Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001581

Physical Location & Seq

Genomic Coordinates Reverse (-)

21554396 .. 21556295

Gene Structure 1900 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0233400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGAAGCTTGAAGTGCAAGTAAGCTCCAAGGAGAATATCAAACCATCTTCTCCAACCCCCGGCCATCTTCGCTATCACCCCTTGTCTTTTCTTGATCAAATCAATAGCCCATCCTACTTCTGTTTTGTGCACTTCTATGAACTGAATGGAGGAGACACACAACCTGAAACTAGCGAGATATCCGGCCATCTCAAGAAGTCGTTAGCCGAGGTCTTAACCCTTTTCTACCCACTCGCTGGACGACTCAAAGACAACCTTTATGTTCACTGCAATGATGAGGGCATAGCGTACCTTGAAGCTCGAGTCAACAAGACCACGCTTTCCGACCTTCTCGACGATCCCATCCCTGGTGAACTCACCAAACTCGTCCCATTTGAAGGAGATGTTAATGAATTCTCCCTCGGTGTGCAGCTTAACATTTTTGAATGCGGTGGAGTCGCTATTGGGATTTCCTTTTCCCACAAGCTTACAGATGGGTTATCTATGCTCATGTTCATCAAAGCTTGGGCTGCCACTTCCCGACGTGCCCTCGGAGATCATCAAGCTGAAATCGAGCCTCCACAGTTTGTTTCAGCAACATTCTTCCCGCCAAAGATATTCACACAACACGATGCAAGCTTTGGTATGAGAAAGAATAAAGTGACAACAAAAAGGTTTGTGTTTGATGCCGCCAACATTGAGGACCTCAGAGCAAAATATGTCGACCTAGACAAACCGTTGATCAAGCGCCCCTCGCGTGTCGAGTCCTTATCGGCTTTTCTATGGAGCCGAATAGTGGCTGCTTCGAAAGATGATGATCATGTTGACGACAAGTTGTATAGAGTGATGAATGTTGTCAATCTTCGTCCACTGTTCAATCCACCGTTGCCGCAATCTGTGTTTGGAAACCTCGTCGGGATTTCCATAACATCTCCAACATCCTCGGGGGCAGAATATTCTAGTGGTTTCATCAAGCACTCACGAGAGCAAATAAGCAACATTACCGACGACTACGTGAAAAAACTTCATCAATGTGATGAGCATTTGGGTTTTCTGGAGAGATATGCTGATGTTTATAAGAGAGGAGAGAGTACCGTGACGTCCATGTTCAGTAGTATATGCAAGTTTCCTCTGTATGACAGTGACTTTGGTTGGGGAAGACCAACGTATGTGGGCGTTCCGGCGTTCAGCTTCGCGAACACGATCGTTTTCGTCGACCCCAAAGAGGGTGGTGGAATAGAGGTCCACGTTTGCTTGAGGGAAGAGGTCATGGTTAAATTTGAAAGGGACCCCAAGTTGCTCTCACGGCTGAGTTTGAGTTCGGTTGGTTCGGGTTCAATCAAAAAACCTATTCAGACTAGATCGGTAAAGTCTGGATCGGGGGGATTTAAGGGTTTGCTCTCACGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015935 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042274 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S27e

Protein Analysis

463

Amino Acids

51.62

Weight (kDa)

