Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005170

Physical Location & Seq

Genomic Coordinates Reverse (-)

31911548 .. 31914143

Gene Structure 2596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0198200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGAAACCTATTTTCATTCCTCTTAACCTTTCCAGCTTGTTTTTACTCATCGTCACCCTGCTGGTGGCCGGAAAGTCTGCACCTATCTACTCTCCATCAGATGATATCAGCCTTAACTGCGGCTTTTCCGGCGACACTGTCAGTAATTATGATTTTCAAACTTGGACGGGAGACATCAACTCAAAGTTTTTCCCCGAAGAAGCTGGTAGCACATCCCAAGTCGCAAAAGCACCACCGTCGTCCTCCACCGGCAGCCAAGTACCGTACACCACAGCTCGGCTTTCACACTCGGAATTCACTTACAGATTTCCCGTCAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCCCGGCTACATACAACGCGGACTTCGACCGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACACACTTCTCAAGGACTTCAACGCTTCTCTCGGTAGTATTTACGATGGATCTGAGACACTACTCAGAGAATTCTGCCTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACATTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTACTCGGCAGCCCAAGGCGATGGGGCTAGTTATCTCGGCAACAGCGGTAGCAGATATTACGTTGAAAACAACACCGCTCTGGAGATGATCTTCCGAATCAACGTTGGTGGCAGCCCAGTATCTCCGAATGAAGACACCGGCATGTACCGCACCTGGGATCCAATCGACGAGTTCTACTTGGATGATCTAAGTAGAAATTTGAGCGTTGCACGAAGATATAATACTCCTCTCAATTTTGCAAGAATCCCTAACTACACTGCGCCCGAAGAGGTGTACCGAACAGGCCGGACAATGGGAGGGAACAGCACCATCAACAAGAGCTACAATCTCACCTGGGGATTCCCTGTATATCCCGACTTTTCTTACCTGGTGAGGCTCCATTTCTGTGAGATTGACCCGAATATTTCCATGGATAGGGATAGAGTGTTTCAGATATTCATAGCCAATTTTACAGCTGAACCGCACGCGGACATAATCAGATGGACTACAGAAAATGGAATCGGAAATGGGATTCCCATATATAGGGACTACTTTGTGCCGATGCTGAATCTTGGAACCCAGAAGAAAGGTTCTGTTAATCTCTTTGTTGCACTACAAGCATATCAAGACGATAGCCAAACTCGATATAACGATGCAATCTTGAATGGGCTGGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGACCCATCCCCGAGCTACCGAATATCCCGCCAAAGGTGACGTCGGAAAGCTCTAGAAACTCGAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGGTGTAGTTTCGGCCTTACTTGTTCTTTCCTTCCTCGGGTCACCTTATCCATCTTATTTGTGCCGTGACTTTTCACTGGCAGAGATCAAAGGCGCCACCAAAAACTTCGATGACACTTTAATCATTGGAGTTGGTGGGTTTGGCCATGTCTACAAAGGATACTTCGACAATGGGGCCACCCTTGTGGCAATCAAACGGCTGAAAGCCACTTCATCACAGGGCGCCCACGAGTTCATGACGGAAATCAAAATGCTCTCCCGATTGCGCCACCACCATTTGGTTTCTCTTATAGGATTTTGTGCCGATCAAGGTGAGATGATCTTAGTCTACGATTACATGGCACATGGGACCCTCAGTGATCATTTGCACCGGACCAAGGAACCACATCTTCCTTGGAAACTACGGCTTCACATTTGTATTGGTGCAGCACAAGGTTTGCACTACCTTCACACAAGTACCGAAGGCACCATCATTCACCGTGACGTAAAGAGCGCAAACATATTATTAGACGAGAAATGGGTAGCGAAGGTTTCAGATTTTGGGTTGTCAAAAAAGGGCATTATCACAATATCCAAGACCCACATTAGCACGGAGGTGAAGGGTAGTTTTGGATATCTTGACATCGATTACAACCGACGTCAACAACTGACTGAGAAGTCTGACGTGTATTCATTCGGCGTTGTGTTATGCGAGGTATTGTGTGGGAGGCCAGCTGTGACCATTGTAGATAATAATAGAGTTGGGCTAGCTGGATGGGTCAAGAAGTGTCATCATGAAGGGAAACTTGATCAAGTTGTTGACCCAAATTTGAAGGGTGAAATTGCATTGCGATGCTTGCATAAATTTGTTTCCATCGCAATCAGTTGCATGGATGATAATGGGATCAATCGGCCGTCAATGGAGAATGTTGTGAGAGGGCTTCAATTTGCATTTGAAATGCAACAGAACAACGAGAATTATATTGATCACATTGAAAGGAAGGTTCAAGATGAGATTGGATTGATCAAGGACAATGAAGGGTCTAGTTCTAGTGAGCGAAGCAGTGGGGCGAAAGAATCCATCCAAAGGTTGACCGGGACAATCTTCTCCGAGATCATCGATCCAGTTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

836

Amino Acids

93.11

Weight (kDa)

6.21

Isoelectric Point (pI)

36.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 423	1.2e-27	Malectin-like domain
Pkinase	PF00069	506 - 769	5.7e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	507 - 771	7.3e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005170)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03211 FvH4_2g21890
malus_domestica	MD05G1014100.v1.1
prunus_persica	Prupe.8G226600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0392041 RchiOBHm_Chr6g0288791
rosa_laevigata	RLG00000009843 RLG00000012366 RLG00000012368 RLG00000012372 RLG00000012377 RLG00000012378 RLG00000012380
rosa_multiflora	Rmu_co8406507.1_g000001 Rmu_sc0004928.1_g000001 Rmu_sc0005091.1_g000008 Rmu_sc0005314.1_g000026
rosa_roxburghii	Rroxscaffold_7G00179880 Rroxscaffold_7G00179900
rosa_rugosa	Rorug04G0006500 Rorug06G0198100 Rorug06G0198200 Rorug06G0198300
rosa_samantha	Rh4CG043100 Rh6AG045200 Rh6BG315200 Rh6BG315400 Rh6CG322900 Rh6DG308600
rosa_wichuraiana	Rw6G026750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2050
AatII	GACGTC	2 cut(s)	1340, 2035
AccB1I	GGYRCC	3 cut(s)	1487, 1616, 1859
AccB7I	CCANNNNNTGG	1 cut(s)	1672
AccBSI	CCGCTC	2 cut(s)	381, 683
AccI	GTMKAC	3 cut(s)	1370, 1545, 1722
AccII	CGCG	2 cut(s)	368, 1073
AclI	AACGTT	1 cut(s)	708
AclWI	GGATC	6 cut(s)	472, 578, 758, 771, 2285, 2489
AcoI	YGGCCR	3 cut(s)	66, 1537, 2285
AcsI	RAATTY	5 cut(s)	293, 485, 802, 2200, 2237
AcyI	GRCGYC	4 cut(s)	1337, 1488, 1617, 2032
AfaI	GTAC	5 cut(s)	261, 266, 752, 881, 1852
AflIII	ACRYGT	1 cut(s)	2058
