Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005800

Physical Location & Seq

Genomic Coordinates Forward (+)

1729344 .. 1734322

Gene Structure 4979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0026800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGTTCCAGTTTATTTGTTTGAGTTTGAATGAGTTTATTATTAATTTATTTTATTTAAGGTTACTTGGTGCGCTAAGCACATATATCAGCACACCATATATATGTAGTATAAAAGCAGGTAATGGGATTCTGACAGTGGAAGTACTAAGAGAATTAAAGAAGGTCGAGAGAACTTGGGTAGATAGCATGGACTACTCCAGTGATAGTAATGAGCTCTCTGAACCCATCTTGACTGACAAAAGATCTTCATCTGTTCAACTAGTGAGCTCGGAACTGGAAGAAACGCTCTCCAACACCGAGCTTCCGTACTTCCACCGTCTTAGACGTGCCACGTGGGTCGAACTGAAGATTCTCTTCCGCCTTGCAGCTCCGGCAGTGGTGGTTTACTTGCTAAACAACGTTATTTCCATGTCCAGCCAAATCTACTGCGGGCATCTCGGCAATCTCGAACTCGCTGCCTCTTCTCTTGGCAACACCGGCATCCAAGTTTTTGCCTACGGCCTCATGCTTGGAATGGGAAGTGCGGTGGAAACGCTCTGTGGTCAAGCCTATGGAGCAAAGAAATATGACATGCTAGGCGTATATCTGCAGCGTTCAACGATCCTGCTAATGGCAACTGGGATCCCAGTTATGTTCATCTACATCTTCTCCAAGCCCATCTTGATTGCCCTAGGCGAATCGGCCACCATTGCCTCTGCAGCCGCAATCTTTGTTTACGGGCTTATCCCCCAAATCTTTGCCTACGCTTGCAATTTCCCCATACAAAAATTCCTCCAGGCTCAGAGCATCGTGTTCCCGAGCGCGTACATATCCGCGGCTGCCCTCGTGGTGCATGTGGTGCTGAGTTGGGTAGTGATTTATAAGTTGGGATGGGGCTTGTTAGGCGCATCGCTGATGTTGAGCTTTTCGTGGTGGATTATAGTGGTGGCGCAGTTTGTTTACATATTGCTGAGTCCAAGGTGTAAACGTACTTGGACAGGTTTTAGCATGCAGGCTTTTTCTGGGCTTTGGACTTTTCTGAAGCTATCTGTTGCGTCTGCCGTAATGCTTTGCCTCGAGACTTGGTACTATCAGATTATCGTTTTGATTGCTGGGTTGCTTGAAGACGCTGAAATTGCCTTGGACGCTCTCTCTGTTTGCATGACCATATCTGGATGGGTGTTCATGGTTGCTGTGGGTTTCAATGCTGCTGCAAGTGTGAGGATTGGGAATGAGCTTGGGGCGGGACATCCAAAGTCGGCCGCATTTGCAGTAATAATAGTGACATCAACCTCGTTCATCATCTCAGTAGTGTGTGCCATAGTTGTGCTTGCACTACGAAATGTCATAAGCTACGCGTTCACCGAGGGCGAGACTGTGTCCAATGCAGTCTCAGCCCTATCTCCTTACCTTGCTGTCTCTATTATGCTCAACGGCATCCAACCTGTTTTGTCTGGAGTGGCTGTTGGGTGTGGATGGCAAGCATTTGTGGCATATGTTAACGTCGGATGTTACTACATTATTGGTGTTCCCTTGGGTTGTGTTCTTGGCTTCAAGTTCGGCTTTGGAGCCCAGGGAATATGGTCTGGAATGATAGGAGGGACATTTATACAGACAGTGATCTTATTGTGGGTCACACTTCGGACTGATTGGAATAAAGAGGTCGTAAATGCAAAGAATCGTTTGGACATGTGGGACGACAAGAAAGAGCCTCTTCTCACAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

PSI_PSAK

Protein Analysis

568

Amino Acids

62.1

Weight (kDa)