6.9

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 425	1.4e-75	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001581)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45710 AT3G61110 AT3G61111 AT5G47930
fragaria_vesca	FvH4_4g22340 FvH4_4g22990
malus_domestica	MD00G1067000.v1.1 MD13G1127700.v1.1 MD13G1132700.v1.1 MD16G1127800.v1.1 MD16G1143000.v1.1
prunus_persica	Prupe.1G212900_v2.0.a1 Prupe.1G218300_v2.0.a1
pyrus_communis	pycom13g11060 pycom13g11520
rosa_chinensis	RchiOBHm_Chr3g0487351 RchiOBHm_Chr4g0428571 RchiOBHm_Chr4g0429251
rosa_laevigata	RLG00000023012
rosa_multiflora	Rmu_co8070416.1_g000001 Rmu_sc0000054.1_g000026 Rmu_sc0001955.1_g000013 Rmu_sc0033684.1_g000001
rosa_roxburghii	Rroxscaffold_5G00370280 Rroxscaffold_5G00370880 Rroxscaffold_6G00394860
rosa_rugosa	Rorug02G0097800 Rorug03G0233400 Rorug03G0255700 Rorug04G0226500 Rorug04G0234500
rosa_samantha	Rh3BG316900 Rh3CG314900 Rh3DG312800 Rh4AG284000 Rh4BG289700 Rh4CG165800 Rh4CG311600 Rh4DG119200 Rh4DG286700 Rh6CG187400 Rh7AG391000 Rh7BG331200 Rh7CG410000
rosa_wichuraiana	Rw2G037400 Rw3G024910 Rw4G024650 Rw4G025130 Rw5G025190 Rw7G017300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1056
AatII	GACGTC	1 cut(s)	1082
AccB7I	CCANNNNNTGG	1 cut(s)	236
AccI	GTMKAC	2 cut(s)	702, 1194
AccII	CGCG	2 cut(s)	736, 1175
AciI	CCGC	4 cut(s)	429, 587, 669, 869
AclWI	GGATC	2 cut(s)	332, 1363
AcoI	YGGCCR	2 cut(s)	61, 184
AcsI	RAATTY	2 cut(s)	392, 1256
AcyI	GRCGYC	1 cut(s)	1079
AfaI	GTAC	2 cut(s)	290, 1072
AfiI	CCNNNNNNNGG	7 cut(s)	59, 236, 347, 377, 775, 1204, 1205
AgsI	TTSAA	7 cut(s)	11, 296, 377, 425, 856, 1262, 1317
AjiI	CACGTC	1 cut(s)	524
AjnI	CCWGG	1 cut(s)	346
AluBI	AGCT	9 cut(s)	7, 24, 299, 412, 466, 503, 545, 618, 1170
AluI	AGCT	9 cut(s)	7, 24, 299, 412, 466, 503, 545, 618, 1170
Alw21I	GWGCWC	1 cut(s)	132
Alw26I	GTCTC	1 cut(s)	147
Alw44I	GTGCAC	1 cut(s)	128
AlwI	GGATC	2 cut(s)	332, 1363
Ama87I	CYCGRG	2 cut(s)	300, 922
AoxI	GGCC	2 cut(s)	61, 184
ApaLI	GTGCAC	1 cut(s)	128
ApeKI	GCWGC	3 cut(s)	409, 509, 779
ApoI	RAATTY	2 cut(s)	392, 1256
ArsI	GACNNNNNNTTYG	2 cut(s)	1109, 1141
AspLEI	GCGC	1 cut(s)	729
AspS9I	GGNCC	3 cut(s)	682, 1222, 1267
AsuC2I	CCSGG	1 cut(s)	60
AsuHPI	GGTGA	3 cut(s)	68, 349, 362
AsuII	TTCGAA	1 cut(s)	785
AvaI	CYCGRG	2 cut(s)	300, 922
AvaII	GGWCC	3 cut(s)	682, 1222, 1267
BaeGI	GKGCMC	2 cut(s)	132, 529
BauI	CACGAG	1 cut(s)	960
BbsI	GAAGAC	1 cut(s)	1144
