Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0004525

Physical Location & Seq

Genomic Coordinates Reverse (-)

79559815 .. 79561395

Gene Structure 1581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0597900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGAAGGAGGTGATGTCCTTTCTGGTGAGGAGGTGCTACAGCCTGAAACACATCCAGCAAGCTCATGGGTTGATGGTACCCCGAGGCCTTGACGAGGACAACAGACTCCTTTCCCGATTCATCGAGGCCTGCTCTTGTCTTGGCTTCTCGAACTACGCCTACTCCGTCTTCACCCGCATTCGGGTGCCAAACATTTATCTCTACAACACCATGATCAAGGCTCTACCTCCATCCGAGGCCATTTCTGTTTACAACAAAATTCAAGTCGCCGCCTTGCGCCCCGATAACTACTCCATCCCCTTTGTGCTCAAGGCCGTCGTTCGCCTCGGCCTCGCCGCAGTTGGGATAGGCAGACAGGTCCACTGCCATAGCATTGGCACTGGGCTGGACACCCACGTCAGCGTGGTCACTGCCCTCATTCACATGTATTCCTCTTGCGCATCTGTTTCCGATGCTCGCAGACTGTTCGACGGAGCTGCCTTTAGGGATGTCGCTCTCTGGAACGCAATGATCGCCGGATATGCCAAACTGGGTGACGTAGATACTGCCCGCCATCTGTTCGAAACAATGCCTCTCAATAATAGCAATGTCATTTCCTGGACTGCCCTCATTGCCGGATATGCTCAGGTCAACCGCCCCACCGACGCCATCATGGTCTTCCGGAGAATGCAGCTTCACAATGTTCAACCTGATGAGATAGCAATGTTGGCCGCGCTTTCTGCTTGTGCCCAGTTAGGTGCCCTCCACTTTGGGGAGTGGATTCATAACTACATTCAGAAACATGGATTTCGTGAGCTGGTTTCTCTTAACAATGCTCTTATAGACATGTACGCCAAGTCCGGCAACATAAGAAAAGCCCTTCAAGTTTTCCATAGTACCAAATATAAAACTGTTATAACTTGGACGACCATGATAGCTGGACTTGCCCTGCATGGTCTTGGAACACAAGCCCTTGACATGTTTGCTCAAATGGAAAGGGCTAAAATTGCACCCAACGACATCACTTTCATTGCCATCCTTTCTGCTTGTAGCCATGCCCGGTTGGTTGAAACGGGCCTTTGCTATTTTAACATCATGGTTTCGAGGTATCGGATTGAACCCAAAATTGTGCACTATGGCTGCATGGTTGATCTACTTGGGCGTGCCGGTTATCTTCAAGAGGCAAAGGAACTTGTTAGGCAGATGCCATTTGAAGCAAATGCGGCTATATGGGGGTCTCTTCTTGCTGCTTCTAACATTCATGGAAATGATGAGCTCGGGGAGCATGCTTTACAGCATCTATTAATGTTAGAGCCCCAGAATAGTGGAAATTATTCACTTTTGTCTAATATATATACTGCTCTGGGTAGGTGGAATAAATCTAGGATGCTAAGGAAAGTGATGAGGGACAATGGTGTGAAGAAGATGCCAGGCAGGAGTTTCATAGAAGTGAATAGCAGAGTTCATGGATTCATTGCAGGAGACAAATCACATTCCGAGGGAGATAGGATATATGAAGTCCTGTACAAGCTTTTCAGGCAGTCTAAATTGGCTGGCCGTCCGCAACAAGATTGTGGGGAGCTGCTTGAATTCGATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

526

Amino Acids

58.91

Weight (kDa)

9.08

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	196 - 243	1.2e-07	PPR repeat family
PPR_2	PF13041	297 - 344	1.7e-09	PPR repeat family