6.46

Isoelectric Point (pI)

28.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	124 - 284	3.8e-35	MatE
MatE	PF01554	346 - 506	1.2e-29	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005800)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05430 AT4G05430 AT4G05430
fragaria_vesca	FvH4_3g09670
malus_domestica	MD00G1109800.v1.1 MD05G1276200.v1.1
prunus_persica	Prupe.4G088100_v2.0.a1 Prupe.4G088100_v2.0.a1 Prupe.4G088100_v2.0.a1 Prupe.4G088100_v2.0.a1
pyrus_communis	pycom05g25720
rosa_chinensis	RchiOBHm_Chr1g0364551 RchiOBHm_Chr5g0015351
rosa_laevigata	RLG00000032194
rosa_multiflora	Rmu_sc0012407.1_g000001 Rmu_sc0012407.1_g000002 Rmu_sc0013747.1_g000001 Rmu_sc0014430.1_g000002 Rmu_sc0017755.1_g000006
rosa_roxburghii	Rroxscaffold_1G00061100
rosa_rugosa	Rorug05G0026800
rosa_samantha	Rh1AG325100 Rh5AG120300 Rh5BG119200 Rh5CG129700 Rh5DG118300
rosa_wichuraiana	Rw1G028820 Rw5G010400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	861
Acc36I	ACCTGC	1 cut(s)	107
AccII	CGCG	3 cut(s)	803, 815, 1337
AciI	CCGC	8 cut(s)	358, 429, 524, 702, 813, 815, 1223, 1242
AclI	AACGTT	1 cut(s)	399
AclWI	GGATC	3 cut(s)	595, 616, 629
AcoI	YGGCCR	2 cut(s)	681, 1239
AcsI	RAATTY	1 cut(s)	767
AcuI	CTGAAG	2 cut(s)	365, 1040
AcvI	CACGTG	1 cut(s)	333
AfaI	GTAC	5 cut(s)	144, 308, 806, 970, 1067
AfiI	CCNNNNNNNGG	1 cut(s)	610
AflIII	ACRYGT	2 cut(s)	1335, 1668
AgsI	TTSAA	6 cut(s)	28, 257, 597, 1103, 1183, 1534
AhlI	ACTAGT	1 cut(s)	259
AjiI	CACGTC	1 cut(s)	326
AjnI	CCWGG	2 cut(s)	774, 1551
AluBI	AGCT	8 cut(s)	214, 267, 301, 368, 903, 1024, 1216, 1332
AluI	AGCT	8 cut(s)	214, 267, 301, 368, 903, 1024, 1216, 1332
Alw21I	GWGCWC	2 cut(s)	216, 269
Alw26I	GTCTC	4 cut(s)	1052, 1346, 1375, 1402
AlwI	GGATC	3 cut(s)	595, 616, 629
Ama87I	CYCGRG	2 cut(s)	796, 1055
AoxI	GGCC	3 cut(s)	499, 681, 1239
ApeKI	GCWGC	7 cut(s)	365, 455, 589, 698, 818, 1187, 1190
ApoI	RAATTY	1 cut(s)	767
AseI	ATTAAT	1 cut(s)	42
AspA2I	CCTAGG	1 cut(s)	670
AspLEI	GCGC	4 cut(s)	73, 803, 887, 931
AsuHPI	GGTGA	1 cut(s)	1333
AvaI	CYCGRG	2 cut(s)	796, 1055
AvrII	CCTAGG	1 cut(s)	670
BamHI	GGATCC	1 cut(s)	621
BanII	GRGCYC	3 cut(s)	216, 269, 1552