AjiI	CACGTC	1 cut(s)	2059
AjnI	CCWGG	5 cut(s)	319, 543, 758, 938, 972
AleI	CACNNNNGTG	2 cut(s)	1577, 1988
AluBI	AGCT	9 cut(s)	36, 203, 275, 927, 1061, 1312, 1347, 2108, 2144
AluI	AGCT	9 cut(s)	36, 203, 275, 927, 1061, 1312, 1347, 2108, 2144
Alw26I	GTCTC	2 cut(s)	165, 464
AlwI	GGATC	6 cut(s)	472, 578, 758, 771, 2285, 2489
Ama87I	CYCGRG	2 cut(s)	1307, 1430
AoxI	GGCC	8 cut(s)	66, 322, 889, 1407, 1537, 1569, 2102, 2285
ApeKI	GCWGC	4 cut(s)	252, 614, 717, 1820
ApoI	RAATTY	5 cut(s)	293, 485, 802, 2200, 2237
ArsI	GACNNNNNNTTYG	4 cut(s)	1322, 1352, 1354, 1384
AspLEI	GCGC	5 cut(s)	868, 1490, 1619, 1662, 1889
AspS9I	GGNCC	4 cut(s)	1298, 1569, 1743, 1767
AsuC2I	CCSGG	2 cut(s)	353, 2470
AsuHPI	GGTGA	9 cut(s)	46, 928, 988, 1345, 1428, 1718, 1862, 2002, 2222
AsuNHI	GCTAGC	1 cut(s)	2140
AvaI	CYCGRG	2 cut(s)	1307, 1430
AvaII	GGWCC	3 cut(s)	1298, 1743, 1767
BaeI	ACNNNNGTAYC	2 cut(s)	1834, 1867
BalI	TGGCCA	1 cut(s)	1539
BamHI	GGATCC	1 cut(s)	763
BanI	GGYRCC	3 cut(s)	1487, 1616, 1859
BarI	GAAGNNNNNNTAC	2 cut(s)	811, 843
BauI	CACGAG	1 cut(s)	1622
BbsI	GAAGAC	1 cut(s)	744
BbvI	GCAGC	4 cut(s)	264, 626, 729, 1832
BceAI	ACGGC	5 cut(s)	1300, 1443, 1607, 1814, 2272
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1360, 1394
BciT130I	CCWGG	5 cut(s)	321, 545, 760, 940, 974
BciVI	GTATCC	2 cut(s)	545, 1547
BclI	TGATCA	4 cut(s)	1753, 2182, 2359, 2397
BcnI	CCSGG	2 cut(s)	353, 2470
BcoDI	GTCTC	2 cut(s)	165, 464
BfaI	CTAG	5 cut(s)	633, 1350, 2141, 2418, 2424
BfmI	CTRYAG	1 cut(s)	1092
BfoI	RGCGCY	2 cut(s)	1491, 1620
BfuI	GTATCC	2 cut(s)	545, 1547
BisI	GCNGC	5 cut(s)	121, 253, 615, 718, 1821
BlsI	GCNGC	5 cut(s)	122, 254, 616, 719, 1822
Bme1390I	CCNGG	7 cut(s)	321, 353, 545, 760, 940, 974, 2470
Bme18I	GGWCC	3 cut(s)	1298, 1743, 1767
BmeT110I	CYCGRG	2 cut(s)	1307, 1430
BmgBI	CACGTC	1 cut(s)	2059
BmgT120I	GGNCC	4 cut(s)	1298, 1569, 1743, 1767
BmrFI	CCNGG	7 cut(s)	321, 353, 545, 760, 940, 974, 2470
BmrI	ACTGGG	1 cut(s)	716
BmsI	GCATC	3 cut(s)	1137, 1228, 2216
BmtI	GCTAGC	1 cut(s)	2144
BmuI	ACTGGG	1 cut(s)	716
BpiI	GAAGAC	1 cut(s)	744
BpmI	CTGGAG	1 cut(s)	707
BpuEI	CTTGAG	1 cut(s)	410
BpuMI	CCSGG	2 cut(s)	353, 2470
Bsa29I	ATCGAT	2 cut(s)	2019, 2493
BsaBI	GATNNNNATC	1 cut(s)	575
BsaHI	GRCGYC	4 cut(s)	1337, 1488, 1617, 2032
