ER-associated misfolded protein catabolic process
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g07990 FvH4_2g08010 FvH4_2g08010 FvH4_2g08010 FvH4_2g08010 |
| malus_domestica | MD10G1082400.v1.1 |
| prunus_persica | Prupe.8G105100_v2.0.a1 Prupe.8G105200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0262471 |
| rosa_laevigata | RLG00000014420 RLG00000014423 |
| rosa_multiflora | Rmu_co8005002.1_g000001 Rmu_sc0000596.1_g000013 Rmu_sc0010432.1_g000001 |
| rosa_roxburghii | Rroxscaffold_177G00434410 Rroxscaffold_177G00434440 Rroxscaffold_7G00205190 Rroxscaffold_7G00205230 |
| rosa_rugosa | Rorug05G0597700 Rorug05G0597700 Rorug05G0597800 Rorug05G0597800 Rorug05G0597800 Rorug05G0597800 Rorug05G0597900 |
| rosa_samantha | Rh6AG119000 Rh6BG113000 Rh6CG110700 Rh6CG111300 Rh6DG101000 |
| rosa_wichuraiana | Rw6G010280 Rw6G010700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 729 |
| Acc65I | GGTACC | 1 cut(s) | 1567 |
| AccB1I | GGYRCC | 3 cut(s) | 616, 867, 1567 |
| AccBSI | CCGCTC | 1 cut(s) | 1274 |
| AciI | CCGC | 3 cut(s) | 1274, 1978, 2229 |
| AclWI | GGATC | 6 cut(s) | 599, 746, 759, 776, 912, 1621 |
| AcoI | YGGCCR | 1 cut(s) | 367 |
| AcsI | RAATTY | 9 cut(s) | 296, 594, 1422, 1649, 1699, 2096, 2511, 2811, 2876 |
| AcuI | CTGAAG | 4 cut(s) | 150, 165, 1046, 1656 |
| AfaI | GTAC | 6 cut(s) | 214, 1134, 1435, 1569, 2319, 2671 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1182, 1183, 1711, 1712, 1861, 1977 |
| AflII | CTTAAG | 1 cut(s) | 148 |
| AflIII | ACRYGT | 2 cut(s) | 947, 2170 |
| AgeI | ACCGGT | 1 cut(s) | 505 |
| AjiI | CACGTC | 1 cut(s) | 1903 |
| AjnI | CCWGG | 4 cut(s) | 607, 1377, 1563, 1860 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2868, 2900 |
| Alw21I | GWGCWC | 4 cut(s) | 961, 2660, 2781, 2836 |
| Alw26I | GTCTC | 4 cut(s) | 161, 711, 1576, 1796 |
| Alw44I | GTGCAC | 1 cut(s) | 2777 |
| AlwI | GGATC | 6 cut(s) | 599, 746, 759, 776, 912, 1621 |
| AoxI | GGCC | 3 cut(s) | 367, 1968, 2826 |
| ApaLI | GTGCAC | 1 cut(s) | 2777 |
| ApeKI | GCWGC | 5 cut(s) | 1439, 1596, 2391, 2496, 2586 |
| ApoI | RAATTY | 9 cut(s) | 296, 594, 1422, 1649, 1699, 2096, 2511, 2811, 2876 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1575, 1607 |
| AseI | ATTAAT | 1 cut(s) | 2708 |
| AsiGI | ACCGGT | 1 cut(s) | 505 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 45, 578, 594, 1729 |
| Asp718I | GGTACC | 1 cut(s) | 1567 |
| AspLEI | GCGC | 1 cut(s) | 1377 |
| AspS9I | GGNCC | 1 cut(s) | 2826 |
| AsuC2I | CCSGG | 2 cut(s) | 253, 1042 |
| AsuHPI | GGTGA | 5 cut(s) | 574, 803, 1863, 1925, 2471 |
| BaeGI | GKGCMC | 3 cut(s) | 621, 1503, 2781 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1559, 1592 |