BauI	CACGAG	1 cut(s)	824
BbrPI	CACGTG	1 cut(s)	333
BbsI	GAAGAC	1 cut(s)	1110
Bbv12I	GWGCWC	2 cut(s)	216, 269
BbvI	GCAGC	7 cut(s)	377, 442, 601, 710, 805, 1174, 1177
BccI	CCATC	5 cut(s)	233, 665, 864, 1149, 1449
BceAI	ACGGC	3 cut(s)	514, 1025, 1429
BcgI	CGANNNNNNTGC	2 cut(s)	437, 471
BciT130I	CCWGG	2 cut(s)	776, 1553
BcoDI	GTCTC	4 cut(s)	1052, 1346, 1375, 1402
BcuI	ACTAGT	1 cut(s)	259
BfaI	CTAG	3 cut(s)	260, 575, 671
BfmI	CTRYAG	2 cut(s)	587, 696
BfuAI	ACCTGC	1 cut(s)	107
BglII	AGATCT	1 cut(s)	242
BlnI	CCTAGG	1 cut(s)	670
BlpI	GCTNAGC	1 cut(s)	74
BmcAI	AGTACT	1 cut(s)	144
Bme1390I	CCNGG	2 cut(s)	776, 1553
BmeT110I	CYCGRG	2 cut(s)	796, 1055
BmgBI	CACGTC	1 cut(s)	326
BmiI	GGNNCC	2 cut(s)	623, 1549
BmrFI	CCNGG	2 cut(s)	776, 1553
BmrI	ACTGGG	2 cut(s)	620, 627
BmsI	GCATC	5 cut(s)	442, 489, 795, 896, 1425
BmuI	ACTGGG	2 cut(s)	620, 627
BpiI	GAAGAC	1 cut(s)	1110
BpmI	CTGGAG	3 cut(s)	181, 758, 1455
Bpu1102I	GCTNAGC	1 cut(s)	74
BsaAI	YACGTR	1 cut(s)	333
BsaBI	GATNNNNATC	1 cut(s)	247
BsaJI	CCNNGG	8 cut(s)	670, 813, 956, 1119, 1344, 1512, 1551, 1552
BsaXI	ACNNNNNCTCC	4 cut(s)	632, 662, 1428, 1458
Bsc4I	CCNNNNNNNGG	1 cut(s)	610
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	5 cut(s)	7, 198, 279, 622, 626
Bse3DI	GCAATG	1 cut(s)	687
Bse8I	GATNNNNATC	1 cut(s)	247
BseBI	CCWGG	2 cut(s)	776, 1553
BseDI	CCNNGG	8 cut(s)	670, 813, 956, 1119, 1344, 1512, 1551, 1552
BseGI	GGATG	7 cut(s)	480, 875, 1160, 1228, 1416, 1460, 1493
BseJI	GATNNNNATC	1 cut(s)	247
BseLI	CCNNNNNNNGG	1 cut(s)	610
BseMI	GCAATG	1 cut(s)	687
BseMII	CTCAG	5 cut(s)	794, 833, 941, 1299, 1386
BseNI	ACTGG	5 cut(s)	7, 198, 279, 622, 626
BseX3I	CGGCCG	1 cut(s)	1239
BseXI	GCAGC	7 cut(s)	377, 442, 601, 710, 805, 1174, 1177
BseYI	CCCAGC	1 cut(s)	1091
Bsh1236I	CGCG	3 cut(s)	803, 815, 1337
Bsh1285I	CGRYCG	1 cut(s)	1242
BshFI	GGCC	3 cut(s)	501, 683, 1241
BsiEI	CGRYCG	1 cut(s)	1242
BsiHKAI	GWGCWC	2 cut(s)	216, 269
BsiHKCI	CYCGRG	2 cut(s)	796, 1055
BsiSI	CCGG	2 cut(s)	371, 477
BslFI	GGGAC	3 cut(s)	1239, 1594, 1688
BslI	CCNNNNNNNGG	1 cut(s)	610
BsmAI	GTCTC	4 cut(s)	1052, 1346, 1375, 1402
BsmFI	GGGAC	3 cut(s)	1239, 1594, 1688
BsnI	GGCC	3 cut(s)	501, 683, 1241
