Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002723

Physical Location & Seq

Genomic Coordinates Forward (+)

1203963 .. 1208108

Gene Structure 4146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0017900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGGTGACGATGACGAAGAAGACGTCGCCACCGCCAATCACGGCGCGCCACGTGATCAGGTCCAGCTGGAAGCTTCTGATCGTCTTCTCCGTCTTGCTCTGCGTTTTGGCTCTCTACAGGTTTCAGTCTCAGCAGCCAGACCTTTACTCTCCTTCTTCTTCATTATCTCGCGCGAGATCTCGAATTTCTCGCCACAGCGTCAGCTTCGCCGGCCCCGCCAAGATCGCCTTCCTATTTCTCGCGCGACGTGACCTCCCGCTCGATTTTCTGTGGGAGAGCTTCTTCGAGAATGCCGGTGGCGCTTTGAATTTTTCGATTTATATTCACTCCGCGCCTGGTTTTGTGTTCGATGAGTCCACCACGAGGTCTCGCTTCTTTCACGGCCGTCAATTGCCGAATAGCATACAGGTGGGATGGGGAGAATCAAGCATGATTGAAGCGGAGAGGTTGTTGTTTGCGACAGCTCTTGAGGATCCAGCAAATCAAAGACTTGTTCTCCTCTCCGACAGTTGCGTTCCTTTGTACAACTTCAGCTTCATATACAATTACCTGATGGCTTCTCCTAGGAGTATTGTGGACAGCTTCCTGGATGTGAAGGAGGGCCGCTACAACCCAAAAATGTCACCCACAATACCGAAAGCCAAATGGCGGAAAGGATCACAGTGGATTGCTTTGATTCGGAGACACGCCGAAGTTCTTGTGGATGATGAAGTTATACTTCCGGTATTCAAAAAGTTTTGCAGGCGTCGCCCACCTGTTGATATCAGAAAGGGGAAGCTGAATCTTAAACTTCAGAAACAGCACAACTGTATCCCAGACGAACACTATGTGCAGACGCTGCTTGCGATGAGTGAGCTTGACGGCGAACTTGAGCGAAGGACATTAACCTATACATTGTGGAGCAACTCTCCAAATAAAACAGAGAGTAAAGGCTGGCATCCTATGACTTTCAACCATGCCAATGCGGCCCCTCAAAAGATAAGGGCAATAAAGGAGATCAGCCATGTATACTATGAGACAGAATTCCGAACAGAATGGTGCCGTATAAATTCAACTGCAGTTCCCTGTTTTTTGTTCGCAAGGAAGTTCTCCAAGGGTGCTGCAATGCGCCTTCTGAGCGAGGGAGTTGTTGGTCACTTTAACACAGCCACATTGTTAAAACCATCACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003973 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005829 GO:0005840 GO:0005911 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008891 GO:0009058 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009735 GO:0009853 GO:0009987 GO:0010033 GO:0010109 GO:0016020 GO:0016032 GO:0016491 GO:0016614 GO:0016899 GO:0016999 GO:0017000 GO:0017144 GO:0019048 GO:0019222 GO:0022626 GO:0030054 GO:0031323 GO:0032991 GO:0035821 GO:0042221 GO:0042579 GO:0042742 GO:0042743 GO:0043094 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044003 GO:0044237 GO:0044249 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0048046 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0055044 GO:0055114 GO:0065007 GO:0072593 GO:0098542 GO:1903409 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00630 ko01100 ko01110 ko01120 ko01130 ko01200 ko04146 map00630 map01100 map01110 map01120 map01130 map01200 map04146

Pfam Domains

Protein Families

FMN_dh

Protein Analysis

390

Amino Acids

44.65

Weight (kDa)

9.79

Isoelectric Point (pI)