| BamHI | GGATCC | 1 cut(s) | 751 |
| BanI | GGYRCC | 3 cut(s) | 616, 867, 1567 |
| BanII | GRGCYC | 1 cut(s) | 2660 |
| BbsI | GAAGAC | 4 cut(s) | 1034, 1054, 1675, 2640 |
| Bbv12I | GWGCWC | 4 cut(s) | 961, 2660, 2781, 2836 |
| BbvI | GCAGC | 5 cut(s) | 1426, 1608, 2378, 2508, 2573 |
| BccI | CCATC | 5 cut(s) | 521, 1293, 2282, 2609, 2802 |
| BceAI | ACGGC | 1 cut(s) | 354 |
| BciT130I | CCWGG | 4 cut(s) | 609, 1379, 1565, 1862 |
| BcnI | CCSGG | 2 cut(s) | 253, 1042 |
| BcoDI | GTCTC | 4 cut(s) | 161, 711, 1576, 1796 |
| BfaI | CTAG | 7 cut(s) | 59, 1004, 1052, 2039, 2330, 2726, 2840 |
| BfoI | RGCGCY | 1 cut(s) | 1378 |
| BfrI | CTTAAG | 1 cut(s) | 148 |
| BfuAI | ACCTGC | 1 cut(s) | 729 |
| BglII | AGATCT | 4 cut(s) | 1231, 1819, 2690, 2759 |
| BisI | GCNGC | 6 cut(s) | 1440, 1597, 1979, 2392, 2497, 2587 |
| BlpI | GCTNAGC | 1 cut(s) | 2360 |
| BlsI | GCNGC | 6 cut(s) | 1441, 1598, 1980, 2393, 2498, 2588 |
| Bme1390I | CCNGG | 6 cut(s) | 253, 609, 1042, 1379, 1565, 1862 |
| BmgBI | CACGTC | 1 cut(s) | 1903 |
| BmgT120I | GGNCC | 1 cut(s) | 2826 |
| BmiI | GGNNCC | 5 cut(s) | 618, 753, 869, 1569, 2733 |
| BmrFI | CCNGG | 6 cut(s) | 253, 609, 1042, 1379, 1565, 1862 |
| BmsI | GCATC | 6 cut(s) | 14, 82, 552, 896, 1191, 1465 |
| BoxI | GACNNNNGTC | 1 cut(s) | 67 |
| BpiI | GAAGAC | 4 cut(s) | 1034, 1054, 1675, 2640 |
| BpmI | CTGGAG | 2 cut(s) | 895, 2682 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2360 |
| BpuEI | CTTGAG | 4 cut(s) | 713, 2394, 2748, 2888 |
| BpuMI | CCSGG | 2 cut(s) | 253, 1042 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1394 |
| BsaI | GGTCTC | 2 cut(s) | 711, 1576 |
| BsaJI | CCNNGG | 7 cut(s) | 466, 585, 651, 1177, 1563, 1571, 2884 |
| BsaWI | WCCGGW | 1 cut(s) | 505 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 893, 923 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1182, 1183, 1711, 1712, 1861, 1977 |
| Bse118I | RCCGGY | 3 cut(s) | 505, 870, 2828 |
| Bse1I | ACTGG | 6 cut(s) | 84, 528, 1464, 1483, 1650, 2735 |
| Bse3DI | GCAATG | 1 cut(s) | 1338 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1394 |
| BseBI | CCWGG | 4 cut(s) | 609, 1379, 1565, 1862 |
| BseDI | CCNNGG | 7 cut(s) | 466, 585, 651, 1177, 1563, 1571, 2884 |
| BseGI | GGATG | 7 cut(s) | 532, 1387, 1395, 1480, 2182, 2293, 2623 |
| BseJI | GATNNNNATC | 1 cut(s) | 1394 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1182, 1183, 1711, 1712, 1861, 1977 |
| BseMI | GCAATG | 1 cut(s) | 1338 |
| BseNI | ACTGG | 6 cut(s) | 84, 528, 1464, 1483, 1650, 2735 |
| BseSI | GKGCMC | 3 cut(s) | 621, 1503, 2781 |
| BseXI | GCAGC | 5 cut(s) | 1426, 1608, 2378, 2508, 2573 |