E_motif	PF20431	414 - 476	1.8e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004525)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g07990 FvH4_2g08010 FvH4_2g08010 FvH4_2g08010 FvH4_2g08010
malus_domestica	MD10G1082400.v1.1
prunus_persica	Prupe.8G105100_v2.0.a1 Prupe.8G105200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0262471
rosa_laevigata	RLG00000014420 RLG00000014423
rosa_multiflora	Rmu_co8005002.1_g000001 Rmu_sc0000596.1_g000013 Rmu_sc0010432.1_g000001
rosa_roxburghii	Rroxscaffold_177G00434410 Rroxscaffold_177G00434440 Rroxscaffold_7G00205190 Rroxscaffold_7G00205230
rosa_rugosa	Rorug05G0597700 Rorug05G0597700 Rorug05G0597800 Rorug05G0597800 Rorug05G0597800 Rorug05G0597800 Rorug05G0597900
rosa_samantha	Rh6AG119000 Rh6BG113000 Rh6CG110700 Rh6CG111300 Rh6DG101000
rosa_wichuraiana	Rw6G010280 Rw6G010700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	896
AasI	GACNNNNNNGTC	1 cut(s)	395
Acc16I	TGCGCA	1 cut(s)	439
Acc65I	GGTACC	1 cut(s)	76
AccB1I	GGYRCC	3 cut(s)	76, 184, 737
AccII	CGCG	1 cut(s)	713
AccIII	TCCGGA	1 cut(s)	660
AciI	CCGC	8 cut(s)	175, 270, 336, 550, 634, 711, 1202, 1541
AcoI	YGGCCR	2 cut(s)	708, 1534
AcsI	RAATTY	2 cut(s)	258, 1568
AcyI	GRCGYC	1 cut(s)	645
AfaI	GTAC	4 cut(s)	78, 830, 877, 1505
AfiI	CCNNNNNNNGG	5 cut(s)	94, 180, 181, 342, 751
AflIII	ACRYGT	3 cut(s)	423, 825, 957
AgsI	TTSAA	8 cut(s)	263, 686, 863, 1049, 1097, 1157, 1193, 1568
AjiI	CACGTC	1 cut(s)	397
AjnI	CCWGG	2 cut(s)	596, 1408
AluBI	AGCT	8 cut(s)	62, 476, 673, 796, 917, 1255, 1510, 1561
AluI	AGCT	8 cut(s)	62, 476, 673, 796, 917, 1255, 1510, 1561
Alw21I	GWGCWC	3 cut(s)	309, 1113, 1257
Alw26I	GTCTC	2 cut(s)	1221, 1455
Alw44I	GTGCAC	1 cut(s)	1109
Ama87I	CYCGRG	2 cut(s)	81, 1256
Aor13HI	TCCGGA	1 cut(s)	660
AoxI	GGCC	8 cut(s)	85, 126, 237, 312, 328, 708, 1054, 1534
ApaLI	GTGCAC	1 cut(s)	1109
ApeKI	GCWGC	5 cut(s)	476, 670, 1119, 1226, 1561
ApoI	RAATTY	2 cut(s)	258, 1568
ArsI	GACNNNNNNTTYG	2 cut(s)	249, 281
AseI	ATTAAT	1 cut(s)	1283
Asp700I	GAANNNNTTC	1 cut(s)	1312
Asp718I	GGTACC	1 cut(s)	76
AspLEI	GCGC	3 cut(s)	279, 440, 715
AspS9I	GGNCC	2 cut(s)	358, 1054