BsoBI	CYCGRG	2 cut(s)	796, 1055
Bsp1286I	GDGCHC	3 cut(s)	216, 269, 1552
Bsp143I	GATC	4 cut(s)	242, 600, 621, 1599
Bsp1720I	GCTNAGC	1 cut(s)	74
BspACI	CCGC	8 cut(s)	358, 429, 524, 702, 813, 815, 1223, 1242
BspANI	GGCC	3 cut(s)	501, 683, 1241
BspCNI	CTCAG	5 cut(s)	793, 834, 942, 1298, 1385
BspFNI	CGCG	3 cut(s)	803, 815, 1337
BspLI	GGNNCC	2 cut(s)	623, 1549
BspMAI	CTGCAG	2 cut(s)	591, 700
BspMI	ACCTGC	1 cut(s)	107
BspPI	GGATC	3 cut(s)	595, 616, 629
BsrDI	GCAATG	1 cut(s)	687
BsrFI	RCCGGY	1 cut(s)	476
BsrI	ACTGG	5 cut(s)	7, 198, 279, 622, 626
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	8 cut(s)	670, 813, 956, 1119, 1344, 1512, 1551, 1552
BssMI	GATC	4 cut(s)	242, 600, 621, 1599
BssSI	CACGAG	1 cut(s)	824
BssT1I	CCWWGG	4 cut(s)	670, 956, 1119, 1512
Bst2BI	CACGAG	1 cut(s)	824
Bst2UI	CCWGG	2 cut(s)	776, 1553
Bst4CI	ACNGT	4 cut(s)	136, 317, 1357, 1597
Bst6I	CTCTTC	3 cut(s)	359, 466, 1698
BstAPI	GCANNNNNTGC	1 cut(s)	838
BstBAI	YACGTR	1 cut(s)	333
BstC8I	GCNNGC	6 cut(s)	431, 748, 989, 993, 1311, 1461
BstDEI	CTNAG	8 cut(s)	74, 146, 320, 780, 842, 950, 1285, 1372
BstDSI	CCRYGG	1 cut(s)	813
BstF5I	GGATG	7 cut(s)	480, 875, 1160, 1228, 1416, 1460, 1493
BstFNI	CGCG	3 cut(s)	803, 815, 1337
BstHHI	GCGC	4 cut(s)	73, 803, 887, 931
BstKTI	GATC	4 cut(s)	245, 603, 624, 1602
BstMAI	GTCTC	4 cut(s)	1052, 1346, 1375, 1402
BstMBI	GATC	4 cut(s)	242, 600, 621, 1599
BstMCI	CGRYCG	1 cut(s)	1242
BstNI	CCWGG	2 cut(s)	776, 1553
BstNSI	RCATGY	4 cut(s)	574, 836, 991, 1672
BstSCI	CCNGG	2 cut(s)	774, 1551
BstSFI	CTRYAG	2 cut(s)	587, 696
BstUI	CGCG	3 cut(s)	803, 815, 1337
BstV1I	GCAGC	7 cut(s)	377, 442, 601, 710, 805, 1174, 1177
BstV2I	GAAGAC	1 cut(s)	1110
BstX2I	RGATCY	2 cut(s)	242, 621
BstYI	RGATCY	2 cut(s)	242, 621
BstZI	CGGCCG	1 cut(s)	1239
BsuRI	GGCC	3 cut(s)	501, 683, 1241
BtgI	CCRYGG	1 cut(s)	813
BtgZI	GCGATG	1 cut(s)	873
BtrI	CACGTC	1 cut(s)	326
BtsCI	GGATG	7 cut(s)	480, 875, 1160, 1228, 1416, 1460, 1493
BtsI	GCAGTG	1 cut(s)	381
BtsIMutI	CAGTG	4 cut(s)	141, 205, 381, 1602
BveI	ACCTGC	1 cut(s)	107
Cac8I	GCNNGC	6 cut(s)	431, 748, 989, 993, 1311, 1461
CfoI	GCGC	4 cut(s)	73, 803, 887, 931
Cfr10I	RCCGGY	1 cut(s)	476
