Rorug06G0172300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0007020
Physical Location & Seq
Reverse (-)
25464682 .. 25472319
7638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0172300.1

Sequence Viewer

Length: 2013 bp
ATGGCTTCCATCTCTGCTCCAACCCCAGCTCCTCCCAGCCTTACCTTTCCCAACCCCAAATCCTACCCCTCCTCCGCTTCGAAAACCCCATTGTACCCTTCCTCTTCCTCTAGATTTTCCCTCTGCCGGTGCCGGAACCCTTCCTCCTCCGACGACTCAGTCCAGTGGAGATGGGACTCTGCGCTCCAGGACCTCGTCAAAAACGCCATGAAACGACTCGATTTCCAAGGAGGCGCTACTGCTAGCAAGGCCGACGAGGAGGAGCCTGACTGGGATTGGGATCGCTGGCGTCAGCATTTCCTCGAGGTCGAAGACCAAGAGCGCCTCGTCTCACTTCTCAAGTCACAGTTGGGTCGAGCTGTAAATGTAGAGGATTTTGAGGATGCTGCTAGGCTCAAGGTTGGCATTGCTGCCGCCTCCACAAACGACGTCGTCGGCTCAGTCATTTCTCGTCTCAATAGAGCTATACAGGACGAGCGTTACCAGGAAGCAGCATTTTTCCGGGATAATGCCAGTGCTGGATTGGTGGGTTGGTGGGCTGGCATCTCTAAGGATAAGAAGGACCCTCACGGCCTAATTATACGAGTGACTGCAGAGCATGGACGATATGTCGCAAGGAGTTATAGTCCCCGGCAGCTTGCTACAGCTGCAGCTGGTGTTCCACTGTTTGAGATCTTTTTAACAGTGAATAAAAAGGGTGAATACAAACAACAGGCTGTGTACTTAAAGCGGGGAGGAGTATTTCCAGATTCTCCACAAGTTAGCTCCAAAGCAATGGACACCACTACCACCTTGAATCCTTTAGATTCAACTGAAGAAAAAAGCGATCTATTTCTTGGAGGTAGTGACGATACTGAAGATGGTGATGATATGGATGATGATTTGGATCTTTCTGAGGGACTCTCTGGATTTCAGAGCATCTTGAGGGATATGATTCCTAATGTGAAGGTCAAGGTTTTGAAAGTGACGTCACCTGGAAAGGTAGATCGGGATCTAATATCTAAAGTGATTGAGCAGATCATTGAGGAAGATGATGAAGATAAGGATAATGAAATCGAGAATTCAGAAGCTGAAGATGAGGACGAGGACGAGGACGAAGACGAAGAAAAGGTTGAAGGTGATCAAGAGACAGATGTGATTGAACTGGATGCTGATCCTGCAATTATACAAAATGCTGAGAGACAAGAAATTGCAGTTAAAGTTGTTTTTGGTGGTCTTGGGCAGAAAATATCTAACATCCCACCTAGTAAAAATTTGCTCCGAGTCCCTGCTAAAATAGAGAAGAAGGGGCGTTTATCCTTTTCTTTTACTGTTGAGAAAGATATTAATCAACAGGATTCTCGTGACAAGGAACAAAGTTCGGGAGATAAAAAAGCTAAAGTTGGAGGTCAACGTAGCATTGACAATGTGATGTTTGATCTTGCTAAGTTCATTGGAAAAGAGAAGATACCATTGAAGGTACTCAAAGATGTTGGTGAGTTGATAAATCTCGCTCTCAGTCAGGTTCATAATCATCAGCCATTGTCAGGATCCACTACTTTCAATCGCATTGAAATGCCCGTGTCTCAAGATCCATTAAATGGACTATACATTGGTGCACATGGGCTCTACACCTCAGAAGTTATTCACCTGAGACGTAAGTTTGGCCAATGGAAAGAAGACAATGGGACTAAGGAACCCTCAAACCTCGAGTTTTATGAATATGTGGAAGCCTTAAAACTTACTGGGGATCCTTATGTACCAGCTGGCCAGGTGGCATTCCGTGCAAAGATTGGGAAAAGATATCAGCTTCCTCATAAAGGGATCATACCAGAAGAGTTTGGAGTGGTTGCTCGATATAAAGGACAGGGGAGGCTTGCTGAGCCAGGGTTTCGTAATCCTCGATGGGTCGATGGTGAACTTGTTATTCTTGATGGAAAGTACATTAAAGGAGGACCTGTTGTTGGGTTTGTTTATTGGGCCCCAGAGTATCATTTCTTGGTGTTCTTTAATCGACTGAGGCTTCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