53.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Branch	PF02485	75 - 330	2.2e-67	Core-2/I-Branching enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002723)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18360 AT4G18360 AT4G18360 AT4G18360
fragaria_vesca	FvH4_3g05330 FvH4_3g05330 FvH4_3g05330 FvH4_3g05330
malus_domestica	MD05G1281900.v1.1 MD10G1260600.v1.1
prunus_persica	Prupe.4G082600_v2.0.a1 Prupe.4G082600_v2.0.a1 Prupe.4G082600_v2.0.a1 Prupe.4G082600_v2.0.a1 Prupe.4G082600_v2.0.a1
pyrus_communis	pycom05g26180 pycom10g21660
rosa_chinensis	RchiOBHm_Chr5g0014411 RchiOBHm_Chr6g0278091 RchiOBHm_Chr6g0278121 RchiOBHm_Chr6g0278131
rosa_laevigata	RLG00000013240 RLG00000032106
rosa_multiflora	Rmu_sc0000791.1_g000023 Rmu_sc0000791.1_g000034 Rmu_sc0000791.1_g000050 Rmu_ssc0000422.1_g000039
rosa_roxburghii	Rroxscaffold_1G00062170 Rroxscaffold_7G00190510 Rroxscaffold_7G00190520
rosa_rugosa	Rorug05G0017900 Rorug06G0114800
rosa_samantha	Rh5AG112700 Rh6BG228600 Rh6CG231000
rosa_wichuraiana	Rw5G009780 Rw6G019610 Rw6G019640 Rw6G019650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	26
AccB1I	GGYRCC	1 cut(s)	1038
AccBSI	CCGCTC	1 cut(s)	259
AccI	GTMKAC	1 cut(s)	1008
AccII	CGCG	6 cut(s)	46, 171, 173, 242, 244, 332
AciI	CCGC	8 cut(s)	32, 216, 257, 330, 440, 604, 649, 965
AclWI	GGATC	3 cut(s)	467, 480, 664
AcoI	YGGCCR	1 cut(s)	382
AcsI	RAATTY	4 cut(s)	183, 307, 1022, 1048
AcuI	CTGAAG	2 cut(s)	514, 776
AcvI	CACGTG	1 cut(s)	52
AcyI	GRCGYC	2 cut(s)	23, 745
AdeI	CACNNNGTG	1 cut(s)	829
AfaI	GTAC	1 cut(s)	524
AfiI	CCNNNNNNNGG	2 cut(s)	363, 648
AgsI	TTSAA	5 cut(s)	307, 437, 730, 952, 1053
AjiI	CACGTC	1 cut(s)	248
AjnI	CCWGG	2 cut(s)	334, 585
AjuI	GAANNNNNNNTTGG	2 cut(s)	212, 244
AluBI	AGCT	9 cut(s)	66, 73, 204, 279, 464, 534, 582, 778, 856
AluI	AGCT	9 cut(s)	66, 73, 204, 279, 464, 534, 582, 778, 856
Alw26I	GTCTC	4 cut(s)	132, 372, 676, 1010
AlwI	GGATC	3 cut(s)	467, 480, 664
AlwNI	CAGNNNCTG	1 cut(s)	838
AoxI	GGCC	4 cut(s)	211, 382, 601, 966
ApeKI	GCWGC	3 cut(s)	133, 838, 1100
ApoI	RAATTY	4 cut(s)	183, 307, 1022, 1048
ArsI	GACNNNNNNTTYG	2 cut(s)	8, 40
AscI	GGCGCGCC	1 cut(s)	44
AspA2I	CCTAGG	1 cut(s)	563
AspLEI	GCGC	7 cut(s)	46, 48, 173, 244, 302, 334, 1110
AspS9I	GGNCC	4 cut(s)	60, 212, 601, 967
AsuHPI	GGTGA	3 cut(s)	16, 615, 1158
AvaII	GGWCC	1 cut(s)	60
AvrII	CCTAGG	1 cut(s)	563
BaeI	ACNNNNGTAYC	2 cut(s)	793, 826
BamHI	GGATCC	1 cut(s)	472
BanI	GGYRCC	1 cut(s)	1038
BauI	CACGAG	1 cut(s)	361
BbrPI	CACGTG	1 cut(s)	52
BbsI	GAAGAC	2 cut(s)	26, 76