AsuC2I	CCSGG	1 cut(s)	1039
AsuHPI	GGTGA	4 cut(s)	22, 37, 163, 545
AsuII	TTCGAA	1 cut(s)	561
AvaI	CYCGRG	2 cut(s)	81, 1256
AvaII	GGWCC	1 cut(s)	358
BaeGI	GKGCMC	3 cut(s)	730, 742, 1113
BanI	GGYRCC	3 cut(s)	76, 184, 737
BanII	GRGCYC	2 cut(s)	1257, 1296
BbsI	GAAGAC	2 cut(s)	160, 649
Bbv12I	GWGCWC	3 cut(s)	309, 1113, 1257
BbvI	GCAGC	5 cut(s)	463, 682, 1106, 1213, 1548
BccI	CCATC	6 cut(s)	67, 238, 302, 561, 656, 1022
BceAI	ACGGC	2 cut(s)	299, 1521
BcgI	CGANNNNNNTGC	4 cut(s)	448, 458, 482, 492
BciT130I	CCWGG	2 cut(s)	598, 1410
BclI	TGATCA	1 cut(s)	213
BcnI	CCSGG	1 cut(s)	1039
BcoDI	GTCTC	2 cut(s)	1221, 1455
BfaI	CTAG	1 cut(s)	1362
BfmI	CTRYAG	1 cut(s)	37
BisI	GCNGC	9 cut(s)	270, 336, 477, 671, 711, 1120, 1203, 1227, 1562
BlsI	GCNGC	9 cut(s)	271, 337, 478, 672, 712, 1121, 1204, 1228, 1563
Bme1390I	CCNGG	3 cut(s)	598, 1039, 1410
Bme18I	GGWCC	1 cut(s)	358
BmeT110I	CYCGRG	2 cut(s)	81, 1256
BmgBI	CACGTC	1 cut(s)	397
BmgT120I	GGNCC	2 cut(s)	358, 1054
BmiI	GGNNCC	3 cut(s)	78, 186, 739
BmrFI	CCNGG	3 cut(s)	598, 1039, 1410
BmrI	ACTGGG	3 cut(s)	390, 539, 724
BmsI	GCATC	6 cut(s)	442, 449, 1173, 1285, 1356, 1395
BmuI	ACTGGG	3 cut(s)	390, 539, 724
BpiI	GAAGAC	2 cut(s)	160, 649
BplI	GAGNNNNNCTC	2 cut(s)	116, 148
Bpu10I	CCTNAGC	2 cut(s)	624, 1370
Bpu14I	TTCGAA	1 cut(s)	561
BpuEI	CTTGAG	1 cut(s)	293
BpuMI	CCSGG	1 cut(s)	1039
BsaHI	GRCGYC	1 cut(s)	645
BsaI	GGTCTC	1 cut(s)	1221
BsaJI	CCNNGG	4 cut(s)	82, 234, 325, 1476
BsaWI	WCCGGW	1 cut(s)	660
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 146, 176
Bsc4I	CCNNNNNNNGG	5 cut(s)	94, 180, 181, 342, 751
Bse118I	RCCGGY	1 cut(s)	1145
Bse1I	ACTGG	3 cut(s)	385, 534, 730
Bse3DI	GCAATG	6 cut(s)	513, 592, 609, 708, 1008, 1452
BseAI	TCCGGA	1 cut(s)	660
BseBI	CCWGG	2 cut(s)	598, 1410
BseDI	CCNNGG	4 cut(s)	82, 234, 325, 1476
BseGI	GGATG	6 cut(s)	51, 230, 294, 493, 1014, 1371
BseLI	CCNNNNNNNGG	5 cut(s)	94, 180, 181, 342, 751
BseMI	GCAATG	6 cut(s)	513, 592, 609, 708, 1008, 1452
BseMII	CTCAG	1 cut(s)	638
BseNI	ACTGG	3 cut(s)	385, 534, 730
BseRI	GAGGAG	1 cut(s)	43
BseSI	GKGCMC	3 cut(s)	730, 742, 1113
BseXI	GCAGC	5 cut(s)	463, 682, 1106, 1213, 1548
