Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0008160

Physical Location & Seq

Genomic Coordinates Reverse (-)

13750758 .. 13759243

Gene Structure 8486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0088700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGGGAGTAAAAGCAAGAGGAAGAAGCAATTGCCGGAATCGAGCGACGATGATTCACCGTCGTCGTCTCCTTCAAGCTCTGACGATTCCGACCGCTCCTCGAAACGGCGTCGTCGCCACCGTCACAGAAGCGACGACGGCTCCAGAAGAGAGAAAGAAAGGAGAAGGGAGAAGAGAGAGAAACGGCGAAGTAAGAGAGAGGCGAGGCGGAGCAAATCGAAGACCAAGACGAAGACGAAGAAGAAGAAGAAGAGGGACTATGACTCCGGTTCGGGGTCTTCGAGTGGTGGCGGTGATTCTGAGCCGGAGAGGAGCCGGATTGAGCCGCAAGAGGTTTTGCGAGACTTGTTCAGTGAATTTCCTAATGTTGGCGACGATTTGAAGCAGCTTTTGCAAATGATTGATAGTGGGCAAGCAGTTGATATAAAGGGAATATCTGAAAGATCTTTGATTAAGCATCTAAAGAAGTTATTCCTTTCATTAGAACTCAAGGAAAGTGATGGAGTTTTTGTACTGCCTTCAAATGTTCGTCCCACCTTGGAGGTTGTTGGGGTCATGATTCCAGTGTCTGTAGATCTTAAATCTTCATTAAATGAGATGCATTCAGAACAATGGGATCAGGAATACAAACAAGTGGTTGGTGATGATAATATGGCATCGCCATGTCCGGAGGATAATGTTGCTGGTCCTAACAGAAGGGTAATTGGCCCTGCAATGCCATCGGCCGAGCTACTTGCTGCTGCAGCCAAACTGACAGAGGCACATGCCGAGCTCAGGGAAGTGGAGTTGGAAGAGGATGCTGGAATGTTTATAGGGCCTCCACCACCTGCTGTTGTTGCTGAAGTTGAATCAGCTAATGAAGCTGAACGGTTTGAAGAGGTCACGAGGATCATAGATGCTGAGGAGAATAGTCCATATGATGTTCTAGGAGCAAACCAAAATATGGCTCCTGAGAACATAAAGAAAAGGTACTGGAAGATGTCTCTTTTGGTGCACCCTGATAAATGCTCACATCCTCAAGCTCAACAAGCATTTGTCAAGTTGAACAAAGCTTTTAAAGATTTACAAGATCCAGAAAAGCGGAAAGTGCTAGATGAGAAGATTAAACTCAAGGAGGAGCATGAGAAATTTAAGGTGGAGTTGCGAGCAATGCGGGAGGCTGCACAATGGAGAAAGTTACAAGGAATATCCATGGAGGGTGATGATGAGCTATTGGCAGACATGGATGTTAAAGTGGCACCACAAAGAGATGAGTGGATGACAACGCTTCCTCCTGAGAGGAGACCTGGTGGTATGCCTACACAGTCAACAAAGTTTAGCAGCACCGTTAAAGAAGGACGTGGTGATACTAGTGCATGGACTGATACCCCTTCTGACAGAGCCCAGAAAGCTAAGATGGATTACTTAGAAGCATATAATGAGGCTGCATCACTTGCTTCAAATGAGGAGAAGAAAATGAATAGTTCAGATGCAGATTTGGTGGACAGATACAACAAAGAAAAACGATCAAAATCATTGGTACAAAAACACCAAGAGACTGCAAGCCGCCCGAAGAGAAAATCCAAGCAACCGTTGGAGAAGGAGAAGAAGGAAGAATGGGTGGGAAAACATCCTTGGAAGCCTTGGGACCGTGAAAAGGATTTGACAGGCGGTAGGCAAAGTGTAAAATTGGATTCAGAAAACATGGCTCAAGGTTTAACGTCTCGGTTTTCTGCGGGCTCCTTTCAGAGAAACTTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

580

Amino Acids

65.9

Weight (kDa)

8.97

Isoelectric Point (pI)

67.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	305 - 365	4.3e-17	DnaJ domain