670

Amino Acids

74.76

Weight (kDa)

5.02

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cyclin_D1_bind PF12014 514 - 667 3.7e-30 Cyclin D1 binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
AatII GACGTC 2 cut(s) 432, 971
AbsI CCTCGAGG 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 129
AccB7I CCANNNNNTGG 1 cut(s) 1580
AciI CCGC 3 cut(s) 75, 414, 730
AcoI YGGCCR 2 cut(s) 1645, 1747
AcsI RAATTY 2 cut(s) 1060, 1252
AcuI CTGAAG 3 cut(s) 834, 876, 1092
AcyI GRCGYC 3 cut(s) 289, 429, 968
AfaI GTAC 5 cut(s) 95, 722, 1461, 1740, 1922
AfiI CCNNNNNNNGG 5 cut(s) 126, 1526, 1580, 1799, 1943
AgsI TTSAA 9 cut(s) 796, 810, 961, 1115, 1142, 1456, 1543, 1553, 2006
AhdI GACNNNNNGTC 1 cut(s) 608
AjnI CCWGG 5 cut(s) 186, 483, 973, 1749, 1864
AloI GAACNNNNNNTCC 2 cut(s) 128, 160
Alw21I GWGCWC 1 cut(s) 1600
Alw26I GTCTC 6 cut(s) 334, 458, 1121, 1174, 1569, 1627
Alw44I GTGCAC 1 cut(s) 1596
AlwNI CAGNNNCTG 1 cut(s) 1070
Ama87I CYCGRG 2 cut(s) 302, 1688
AoxI GGCC 5 cut(s) 249, 571, 1645, 1747, 1959
ApaI GGGCCC 1 cut(s) 1963
ApaLI GTGCAC 1 cut(s) 1596
ApeKI GCWGC 6 cut(s) 386, 410, 491, 634, 647, 650
ApoI RAATTY 2 cut(s) 1060, 1252
AseI ATTAAT 1 cut(s) 1326
Asp700I GAANNNNTTC 1 cut(s) 1623
AspLEI GCGC 3 cut(s) 184, 236, 324
AspS9I GGNCC 5 cut(s) 190, 562, 1934, 1959, 1960
AsuC2I CCSGG 2 cut(s) 503, 631
AsuHPI GGTGA 7 cut(s) 710, 875, 963, 1130, 1487, 1619, 1907
AsuII TTCGAA 1 cut(s) 80
AsuNHI GCTAGC 1 cut(s) 242
AvaI CYCGRG 2 cut(s) 302, 1688
AvaII GGWCC 3 cut(s) 190, 562, 1934
BaeGI GKGCMC 2 cut(s) 1600, 1963
BalI TGGCCA 2 cut(s) 1647, 1749
BamHI GGATCC 2 cut(s) 1529, 1729
BanI GGYRCC 1 cut(s) 129
BanII GRGCYC 2 cut(s) 1608, 1963
BauI CACGAG 1 cut(s) 1341
BbsI GAAGAC 3 cut(s) 318, 1104, 1665
Bbv12I GWGCWC 1 cut(s) 1600
BbvI GCAGC 6 cut(s) 373, 397, 503, 634, 646, 662
BccI CCATC 6 cut(s) 17, 165, 854, 1878, 1886, 1907
BceAI ACGGC 1 cut(s) 586
BciT130I CCWGG 5 cut(s) 188, 485, 975, 1751, 1866
BclI TGATCA 1 cut(s) 1120
BcnI CCSGG 2 cut(s) 503, 631
BcoDI GTCTC 6 cut(s) 334, 458, 1121, 1174, 1569, 1627
BfaI CTAG 5 cut(s) 111, 243, 390, 1245, 2011
BfmI CTRYAG 3 cut(s) 591, 642, 648
BfoI RGCGCY 2 cut(s) 237, 325
BglII AGATCT 1 cut(s) 672
BisI GCNGC 7 cut(s) 387, 411, 414, 492, 635, 648, 651