Bsh1236I	CGCG	1 cut(s)	713
BshFI	GGCC	8 cut(s)	87, 128, 239, 314, 330, 710, 1056, 1536
BshNI	GGYRCC	3 cut(s)	76, 184, 737
BsiHKAI	GWGCWC	3 cut(s)	309, 1113, 1257
BsiHKCI	CYCGRG	2 cut(s)	81, 1256
BsiSI	CCGG	6 cut(s)	516, 615, 661, 840, 1039, 1146
BslFI	GGGAC	1 cut(s)	1400
BslI	CCNNNNNNNGG	5 cut(s)	94, 180, 181, 342, 751
BsmAI	GTCTC	2 cut(s)	1221, 1455
BsmFI	GGGAC	1 cut(s)	1400
BsmI	GAATGC	2 cut(s)	177, 672
BsnI	GGCC	8 cut(s)	87, 128, 239, 314, 330, 710, 1056, 1536
Bso31I	GGTCTC	1 cut(s)	1221
BsoBI	CYCGRG	2 cut(s)	81, 1256
Bsp119I	TTCGAA	1 cut(s)	561
Bsp1286I	GDGCHC	6 cut(s)	309, 730, 742, 1113, 1257, 1296
Bsp13I	TCCGGA	1 cut(s)	660
Bsp1407I	TGTACA	1 cut(s)	1503
Bsp143I	GATC	3 cut(s)	213, 510, 1129
BspACI	CCGC	8 cut(s)	175, 270, 336, 550, 634, 711, 1202, 1541
BspANI	GGCC	8 cut(s)	87, 128, 239, 314, 330, 710, 1056, 1536
BspCNI	CTCAG	1 cut(s)	637
BspEI	TCCGGA	1 cut(s)	660
BspFNI	CGCG	1 cut(s)	713
BspLI	GGNNCC	3 cut(s)	78, 186, 739
BspT104I	TTCGAA	1 cut(s)	561
BspT107I	GGYRCC	3 cut(s)	76, 184, 737
BspTNI	GGTCTC	1 cut(s)	1221
BsrDI	GCAATG	6 cut(s)	513, 592, 609, 708, 1008, 1452
BsrFI	RCCGGY	1 cut(s)	1145
BsrGI	TGTACA	1 cut(s)	1503
BsrI	ACTGG	3 cut(s)	385, 534, 730
BssAI	RCCGGY	1 cut(s)	1145
BssECI	CCNNGG	4 cut(s)	82, 234, 325, 1476
BssMI	GATC	3 cut(s)	213, 510, 1129
BssNI	GRCGYC	1 cut(s)	645
Bst2UI	CCWGG	2 cut(s)	598, 1410
Bst4CI	ACNGT	2 cut(s)	465, 892
Bst6I	CTCTTC	1 cut(s)	1224
BstACI	GRCGYC	1 cut(s)	645
BstAUI	TGTACA	1 cut(s)	1503
BstBI	TTCGAA	1 cut(s)	561
BstC8I	GCNNGC	7 cut(s)	60, 130, 457, 550, 1143, 1266, 1534
BstDEI	CTNAG	2 cut(s)	624, 1370
BstENI	CCTNNNNNAGG	1 cut(s)	92
BstF5I	GGATG	6 cut(s)	51, 230, 294, 493, 1014, 1371
BstFNI	CGCG	1 cut(s)	713
BstHHI	GCGC	3 cut(s)	279, 440, 715
BstKTI	GATC	3 cut(s)	216, 513, 1132
BstMAI	GTCTC	2 cut(s)	1221, 1455
BstMBI	GATC	3 cut(s)	213, 510, 1129
BstNI	CCWGG	2 cut(s)	598, 1410
BstNSI	RCATGY	4 cut(s)	427, 829, 961, 1268
BstSCI	CCNGG	3 cut(s)	596, 1037, 1408
BstSFI	CTRYAG	1 cut(s)	37
BstSLI	GKGCMC	3 cut(s)	730, 742, 1113
BstUI	CGCG	1 cut(s)	713
BstV1I	GCAGC	5 cut(s)	463, 682, 1106, 1213, 1548