DUF3752	PF12572	424 - 571	4.7e-28	Protein of unknown function (DUF3752)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008160)

Species	Orthologous Gene IDs
malus_domestica	MD07G1063200.v1.1
pyrus_communis	pycom02g21820 pycom02g21840
rosa_chinensis	RchiOBHm_Chr3g0470181
rosa_laevigata	RLG00000008106 RLG00000029152 RLG00000031580 RLG00000034936
rosa_multiflora	Rmu_co8301435.1_g000001 Rmu_co8456623.1_g000001 Rmu_sc0002799.1_g000014 Rmu_sc0014039.1_g000005
rosa_roxburghii	Rroxscaffold_3G00272930
rosa_rugosa	Rorug02G0162400 Rorug04G0088700
rosa_samantha	Rh1AG124000 Rh2BG466300 Rh3BG244000 Rh3CG171600 Rh4AG140600 Rh5BG342900 Rh5CG369900 Rh6AG182300 Rh7BG390200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	835
Acc36I	ACCTGC	1 cut(s)	835
AccB1I	GGYRCC	1 cut(s)	1237
AccB7I	CCANNNNNTGG	1 cut(s)	943
AccBSI	CCGCTC	1 cut(s)	96
AccIII	TCCGGA	1 cut(s)	667
AciI	CCGC	9 cut(s)	94, 208, 291, 326, 1081, 1153, 1546, 1650, 1715
AclWI	GGATC	3 cut(s)	624, 896, 1064
AcoI	YGGCCR	1 cut(s)	723
AcsI	RAATTY	2 cut(s)	356, 1127
AcuI	CTGAAG	1 cut(s)	861
AcyI	GRCGYC	1 cut(s)	109
AfaI	GTAC	3 cut(s)	513, 971, 1521
AfiI	CCNNNNNNNGG	6 cut(s)	105, 273, 368, 774, 943, 1636
AgsI	TTSAA	7 cut(s)	75, 382, 522, 848, 875, 1045, 1440
AhlI	ACTAGT	1 cut(s)	1349
AjiI	CACGTC	1 cut(s)	1340
AjnI	CCWGG	1 cut(s)	1285
AjuI	GAANNNNNNNTTGG	2 cut(s)	1597, 1629
Alw21I	GWGCWC	2 cut(s)	774, 996
Alw26I	GTCTC	6 cut(s)	72, 336, 987, 1276, 1529, 1707
Alw44I	GTGCAC	1 cut(s)	992
AlwI	GGATC	3 cut(s)	624, 896, 1064
AlwNI	CAGNNNCTG	1 cut(s)	569
Aor13HI	TCCGGA	1 cut(s)	667
AoxI	GGCC	3 cut(s)	706, 723, 815
ApaLI	GTGCAC	1 cut(s)	992
ApeKI	GCWGC	7 cut(s)	385, 737, 740, 743, 1160, 1320, 1424
ApoI	RAATTY	2 cut(s)	356, 1127
Asp700I	GAANNNNTTC	1 cut(s)	470
AspS9I	GGNCC	4 cut(s)	686, 707, 815, 1627
AsuHPI	GGTGA	5 cut(s)	48, 305, 653, 1211, 1355
AvaII	GGWCC	2 cut(s)	686, 1627
BaeGI	GKGCMC	1 cut(s)	996
BanI	GGYRCC	1 cut(s)	1237
BanII	GRGCYC	3 cut(s)	774, 1384, 1721
BauI	CACGAG	1 cut(s)	883
BbsI	GAAGAC	3 cut(s)	227, 239, 270
Bbv12I	GWGCWC	2 cut(s)	774, 996
BbvCI	CCTCAGC	1 cut(s)	900
BbvI	GCAGC	7 cut(s)	397, 724, 727, 755, 1147, 1332, 1411
BccI	CCATC	3 cut(s)	494, 727, 1390
BceAI	ACGGC	3 cut(s)	122, 154, 200