BlpI GCTNAGC 1 cut(s) 1860
BlsI GCNGC 7 cut(s) 388, 412, 415, 493, 636, 649, 652
Bme1390I CCNGG 7 cut(s) 188, 485, 503, 631, 975, 1751, 1866
Bme18I GGWCC 3 cut(s) 190, 562, 1934
BmeRI GACNNNNNGTC 1 cut(s) 608
BmeT110I CYCGRG 2 cut(s) 302, 1688
BmgT120I GGNCC 5 cut(s) 190, 562, 1934, 1959, 1960
BmiI GGNNCC 9 cut(s) 131, 137, 264, 564, 1531, 1677, 1731, 1961, 1962
BmrFI CCNGG 7 cut(s) 188, 485, 503, 631, 975, 1751, 1866
BmrI ACTGGG 2 cut(s) 280, 1734
BmsI GCATC 4 cut(s) 373, 552, 927, 1138
BmtI GCTAGC 1 cut(s) 246
BmuI ACTGGG 2 cut(s) 280, 1734
BpiI GAAGAC 3 cut(s) 318, 1104, 1665
BplI GAGNNNNNCTC 2 cut(s) 887, 919
BpmI CTGGAG 1 cut(s) 170
Bpu1102I GCTNAGC 1 cut(s) 1860
Bpu14I TTCGAA 1 cut(s) 80
BpuEI CTTGAG 4 cut(s) 323, 380, 943, 1551
BpuMI CCSGG 2 cut(s) 503, 631
BsaBI GATNNNNATC 5 cut(s) 279, 885, 990, 1152, 1326
BsaHI GRCGYC 3 cut(s) 289, 429, 968
BsaJI CCNNGG 3 cut(s) 226, 629, 1865
Bsc4I CCNNNNNNNGG 5 cut(s) 126, 1526, 1580, 1799, 1943
Bse118I RCCGGY 1 cut(s) 126
Bse1I ACTGG 5 cut(s) 163, 275, 513, 1149, 1729
Bse3DI GCAATG 2 cut(s) 405, 780
Bse8I GATNNNNATC 5 cut(s) 279, 885, 990, 1152, 1326
BseBI CCWGG 5 cut(s) 188, 485, 975, 1751, 1866
BseDI CCNNGG 3 cut(s) 226, 629, 1865
BseGI GGATG 4 cut(s) 388, 880, 1153, 1236
BseJI GATNNNNATC 5 cut(s) 279, 885, 990, 1152, 1326
BseLI CCNNNNNNNGG 5 cut(s) 126, 1526, 1580, 1799, 1943
BseMI GCAATG 2 cut(s) 405, 780
BseMII CTCAG 9 cut(s) 171, 453, 885, 1167, 1510, 1622, 1629, 1851, 1988
BseNI ACTGG 5 cut(s) 163, 275, 513, 1149, 1729
BseRI GAGGAG 6 cut(s) 21, 61, 136, 272, 275, 750
BseSI GKGCMC 2 cut(s) 1600, 1963
BseXI GCAGC 6 cut(s) 373, 397, 503, 634, 646, 662
BseYI CCCAGC 2 cut(s) 25, 35
BshFI GGCC 5 cut(s) 251, 573, 1647, 1749, 1961
BshNI GGYRCC 1 cut(s) 129
BsiHKAI GWGCWC 1 cut(s) 1600
BsiHKCI CYCGRG 2 cut(s) 302, 1688
BsiSI CCGG 4 cut(s) 127, 133, 502, 631
BslFI GGGAC 5 cut(s) 188, 612, 912, 1250, 1681
BslI CCNNNNNNNGG 5 cut(s) 126, 1526, 1580, 1799, 1943
BsmAI GTCTC 6 cut(s) 334, 458, 1121, 1174, 1569, 1627
BsmBI CGTCTC 3 cut(s) 334, 458, 1627
BsmFI GGGAC 5 cut(s) 188, 612, 912, 1250, 1681
BsmI GAATGC 1 cut(s) 1757
BsnI GGCC 5 cut(s) 251, 573, 1647, 1749, 1961
BsoBI CYCGRG 2 cut(s) 302, 1688
Bsp119I TTCGAA 1 cut(s) 80
Bsp120I GGGCCC 1 cut(s) 1959