Cfr42I	CCGCGG	1 cut(s)	816
CseI	GACGC	3 cut(s)	1023, 1115, 1133
Csp6I	GTAC	5 cut(s)	143, 307, 805, 969, 1066
CviAII	CATG	9 cut(s)	187, 409, 505, 571, 833, 988, 1141, 1165, 1669
CviQI	GTAC	5 cut(s)	143, 307, 805, 969, 1066
DdeI	CTNAG	8 cut(s)	74, 146, 320, 780, 842, 950, 1285, 1372
DpnI	GATC	4 cut(s)	244, 602, 623, 1601
DpnII	GATC	4 cut(s)	242, 600, 621, 1599
EaeI	YGGCCR	2 cut(s)	681, 1239
EagI	CGGCCG	1 cut(s)	1239
Eam1104I	CTCTTC	3 cut(s)	359, 466, 1698
EarI	CTCTTC	3 cut(s)	359, 466, 1698
EciI	GGCGGA	1 cut(s)	347
Ecl136II	GAGCTC	2 cut(s)	214, 267
EclXI	CGGCCG	1 cut(s)	1239
Eco130I	CCWWGG	4 cut(s)	670, 956, 1119, 1512
Eco24I	GRGCYC	3 cut(s)	216, 269, 1552
Eco52I	CGGCCG	1 cut(s)	1239
Eco53kI	GAGCTC	2 cut(s)	214, 267
Eco57I	CTGAAG	2 cut(s)	365, 1040
Eco72I	CACGTG	1 cut(s)	333
Eco88I	CYCGRG	2 cut(s)	796, 1055
EcoICRI	GAGCTC	2 cut(s)	214, 267
EcoRII	CCWGG	2 cut(s)	774, 1551
EcoT14I	CCWWGG	4 cut(s)	670, 956, 1119, 1512
EcoT38I	GRGCYC	3 cut(s)	216, 269, 1552
ErhI	CCWWGG	4 cut(s)	670, 956, 1119, 1512
FaeI	CATG	9 cut(s)	190, 412, 508, 574, 836, 991, 1144, 1168, 1672
FalI	AAGNNNNNCTT	7 cut(s)	338, 370, 644, 676, 1526, 1558, 1677
FaqI	GGGAC	3 cut(s)	1239, 1594, 1688
FatI	CATG	9 cut(s)	186, 408, 504, 570, 832, 987, 1140, 1164, 1668
FauI	CCCGC	2 cut(s)	422, 1216
FauNDI	CATATG	1 cut(s)	1474
FokI	GGATG	7 cut(s)	467, 882, 1167, 1215, 1403, 1467, 1500
FriOI	GRGCYC	3 cut(s)	216, 269, 1552
FspBI	CTAG	3 cut(s)	260, 575, 671
GlaI	GCGC	4 cut(s)	72, 802, 886, 930
GsaI	CCCAGC	1 cut(s)	1095
GsuI	CTGGAG	3 cut(s)	181, 758, 1455
HaeIII	GGCC	3 cut(s)	501, 683, 1241
HapII	CCGG	2 cut(s)	371, 477
HgaI	GACGC	3 cut(s)	1023, 1115, 1133
HhaI	GCGC	4 cut(s)	73, 803, 887, 931
Hin1II	CATG	9 cut(s)	190, 412, 508, 574, 836, 991, 1144, 1168, 1672
Hin6I	GCGC	4 cut(s)	71, 801, 885, 929
HinP1I	GCGC	4 cut(s)	71, 801, 885, 929
HincII	GTYRAC	1 cut(s)	1480
HindII	GTYRAC	1 cut(s)	1480
HinfI	GANTC	5 cut(s)	127, 349, 677, 952, 1657
HpaI	GTTAAC	1 cut(s)	1480
HpaII	CCGG	2 cut(s)	371, 477
HphI	GGTGA	1 cut(s)	1333
Hpy166II	GTNNAC	6 cut(s)	385, 715, 940, 965, 1341, 1480
Hpy188I	TCNGA	8 cut(s)	132, 220, 271, 783, 1020, 1074, 1487, 1623