BcgI	CGANNNNNNTGC	4 cut(s)	702, 716, 736, 750
BciT130I	CCWGG	1 cut(s)	1287
BcoDI	GTCTC	6 cut(s)	72, 336, 987, 1276, 1529, 1707
BcuI	ACTAGT	1 cut(s)	1349
BfaI	CTAG	3 cut(s)	926, 1091, 1350
BfmI	CTRYAG	2 cut(s)	570, 741
BfuAI	ACCTGC	1 cut(s)	835
BglII	AGATCT	2 cut(s)	443, 574
BisI	GCNGC	9 cut(s)	326, 386, 738, 741, 744, 1161, 1321, 1425, 1546
BlsI	GCNGC	9 cut(s)	327, 387, 739, 742, 745, 1162, 1322, 1426, 1547
Bme1390I	CCNGG	1 cut(s)	1287
Bme18I	GGWCC	2 cut(s)	686, 1627
BmgBI	CACGTC	1 cut(s)	1340
BmgT120I	GGNCC	4 cut(s)	686, 707, 815, 1627
BmiI	GGNNCC	6 cut(s)	142, 314, 948, 1239, 1628, 1720
BmrFI	CCNGG	1 cut(s)	1287
BmsI	GCATC	7 cut(s)	466, 588, 665, 787, 886, 1436, 1459
BpiI	GAAGAC	3 cut(s)	227, 239, 270
BpmI	CTGGAG	1 cut(s)	127
Bpu10I	CCTNAGC	2 cut(s)	773, 900
BpuEI	CTTGAG	4 cut(s)	473, 1002, 1094, 1674
BsaBI	GATNNNNATC	1 cut(s)	1510
BsaHI	GRCGYC	1 cut(s)	109
BsaI	GGTCTC	1 cut(s)	1276
BsaJI	CCNNGG	4 cut(s)	537, 1191, 1613, 1622
BsaWI	WCCGGW	2 cut(s)	266, 667
Bsc4I	CCNNNNNNNGG	6 cut(s)	105, 273, 368, 774, 943, 1636
Bse1I	ACTGG	2 cut(s)	563, 977
Bse3DI	GCAATG	2 cut(s)	720, 1155
Bse8I	GATNNNNATC	1 cut(s)	1510
BseAI	TCCGGA	1 cut(s)	667
BseBI	CCWGG	1 cut(s)	1287
BseDI	CCNNGG	4 cut(s)	537, 1191, 1613, 1622
BseGI	GGATG	5 cut(s)	802, 1012, 1231, 1263, 1609
BseJI	GATNNNNATC	1 cut(s)	1510
BseLI	CCNNNNNNNGG	6 cut(s)	105, 273, 368, 774, 943, 1636
BseMI	GCAATG	2 cut(s)	720, 1155
BseMII	CTCAG	5 cut(s)	291, 787, 891, 942, 1266
BseNI	ACTGG	2 cut(s)	563, 977
BseRI	GAGGAG	6 cut(s)	88, 325, 917, 1130, 1294, 1460
BseSI	GKGCMC	1 cut(s)	996
BseX3I	CGGCCG	1 cut(s)	723
BseXI	GCAGC	7 cut(s)	397, 724, 727, 755, 1147, 1332, 1411
BsgI	GTGCAG	1 cut(s)	1146
Bsh1285I	CGRYCG	2 cut(s)	94, 726
BshFI	GGCC	3 cut(s)	708, 725, 817
BshNI	GGYRCC	1 cut(s)	1237
BsiEI	CGRYCG	2 cut(s)	94, 726
BsiHKAI	GWGCWC	2 cut(s)	774, 996
BsiSI	CCGG	5 cut(s)	35, 267, 305, 316, 668
BslFI	GGGAC	3 cut(s)	269, 516, 1640
BslI	CCNNNNNNNGG	6 cut(s)	105, 273, 368, 774, 943, 1636
BsmAI	GTCTC	6 cut(s)	72, 336, 987, 1276, 1529, 1707
BsmBI	CGTCTC	2 cut(s)	72, 1707
BsmFI	GGGAC	3 cut(s)	269, 516, 1640
BsmI	GAATGC	1 cut(s)	601
BsnI	GGCC	3 cut(s)	708, 725, 817
Bso31I	GGTCTC	1 cut(s)	1276
Bsp1286I	GDGCHC	4 cut(s)	774, 996, 1384, 1721