BsaJI	CCNNGG	8 cut(s)	544, 619, 759, 939, 1014, 1429, 1770, 1787
BsaWI	WCCGGW	1 cut(s)	1764
BsaXI	ACNNNNNCTCC	2 cut(s)	520, 550
Bse118I	RCCGGY	4 cut(s)	248, 407, 743, 1394
Bse1I	ACTGG	3 cut(s)	722, 1476, 2498
Bse3DI	GCAATG	1 cut(s)	2219
Bse8I	GATNNNNATC	1 cut(s)	575
BseBI	CCWGG	5 cut(s)	321, 545, 760, 940, 974
BseCI	ATCGAT	2 cut(s)	2019, 2493
BseDI	CCNNGG	8 cut(s)	544, 619, 759, 939, 1014, 1429, 1770, 1787
BseGI	GGATG	7 cut(s)	212, 333, 793, 1302, 2153, 2272, 2454
BseJI	GATNNNNATC	1 cut(s)	575
BseMI	GCAATG	1 cut(s)	2219
BseMII	CTCAG	4 cut(s)	459, 493, 1762, 2037
BseNI	ACTGG	3 cut(s)	722, 1476, 2498
BseRI	GAGGAG	1 cut(s)	822
BseX3I	CGGCCG	1 cut(s)	2285
BseXI	GCAGC	4 cut(s)	264, 626, 729, 1832
BseYI	CCCAGC	1 cut(s)	539
BsgI	GTGCAG	2 cut(s)	63, 1839
Bsh1236I	CGCG	2 cut(s)	368, 1073
Bsh1285I	CGRYCG	2 cut(s)	379, 2288
BshFI	GGCC	8 cut(s)	68, 324, 891, 1409, 1539, 1571, 2104, 2287
BshNI	GGYRCC	3 cut(s)	1487, 1616, 1859
BshVI	ATCGAT	2 cut(s)	2019, 2493
BsiEI	CGRYCG	2 cut(s)	379, 2288
BsiHKCI	CYCGRG	2 cut(s)	1307, 1430
BslFI	GGGAC	3 cut(s)	1145, 1756, 2485
BsmAI	GTCTC	2 cut(s)	165, 464
BsmFI	GGGAC	3 cut(s)	1145, 1756, 2485
BsnI	GGCC	8 cut(s)	68, 324, 891, 1409, 1539, 1571, 2104, 2287
BsoBI	CYCGRG	2 cut(s)	1307, 1430
Bsp19I	CCATGG	1 cut(s)	1014
BspANI	GGCC	8 cut(s)	68, 324, 891, 1409, 1539, 1571, 2104, 2287
BspCNI	CTCAG	4 cut(s)	460, 492, 1761, 2038
BspDI	ATCGAT	2 cut(s)	2019, 2493
BspFNI	CGCG	2 cut(s)	368, 1073
BspHI	TCATGA	2 cut(s)	1629, 2167
BspOI	GCTAGC	1 cut(s)	2144
BspPI	GGATC	6 cut(s)	472, 578, 758, 771, 2285, 2489
BspT107I	GGYRCC	3 cut(s)	1487, 1616, 1859
BsrBI	CCGCTC	2 cut(s)	381, 683
BsrDI	GCAATG	1 cut(s)	2219
BsrFI	RCCGGY	4 cut(s)	248, 407, 743, 1394
BsrI	ACTGG	3 cut(s)	722, 1476, 2498
BssAI	RCCGGY	4 cut(s)	248, 407, 743, 1394
BssECI	CCNNGG	8 cut(s)	544, 619, 759, 939, 1014, 1429, 1770, 1787
BssNI	GRCGYC	4 cut(s)	1337, 1488, 1617, 2032
BssSI	CACGAG	1 cut(s)	1622
BssT1I	CCWWGG	4 cut(s)	619, 1014, 1770, 1787
Bst2BI	CACGAG	1 cut(s)	1622
Bst2UI	CCWGG	5 cut(s)	321, 545, 760, 940, 974
Bst4CI	ACNGT	4 cut(s)	139, 237, 264, 1874
Bst6I	CTCTTC	1 cut(s)	867
BstACI	GRCGYC	4 cut(s)	1337, 1488, 1617, 2032
BstC8I	GCNNGC	5 cut(s)	1071, 1383, 2106, 2142, 2231
BstDEI	CTNAG	6 cut(s)	468, 479, 794, 1717, 1748, 2046