Hpy188III	TCNNGA	9 cut(s)	166, 229, 446, 661, 796, 1057, 1152, 1434, 1566
Hpy8I	GTNNAC	6 cut(s)	385, 715, 940, 965, 1341, 1480
Hpy99I	CGWCG	1 cut(s)	1487
HpyAV	CCTTC	1 cut(s)	154
HpyCH4III	ACNGT	4 cut(s)	136, 317, 1357, 1597
HpyCH4IV	ACGT	5 cut(s)	325, 332, 399, 967, 1482
HpyF3I	CTNAG	8 cut(s)	74, 146, 320, 780, 842, 950, 1285, 1372
HpySE526I	ACGT	5 cut(s)	325, 332, 399, 967, 1482
Hsp92II	CATG	9 cut(s)	190, 412, 508, 574, 836, 991, 1144, 1168, 1672
HspAI	GCGC	4 cut(s)	71, 801, 885, 929
KspAI	GTTAAC	1 cut(s)	1480
KspI	CCGCGG	1 cut(s)	816
Kzo9I	GATC	4 cut(s)	242, 600, 621, 1599
LmnI	GCTCC	3 cut(s)	373, 554, 1547
Lsp1109I	GCAGC	7 cut(s)	377, 442, 601, 710, 805, 1174, 1177
LweI	GCATC	5 cut(s)	442, 489, 795, 896, 1425
MaeI	CTAG	3 cut(s)	260, 575, 671
MaeII	ACGT	5 cut(s)	325, 332, 399, 967, 1482
MaeIII	GTNAC	4 cut(s)	60, 1261, 1490, 1612
MalI	GATC	4 cut(s)	244, 602, 623, 1601
MboI	GATC	4 cut(s)	242, 600, 621, 1599
MboII	GAAGA	8 cut(s)	237, 290, 346, 358, 453, 637, 1115, 1685
MflI	RGATCY	2 cut(s)	242, 621
MhlI	GDGCHC	3 cut(s)	216, 269, 1552
MluCI	AATT	5 cut(s)	43, 152, 751, 767, 1113
MluI	ACGCGT	1 cut(s)	1335
MlyI	GAGTC	1 cut(s)	961
MmeI	TCCRAC	3 cut(s)	315, 1444, 1465
MseI	TTAA	4 cut(s)	42, 56, 155, 1479
MslI	CAYNNNNRTG	2 cut(s)	100, 1304
MspA1I	CMGCKG	1 cut(s)	815
MspI	CCGG	2 cut(s)	371, 477
MspR9I	CCNGG	2 cut(s)	776, 1553
MvaI	CCWGG	2 cut(s)	776, 1553
MvnI	CGCG	3 cut(s)	803, 815, 1337
NdeI	CATATG	1 cut(s)	1474
NdeII	GATC	4 cut(s)	242, 600, 621, 1599
NlaIII	CATG	9 cut(s)	190, 412, 508, 574, 836, 991, 1144, 1168, 1672
NlaIV	GGNNCC	2 cut(s)	623, 1549
NmeAIII	GCCGAG	1 cut(s)	417
NmuCI	GTSAC	2 cut(s)	1261, 1612
NspI	RCATGY	4 cut(s)	574, 836, 991, 1672
PaeI	GCATGC	1 cut(s)	991
PaeR7I	CTCGAG	1 cut(s)	1055
PasI	CCCWGGG	1 cut(s)	1552
PciI	ACATGT	1 cut(s)	1668
PcsI	WCGNNNNNNNCGW	2 cut(s)	444, 1341
PfeI	GAWTC	4 cut(s)	127, 349, 677, 1657
PflFI	GACNNNGTC	1 cut(s)	1357
PleI	GAGTC	1 cut(s)	960
PmaCI	CACGTG	1 cut(s)	333
PmlI	CACGTG	1 cut(s)	333
PpsI	GAGTC	1 cut(s)	960
Ppu21I	YACGTR	1 cut(s)	333
PscI	ACATGT	1 cut(s)	1668
PshBI	ATTAAT	1 cut(s)	42
PsiI	TTATAA	1 cut(s)	861
Psp124BI	GAGCTC	2 cut(s)	216, 269