Bsp13I	TCCGGA	1 cut(s)	667
Bsp143I	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
Bsp19I	CCATGG	1 cut(s)	1191
BspACI	CCGC	9 cut(s)	94, 208, 291, 326, 1081, 1153, 1546, 1650, 1715
BspANI	GGCC	3 cut(s)	708, 725, 817
BspCNI	CTCAG	5 cut(s)	292, 786, 892, 943, 1267
BspEI	TCCGGA	1 cut(s)	667
BspHI	TCATGA	1 cut(s)	555
BspLI	GGNNCC	6 cut(s)	142, 314, 948, 1239, 1628, 1720
BspMAI	CTGCAG	1 cut(s)	745
BspMI	ACCTGC	1 cut(s)	835
BspPI	GGATC	3 cut(s)	624, 896, 1064
BspT107I	GGYRCC	1 cut(s)	1237
BspTNI	GGTCTC	1 cut(s)	1276
BsrBI	CCGCTC	1 cut(s)	96
BsrDI	GCAATG	2 cut(s)	720, 1155
BsrI	ACTGG	2 cut(s)	563, 977
BssECI	CCNNGG	4 cut(s)	537, 1191, 1613, 1622
BssMI	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
BssNI	GRCGYC	1 cut(s)	109
BssSI	CACGAG	1 cut(s)	883
BssT1I	CCWWGG	4 cut(s)	537, 1191, 1613, 1622
Bst2BI	CACGAG	1 cut(s)	883
Bst2UI	CCWGG	1 cut(s)	1287
Bst4CI	ACNGT	7 cut(s)	60, 122, 870, 1305, 1327, 1572, 1631
Bst6I	CTCTTC	6 cut(s)	142, 167, 245, 786, 870, 1547
BstACI	GRCGYC	1 cut(s)	109
BstAPI	GCANNNNNTGC	2 cut(s)	391, 1433
BstC8I	GCNNGC	4 cut(s)	414, 1146, 1543, 1717
BstDEI	CTNAG	7 cut(s)	300, 773, 900, 951, 1275, 1392, 1405
BstDSI	CCRYGG	1 cut(s)	1191
BstF5I	GGATG	5 cut(s)	802, 1012, 1231, 1263, 1609
BstKTI	GATC	6 cut(s)	446, 577, 619, 891, 1072, 1508
BstMAI	GTCTC	6 cut(s)	72, 336, 987, 1276, 1529, 1707
BstMBI	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
BstMCI	CGRYCG	2 cut(s)	94, 726
BstNI	CCWGG	1 cut(s)	1287
BstNSI	RCATGY	1 cut(s)	767
BstSCI	CCNGG	1 cut(s)	1285
BstSFI	CTRYAG	2 cut(s)	570, 741
BstSLI	GKGCMC	1 cut(s)	996
BstV1I	GCAGC	7 cut(s)	397, 724, 727, 755, 1147, 1332, 1411
BstV2I	GAAGAC	3 cut(s)	227, 239, 270
BstX2I	RGATCY	3 cut(s)	443, 574, 1069
BstYI	RGATCY	3 cut(s)	443, 574, 1069
BstZI	CGGCCG	1 cut(s)	723
BsuRI	GGCC	3 cut(s)	708, 725, 817
BtgI	CCRYGG	1 cut(s)	1191
BtgZI	GCGATG	1 cut(s)	642
BtrI	CACGTC	1 cut(s)	1340
BtsCI	GGATG	5 cut(s)	802, 1012, 1231, 1263, 1609
BtsIMutI	CAGTG	2 cut(s)	358, 570
BveI	ACCTGC	1 cut(s)	835
Cac8I	GCNNGC	4 cut(s)	414, 1146, 1543, 1717
CaiI	CAGNNNCTG	1 cut(s)	569
CciI	TCATGA	1 cut(s)	555
Cfr13I	GGNCC	4 cut(s)	686, 707, 815, 1627
CseI	GACGC	1 cut(s)	98
CsiI	ACCWGGT	1 cut(s)	1285
Csp6I	GTAC	3 cut(s)	512, 970, 1520