Bsp1286I GDGCHC 3 cut(s) 1600, 1608, 1963
Bsp1720I GCTNAGC 1 cut(s) 1860
BspACI CCGC 3 cut(s) 75, 414, 730
BspANI GGCC 5 cut(s) 251, 573, 1647, 1749, 1961
BspCNI CTCAG 9 cut(s) 170, 452, 886, 1168, 1509, 1623, 1628, 1852, 1989
BspLI GGNNCC 9 cut(s) 131, 137, 264, 564, 1531, 1677, 1731, 1961, 1962
BspMAI CTGCAG 2 cut(s) 595, 652
BspOI GCTAGC 1 cut(s) 246
BspT104I TTCGAA 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 129
BsrDI GCAATG 2 cut(s) 405, 780
BsrFI RCCGGY 1 cut(s) 126
BsrI ACTGG 5 cut(s) 163, 275, 513, 1149, 1729
BssAI RCCGGY 1 cut(s) 126
BssECI CCNNGG 3 cut(s) 226, 629, 1865
BssNI GRCGYC 3 cut(s) 289, 429, 968
BssSI CACGAG 1 cut(s) 1341
BssT1I CCWWGG 1 cut(s) 226
Bst2BI CACGAG 1 cut(s) 1341
Bst2UI CCWGG 5 cut(s) 188, 485, 975, 1751, 1866
Bst4CI ACNGT 4 cut(s) 348, 666, 685, 1312
Bst6I CTCTTC 2 cut(s) 109, 1809
BstACI GRCGYC 3 cut(s) 289, 429, 968
BstAPI GCANNNNNTGC 1 cut(s) 1763
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 6 cut(s) 244, 287, 541, 639, 1747, 1857
BstENI CCTNNNNNAGG 1 cut(s) 1797
BstF5I GGATG 4 cut(s) 388, 880, 1153, 1236
BstH2I RGCGCY 2 cut(s) 237, 325
BstHHI GCGC 3 cut(s) 184, 236, 324
BstMAI GTCTC 6 cut(s) 334, 458, 1121, 1174, 1569, 1627
BstMWI GCNNNNNNNGC 5 cut(s) 248, 647, 1157, 1763, 1861
BstNI CCWGG 5 cut(s) 188, 485, 975, 1751, 1866
BstSCI CCNGG 7 cut(s) 186, 483, 501, 629, 973, 1749, 1864
BstSFI CTRYAG 3 cut(s) 591, 642, 648
BstSLI GKGCMC 2 cut(s) 1600, 1963
BstV1I GCAGC 6 cut(s) 373, 397, 503, 634, 646, 662
BstV2I GAAGAC 3 cut(s) 318, 1104, 1665
BstX2I RGATCY 6 cut(s) 672, 886, 991, 1529, 1570, 1729
BstXI CCANNNNNNTGG 1 cut(s) 775
BstYI RGATCY 6 cut(s) 672, 886, 991, 1529, 1570, 1729
BsuRI GGCC 5 cut(s) 251, 573, 1647, 1749, 1961
BtsCI GGATG 4 cut(s) 388, 880, 1153, 1236
BtsIMutI CAGTG 4 cut(s) 170, 520, 662, 690
Cac8I GCNNGC 6 cut(s) 244, 287, 541, 639, 1747, 1857
CaiI CAGNNNCTG 1 cut(s) 1070
CfoI GCGC 3 cut(s) 184, 236, 324
Cfr10I RCCGGY 1 cut(s) 126
Cfr13I GGNCC 5 cut(s) 190, 562, 1934, 1959, 1960
CseI GACGC 1 cut(s) 278
Csp6I GTAC 5 cut(s) 94, 721, 1460, 1739, 1921
CviAII CATG 3 cut(s) 208, 599, 1601
CviQI GTAC 5 cut(s) 94, 721, 1460, 1739, 1921
DrdI GACNNNNNNGTC 1 cut(s) 158
DriI GACNNNNNGTC 1 cut(s) 608
DseDI GACNNNNNNGTC 1 cut(s) 158