BstDSI	CCRYGG	1 cut(s)	1014
BstEII	GGTNACC	1 cut(s)	1434
BstF5I	GGATG	7 cut(s)	212, 333, 793, 1302, 2153, 2272, 2454
BstFNI	CGCG	2 cut(s)	368, 1073
BstH2I	RGCGCY	2 cut(s)	1491, 1620
BstHHI	GCGC	5 cut(s)	868, 1490, 1619, 1662, 1889
BstMAI	GTCTC	2 cut(s)	165, 464
BstMCI	CGRYCG	2 cut(s)	379, 2288
BstMWI	GCNNNNNNNGC	8 cut(s)	117, 129, 511, 753, 1202, 1293, 1391, 2230
BstNI	CCWGG	5 cut(s)	321, 545, 760, 940, 974
BstNSI	RCATGY	1 cut(s)	751
BstPI	GGTNACC	1 cut(s)	1434
BstSCI	CCNGG	7 cut(s)	319, 351, 543, 758, 938, 972, 2468
BstSFI	CTRYAG	1 cut(s)	1092
BstUI	CGCG	2 cut(s)	368, 1073
BstV1I	GCAGC	4 cut(s)	264, 626, 729, 1832
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	2 cut(s)	464, 763
BstXI	CCANNNNNNTGG	2 cut(s)	626, 1579
BstYI	RGATCY	2 cut(s)	464, 763
BstZI	CGGCCG	1 cut(s)	2285
Bsu15I	ATCGAT	2 cut(s)	2019, 2493
BsuI	GTATCC	2 cut(s)	545, 1547
BsuRI	GGCC	8 cut(s)	68, 324, 891, 1409, 1539, 1571, 2104, 2287
BsuTUI	ATCGAT	2 cut(s)	2019, 2493
BtgI	CCRYGG	1 cut(s)	1014
BtgZI	GCGATG	3 cut(s)	639, 2233, 2239
BtrI	CACGTC	1 cut(s)	2059
BtsCI	GGATG	7 cut(s)	212, 333, 793, 1302, 2153, 2272, 2454
BtsI	GCAGTG	2 cut(s)	861, 2443
BtsIMutI	CAGTG	5 cut(s)	135, 861, 1469, 1756, 2443
Cac8I	GCNNGC	5 cut(s)	1071, 1383, 2106, 2142, 2231
CciI	TCATGA	2 cut(s)	1629, 2167
CfoI	GCGC	5 cut(s)	868, 1490, 1619, 1662, 1889
Cfr10I	RCCGGY	4 cut(s)	248, 407, 743, 1394
Cfr13I	GGNCC	4 cut(s)	1298, 1569, 1743, 1767
ClaI	ATCGAT	2 cut(s)	2019, 2493
CsiI	ACCWGGT	1 cut(s)	972
Csp6I	GTAC	5 cut(s)	260, 265, 751, 880, 1851
CspCI	CAANNNNNGTGG	4 cut(s)	391, 426, 694, 729
CviQI	GTAC	5 cut(s)	260, 265, 751, 880, 1851
DdeI	CTNAG	6 cut(s)	468, 479, 794, 1717, 1748, 2046
DinI	GGCGCC	2 cut(s)	1489, 1618
DrdI	GACNNNNNNGTC	1 cut(s)	2050
DseDI	GACNNNNNNGTC	1 cut(s)	2050
EaeI	YGGCCR	3 cut(s)	66, 1537, 2285
EagI	CGGCCG	1 cut(s)	2285
Eam1104I	CTCTTC	1 cut(s)	867
EarI	CTCTTC	1 cut(s)	867
EciI	GGCGGA	1 cut(s)	1311
EclXI	CGGCCG	1 cut(s)	2285
Eco130I	CCWWGG	4 cut(s)	619, 1014, 1770, 1787
Eco32I	GATATC	2 cut(s)	106, 2009
Eco47I	GGWCC	3 cut(s)	1298, 1743, 1767
Eco52I	CGGCCG	1 cut(s)	2285
Eco88I	CYCGRG	2 cut(s)	1307, 1430
Eco91I	GGTNACC	1 cut(s)	1434
EcoO109I	RGGNCCY	1 cut(s)	1743
EcoO65I	GGTNACC	1 cut(s)	1434
EcoRI	GAATTC	2 cut(s)	293, 485