CviAII	CATG	8 cut(s)	556, 663, 764, 1121, 1192, 1222, 1356, 1684
CviQI	GTAC	3 cut(s)	512, 970, 1520
DdeI	CTNAG	7 cut(s)	300, 773, 900, 951, 1275, 1392, 1405
DpnI	GATC	6 cut(s)	445, 576, 618, 890, 1071, 1507
DpnII	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
DraI	TTTAAA	1 cut(s)	1057
EaeI	YGGCCR	1 cut(s)	723
EagI	CGGCCG	1 cut(s)	723
Eam1104I	CTCTTC	6 cut(s)	142, 167, 245, 786, 870, 1547
EarI	CTCTTC	6 cut(s)	142, 167, 245, 786, 870, 1547
EciI	GGCGGA	1 cut(s)	223
Ecl136II	GAGCTC	1 cut(s)	772
EclXI	CGGCCG	1 cut(s)	723
Eco130I	CCWWGG	4 cut(s)	537, 1191, 1613, 1622
Eco24I	GRGCYC	3 cut(s)	774, 1384, 1721
Eco31I	GGTCTC	1 cut(s)	1276
Eco47I	GGWCC	2 cut(s)	686, 1627
Eco52I	CGGCCG	1 cut(s)	723
Eco53kI	GAGCTC	1 cut(s)	772
Eco57I	CTGAAG	1 cut(s)	861
EcoICRI	GAGCTC	1 cut(s)	772
EcoO109I	RGGNCCY	1 cut(s)	815
EcoRII	CCWGG	1 cut(s)	1285
EcoT14I	CCWWGG	4 cut(s)	537, 1191, 1613, 1622
EcoT22I	ATGCAT	1 cut(s)	603
EcoT38I	GRGCYC	3 cut(s)	774, 1384, 1721
ErhI	CCWWGG	4 cut(s)	537, 1191, 1613, 1622
Esp3I	CGTCTC	2 cut(s)	72, 1707
FaeI	CATG	8 cut(s)	559, 666, 767, 1124, 1195, 1225, 1359, 1687
FaqI	GGGAC	3 cut(s)	269, 516, 1640
FatI	CATG	8 cut(s)	555, 662, 763, 1120, 1191, 1221, 1355, 1683
FauI	CCCGC	2 cut(s)	1146, 1708
FauNDI	CATATG	1 cut(s)	916
Fnu4HI	GCNGC	9 cut(s)	326, 386, 738, 741, 744, 1161, 1321, 1425, 1546
FokI	GGATG	5 cut(s)	809, 999, 1238, 1270, 1596
FriOI	GRGCYC	3 cut(s)	774, 1384, 1721
Fsp4HI	GCNGC	9 cut(s)	326, 386, 738, 741, 744, 1161, 1321, 1425, 1546
FspBI	CTAG	3 cut(s)	926, 1091, 1350
GluI	GCNGC	9 cut(s)	326, 386, 738, 741, 744, 1161, 1321, 1425, 1546
GsuI	CTGGAG	1 cut(s)	127
HaeIII	GGCC	3 cut(s)	708, 725, 817
HapII	CCGG	5 cut(s)	35, 267, 305, 316, 668
HgaI	GACGC	1 cut(s)	98
Hin1I	GRCGYC	1 cut(s)	109
Hin1II	CATG	8 cut(s)	559, 666, 767, 1124, 1195, 1225, 1359, 1687
HincII	GTYRAC	1 cut(s)	1308
HindII	GTYRAC	1 cut(s)	1308
HindIII	AAGCTT	1 cut(s)	1050
HinfI	GANTC	8 cut(s)	38, 53, 86, 263, 296, 559, 848, 1673
HpaII	CCGG	5 cut(s)	35, 267, 305, 316, 668
HphI	GGTGA	5 cut(s)	48, 305, 653, 1211, 1355
Hpy166II	GTNNAC	3 cut(s)	994, 1308, 1483
Hpy188I	TCNGA	9 cut(s)	82, 91, 301, 439, 607, 1375, 1468, 1678, 1728
Hpy188III	TCNNGA	8 cut(s)	144, 556, 620, 668, 883, 950, 1073, 1274
