |
| LmnI | GCTCC | 1 cut(s) | 82 |
| LpnPI | CCDG | 6 cut(s) | 82, 93, 125, 187, 261, 288 |
| MabI | ACCWGGT | 1 cut(s) | 274 |
| MaeIII | GTNAC | 1 cut(s) | 263 |
| MalI | GATC | 3 cut(s) | 66, 73, 150 |
| MboI | GATC | 3 cut(s) | 64, 71, 148 |
| MboII | GAAGA | 2 cut(s) | 235, 261 |
| MfeI | CAATTG | 2 cut(s) | 96, 217 |
| MflI | RGATCY | 2 cut(s) | 64, 148 |
| MluCI | AATT | 3 cut(s) | 96, 127, 217 |
| MnlI | CCTC | 3 cut(s) | 33, 277, 288 |
| MseI | TTAA | 1 cut(s) | 307 |
| MspI | CCGG | 1 cut(s) | 174 |
| MspR9I | CCNGG | 2 cut(s) | 175, 276 |
| MunI | CAATTG | 2 cut(s) | 96, 217 |
| MvaI | CCWGG | 1 cut(s) | 276 |
| NciI | CCSGG | 1 cut(s) | 175 |
| NdeII | GATC | 3 cut(s) | 64, 71, 148 |
| NmuCI | GTSAC | 1 cut(s) | 263 |
| PfeI | GAWTC | 1 cut(s) | 170 |
| PfoI | TCCNGGA | 1 cut(s) | 173 |
| PsiI | TTATAA | 2 cut(s) | 39, 248 |
| Psp6I | CCWGG | 1 cut(s) | 274 |
| PspFI | CCCAGC | 1 cut(s) | 139 |
| PspGI | CCWGG | 1 cut(s) | 274 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| PsuI | RGATCY | 2 cut(s) | 64, 148 |
| SaqAI | TTAA | 1 cut(s) | 307 |
| Sau3AI | GATC | 3 cut(s) | 64, 71, 148 |
| ScrFI | CCNGG | 2 cut(s) | 175, 276 |
| SetI | ASST | 6 cut(s) | 17, 25, 45, 79, 183, 277 |
| SexAI | ACCWGGT | 1 cut(s) | 274 |
| SfcI | CTRYAG | 1 cut(s) | 6 |
| Sse9I | AATT | 3 cut(s) | 96, 127, 217 |
| SsiI | CCGC | 1 cut(s) | 89 |
| StyD4I | CCNGG | 2 cut(s) | 173, 274 |
| TaaI | ACNGT | 1 cut(s) | 33 |
| TasI | AATT | 3 cut(s) | 96, 127, 217 |
| TfiI | GAWTC | 1 cut(s) | 170 |
| Tru1I | TTAA | 1 cut(s) | 307 |
| Tru9I | TTAA | 1 cut(s) | 307 |
| TseFI | GTSAC | 1 cut(s) | 263 |
| Tsp45I | GTSAC | 1 cut(s) | 263 |