| BsgI | GTGCAG | 1 cut(s) | 1812 |
| BshFI | GGCC | 3 cut(s) | 369, 1970, 2828 |
| BshNI | GGYRCC | 3 cut(s) | 616, 867, 1567 |
| BshTI | ACCGGT | 1 cut(s) | 505 |
| BsiHKAI | GWGCWC | 4 cut(s) | 961, 2660, 2781, 2836 |
| BsiSI | CCGG | 5 cut(s) | 253, 506, 871, 1041, 2829 |
| BslFI | GGGAC | 4 cut(s) | 1063, 1199, 2546, 2877 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1182, 1183, 1711, 1712, 1861, 1977 |
| BsmAI | GTCTC | 4 cut(s) | 161, 711, 1576, 1796 |
| BsmFI | GGGAC | 4 cut(s) | 1063, 1199, 2546, 2877 |
| BsmI | GAATGC | 1 cut(s) | 2474 |
| BsnI | GGCC | 3 cut(s) | 369, 1970, 2828 |
| Bso31I | GGTCTC | 2 cut(s) | 711, 1576 |
| Bsp1286I | GDGCHC | 6 cut(s) | 621, 961, 1503, 2660, 2781, 2836 |
| Bsp1407I | TGTACA | 1 cut(s) | 2317 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2360 |
| Bsp19I | CCATGG | 2 cut(s) | 466, 585 |
| BspACI | CCGC | 3 cut(s) | 1274, 1978, 2229 |
| BspANI | GGCC | 3 cut(s) | 369, 1970, 2828 |
| BspLI | GGNNCC | 5 cut(s) | 618, 753, 869, 1569, 2733 |
| BspMI | ACCTGC | 1 cut(s) | 729 |
| BspPI | GGATC | 6 cut(s) | 599, 746, 759, 776, 912, 1621 |
| BspQI | GCTCTTC | 2 cut(s) | 126, 2841 |
| BspT107I | GGYRCC | 3 cut(s) | 616, 867, 1567 |
| BspTI | CTTAAG | 1 cut(s) | 148 |
| BspTNI | GGTCTC | 2 cut(s) | 711, 1576 |
| BsrBI | CCGCTC | 1 cut(s) | 1274 |
| BsrDI | GCAATG | 1 cut(s) | 1338 |
| BsrFI | RCCGGY | 3 cut(s) | 505, 870, 2828 |
| BsrGI | TGTACA | 1 cut(s) | 2317 |
| BsrI | ACTGG | 6 cut(s) | 84, 528, 1464, 1483, 1650, 2735 |
| BssAI | RCCGGY | 3 cut(s) | 505, 870, 2828 |
| BssECI | CCNNGG | 7 cut(s) | 466, 585, 651, 1177, 1563, 1571, 2884 |
| BssT1I | CCWWGG | 5 cut(s) | 466, 585, 1177, 1571, 2884 |
| Bst2UI | CCWGG | 4 cut(s) | 609, 1379, 1565, 1862 |
| Bst6I | CTCTTC | 3 cut(s) | 126, 1632, 2841 |
| BstAFI | CTTAAG | 1 cut(s) | 148 |
| BstAUI | TGTACA | 1 cut(s) | 2317 |
| BstC8I | GCNNGC | 7 cut(s) | 541, 648, 1151, 1948, 2001, 2130, 2448 |
| BstDSI | CCRYGG | 3 cut(s) | 466, 585, 651 |
| BstF5I | GGATG | 7 cut(s) | 532, 1387, 1395, 1480, 2182, 2293, 2623 |
| BstH2I | RGCGCY | 1 cut(s) | 1378 |
| BstHHI | GCGC | 1 cut(s) | 1377 |
| BstMAI | GTCTC | 4 cut(s) | 161, 711, 1576, 1796 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 632, 933, 1271 |
| BstNI | CCWGG | 4 cut(s) | 609, 1379, 1565, 1862 |
| BstNSI | RCATGY | 4 cut(s) | 951, 2174, 2359, 2676 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 67 |
| BstSCI | CCNGG | 6 cut(s) | 251, 607, 1040, 1377, 1563, 1860 |
| BstSLI | GKGCMC | 3 cut(s) | 621, 1503, 2781 |
| BstV1I | GCAGC | 5 cut(s) | 1426, 1608, 2378, 2508, 2573 |
| BstV2I | GAAGAC | 4 cut(s) | 1034, 1054, 1675, 2640 |