BstV2I	GAAGAC	2 cut(s)	160, 649
BstXI	CCANNNNNNTGG	2 cut(s)	374, 1304
BsuRI	GGCC	8 cut(s)	87, 128, 239, 314, 330, 710, 1056, 1536
BtrI	CACGTC	1 cut(s)	397
BtsCI	GGATG	6 cut(s)	51, 230, 294, 493, 1014, 1371
BtsI	GCAGTG	2 cut(s)	361, 408
BtsIMutI	CAGTG	3 cut(s)	361, 378, 408
Cac8I	GCNNGC	7 cut(s)	60, 130, 457, 550, 1143, 1266, 1534
CfoI	GCGC	3 cut(s)	279, 440, 715
Cfr10I	RCCGGY	1 cut(s)	1145
Cfr13I	GGNCC	2 cut(s)	358, 1054
CseI	GACGC	1 cut(s)	653
Csp6I	GTAC	4 cut(s)	77, 829, 876, 1504
CviQI	GTAC	4 cut(s)	77, 829, 876, 1504
DdeI	CTNAG	2 cut(s)	624, 1370
DpnI	GATC	3 cut(s)	215, 512, 1131
DpnII	GATC	3 cut(s)	213, 510, 1129
DrdI	GACNNNNNNGTC	1 cut(s)	395
DseDI	GACNNNNNNGTC	1 cut(s)	395
EaeI	YGGCCR	2 cut(s)	708, 1534
Eam1104I	CTCTTC	1 cut(s)	1224
EarI	CTCTTC	1 cut(s)	1224
Ecl136II	GAGCTC	1 cut(s)	1255
Eco147I	AGGCCT	2 cut(s)	87, 128
Eco24I	GRGCYC	2 cut(s)	1257, 1296
Eco31I	GGTCTC	1 cut(s)	1221
Eco47I	GGWCC	1 cut(s)	358
Eco53kI	GAGCTC	1 cut(s)	1255
Eco88I	CYCGRG	2 cut(s)	81, 1256
EcoICRI	GAGCTC	1 cut(s)	1255
EcoNI	CCTNNNNNAGG	1 cut(s)	92
EcoRI	GAATTC	1 cut(s)	1568
EcoRII	CCWGG	2 cut(s)	596, 1408
EcoT38I	GRGCYC	2 cut(s)	1257, 1296
FaqI	GGGAC	1 cut(s)	1400
FauI	CCCGC	2 cut(s)	182, 557
FbaI	TGATCA	1 cut(s)	213
Fnu4HI	GCNGC	9 cut(s)	270, 336, 477, 671, 711, 1120, 1203, 1227, 1562
FokI	GGATG	6 cut(s)	38, 217, 281, 500, 1001, 1378
FriOI	GRGCYC	2 cut(s)	1257, 1296
Fsp4HI	GCNGC	9 cut(s)	270, 336, 477, 671, 711, 1120, 1203, 1227, 1562
FspBI	CTAG	1 cut(s)	1362
FspI	TGCGCA	1 cut(s)	439
GlaI	GCGC	3 cut(s)	278, 439, 714
GluI	GCNGC	9 cut(s)	270, 336, 477, 671, 711, 1120, 1203, 1227, 1562
HaeIII	GGCC	8 cut(s)	87, 128, 239, 314, 330, 710, 1056, 1536
HapII	CCGG	6 cut(s)	516, 615, 661, 840, 1039, 1146
HgaI	GACGC	1 cut(s)	653
HhaI	GCGC	3 cut(s)	279, 440, 715
Hin1I	GRCGYC	1 cut(s)	645
Hin6I	GCGC	3 cut(s)	277, 438, 713
HinP1I	GCGC	3 cut(s)	277, 438, 713
HincII	GTYRAC	1 cut(s)	631
HindII	GTYRAC	1 cut(s)	631
HindIII	AAGCTT	1 cut(s)	1508
HinfI	GANTC	4 cut(s)	105, 117, 760, 1449
HpaII	CCGG	6 cut(s)	516, 615, 661, 840, 1039, 1146
HphI	GGTGA	4 cut(s)	22, 37, 163, 545
Hpy166II	GTNNAC	4 cut(s)	250, 361, 631, 1111