Psp1406I	AACGTT	1 cut(s)	399
Psp6I	CCWGG	2 cut(s)	774, 1551
PspCI	CACGTG	1 cut(s)	333
PspFI	CCCAGC	1 cut(s)	1091
PspGI	CCWGG	2 cut(s)	774, 1551
PspN4I	GGNNCC	2 cut(s)	623, 1549
PstI	CTGCAG	2 cut(s)	591, 700
PsuI	RGATCY	2 cut(s)	242, 621
PsyI	GACNNNGTC	1 cut(s)	1357
RsaI	GTAC	5 cut(s)	144, 308, 806, 970, 1067
RsaNI	GTAC	5 cut(s)	143, 307, 805, 969, 1066
RseI	CAYNNNNRTG	2 cut(s)	100, 1304
SacI	GAGCTC	2 cut(s)	216, 269
SacII	CCGCGG	1 cut(s)	816
SaqAI	TTAA	4 cut(s)	42, 56, 155, 1479
Sau3AI	GATC	4 cut(s)	242, 600, 621, 1599
ScaI	AGTACT	1 cut(s)	144
SchI	GAGTC	1 cut(s)	961
ScrFI	CCNGG	2 cut(s)	776, 1553
SduI	GDGCHC	3 cut(s)	216, 269, 1552
SfaNI	GCATC	5 cut(s)	442, 489, 795, 896, 1425
SfcI	CTRYAG	2 cut(s)	587, 696
Sfr274I	CTCGAG	1 cut(s)	1055
Sfr303I	CCGCGG	1 cut(s)	816
SgrBI	CCGCGG	1 cut(s)	816
SlaI	CTCGAG	1 cut(s)	1055
SmiMI	CAYNNNNRTG	2 cut(s)	100, 1304
SmlI	CTYRAG	1 cut(s)	1055
SmoI	CTYRAG	1 cut(s)	1055
SpeI	ACTAGT	1 cut(s)	259
SphI	GCATGC	1 cut(s)	991
Sse9I	AATT	5 cut(s)	43, 152, 751, 767, 1113
SsiI	CCGC	8 cut(s)	358, 429, 524, 702, 813, 815, 1223, 1242
SspMI	CTAG	3 cut(s)	260, 575, 671
SstI	GAGCTC	2 cut(s)	216, 269
StyD4I	CCNGG	2 cut(s)	774, 1551
StyI	CCWWGG	4 cut(s)	670, 956, 1119, 1512
TaaI	ACNGT	4 cut(s)	136, 317, 1357, 1597
TaiI	ACGT	5 cut(s)	328, 335, 402, 970, 1485
TaqI	TCGA	4 cut(s)	165, 339, 447, 1056
TasI	AATT	5 cut(s)	43, 152, 751, 767, 1113
TatI	WGTACW	1 cut(s)	142
TauI	GCSGC	3 cut(s)	704, 818, 1244
TfiI	GAWTC	4 cut(s)	127, 349, 677, 1657
Tru1I	TTAA	4 cut(s)	42, 56, 155, 1479
Tru9I	TTAA	4 cut(s)	42, 56, 155, 1479
TscAI	CASTG	4 cut(s)	141, 205, 381, 1602
TseFI	GTSAC	2 cut(s)	1261, 1612
TseI	GCWGC	7 cut(s)	365, 455, 589, 698, 818, 1187, 1190
Tsp45I	GTSAC	2 cut(s)	1261, 1612
TspDTI	ATGAA	4 cut(s)	237, 625, 1153, 1267
TspGWI	ACGGA	1 cut(s)	294
TspRI	CASTG	4 cut(s)	141, 205, 381, 1602
Tth111I	GACNNNGTC	1 cut(s)	1357
VspI	ATTAAT	1 cut(s)	42
XapI	RAATTY	1 cut(s)	767
XceI	RCATGY	4 cut(s)	574, 836, 991, 1672
XhoI	CTCGAG	1 cut(s)	1055
XmaJI	CCTAGG	1 cut(s)	670
XspI	CTAG	3 cut(s)	260, 575, 671
ZrmI	AGTACT	1 cut(s)	144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.