EaeI YGGCCR 2 cut(s) 1645, 1747
Eam1104I CTCTTC 2 cut(s) 109, 1809
Eam1105I GACNNNNNGTC 1 cut(s) 608
EarI CTCTTC 2 cut(s) 109, 1809
Eco130I CCWWGG 1 cut(s) 226
Eco24I GRGCYC 2 cut(s) 1608, 1963
Eco32I GATATC 1 cut(s) 1784
Eco47I GGWCC 3 cut(s) 190, 562, 1934
Eco57I CTGAAG 3 cut(s) 834, 876, 1092
Eco88I CYCGRG 2 cut(s) 302, 1688
EcoNI CCTNNNNNAGG 1 cut(s) 1797
EcoO109I RGGNCCY 4 cut(s) 190, 562, 1934, 1960
EcoRI GAATTC 1 cut(s) 1060
EcoRII CCWGG 5 cut(s) 186, 483, 973, 1749, 1864
EcoRV GATATC 1 cut(s) 1784
EcoT14I CCWWGG 1 cut(s) 226
EcoT38I GRGCYC 2 cut(s) 1608, 1963
ErhI CCWWGG 1 cut(s) 226
Esp3I CGTCTC 3 cut(s) 334, 458, 1627
FaeI CATG 3 cut(s) 211, 602, 1604
FaqI GGGAC 5 cut(s) 188, 612, 912, 1250, 1681
FatI CATG 3 cut(s) 207, 598, 1600
FauI CCCGC 1 cut(s) 723
FbaI TGATCA 1 cut(s) 1120
Fnu4HI GCNGC 7 cut(s) 387, 411, 414, 492, 635, 648, 651
FokI GGATG 4 cut(s) 395, 887, 1160, 1223
FriOI GRGCYC 2 cut(s) 1608, 1963
Fsp4HI GCNGC 7 cut(s) 387, 411, 414, 492, 635, 648, 651
FspBI CTAG 5 cut(s) 111, 243, 390, 1245, 2011
GlaI GCGC 3 cut(s) 183, 235, 323
GluI GCNGC 7 cut(s) 387, 411, 414, 492, 635, 648, 651
GsaI CCCAGC 2 cut(s) 29, 39
GsuI CTGGAG 1 cut(s) 170
HaeII RGCGCY 2 cut(s) 237, 325
HaeIII GGCC 5 cut(s) 251, 573, 1647, 1749, 1961
HapII CCGG 4 cut(s) 127, 133, 502, 631
HgaI GACGC 1 cut(s) 278
HhaI GCGC 3 cut(s) 184, 236, 324
Hin1I GRCGYC 3 cut(s) 289, 429, 968
Hin1II CATG 3 cut(s) 211, 602, 1604
Hin6I GCGC 3 cut(s) 182, 234, 322
HinP1I GCGC 3 cut(s) 182, 234, 322
HincII GTYRAC 1 cut(s) 1391
HindII GTYRAC 1 cut(s) 1391
HpaII CCGG 4 cut(s) 127, 133, 502, 631
HphI GGTGA 7 cut(s) 710, 875, 963, 1130, 1487, 1619, 1907
Hpy166II GTNNAC 4 cut(s) 721, 1391, 1598, 1898
Hpy188I TCNGA 6 cut(s) 151, 895, 915, 1066, 1262, 1618
Hpy8I GTNNAC 4 cut(s) 721, 1391, 1598, 1898
Hpy99I CGWCG 5 cut(s) 155, 257, 431, 434, 437
HpyAV CCTTC 7 cut(s) 108, 150, 553, 940, 1109, 1279, 1450
HpyCH4III ACNGT 4 cut(s) 348, 666, 685, 1312
HpyCH4IV ACGT 4 cut(s) 429, 968, 1393, 1636
HpyCH4V TGCA 6 cut(s) 593, 650, 1160, 1193, 1598, 1766
HpyF10VI GCNNNNNNNGC 5 cut(s) 248, 647, 1157, 1763, 1861
HpySE526I ACGT 4 cut(s) 429, 968, 1393, 1636
Hsp92I GRCGYC 3 cut(s) 289, 429, 968
Hsp92II CATG 3 cut(s) 211, 602, 1604
HspAI GCGC 3 cut(s) 182, 234, 322