Hpy8I	GTNNAC	3 cut(s)	994, 1308, 1483
Hpy99I	CGWCG	8 cut(s)	50, 64, 67, 114, 117, 137, 140, 377
HpyAV	CCTTC	8 cut(s)	81, 159, 528, 690, 1328, 1380, 1573, 1582
HpyCH4III	ACNGT	7 cut(s)	60, 122, 870, 1305, 1327, 1572, 1631
HpyCH4IV	ACGT	2 cut(s)	1339, 1700
HpyF3I	CTNAG	7 cut(s)	300, 773, 900, 951, 1275, 1392, 1405
HpySE526I	ACGT	2 cut(s)	1339, 1700
Hsp92I	GRCGYC	1 cut(s)	109
Hsp92II	CATG	8 cut(s)	559, 666, 767, 1124, 1195, 1225, 1359, 1687
Kpn2I	TCCGGA	1 cut(s)	667
Kzo9I	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
LmnI	GCTCC	8 cut(s)	101, 146, 210, 312, 929, 952, 1117, 1724
Lsp1109I	GCAGC	7 cut(s)	397, 724, 727, 755, 1147, 1332, 1411
LweI	GCATC	7 cut(s)	466, 588, 665, 787, 886, 1436, 1459
MabI	ACCWGGT	1 cut(s)	1285
MaeI	CTAG	3 cut(s)	926, 1091, 1350
MaeII	ACGT	2 cut(s)	1339, 1700
MaeIII	GTNAC	3 cut(s)	122, 880, 1176
MalI	GATC	6 cut(s)	445, 576, 618, 890, 1071, 1507
MbiI	CCGCTC	1 cut(s)	96
MboI	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
MfeI	CAATTG	1 cut(s)	29
MflI	RGATCY	3 cut(s)	443, 574, 1069
MhlI	GDGCHC	4 cut(s)	774, 996, 1384, 1721
MluCI	AATT	5 cut(s)	29, 356, 702, 1127, 1667
MlyI	GAGTC	1 cut(s)	257
MmeI	TCCRAC	3 cut(s)	114, 768, 1554
Mph1103I	ATGCAT	1 cut(s)	603
MroI	TCCGGA	1 cut(s)	667
MroXI	GAANNNNTTC	1 cut(s)	470
MseI	TTAA	9 cut(s)	453, 579, 590, 1056, 1104, 1131, 1230, 1329, 1697
MslI	CAYNNNNRTG	1 cut(s)	661
MspI	CCGG	5 cut(s)	35, 267, 305, 316, 668
MspR9I	CCNGG	1 cut(s)	1287
MunI	CAATTG	1 cut(s)	29
Mva1269I	GAATGC	1 cut(s)	601
MvaI	CCWGG	1 cut(s)	1287
NcoI	CCATGG	1 cut(s)	1191
NdeI	CATATG	1 cut(s)	916
NdeII	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
NlaIII	CATG	8 cut(s)	559, 666, 767, 1124, 1195, 1225, 1359, 1687
NlaIV	GGNNCC	6 cut(s)	142, 314, 948, 1239, 1628, 1720
NmeAIII	GCCGAG	2 cut(s)	751, 793
NmuCI	GTSAC	2 cut(s)	122, 880
NsiI	ATGCAT	1 cut(s)	603
NspI	RCATGY	1 cut(s)	767
PagI	TCATGA	1 cut(s)	555
PaqCI	CACCTGC	1 cut(s)	835
PcsI	WCGNNNNNNNCGW	2 cut(s)	118, 278
PctI	GAATGC	1 cut(s)	601
PdmI	GAANNNNTTC	1 cut(s)	470
PfeI	GAWTC	7 cut(s)	38, 53, 86, 296, 559, 848, 1673
PflMI	CCANNNNNTGG	1 cut(s)	943
PkrI	GCNGC	9 cut(s)	327, 387, 739, 742, 745, 1162, 1322, 1426, 1547
PleI	GAGTC	1 cut(s)	257
PpsI	GAGTC	1 cut(s)	257
Psp124BI	GAGCTC	1 cut(s)	774