EcoRII	CCWGG	5 cut(s)	319, 543, 758, 938, 972
EcoRV	GATATC	2 cut(s)	106, 2009
EcoT14I	CCWWGG	4 cut(s)	619, 1014, 1770, 1787
EgeI	GGCGCC	2 cut(s)	1489, 1618
EheI	GGCGCC	2 cut(s)	1489, 1618
ErhI	CCWWGG	4 cut(s)	619, 1014, 1770, 1787
FalI	AAGNNNNNCTT	2 cut(s)	2163, 2195
FaqI	GGGAC	3 cut(s)	1145, 1756, 2485
FauI	CCCGC	1 cut(s)	1332
FbaI	TGATCA	4 cut(s)	1753, 2182, 2359, 2397
FblI	GTMKAC	3 cut(s)	1370, 1545, 1722
Fnu4HI	GCNGC	5 cut(s)	121, 253, 615, 718, 1821
FokI	GGATG	7 cut(s)	199, 320, 800, 1289, 2160, 2279, 2441
Fsp4HI	GCNGC	5 cut(s)	121, 253, 615, 718, 1821
FspBI	CTAG	5 cut(s)	633, 1350, 2141, 2418, 2424
GlaI	GCGC	5 cut(s)	867, 1489, 1618, 1661, 1888
GluI	GCNGC	5 cut(s)	121, 253, 615, 718, 1821
GsaI	CCCAGC	1 cut(s)	543
GsuI	CTGGAG	1 cut(s)	707
HaeII	RGCGCY	2 cut(s)	1491, 1620
HaeIII	GGCC	8 cut(s)	68, 324, 891, 1409, 1539, 1571, 2104, 2287
HhaI	GCGC	5 cut(s)	868, 1490, 1619, 1662, 1889
Hin1I	GRCGYC	4 cut(s)	1337, 1488, 1617, 2032
Hin6I	GCGC	5 cut(s)	866, 1488, 1617, 1660, 1887
HinP1I	GCGC	5 cut(s)	866, 1488, 1617, 1660, 1887
HincII	GTYRAC	4 cut(s)	1371, 2036, 2194, 2466
HindII	GTYRAC	4 cut(s)	1371, 2036, 2194, 2466
HinfI	GANTC	9 cut(s)	517, 702, 849, 945, 1104, 1117, 1153, 1372, 2450
HphI	GGTGA	9 cut(s)	46, 928, 988, 1345, 1428, 1718, 1862, 2002, 2222
Hpy166II	GTNNAC	8 cut(s)	267, 880, 1371, 1546, 1723, 2036, 2194, 2466
Hpy8I	GTNNAC	8 cut(s)	267, 880, 1371, 1546, 1723, 2036, 2194, 2466
Hpy99I	CGWCG	4 cut(s)	241, 776, 1342, 2034
HpyAV	CCTTC	9 cut(s)	1435, 1850, 1850, 1915, 1987, 2165, 2200, 2368, 2405
HpyCH4III	ACNGT	4 cut(s)	139, 237, 264, 1874
HpyCH4IV	ACGT	6 cut(s)	666, 708, 1337, 1878, 2032, 2058
HpyF10VI	GCNNNNNNNGC	8 cut(s)	117, 129, 511, 753, 1202, 1293, 1391, 2230
HpyF3I	CTNAG	6 cut(s)	468, 479, 794, 1717, 1748, 2046
HpySE526I	ACGT	6 cut(s)	666, 708, 1337, 1878, 2032, 2058
Hsp92I	GRCGYC	4 cut(s)	1337, 1488, 1617, 2032
HspAI	GCGC	5 cut(s)	866, 1488, 1617, 1660, 1887
KasI	GGCGCC	2 cut(s)	1487, 1616
KflI	GGGWCCC	1 cut(s)	1743
Ksp22I	TGATCA	4 cut(s)	1753, 2182, 2359, 2397
LmnI	GCTCC	1 cut(s)	987
Lsp1109I	GCAGC	4 cut(s)	264, 626, 729, 1832
LweI	GCATC	3 cut(s)	1137, 1228, 2216
MabI	ACCWGGT	1 cut(s)	972
MaeI	CTAG	5 cut(s)	633, 1350, 2141, 2418, 2424
MaeII	ACGT	6 cut(s)	666, 708, 1337, 1878, 2032, 2058