Ksp22I TGATCA 1 cut(s) 1120
LmnI GCTCC 6 cut(s) 22, 34, 189, 262, 770, 1263
Lsp1109I GCAGC 6 cut(s) 373, 397, 503, 634, 646, 662
LweI GCATC 4 cut(s) 373, 552, 927, 1138
MaeI CTAG 5 cut(s) 111, 243, 390, 1245, 2011
MaeII ACGT 4 cut(s) 429, 968, 1393, 1636
MaeIII GTNAC 7 cut(s) 342, 479, 586, 845, 964, 969, 1343
MflI RGATCY 6 cut(s) 672, 886, 991, 1529, 1570, 1729
MhlI GDGCHC 3 cut(s) 1600, 1608, 1963
MlsI TGGCCA 2 cut(s) 1647, 1749
MluCI AATT 5 cut(s) 576, 1060, 1161, 1188, 1252
MluNI TGGCCA 2 cut(s) 1647, 1749
MlyI GAGTC 5 cut(s) 149, 170, 210, 894, 1272
MmeI TCCRAC 3 cut(s) 44, 174, 1363
Mox20I TGGCCA 2 cut(s) 1647, 1749
MroXI GAANNNNTTC 1 cut(s) 1623
MscI TGGCCA 2 cut(s) 1647, 1749
MseI TTAA 8 cut(s) 680, 725, 1197, 1326, 1577, 1715, 1926, 1989
MslI CAYNNNNRTG 1 cut(s) 1553
Msp20I TGGCCA 2 cut(s) 1647, 1749
MspA1I CMGCKG 3 cut(s) 647, 653, 1745
MspI CCGG 4 cut(s) 127, 133, 502, 631
MspR9I CCNGG 7 cut(s) 188, 485, 503, 631, 975, 1751, 1866
Mva1269I GAATGC 1 cut(s) 1757
MvaI CCWGG 5 cut(s) 188, 485, 975, 1751, 1866
MwoI GCNNNNNNNGC 5 cut(s) 248, 647, 1157, 1763, 1861
NciI CCSGG 2 cut(s) 503, 631
NheI GCTAGC 1 cut(s) 242
NlaIII CATG 3 cut(s) 211, 602, 1604
NlaIV GGNNCC 9 cut(s) 131, 137, 264, 564, 1531, 1677, 1731, 1961, 1962
NmuCI GTSAC 6 cut(s) 342, 586, 845, 964, 969, 1343
NspV TTCGAA 1 cut(s) 80
PaeR7I CTCGAG 2 cut(s) 302, 1688
PcsI WCGNNNNNNNCGW 1 cut(s) 1879
PctI GAATGC 1 cut(s) 1757
PdmI GAANNNNTTC 1 cut(s) 1623
PfeI GAWTC 5 cut(s) 749, 796, 806, 934, 1337
PflFI GACNNNGTC 3 cut(s) 158, 194, 431
PflMI CCANNNNNTGG 1 cut(s) 1580
PfoI TCCNGGA 2 cut(s) 186, 501
PkrI GCNGC 7 cut(s) 388, 412, 415, 493, 636, 649, 652
PleI GAGTC 5 cut(s) 149, 170, 210, 894, 1271
PpsI GAGTC 5 cut(s) 149, 170, 210, 894, 1271
PpuMI RGGWCCY 3 cut(s) 190, 562, 1934
PshBI ATTAAT 1 cut(s) 1326
Psp5II RGGWCCY 3 cut(s) 190, 562, 1934
Psp6I CCWGG 5 cut(s) 186, 483, 973, 1749, 1864
PspFI CCCAGC 2 cut(s) 25, 35
PspGI CCWGG 5 cut(s) 186, 483, 973, 1749, 1864
PspN4I GGNNCC 9 cut(s) 131, 137, 264, 564, 1531, 1677, 1731, 1961, 1962
PspOMI GGGCCC 1 cut(s) 1959
PspPI GGNCC 5 cut(s) 190, 562, 1934, 1959, 1960
PspPPI RGGWCCY 3 cut(s) 190, 562, 1934
PspXI VCTCGAGB 2 cut(s) 302, 1688
PstI CTGCAG 2 cut(s) 595, 652
PstNI CAGNNNCTG 1 cut(s) 1070