Hpy188I	TCNGA	5 cut(s)	235, 451, 777, 1092, 1477
Hpy188III	TCNNGA	6 cut(s)	114, 148, 499, 661, 791, 1157
Hpy8I	GTNNAC	4 cut(s)	250, 361, 631, 1111
Hpy99I	CGWCG	3 cut(s)	320, 473, 647
HpyAV	CCTTC	1 cut(s)	869
HpyCH4III	ACNGT	2 cut(s)	465, 892
HpyCH4IV	ACGT	2 cut(s)	396, 537
HpyCH4V	TGCA	6 cut(s)	670, 931, 989, 1111, 1122, 1457
HpyF3I	CTNAG	2 cut(s)	624, 1370
HpySE526I	ACGT	2 cut(s)	396, 537
Hsp92I	GRCGYC	1 cut(s)	645
HspAI	GCGC	3 cut(s)	277, 438, 713
Kpn2I	TCCGGA	1 cut(s)	660
KpnI	GGTACC	1 cut(s)	80
Ksp22I	TGATCA	1 cut(s)	213
Kzo9I	GATC	3 cut(s)	213, 510, 1129
LmnI	GCTCC	3 cut(s)	473, 1261, 1558
Lsp1109I	GCAGC	5 cut(s)	463, 682, 1106, 1213, 1548
LweI	GCATC	6 cut(s)	442, 449, 1173, 1285, 1356, 1395
MaeI	CTAG	1 cut(s)	1362
MaeII	ACGT	2 cut(s)	396, 537
MaeIII	GTNAC	2 cut(s)	406, 533
MalI	GATC	3 cut(s)	215, 512, 1131
MboI	GATC	3 cut(s)	213, 510, 1129
MboII	GAAGA	6 cut(s)	160, 649, 1145, 1211, 1411, 1414
MhlI	GDGCHC	6 cut(s)	309, 730, 742, 1113, 1257, 1296
MluCI	AATT	6 cut(s)	258, 984, 1104, 1309, 1526, 1568
MlyI	GAGTC	1 cut(s)	99
MroI	TCCGGA	1 cut(s)	660
MroXI	GAANNNNTTC	1 cut(s)	1312
MseI	TTAA	3 cut(s)	807, 1068, 1283
MslI	CAYNNNNRTG	4 cut(s)	182, 422, 1245, 1427
MspI	CCGG	6 cut(s)	516, 615, 661, 840, 1039, 1146
MspR9I	CCNGG	3 cut(s)	598, 1039, 1410
Mva1269I	GAATGC	2 cut(s)	177, 672
MvaI	CCWGG	2 cut(s)	598, 1410
MvnI	CGCG	1 cut(s)	713
NciI	CCSGG	1 cut(s)	1039
NdeII	GATC	3 cut(s)	213, 510, 1129
NlaIV	GGNNCC	3 cut(s)	78, 186, 739
NmeAIII	GCCGAG	1 cut(s)	306
NmuCI	GTSAC	2 cut(s)	406, 533
NsbI	TGCGCA	1 cut(s)	439
NspI	RCATGY	4 cut(s)	427, 829, 961, 1268
NspV	TTCGAA	1 cut(s)	561
PaeI	GCATGC	1 cut(s)	1268
PceI	AGGCCT	2 cut(s)	87, 128
PciI	ACATGT	3 cut(s)	423, 825, 957
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PctI	GAATGC	2 cut(s)	177, 672
PdmI	GAANNNNTTC	1 cut(s)	1312
PfeI	GAWTC	3 cut(s)	117, 760, 1449
PfoI	TCCNGGA	1 cut(s)	596
PkrI	GCNGC	9 cut(s)	271, 337, 478, 672, 712, 1121, 1204, 1228, 1563
PleI	GAGTC	1 cut(s)	99
PpsI	GAGTC	1 cut(s)	99
PscI	ACATGT	3 cut(s)	423, 825, 957
PshBI	ATTAAT	1 cut(s)	1283
PsiI	TTATAA	1 cut(s)	896