Psp6I	CCWGG	1 cut(s)	1285
PspGI	CCWGG	1 cut(s)	1285
PspN4I	GGNNCC	6 cut(s)	142, 314, 948, 1239, 1628, 1720
PspPI	GGNCC	4 cut(s)	686, 707, 815, 1627
PstI	CTGCAG	1 cut(s)	745
PstNI	CAGNNNCTG	1 cut(s)	569
PsuI	RGATCY	3 cut(s)	443, 574, 1069
RsaI	GTAC	3 cut(s)	513, 971, 1521
RsaNI	GTAC	3 cut(s)	512, 970, 1520
RseI	CAYNNNNRTG	1 cut(s)	661
SacI	GAGCTC	1 cut(s)	774
SaqAI	TTAA	9 cut(s)	453, 579, 590, 1056, 1104, 1131, 1230, 1329, 1697
SatI	GCNGC	9 cut(s)	326, 386, 738, 741, 744, 1161, 1321, 1425, 1546
Sau3AI	GATC	6 cut(s)	443, 574, 616, 888, 1069, 1505
Sau96I	GGNCC	4 cut(s)	686, 707, 815, 1627
SchI	GAGTC	1 cut(s)	257
ScrFI	CCNGG	1 cut(s)	1287
SduI	GDGCHC	4 cut(s)	774, 996, 1384, 1721
SexAI	ACCWGGT	1 cut(s)	1285
SfaNI	GCATC	7 cut(s)	466, 588, 665, 787, 886, 1436, 1459
SfcI	CTRYAG	2 cut(s)	570, 741
SinI	GGWCC	2 cut(s)	686, 1627
SmiMI	CAYNNNNRTG	1 cut(s)	661
SmlI	CTYRAG	4 cut(s)	488, 1017, 1109, 1689
SmoI	CTYRAG	4 cut(s)	488, 1017, 1109, 1689
SpeI	ACTAGT	1 cut(s)	1349
Sse9I	AATT	5 cut(s)	29, 356, 702, 1127, 1667
SsiI	CCGC	9 cut(s)	94, 208, 291, 326, 1081, 1153, 1546, 1650, 1715
SspMI	CTAG	3 cut(s)	926, 1091, 1350
SstI	GAGCTC	1 cut(s)	774
StyD4I	CCNGG	1 cut(s)	1285
StyI	CCWWGG	4 cut(s)	537, 1191, 1613, 1622
TaaI	ACNGT	7 cut(s)	60, 122, 870, 1305, 1327, 1572, 1631
TaiI	ACGT	2 cut(s)	1342, 1703
TaqI	TCGA	4 cut(s)	41, 101, 218, 281
TasI	AATT	5 cut(s)	29, 356, 702, 1127, 1667
TatI	WGTACW	1 cut(s)	511
TauI	GCSGC	2 cut(s)	328, 1548
TfiI	GAWTC	7 cut(s)	38, 53, 86, 296, 559, 848, 1673
Tru1I	TTAA	9 cut(s)	453, 579, 590, 1056, 1104, 1131, 1230, 1329, 1697
Tru9I	TTAA	9 cut(s)	453, 579, 590, 1056, 1104, 1131, 1230, 1329, 1697
TscAI	CASTG	2 cut(s)	358, 570
TseFI	GTSAC	2 cut(s)	122, 880
TseI	GCWGC	7 cut(s)	385, 737, 740, 743, 1160, 1320, 1424
Tsp45I	GTSAC	2 cut(s)	122, 880
TspDTI	ATGAA	4 cut(s)	468, 576, 873, 1472
TspRI	CASTG	2 cut(s)	358, 570
Van91I	CCANNNNNTGG	1 cut(s)	943
VneI	GTGCAC	1 cut(s)	992
VpaK11BI	GGWCC	2 cut(s)	686, 1627
XapI	RAATTY	2 cut(s)	356, 1127
XceI	RCATGY	1 cut(s)	767
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1570
XmnI	GAANNNNTTC	1 cut(s)	470
XspI	CTAG	3 cut(s)	926, 1091, 1350
Zsp2I	ATGCAT	1 cut(s)	603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.