PsuI RGATCY 6 cut(s) 672, 886, 991, 1529, 1570, 1729
PsyI GACNNNGTC 3 cut(s) 158, 194, 431
PvuII CAGCTG 3 cut(s) 647, 653, 1745
RsaI GTAC 5 cut(s) 95, 722, 1461, 1740, 1922
RsaNI GTAC 5 cut(s) 94, 721, 1460, 1739, 1921
RseI CAYNNNNRTG 1 cut(s) 1553
SaqAI TTAA 8 cut(s) 680, 725, 1197, 1326, 1577, 1715, 1926, 1989
SatI GCNGC 7 cut(s) 387, 411, 414, 492, 635, 648, 651
Sau96I GGNCC 5 cut(s) 190, 562, 1934, 1959, 1960
SchI GAGTC 5 cut(s) 149, 170, 210, 894, 1272
ScrFI CCNGG 7 cut(s) 188, 485, 503, 631, 975, 1751, 1866
SduI GDGCHC 3 cut(s) 1600, 1608, 1963
SfaNI GCATC 4 cut(s) 373, 552, 927, 1138
SfcI CTRYAG 3 cut(s) 591, 642, 648
Sfr274I CTCGAG 2 cut(s) 302, 1688
SfuI TTCGAA 1 cut(s) 80
SinI GGWCC 3 cut(s) 190, 562, 1934
SlaI CTCGAG 2 cut(s) 302, 1688
SmiMI CAYNNNNRTG 1 cut(s) 1553
SmlI CTYRAG 6 cut(s) 302, 338, 395, 922, 1566, 1688
SmoI CTYRAG 6 cut(s) 302, 338, 395, 922, 1566, 1688
Sse9I AATT 5 cut(s) 576, 1060, 1161, 1188, 1252
SsiI CCGC 3 cut(s) 75, 414, 730
SspMI CTAG 5 cut(s) 111, 243, 390, 1245, 2011
StyD4I CCNGG 7 cut(s) 186, 483, 501, 629, 973, 1749, 1864
StyI CCWWGG 1 cut(s) 226
TaaI ACNGT 4 cut(s) 348, 666, 685, 1312
TaiI ACGT 4 cut(s) 432, 971, 1396, 1639
TasI AATT 5 cut(s) 576, 1060, 1161, 1188, 1252
TatI WGTACW 2 cut(s) 720, 1920
TauI GCSGC 1 cut(s) 416
TfiI GAWTC 5 cut(s) 749, 796, 806, 934, 1337
Tru1I TTAA 8 cut(s) 680, 725, 1197, 1326, 1577, 1715, 1926, 1989
Tru9I TTAA 8 cut(s) 680, 725, 1197, 1326, 1577, 1715, 1926, 1989
TscAI CASTG 4 cut(s) 170, 520, 669, 690
TseFI GTSAC 6 cut(s) 342, 586, 845, 964, 969, 1343
TseI GCWGC 6 cut(s) 386, 410, 491, 634, 647, 650
Tsp45I GTSAC 6 cut(s) 342, 586, 845, 964, 969, 1343
TspDTI ATGAA 6 cut(s) 224, 1050, 1065, 1420, 1496, 1713
TspGWI ACGGA 1 cut(s) 1751
TspRI CASTG 4 cut(s) 170, 520, 669, 690
Tth111I GACNNNGTC 3 cut(s) 158, 194, 431
Van91I CCANNNNNTGG 1 cut(s) 1580
VneI GTGCAC 1 cut(s) 1596
VpaK11BI GGWCC 3 cut(s) 190, 562, 1934
VspI ATTAAT 1 cut(s) 1326
XagI CCTNNNNNAGG 1 cut(s) 1797
XapI RAATTY 2 cut(s) 1060, 1252
XbaI TCTAGA 1 cut(s) 110
XcmI CCANNNNNNNNNTGG 1 cut(s) 520
XhoI CTCGAG 2 cut(s) 302, 1688
XmnI GAANNNNTTC 1 cut(s) 1623
XspI CTAG 5 cut(s) 111, 243, 390, 1245, 2011
ZraI GACGTC 2 cut(s) 430, 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.