Psp124BI	GAGCTC	1 cut(s)	1257
Psp6I	CCWGG	2 cut(s)	596, 1408
PspGI	CCWGG	2 cut(s)	596, 1408
PspN4I	GGNNCC	3 cut(s)	78, 186, 739
PspPI	GGNCC	2 cut(s)	358, 1054
PsrI	GAACNNNNNNTAC	2 cut(s)	143, 175
RsaI	GTAC	4 cut(s)	78, 830, 877, 1505
RsaNI	GTAC	4 cut(s)	77, 829, 876, 1504
RseI	CAYNNNNRTG	4 cut(s)	182, 422, 1245, 1427
SacI	GAGCTC	1 cut(s)	1257
SaqAI	TTAA	3 cut(s)	807, 1068, 1283
SatI	GCNGC	9 cut(s)	270, 336, 477, 671, 711, 1120, 1203, 1227, 1562
Sau3AI	GATC	3 cut(s)	213, 510, 1129
Sau96I	GGNCC	2 cut(s)	358, 1054
SchI	GAGTC	1 cut(s)	99
ScrFI	CCNGG	3 cut(s)	598, 1039, 1410
SduI	GDGCHC	6 cut(s)	309, 730, 742, 1113, 1257, 1296
SfaNI	GCATC	6 cut(s)	442, 449, 1173, 1285, 1356, 1395
SfcI	CTRYAG	1 cut(s)	37
SfuI	TTCGAA	1 cut(s)	561
SinI	GGWCC	1 cut(s)	358
SmiMI	CAYNNNNRTG	4 cut(s)	182, 422, 1245, 1427
SmlI	CTYRAG	1 cut(s)	308
SmoI	CTYRAG	1 cut(s)	308
SphI	GCATGC	1 cut(s)	1268
Sse9I	AATT	6 cut(s)	258, 984, 1104, 1309, 1526, 1568
SseBI	AGGCCT	2 cut(s)	87, 128
SsiI	CCGC	8 cut(s)	175, 270, 336, 550, 634, 711, 1202, 1541
SspMI	CTAG	1 cut(s)	1362
SstI	GAGCTC	1 cut(s)	1257
StuI	AGGCCT	2 cut(s)	87, 128
StyD4I	CCNGG	3 cut(s)	596, 1037, 1408
TaaI	ACNGT	2 cut(s)	465, 892
TaiI	ACGT	2 cut(s)	399, 540
TaqI	TCGA	6 cut(s)	123, 149, 468, 561, 1082, 1572
TasI	AATT	6 cut(s)	258, 984, 1104, 1309, 1526, 1568
TatI	WGTACW	1 cut(s)	1503
TauI	GCSGC	4 cut(s)	272, 338, 713, 1205
TfiI	GAWTC	3 cut(s)	117, 760, 1449
Tru1I	TTAA	3 cut(s)	807, 1068, 1283
Tru9I	TTAA	3 cut(s)	807, 1068, 1283
TscAI	CASTG	3 cut(s)	368, 385, 415
TseFI	GTSAC	2 cut(s)	406, 533
TseI	GCWGC	5 cut(s)	476, 670, 1119, 1226, 1561
Tsp45I	GTSAC	2 cut(s)	406, 533
TspDTI	ATGAA	9 cut(s)	17, 109, 752, 997, 1229, 1411, 1433, 1441, 1509
TspGWI	ACGGA	2 cut(s)	154, 486
TspRI	CASTG	3 cut(s)	368, 385, 415
VneI	GTGCAC	1 cut(s)	1109
VpaK11BI	GGWCC	1 cut(s)	358
VspI	ATTAAT	1 cut(s)	1283
XagI	CCTNNNNNAGG	1 cut(s)	92
XapI	RAATTY	2 cut(s)	258, 1568
XceI	RCATGY	4 cut(s)	427, 829, 961, 1268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	62
XmnI	GAANNNNTTC	1 cut(s)	1312
XspI	CTAG	1 cut(s)	1362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.