BbvI	GCAGC	3 cut(s)	145, 825, 1087
BccI	CCATC	3 cut(s)	408, 547, 1171
BceAI	ACGGC	5 cut(s)	57, 369, 397, 877, 1026
BciT130I	CCWGG	2 cut(s)	336, 587
BciVI	GTATCC	1 cut(s)	821
BclI	TGATCA	1 cut(s)	54
BcoDI	GTCTC	4 cut(s)	132, 372, 676, 1010
BfaI	CTAG	1 cut(s)	564
BfmI	CTRYAG	2 cut(s)	115, 1056
BfoI	RGCGCY	1 cut(s)	303
BfuI	GTATCC	1 cut(s)	821
BglI	GCCNNNNNGGC	1 cut(s)	965
BglII	AGATCT	1 cut(s)	176
BisI	GCNGC	5 cut(s)	134, 604, 839, 966, 1101
BlnI	CCTAGG	1 cut(s)	563
BlsI	GCNGC	5 cut(s)	135, 605, 840, 967, 1102
Bme1390I	CCNGG	2 cut(s)	336, 587
Bme18I	GGWCC	1 cut(s)	60
BmgBI	CACGTC	1 cut(s)	248
BmgT120I	GGNCC	4 cut(s)	60, 212, 601, 967
BmiI	GGNNCC	4 cut(s)	214, 474, 969, 1040
BmrFI	CCNGG	2 cut(s)	336, 587
BmsI	GCATC	1 cut(s)	946
BpiI	GAAGAC	2 cut(s)	26, 76
BplI	GAGNNNNNCTC	2 cut(s)	892, 924
BpuEI	CTTGAG	2 cut(s)	488, 890
BsaAI	YACGTR	1 cut(s)	52
BsaHI	GRCGYC	2 cut(s)	23, 745
BsaI	GGTCTC	1 cut(s)	372
BsaJI	CCNNGG	2 cut(s)	563, 1092
BsaWI	WCCGGW	1 cut(s)	721
BsaXI	ACNNNNNCTCC	6 cut(s)	237, 267, 434, 464, 480, 510
Bsc4I	CCNNNNNNNGG	2 cut(s)	363, 648
Bse118I	RCCGGY	2 cut(s)	209, 293
Bse3DI	GCAATG	1 cut(s)	1110
BseBI	CCWGG	2 cut(s)	336, 587
BseDI	CCNNGG	2 cut(s)	563, 1092
BseGI	GGATG	4 cut(s)	419, 595, 709, 937
BseLI	CCNNNNNNNGG	2 cut(s)	363, 648
BseMI	GCAATG	1 cut(s)	1110
BseMII	CTCAG	2 cut(s)	143, 1106
BsePI	GCGCGC	1 cut(s)	44
BseRI	GAGGAG	1 cut(s)	488
BseX3I	CGGCCG	1 cut(s)	382
BseXI	GCAGC	3 cut(s)	145, 825, 1087
BsgI	GTGCAG	1 cut(s)	851
Bsh1236I	CGCG	6 cut(s)	46, 171, 173, 242, 244, 332
Bsh1285I	CGRYCG	1 cut(s)	385
BshFI	GGCC	4 cut(s)	213, 384, 603, 968
BshNI	GGYRCC	1 cut(s)	1038
BsiEI	CGRYCG	1 cut(s)	385
BsiSI	CCGG	3 cut(s)	210, 294, 722
BslI	CCNNNNNNNGG	2 cut(s)	363, 648
BsmAI	GTCTC	4 cut(s)	132, 372, 676, 1010
BsmI	GAATGC	1 cut(s)	295
BsnI	GGCC	4 cut(s)	213, 384, 603, 968
Bso31I	GGTCTC	1 cut(s)	372
Bsp1407I	TGTACA	1 cut(s)	522
Bsp143I	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
BspACI	CCGC	8 cut(s)	32, 216, 257, 330, 440, 604, 649, 965
BspANI	GGCC	4 cut(s)	213, 384, 603, 968
BspCNI	CTCAG	2 cut(s)	142, 1107
BspFNI	CGCG	6 cut(s)	46, 171, 173, 242, 244, 332
BspLI	GGNNCC	4 cut(s)	214, 474, 969, 1040
BspMAI	CTGCAG	1 cut(s)	1060
BspPI	GGATC	3 cut(s)	467, 480, 664
BspT107I	GGYRCC	1 cut(s)	1038
BspTNI	GGTCTC	1 cut(s)	372
BsrBI	CCGCTC	1 cut(s)	259
BsrDI	GCAATG	1 cut(s)	1110
BsrFI	RCCGGY	2 cut(s)	209, 293
BsrGI	TGTACA	1 cut(s)	522
BssAI	RCCGGY	2 cut(s)	209, 293
BssECI	CCNNGG	2 cut(s)	563, 1092
BssHII	GCGCGC	1 cut(s)	44
BssMI	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