| BstX2I | RGATCY | 8 cut(s) | 604, 751, 781, 917, 1231, 1819, 2690, 2759 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 352 |
| BstYI | RGATCY | 8 cut(s) | 604, 751, 781, 917, 1231, 1819, 2690, 2759 |
| BsuRI | GGCC | 3 cut(s) | 369, 1970, 2828 |
| BtgI | CCRYGG | 3 cut(s) | 466, 585, 651 |
| BtgZI | GCGATG | 1 cut(s) | 459 |
| BtrI | CACGTC | 1 cut(s) | 1903 |
| BtsCI | GGATG | 7 cut(s) | 532, 1387, 1395, 1480, 2182, 2293, 2623 |
| BtsI | GCAGTG | 1 cut(s) | 922 |
| BtsIMutI | CAGTG | 6 cut(s) | 177, 521, 635, 922, 1449, 1476 |
| BveI | ACCTGC | 1 cut(s) | 729 |
| Cac8I | GCNNGC | 7 cut(s) | 541, 648, 1151, 1948, 2001, 2130, 2448 |
| CfoI | GCGC | 1 cut(s) | 1377 |
| Cfr10I | RCCGGY | 3 cut(s) | 505, 870, 2828 |
| Cfr13I | GGNCC | 1 cut(s) | 2826 |
| CseI | GACGC | 1 cut(s) | 2543 |
| CsiI | ACCWGGT | 1 cut(s) | 1860 |
| Csp6I | GTAC | 6 cut(s) | 213, 1133, 1434, 1568, 2318, 2670 |
| CspAI | ACCGGT | 1 cut(s) | 505 |
| CviQI | GTAC | 6 cut(s) | 213, 1133, 1434, 1568, 2318, 2670 |
| EaeI | YGGCCR | 1 cut(s) | 367 |
| Eam1104I | CTCTTC | 3 cut(s) | 126, 1632, 2841 |
| EarI | CTCTTC | 3 cut(s) | 126, 1632, 2841 |
| Ecl136II | GAGCTC | 1 cut(s) | 2658 |
| Eco130I | CCWWGG | 5 cut(s) | 466, 585, 1177, 1571, 2884 |
| Eco24I | GRGCYC | 1 cut(s) | 2660 |
| Eco31I | GGTCTC | 2 cut(s) | 711, 1576 |
| Eco32I | GATATC | 1 cut(s) | 1898 |
| Eco53kI | GAGCTC | 1 cut(s) | 2658 |
| Eco57I | CTGAAG | 4 cut(s) | 150, 165, 1046, 1656 |
| EcoICRI | GAGCTC | 1 cut(s) | 2658 |
| EcoRI | GAATTC | 3 cut(s) | 594, 1649, 2876 |
| EcoRII | CCWGG | 4 cut(s) | 607, 1377, 1563, 1860 |
| EcoRV | GATATC | 1 cut(s) | 1898 |
| EcoT14I | CCWWGG | 5 cut(s) | 466, 585, 1177, 1571, 2884 |
| EcoT38I | GRGCYC | 1 cut(s) | 2660 |
| ErhI | CCWWGG | 5 cut(s) | 466, 585, 1177, 1571, 2884 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1161, 1193, 1930, 1962, 2621, 2653 |
| FaqI | GGGAC | 4 cut(s) | 1063, 1199, 2546, 2877 |
| FauI | CCCGC | 2 cut(s) | 1267, 2236 |
| FauNDI | CATATG | 1 cut(s) | 553 |
| Fnu4HI | GCNGC | 6 cut(s) | 1440, 1597, 1979, 2392, 2497, 2587 |
| FokI | GGATG | 7 cut(s) | 539, 1394, 1402, 1487, 2189, 2300, 2630 |
| FriOI | GRGCYC | 1 cut(s) | 2660 |
| Fsp4HI | GCNGC | 6 cut(s) | 1440, 1597, 1979, 2392, 2497, 2587 |
| FspBI | CTAG | 7 cut(s) | 59, 1004, 1052, 2039, 2330, 2726, 2840 |
| GlaI | GCGC | 1 cut(s) | 1376 |
| GluI | GCNGC | 6 cut(s) | 1440, 1597, 1979, 2392, 2497, 2587 |
| GsuI | CTGGAG | 2 cut(s) | 895, 2682 |
| HaeII | RGCGCY | 1 cut(s) | 1378 |
| HaeIII | GGCC | 3 cut(s) | 369, 1970, 2828 |
| HapII | CCGG | 5 cut(s) | 253, 506, 871, 1041, 2829 |
| HgaI | GACGC | 1 cut(s) | 2543 |
| HhaI | GCGC | 1 cut(s) | 1377 |