Bbv12I	GWGCWC	1 cut(s)	132
BbvI	GCAGC	3 cut(s)	421, 496, 766
BccI	CCATC	6 cut(s)	52, 72, 118, 195, 350, 467
BceAI	ACGGC	1 cut(s)	1301
BciT130I	CCWGG	1 cut(s)	348
BclI	TGATCA	3 cut(s)	94, 720, 796
BcnI	CCSGG	1 cut(s)	60
BcoDI	GTCTC	1 cut(s)	147
BfaI	CTAG	4 cut(s)	171, 707, 939, 1338
BfoI	RGCGCY	1 cut(s)	730
BisI	GCNGC	5 cut(s)	410, 510, 669, 780, 869
BlsI	GCNGC	5 cut(s)	411, 511, 670, 781, 870
Bme1390I	CCNGG	2 cut(s)	60, 348
Bme18I	GGWCC	3 cut(s)	682, 1222, 1267
BmeT110I	CYCGRG	2 cut(s)	300, 922
BmgBI	CACGTC	1 cut(s)	524
BmgT120I	GGNCC	3 cut(s)	682, 1222, 1267
BmiI	GGNNCC	3 cut(s)	767, 1268, 1269
BmrFI	CCNGG	2 cut(s)	60, 348
BmsI	GCATC	2 cut(s)	601, 655
BpiI	GAAGAC	1 cut(s)	1144
BpmI	CTGGAG	1 cut(s)	1055
Bpu14I	TTCGAA	1 cut(s)	785
BpuEI	CTTGAG	2 cut(s)	176, 1255
BpuMI	CCSGG	1 cut(s)	60
BsaAI	YACGTR	1 cut(s)	994
BsaBI	GATNNNNATC	1 cut(s)	795
BsaHI	GRCGYC	1 cut(s)	1079
BsaJI	CCNNGG	7 cut(s)	27, 58, 207, 346, 400, 529, 921
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 236, 347, 377, 775, 1204, 1205
Bse3DI	GCAATG	1 cut(s)	277
Bse8I	GATNNNNATC	1 cut(s)	795
BseBI	CCWGG	1 cut(s)	348
BseDI	CCNNGG	7 cut(s)	27, 58, 207, 346, 400, 529, 921
BseGI	GGATG	3 cut(s)	110, 342, 917
BseJI	GATNNNNATC	1 cut(s)	795
BseLI	CCNNNNNNNGG	7 cut(s)	59, 236, 347, 377, 775, 1204, 1205
BseMI	GCAATG	1 cut(s)	277
BseMII	CTCAG	2 cut(s)	700, 1280
BseRI	GAGGAG	2 cut(s)	165, 1077
BseSI	GKGCMC	2 cut(s)	132, 529
BseXI	GCAGC	3 cut(s)	421, 496, 766
BsgI	GTGCAG	1 cut(s)	428
Bsh1236I	CGCG	2 cut(s)	736, 1175
Bsh1285I	CGRYCG	1 cut(s)	1185
BshFI	GGCC	2 cut(s)	63, 186
BsiEI	CGRYCG	1 cut(s)	1185
BsiHKAI	GWGCWC	1 cut(s)	132
BsiHKCI	CYCGRG	2 cut(s)	300, 922
BsiSI	CCGG	3 cut(s)	60, 183, 1160
BslFI	GGGAC	2 cut(s)	353, 1280
BslI	CCNNNNNNNGG	7 cut(s)	59, 236, 347, 377, 775, 1204, 1205
BsmAI	GTCTC	1 cut(s)	147
BsmFI	GGGAC	2 cut(s)	353, 1280
BsmI	GAATGC	1 cut(s)	431
BsnI	GGCC	2 cut(s)	63, 186
BsoBI	CYCGRG	2 cut(s)	300, 922
Bsp119I	TTCGAA	1 cut(s)	785
Bsp1286I	GDGCHC	2 cut(s)	132, 529
Bsp143I	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
Bsp68I	TCGCGA	1 cut(s)	1175
BspACI	CCGC	4 cut(s)	429, 587, 669, 869
BspANI	GGCC	2 cut(s)	63, 186
BspCNI	CTCAG	2 cut(s)	699, 1281
BspFNI	CGCG	2 cut(s)	736, 1175
BspLI	GGNNCC	3 cut(s)	767, 1268, 1269
BspPI	GGATC	2 cut(s)	332, 1363
BspT104I	TTCGAA	1 cut(s)	785
BsrDI	GCAATG	1 cut(s)	277
BssECI	CCNNGG	7 cut(s)	27, 58, 207, 346, 400, 529, 921