BssNAI	GTATAC	1 cut(s)	1009
BssNI	GRCGYC	2 cut(s)	23, 745
BssSI	CACGAG	1 cut(s)	361
BssT1I	CCWWGG	2 cut(s)	563, 1092
Bst1107I	GTATAC	1 cut(s)	1009
Bst2BI	CACGAG	1 cut(s)	361
Bst2UI	CCWGG	2 cut(s)	336, 587
Bst4CI	ACNGT	3 cut(s)	509, 663, 809
BstACI	GRCGYC	2 cut(s)	23, 745
BstAPI	GCANNNNNTGC	1 cut(s)	838
BstAUI	TGTACA	1 cut(s)	522
BstBAI	YACGTR	1 cut(s)	52
BstC8I	GCNNGC	5 cut(s)	46, 211, 743, 843, 935
BstDEI	CTNAG	2 cut(s)	129, 1115
BstF5I	GGATG	4 cut(s)	419, 595, 709, 937
BstFNI	CGCG	6 cut(s)	46, 171, 173, 242, 244, 332
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	7 cut(s)	46, 48, 173, 244, 302, 334, 1110
BstKTI	GATC	7 cut(s)	57, 81, 179, 225, 475, 659, 999
BstMAI	GTCTC	4 cut(s)	132, 372, 676, 1010
BstMBI	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
BstMCI	CGRYCG	1 cut(s)	385
BstMWI	GCNNNNNNNGC	8 cut(s)	210, 215, 224, 299, 747, 838, 965, 1116
BstNI	CCWGG	2 cut(s)	336, 587
BstSCI	CCNGG	2 cut(s)	334, 585
BstSFI	CTRYAG	2 cut(s)	115, 1056
BstUI	CGCG	6 cut(s)	46, 171, 173, 242, 244, 332
BstV1I	GCAGC	3 cut(s)	145, 825, 1087
BstV2I	GAAGAC	2 cut(s)	26, 76
BstX2I	RGATCY	2 cut(s)	176, 472
BstYI	RGATCY	2 cut(s)	176, 472
BstZ17I	GTATAC	1 cut(s)	1009
BstZI	CGGCCG	1 cut(s)	382
BsuI	GTATCC	1 cut(s)	821
BsuRI	GGCC	4 cut(s)	213, 384, 603, 968
BtgZI	GCGATG	1 cut(s)	860
BtrI	CACGTC	1 cut(s)	248
BtsCI	GGATG	4 cut(s)	419, 595, 709, 937
BtsIMutI	CAGTG	1 cut(s)	668
Cac8I	GCNNGC	5 cut(s)	46, 211, 743, 843, 935
CaiI	CAGNNNCTG	1 cut(s)	838
CfoI	GCGC	7 cut(s)	46, 48, 173, 244, 302, 334, 1110
Cfr10I	RCCGGY	2 cut(s)	209, 293
Cfr13I	GGNCC	4 cut(s)	60, 212, 601, 967
CseI	GACGC	3 cut(s)	187, 734, 844
Csp6I	GTAC	1 cut(s)	523
CviAII	CATG	4 cut(s)	430, 956, 1004, 1170
CviQI	GTAC	1 cut(s)	523
DdeI	CTNAG	2 cut(s)	129, 1115
DpnI	GATC	7 cut(s)	56, 80, 178, 224, 474, 658, 998
DpnII	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
DraIII	CACNNNGTG	1 cut(s)	829
EaeI	YGGCCR	1 cut(s)	382
EagI	CGGCCG	1 cut(s)	382
EciI	GGCGGA	1 cut(s)	664
EclXI	CGGCCG	1 cut(s)	382
Eco130I	CCWWGG	2 cut(s)	563, 1092
Eco31I	GGTCTC	1 cut(s)	372
Eco32I	GATATC	1 cut(s)	763
Eco47I	GGWCC	1 cut(s)	60
Eco52I	CGGCCG	1 cut(s)	382
Eco57I	CTGAAG	2 cut(s)	514, 776
Eco72I	CACGTG	1 cut(s)	52
EcoRI	GAATTC	1 cut(s)	1022
EcoRII	CCWGG	2 cut(s)	334, 585
EcoRV	GATATC	1 cut(s)	763
EcoT14I	CCWWGG	2 cut(s)	563, 1092
ErhI	CCWWGG	2 cut(s)	563, 1092
FaeI	CATG	4 cut(s)	433, 959, 1007, 1173
FalI	AAGNNNNNCTT	4 cut(s)	212, 244, 702, 734
FatI	CATG	4 cut(s)	429, 955, 1003, 1169