| Hin6I | GCGC | 1 cut(s) | 1375 |
| HinP1I | GCGC | 1 cut(s) | 1375 |
| HincII | GTYRAC | 4 cut(s) | 882, 1407, 2149, 2428 |
| HindII | GTYRAC | 4 cut(s) | 882, 1407, 2149, 2428 |
| HindIII | AAGCTT | 1 cut(s) | 2126 |
| HpaII | CCGG | 5 cut(s) | 253, 506, 871, 1041, 2829 |
| HphI | GGTGA | 5 cut(s) | 574, 803, 1863, 1925, 2471 |
| Hpy166II | GTNNAC | 6 cut(s) | 882, 1407, 1783, 2149, 2428, 2779 |
| Hpy8I | GTNNAC | 6 cut(s) | 882, 1407, 1783, 2149, 2428, 2779 |
| Hpy99I | CGWCG | 1 cut(s) | 1907 |
| HpyCH4IV | ACGT | 2 cut(s) | 1902, 2241 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 632, 933, 1271 |
| HpySE526I | ACGT | 2 cut(s) | 1902, 2241 |
| HspAI | GCGC | 1 cut(s) | 1375 |
| KpnI | GGTACC | 1 cut(s) | 1571 |
| LguI | GCTCTTC | 2 cut(s) | 126, 2841 |
| LmnI | GCTCC | 1 cut(s) | 956 |
| Lsp1109I | GCAGC | 5 cut(s) | 1426, 1608, 2378, 2508, 2573 |
| LweI | GCATC | 6 cut(s) | 14, 82, 552, 896, 1191, 1465 |
| MabI | ACCWGGT | 1 cut(s) | 1860 |
| MaeI | CTAG | 7 cut(s) | 59, 1004, 1052, 2039, 2330, 2726, 2840 |
| MaeII | ACGT | 2 cut(s) | 1902, 2241 |
| MaeIII | GTNAC | 4 cut(s) | 440, 899, 1864, 2267 |
| MbiI | CCGCTC | 1 cut(s) | 1274 |
| MfeI | CAATTG | 2 cut(s) | 627, 2500 |
| MflI | RGATCY | 8 cut(s) | 604, 751, 781, 917, 1231, 1819, 2690, 2759 |
| MhlI | GDGCHC | 6 cut(s) | 621, 961, 1503, 2660, 2781, 2836 |
| MlyI | GAGTC | 5 cut(s) | 1166, 1181, 1295, 2020, 2433 |
| MroXI | GAANNNNTTC | 4 cut(s) | 45, 578, 594, 1729 |
| MslI | CAYNNNNRTG | 3 cut(s) | 350, 1876, 2175 |
| MspA1I | CMGCKG | 1 cut(s) | 1439 |
| MspCI | CTTAAG | 1 cut(s) | 148 |
| MspI | CCGG | 5 cut(s) | 253, 506, 871, 1041, 2829 |
| MspR9I | CCNGG | 6 cut(s) | 253, 609, 1042, 1379, 1565, 1862 |
| MunI | CAATTG | 2 cut(s) | 627, 2500 |
| Mva1269I | GAATGC | 1 cut(s) | 2474 |
| MvaI | CCWGG | 4 cut(s) | 609, 1379, 1565, 1862 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 632, 933, 1271 |
| NciI | CCSGG | 2 cut(s) | 253, 1042 |
| NcoI | CCATGG | 2 cut(s) | 466, 585 |
| NdeI | CATATG | 1 cut(s) | 553 |
| NlaIV | GGNNCC | 5 cut(s) | 618, 753, 869, 1569, 2733 |
| NmuCI | GTSAC | 1 cut(s) | 2267 |
| NspI | RCATGY | 4 cut(s) | 951, 2174, 2359, 2676 |
| PciI | ACATGT | 2 cut(s) | 947, 2170 |
| PciSI | GCTCTTC | 2 cut(s) | 126, 2841 |
| PctI | GAATGC | 1 cut(s) | 2474 |
| PdmI | GAANNNNTTC | 4 cut(s) | 45, 578, 594, 1729 |
| PfeI | GAWTC | 8 cut(s) | 187, 395, 931, 1339, 1395, 1885, 2276, 2546 |
| PfoI | TCCNGGA | 2 cut(s) | 607, 1040 |
| PinAI | ACCGGT | 1 cut(s) | 505 |
| PkrI | GCNGC | 6 cut(s) | 1441, 1598, 1980, 2393, 2498, 2588 |
| PleI | GAGTC | 5 cut(s) | 1166, 1181, 1295, 2019, 2432 |