BssMI	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
BssNI	GRCGYC	1 cut(s)	1079
BssSI	CACGAG	1 cut(s)	960
BssT1I	CCWWGG	1 cut(s)	27
Bst2BI	CACGAG	1 cut(s)	960
Bst2UI	CCWGG	1 cut(s)	348
Bst4CI	ACNGT	6 cut(s)	564, 717, 852, 864, 1075, 1121
Bst6I	CTCTTC	1 cut(s)	1236
BstACI	GRCGYC	1 cut(s)	1079
BstBAI	YACGTR	1 cut(s)	994
BstBI	TTCGAA	1 cut(s)	785
BstC8I	GCNNGC	1 cut(s)	616
BstDEI	CTNAG	2 cut(s)	686, 1289
BstF5I	GGATG	3 cut(s)	110, 342, 917
BstFNI	CGCG	2 cut(s)	736, 1175
BstH2I	RGCGCY	1 cut(s)	730
BstHHI	GCGC	1 cut(s)	729
BstKTI	GATC	8 cut(s)	97, 340, 538, 723, 799, 1185, 1343, 1358
BstMAI	GTCTC	1 cut(s)	147
BstMBI	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
BstMCI	CGRYCG	1 cut(s)	1185
BstMWI	GCNNNNNNNGC	5 cut(s)	13, 69, 509, 733, 1285
BstNI	CCWGG	1 cut(s)	348
BstSCI	CCNGG	2 cut(s)	58, 346
BstSLI	GKGCMC	2 cut(s)	132, 529
BstUI	CGCG	2 cut(s)	736, 1175
BstV1I	GCAGC	3 cut(s)	421, 496, 766
BstV2I	GAAGAC	1 cut(s)	1144
BsuRI	GGCC	2 cut(s)	63, 186
BtrI	CACGTC	1 cut(s)	524
BtsCI	GGATG	3 cut(s)	110, 342, 917
BtsI	GCAGTG	1 cut(s)	265
BtsIMutI	CAGTG	3 cut(s)	265, 848, 1126
BtuMI	TCGCGA	1 cut(s)	1175
Cac8I	GCNNGC	1 cut(s)	616
CfoI	GCGC	1 cut(s)	729
Cfr13I	GGNCC	3 cut(s)	682, 1222, 1267
Csp6I	GTAC	2 cut(s)	289, 1071
CspCI	CAANNNNNGTGG	4 cut(s)	1131, 1166, 1189, 1224
CviAII	CATG	4 cut(s)	490, 800, 1084, 1249
CviQI	GTAC	2 cut(s)	289, 1071
DdeI	CTNAG	2 cut(s)	686, 1289
DpnI	GATC	8 cut(s)	96, 339, 537, 722, 798, 1184, 1342, 1357
DpnII	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
EaeI	YGGCCR	2 cut(s)	61, 184
Eam1104I	CTCTTC	1 cut(s)	1236
EarI	CTCTTC	1 cut(s)	1236
Eco130I	CCWWGG	1 cut(s)	27
Eco32I	GATATC	1 cut(s)	180
Eco47I	GGWCC	3 cut(s)	682, 1222, 1267
Eco88I	CYCGRG	2 cut(s)	300, 922
EcoO109I	RGGNCCY	2 cut(s)	682, 1267
EcoRI	GAATTC	1 cut(s)	392
EcoRII	CCWGG	1 cut(s)	346
EcoRV	GATATC	1 cut(s)	180
EcoT14I	CCWWGG	1 cut(s)	27
ErhI	CCWWGG	1 cut(s)	27
FaeI	CATG	4 cut(s)	493, 803, 1087, 1252
FalI	AAGNNNNNCTT	2 cut(s)	240, 272
FaqI	GGGAC	2 cut(s)	353, 1280
FatI	CATG	4 cut(s)	489, 799, 1083, 1248
FauI	CCCGC	1 cut(s)	594
FbaI	TGATCA	3 cut(s)	94, 720, 796
FblI	GTMKAC	2 cut(s)	702, 1194
Fnu4HI	GCNGC	5 cut(s)	410, 510, 669, 780, 869
FokI	GGATG	3 cut(s)	97, 329, 904
Fsp4HI	GCNGC	5 cut(s)	410, 510, 669, 780, 869
FspBI	CTAG	4 cut(s)	171, 707, 939, 1338
GlaI	GCGC	1 cut(s)	728
GluI	GCNGC	5 cut(s)	410, 510, 669, 780, 869