FauI	CCCGC	2 cut(s)	223, 264
FbaI	TGATCA	1 cut(s)	54
FblI	GTMKAC	1 cut(s)	1008
Fnu4HI	GCNGC	5 cut(s)	134, 604, 839, 966, 1101
FokI	GGATG	4 cut(s)	426, 602, 716, 924
Fsp4HI	GCNGC	5 cut(s)	134, 604, 839, 966, 1101
FspBI	CTAG	1 cut(s)	564
GlaI	GCGC	7 cut(s)	45, 47, 172, 243, 301, 333, 1109
GluI	GCNGC	5 cut(s)	134, 604, 839, 966, 1101
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	4 cut(s)	213, 384, 603, 968
HapII	CCGG	3 cut(s)	210, 294, 722
HgaI	GACGC	3 cut(s)	187, 734, 844
HhaI	GCGC	7 cut(s)	46, 48, 173, 244, 302, 334, 1110
Hin1I	GRCGYC	2 cut(s)	23, 745
Hin1II	CATG	4 cut(s)	433, 959, 1007, 1173
Hin6I	GCGC	7 cut(s)	44, 46, 171, 242, 300, 332, 1108
HinP1I	GCGC	7 cut(s)	44, 46, 171, 242, 300, 332, 1108
HindIII	AAGCTT	1 cut(s)	71
HinfI	GANTC	4 cut(s)	353, 422, 676, 781
HpaII	CCGG	3 cut(s)	210, 294, 722
HphI	GGTGA	3 cut(s)	16, 615, 1158
Hpy166II	GTNNAC	3 cut(s)	357, 577, 1009
Hpy188I	TCNGA	7 cut(s)	78, 505, 681, 767, 795, 1028, 1116
Hpy188III	TCNNGA	3 cut(s)	180, 286, 467
Hpy8I	GTNNAC	3 cut(s)	357, 577, 1009
Hpy99I	CGWCG	3 cut(s)	28, 249, 750
HpyAV	CCTTC	5 cut(s)	162, 238, 589, 870, 1121
HpyCH4III	ACNGT	3 cut(s)	509, 663, 809
HpyCH4IV	ACGT	3 cut(s)	23, 51, 247
HpyCH4V	TGCA	4 cut(s)	741, 832, 1058, 1103
HpyF10VI	GCNNNNNNNGC	8 cut(s)	210, 215, 224, 299, 747, 838, 965, 1116
HpyF3I	CTNAG	2 cut(s)	129, 1115
HpySE526I	ACGT	3 cut(s)	23, 51, 247
Hsp92I	GRCGYC	2 cut(s)	23, 745
Hsp92II	CATG	4 cut(s)	433, 959, 1007, 1173
HspAI	GCGC	7 cut(s)	44, 46, 171, 242, 300, 332, 1108
KroI	GCCGGC	1 cut(s)	209
KroNI	GCCGGC	1 cut(s)	211
Ksp22I	TGATCA	1 cut(s)	54
Kzo9I	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
LmnI	GCTCC	1 cut(s)	900
Lsp1109I	GCAGC	3 cut(s)	145, 825, 1087
LweI	GCATC	1 cut(s)	946
MaeI	CTAG	1 cut(s)	564
MaeII	ACGT	3 cut(s)	23, 51, 247
MaeIII	GTNAC	4 cut(s)	4, 248, 621, 1133
MalI	GATC	7 cut(s)	56, 80, 178, 224, 474, 658, 998
MbiI	CCGCTC	1 cut(s)	259
MboI	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
MboII	GAAGA	6 cut(s)	28, 31, 76, 147, 150, 274
MfeI	CAATTG	1 cut(s)	389
MflI	RGATCY	2 cut(s)	176, 472
MluCI	AATT	6 cut(s)	183, 307, 389, 544, 1022, 1048
MlyI	GAGTC	1 cut(s)	362
MmeI	TCCRAC	1 cut(s)	528
MnlI	CCTC	8 cut(s)	263, 357, 438, 463, 509, 592, 981, 1114
MroNI	GCCGGC	1 cut(s)	209
MseI	TTAA	4 cut(s)	786, 884, 1140, 1157
MslI	CAYNNNNRTG	3 cut(s)	407, 960, 1168
MspA1I	CMGCKG	1 cut(s)	66
MspI	CCGG	3 cut(s)	210, 294, 722
MspR9I	CCNGG	2 cut(s)	336, 587
MunI	CAATTG	1 cut(s)	389
Mva1269I	GAATGC	1 cut(s)	295
MvaI	CCWGG	2 cut(s)	336, 587