| PpsI | GAGTC | 5 cut(s) | 1166, 1181, 1295, 2019, 2432 |
| PscI | ACATGT | 2 cut(s) | 947, 2170 |
| PshAI | GACNNNNGTC | 1 cut(s) | 67 |
| PshBI | ATTAAT | 1 cut(s) | 2708 |
| Psp124BI | GAGCTC | 1 cut(s) | 2660 |
| Psp6I | CCWGG | 4 cut(s) | 607, 1377, 1563, 1860 |
| PspGI | CCWGG | 4 cut(s) | 607, 1377, 1563, 1860 |
| PspN4I | GGNNCC | 5 cut(s) | 618, 753, 869, 1569, 2733 |
| PspPI | GGNCC | 1 cut(s) | 2826 |
| PsuI | RGATCY | 8 cut(s) | 604, 751, 781, 917, 1231, 1819, 2690, 2759 |
| PvuII | CAGCTG | 1 cut(s) | 1439 |
| RsaI | GTAC | 6 cut(s) | 214, 1134, 1435, 1569, 2319, 2671 |
| RsaNI | GTAC | 6 cut(s) | 213, 1133, 1434, 1568, 2318, 2670 |
| RseI | CAYNNNNRTG | 3 cut(s) | 350, 1876, 2175 |
| SacI | GAGCTC | 1 cut(s) | 2660 |
| SapI | GCTCTTC | 2 cut(s) | 126, 2841 |
| SatI | GCNGC | 6 cut(s) | 1440, 1597, 1979, 2392, 2497, 2587 |
| Sau96I | GGNCC | 1 cut(s) | 2826 |
| SchI | GAGTC | 5 cut(s) | 1166, 1181, 1295, 2020, 2433 |
| ScrFI | CCNGG | 6 cut(s) | 253, 609, 1042, 1379, 1565, 1862 |
| SduI | GDGCHC | 6 cut(s) | 621, 961, 1503, 2660, 2781, 2836 |
| SexAI | ACCWGGT | 1 cut(s) | 1860 |
| SfaNI | GCATC | 6 cut(s) | 14, 82, 552, 896, 1191, 1465 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 350, 1876, 2175 |
| SmlI | CTYRAG | 5 cut(s) | 148, 692, 2409, 2763, 2867 |
| SmoI | CTYRAG | 5 cut(s) | 148, 692, 2409, 2763, 2867 |
| SsiI | CCGC | 3 cut(s) | 1274, 1978, 2229 |
| SspI | AATATT | 2 cut(s) | 319, 2254 |
| SspMI | CTAG | 7 cut(s) | 59, 1004, 1052, 2039, 2330, 2726, 2840 |
| SstI | GAGCTC | 1 cut(s) | 2660 |
| StyD4I | CCNGG | 6 cut(s) | 251, 607, 1040, 1377, 1563, 1860 |
| StyI | CCWWGG | 5 cut(s) | 466, 585, 1177, 1571, 2884 |
| TaiI | ACGT | 2 cut(s) | 1905, 2244 |
| TaqI | TCGA | 4 cut(s) | 322, 823, 890, 1304 |
| TatI | WGTACW | 2 cut(s) | 1433, 2317 |
| TauI | GCSGC | 1 cut(s) | 1981 |
| TfiI | GAWTC | 8 cut(s) | 187, 395, 931, 1339, 1395, 1885, 2276, 2546 |
| TscAI | CASTG | 6 cut(s) | 177, 528, 642, 929, 1456, 1476 |
| TseFI | GTSAC | 1 cut(s) | 2267 |
| TseI | GCWGC | 5 cut(s) | 1439, 1596, 2391, 2496, 2586 |
| Tsp45I | GTSAC | 1 cut(s) | 2267 |
| TspGWI | ACGGA | 2 cut(s) | 668, 1684 |
| TspRI | CASTG | 6 cut(s) | 177, 528, 642, 929, 1456, 1476 |
| Vha464I | CTTAAG | 1 cut(s) | 148 |
| VneI | GTGCAC | 1 cut(s) | 2777 |
| VspI | ATTAAT | 1 cut(s) | 2708 |
| XapI | RAATTY | 9 cut(s) | 296, 594, 1422, 1649, 1699, 2096, 2511, 2811, 2876 |
| XbaI | TCTAGA | 1 cut(s) | 2725 |
| XceI | RCATGY | 4 cut(s) | 951, 2174, 2359, 2676 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1456, 2382 |
| XmnI | GAANNNNTTC | 4 cut(s) | 45, 578, 594, 1729 |
| XspI | CTAG | 7 cut(s) | 59, 1004, 1052, 2039, 2330, 2726, 2840 |