GsuI	CTGGAG	1 cut(s)	1055
HaeII	RGCGCY	1 cut(s)	730
HaeIII	GGCC	2 cut(s)	63, 186
HapII	CCGG	3 cut(s)	60, 183, 1160
HhaI	GCGC	1 cut(s)	729
Hin1I	GRCGYC	1 cut(s)	1079
Hin1II	CATG	4 cut(s)	493, 803, 1087, 1252
Hin6I	GCGC	1 cut(s)	727
HinP1I	GCGC	1 cut(s)	727
HincII	GTYRAC	4 cut(s)	307, 703, 805, 1195
HindII	GTYRAC	4 cut(s)	307, 703, 805, 1195
HindIII	AAGCTT	4 cut(s)	5, 464, 501, 616
HinfI	GANTC	4 cut(s)	243, 303, 435, 743
HpaII	CCGG	3 cut(s)	60, 183, 1160
HphI	GGTGA	3 cut(s)	68, 349, 362
Hpy166II	GTNNAC	9 cut(s)	130, 265, 307, 353, 703, 805, 848, 1195, 1225
Hpy188I	TCNGA	4 cut(s)	325, 533, 689, 1335
Hpy8I	GTNNAC	9 cut(s)	130, 265, 307, 353, 703, 805, 848, 1195, 1225
Hpy99I	CGWCG	5 cut(s)	338, 525, 896, 989, 1196
HpyAV	CCTTC	2 cut(s)	338, 371
HpyCH4III	ACNGT	6 cut(s)	564, 717, 852, 864, 1075, 1121
HpyCH4IV	ACGT	5 cut(s)	523, 993, 1079, 1145, 1227
HpyCH4V	TGCA	6 cut(s)	16, 130, 270, 409, 614, 1101
HpyF10VI	GCNNNNNNNGC	5 cut(s)	13, 69, 509, 733, 1285
HpyF3I	CTNAG	2 cut(s)	686, 1289
HpySE526I	ACGT	5 cut(s)	523, 993, 1079, 1145, 1227
Hsp92I	GRCGYC	1 cut(s)	1079
Hsp92II	CATG	4 cut(s)	493, 803, 1087, 1252
HspAI	GCGC	1 cut(s)	727
KflI	GGGWCCC	1 cut(s)	1267
Ksp22I	TGATCA	3 cut(s)	94, 720, 796
Kzo9I	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
LmnI	GCTCC	2 cut(s)	29, 765
LpnPI	CCDG	9 cut(s)	73, 177, 196, 222, 333, 360, 1019, 1173, 1338
Lsp1109I	GCAGC	3 cut(s)	421, 496, 766
LweI	GCATC	2 cut(s)	601, 655
MaeI	CTAG	4 cut(s)	171, 707, 939, 1338
MaeII	ACGT	5 cut(s)	523, 993, 1079, 1145, 1227
MaeIII	GTNAC	3 cut(s)	640, 1075, 1121
MalI	GATC	8 cut(s)	96, 339, 537, 722, 798, 1184, 1342, 1357
MboI	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
MboII	GAAGA	6 cut(s)	39, 59, 574, 833, 1149, 1253
MhlI	GDGCHC	2 cut(s)	132, 529
MluCI	AATT	2 cut(s)	392, 1256
MlyI	GAGTC	4 cut(s)	237, 312, 444, 752
MmeI	TCCRAC	3 cut(s)	77, 348, 938
MseI	TTAA	5 cut(s)	215, 387, 414, 1254, 1368
MslI	CAYNNNNRTG	3 cut(s)	135, 270, 1011
MspI	CCGG	3 cut(s)	60, 183, 1160
MspR9I	CCNGG	2 cut(s)	60, 348
Mva1269I	GAATGC	1 cut(s)	431
MvaI	CCWGG	1 cut(s)	348
MvnI	CGCG	2 cut(s)	736, 1175
MwoI	GCNNNNNNNGC	5 cut(s)	13, 69, 509, 733, 1285
NciI	CCSGG	1 cut(s)	60
NdeII	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
NlaIII	CATG	4 cut(s)	493, 803, 1087, 1252
NlaIV	GGNNCC	3 cut(s)	767, 1268, 1269
NmeAIII	GCCGAG	1 cut(s)	232
NmuCI	GTSAC	3 cut(s)	640, 1075, 1121