MvnI	CGCG	6 cut(s)	46, 171, 173, 242, 244, 332
MwoI	GCNNNNNNNGC	8 cut(s)	210, 215, 224, 299, 747, 838, 965, 1116
NaeI	GCCGGC	1 cut(s)	211
NdeII	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
NgoMIV	GCCGGC	1 cut(s)	209
NlaIII	CATG	4 cut(s)	433, 959, 1007, 1173
NlaIV	GGNNCC	4 cut(s)	214, 474, 969, 1040
NmuCI	GTSAC	4 cut(s)	4, 248, 621, 1133
PalAI	GGCGCGCC	1 cut(s)	44
PauI	GCGCGC	1 cut(s)	44
PcsI	WCGNNNNNNNCGW	3 cut(s)	20, 87, 842
PctI	GAATGC	1 cut(s)	295
PdiI	GCCGGC	1 cut(s)	211
PfeI	GAWTC	3 cut(s)	422, 676, 781
PfoI	TCCNGGA	1 cut(s)	585
PkrI	GCNGC	5 cut(s)	135, 605, 840, 967, 1102
PleI	GAGTC	1 cut(s)	361
PmaCI	CACGTG	1 cut(s)	52
PmlI	CACGTG	1 cut(s)	52
PpsI	GAGTC	1 cut(s)	361
Ppu21I	YACGTR	1 cut(s)	52
Psp6I	CCWGG	2 cut(s)	334, 585
PspCI	CACGTG	1 cut(s)	52
PspGI	CCWGG	2 cut(s)	334, 585
PspN4I	GGNNCC	4 cut(s)	214, 474, 969, 1040
PspPI	GGNCC	4 cut(s)	60, 212, 601, 967
PstI	CTGCAG	1 cut(s)	1060
PstNI	CAGNNNCTG	1 cut(s)	838
PsuI	RGATCY	2 cut(s)	176, 472
PteI	GCGCGC	1 cut(s)	44
PvuII	CAGCTG	1 cut(s)	66
RsaI	GTAC	1 cut(s)	524
RsaNI	GTAC	1 cut(s)	523
RseI	CAYNNNNRTG	3 cut(s)	407, 960, 1168
SaqAI	TTAA	4 cut(s)	786, 884, 1140, 1157
SatI	GCNGC	5 cut(s)	134, 604, 839, 966, 1101
Sau3AI	GATC	7 cut(s)	54, 78, 176, 222, 472, 656, 996
Sau96I	GGNCC	4 cut(s)	60, 212, 601, 967
SchI	GAGTC	1 cut(s)	362
ScrFI	CCNGG	2 cut(s)	336, 587
SfaNI	GCATC	1 cut(s)	946
SfcI	CTRYAG	2 cut(s)	115, 1056
SgsI	GGCGCGCC	1 cut(s)	44
SinI	GGWCC	1 cut(s)	60
SmiMI	CAYNNNNRTG	3 cut(s)	407, 960, 1168
SmlI	CTYRAG	2 cut(s)	467, 869
SmoI	CTYRAG	2 cut(s)	467, 869
Sse9I	AATT	6 cut(s)	183, 307, 389, 544, 1022, 1048
SsiI	CCGC	8 cut(s)	32, 216, 257, 330, 440, 604, 649, 965
SspMI	CTAG	1 cut(s)	564
StyD4I	CCNGG	2 cut(s)	334, 585
StyI	CCWWGG	2 cut(s)	563, 1092
TaaI	ACNGT	3 cut(s)	509, 663, 809
TaiI	ACGT	3 cut(s)	26, 54, 250
TaqI	TCGA	5 cut(s)	181, 261, 285, 314, 348
TasI	AATT	6 cut(s)	183, 307, 389, 544, 1022, 1048
TatI	WGTACW	1 cut(s)	522
TauI	GCSGC	2 cut(s)	606, 968
TfiI	GAWTC	3 cut(s)	422, 676, 781
Tru1I	TTAA	4 cut(s)	786, 884, 1140, 1157
Tru9I	TTAA	4 cut(s)	786, 884, 1140, 1157
TscAI	CASTG	1 cut(s)	668
TseFI	GTSAC	4 cut(s)	4, 248, 621, 1133
TseI	GCWGC	3 cut(s)	133, 838, 1100
Tsp45I	GTSAC	4 cut(s)	4, 248, 621, 1133
TspDTI	ATGAA	3 cut(s)	150, 526, 723
TspGWI	ACGGA	1 cut(s)	79
TspRI	CASTG	1 cut(s)	668
VpaK11BI	GGWCC	1 cut(s)	60
XapI	RAATTY	4 cut(s)	183, 307, 1022, 1048
XmaJI	CCTAGG	1 cut(s)	563
XmiI	GTMKAC	1 cut(s)	1008
XspI	CTAG	1 cut(s)	564
ZraI	GACGTC	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.