NruI	TCGCGA	1 cut(s)	1175
NspV	TTCGAA	1 cut(s)	785
PaeR7I	CTCGAG	1 cut(s)	300
PcsI	WCGNNNNNNNCGW	1 cut(s)	1191
PctI	GAATGC	1 cut(s)	431
PflMI	CCANNNNNTGG	1 cut(s)	236
PkrI	GCNGC	5 cut(s)	411, 511, 670, 781, 870
Ple19I	CGATCG	1 cut(s)	1185
PleI	GAGTC	4 cut(s)	237, 311, 443, 751
PpsI	GAGTC	4 cut(s)	237, 311, 443, 751
Ppu21I	YACGTR	1 cut(s)	994
PpuMI	RGGWCCY	2 cut(s)	682, 1267
PsiI	TTATAA	1 cut(s)	1056
Psp5II	RGGWCCY	2 cut(s)	682, 1267
Psp6I	CCWGG	1 cut(s)	346
PspGI	CCWGG	1 cut(s)	346
PspN4I	GGNNCC	3 cut(s)	767, 1268, 1269
PspPI	GGNCC	3 cut(s)	682, 1222, 1267
PspPPI	RGGWCCY	2 cut(s)	682, 1267
PspXI	VCTCGAGB	1 cut(s)	300
PvuI	CGATCG	1 cut(s)	1185
RruI	TCGCGA	1 cut(s)	1175
RsaI	GTAC	2 cut(s)	290, 1072
RsaNI	GTAC	2 cut(s)	289, 1071
RseI	CAYNNNNRTG	3 cut(s)	135, 270, 1011
SalI	GTCGAC	2 cut(s)	701, 1193
SaqAI	TTAA	5 cut(s)	215, 387, 414, 1254, 1368
SatI	GCNGC	5 cut(s)	410, 510, 669, 780, 869
Sau3AI	GATC	8 cut(s)	94, 337, 535, 720, 796, 1182, 1340, 1355
Sau96I	GGNCC	3 cut(s)	682, 1222, 1267
SchI	GAGTC	4 cut(s)	237, 312, 444, 752
ScrFI	CCNGG	2 cut(s)	60, 348
SduI	GDGCHC	2 cut(s)	132, 529
SfaNI	GCATC	2 cut(s)	601, 655
Sfr274I	CTCGAG	1 cut(s)	300
SfuI	TTCGAA	1 cut(s)	785
SinI	GGWCC	3 cut(s)	682, 1222, 1267
SlaI	CTCGAG	1 cut(s)	300
SmiMI	CAYNNNNRTG	3 cut(s)	135, 270, 1011
SmlI	CTYRAG	3 cut(s)	191, 300, 1234
SmoI	CTYRAG	3 cut(s)	191, 300, 1234
Sse9I	AATT	2 cut(s)	392, 1256
SsiI	CCGC	4 cut(s)	429, 587, 669, 869
SspI	AATATT	1 cut(s)	935
SspMI	CTAG	4 cut(s)	171, 707, 939, 1338
StyD4I	CCNGG	2 cut(s)	58, 346
StyI	CCWWGG	1 cut(s)	27
TaaI	ACNGT	6 cut(s)	564, 717, 852, 864, 1075, 1121
TaiI	ACGT	5 cut(s)	526, 996, 1082, 1148, 1230
TaqI	TCGA	7 cut(s)	301, 333, 552, 702, 741, 785, 1194
TasI	AATT	2 cut(s)	392, 1256
TauI	GCSGC	2 cut(s)	671, 871
Tru1I	TTAA	5 cut(s)	215, 387, 414, 1254, 1368
Tru9I	TTAA	5 cut(s)	215, 387, 414, 1254, 1368
TscAI	CASTG	3 cut(s)	272, 855, 1126
TseFI	GTSAC	3 cut(s)	640, 1075, 1121
TseI	GCWGC	3 cut(s)	409, 509, 779
Tsp45I	GTSAC	3 cut(s)	640, 1075, 1121
TspDTI	ATGAA	7 cut(s)	17, 153, 405, 484, 842, 937, 995
TspRI	CASTG	3 cut(s)	272, 855, 1126
Van91I	CCANNNNNTGG	1 cut(s)	236
VneI	GTGCAC	1 cut(s)	128
VpaK11BI	GGWCC	3 cut(s)	682, 1222, 1267
XapI	RAATTY	2 cut(s)	392, 1256
XhoI	CTCGAG	1 cut(s)	300
XmiI	GTMKAC	2 cut(s)	702, 1194
XspI	CTAG	4 cut(s)	171, 707, 939, 1338
ZraI	GACGTC	1 cut(s)	1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.