MaeIII	GTNAC	6 cut(s)	52, 1333, 1434, 1460, 1874, 2110
MbiI	CCGCTC	2 cut(s)	381, 683
MflI	RGATCY	2 cut(s)	464, 763
MlsI	TGGCCA	1 cut(s)	1539
MluNI	TGGCCA	1 cut(s)	1539
Mly113I	GGCGCC	2 cut(s)	1488, 1617
MlyI	GAGTC	2 cut(s)	526, 1366
MmeI	TCCRAC	1 cut(s)	1320
Mox20I	TGGCCA	1 cut(s)	1539
MscI	TGGCCA	1 cut(s)	1539
MseI	TTAA	5 cut(s)	24, 114, 564, 1182, 1514
MslI	CAYNNNNRTG	6 cut(s)	584, 746, 990, 1577, 1988, 2224
Msp20I	TGGCCA	1 cut(s)	1539
MspA1I	CMGCKG	4 cut(s)	514, 651, 1061, 2108
MspR9I	CCNGG	7 cut(s)	321, 353, 545, 760, 940, 974, 2470
MvaI	CCWGG	5 cut(s)	321, 545, 760, 940, 974
MvnI	CGCG	2 cut(s)	368, 1073
MwoI	GCNNNNNNNGC	8 cut(s)	117, 129, 511, 753, 1202, 1293, 1391, 2230
NarI	GGCGCC	2 cut(s)	1488, 1617
NciI	CCSGG	2 cut(s)	353, 2470
NcoI	CCATGG	1 cut(s)	1014
NheI	GCTAGC	1 cut(s)	2140
NmeAIII	GCCGAG	4 cut(s)	256, 590, 621, 1272
NmuCI	GTSAC	6 cut(s)	52, 1333, 1434, 1460, 1874, 2110
NspI	RCATGY	1 cut(s)	751
OliI	CACNNNNGTG	2 cut(s)	1577, 1988
PagI	TCATGA	2 cut(s)	1629, 2167
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PfeI	GAWTC	7 cut(s)	702, 849, 945, 1104, 1117, 1153, 2450
PflFI	GACNNNGTC	1 cut(s)	137
PflMI	CCANNNNNTGG	1 cut(s)	1672
PkrI	GCNGC	5 cut(s)	122, 254, 616, 719, 1822
PleI	GAGTC	2 cut(s)	525, 1366
PluTI	GGCGCC	2 cut(s)	1491, 1620
PpsI	GAGTC	2 cut(s)	525, 1366
PpuMI	RGGWCCY	1 cut(s)	1743
Psp1406I	AACGTT	1 cut(s)	708
Psp5II	RGGWCCY	1 cut(s)	1743
Psp6I	CCWGG	5 cut(s)	319, 543, 758, 938, 972
PspEI	GGTNACC	1 cut(s)	1434
PspFI	CCCAGC	1 cut(s)	539
PspGI	CCWGG	5 cut(s)	319, 543, 758, 938, 972
PspPI	GGNCC	4 cut(s)	1298, 1569, 1743, 1767
PspPPI	RGGWCCY	1 cut(s)	1743
PsuI	RGATCY	2 cut(s)	464, 763
PsyI	GACNNNGTC	1 cut(s)	137
PvuII	CAGCTG	2 cut(s)	1061, 2108
RsaI	GTAC	5 cut(s)	261, 266, 752, 881, 1852
RsaNI	GTAC	5 cut(s)	260, 265, 751, 880, 1851
RseI	CAYNNNNRTG	6 cut(s)	584, 746, 990, 1577, 1988, 2224
SalI	GTCGAC	1 cut(s)	1369
SaqAI	TTAA	5 cut(s)	24, 114, 564, 1182, 1514
SatI	GCNGC	5 cut(s)	121, 253, 615, 718, 1821
Sau96I	GGNCC	4 cut(s)	1298, 1569, 1743, 1767
SchI	GAGTC	2 cut(s)	526, 1366
ScrFI	CCNGG	7 cut(s)	321, 353, 545, 760, 940, 974, 2470
SexAI	ACCWGGT	1 cut(s)	972
SfaNI	GCATC	3 cut(s)	1137, 1228, 2216
SfcI	CTRYAG	1 cut(s)	1092
SfoI	GGCGCC	2 cut(s)	1489, 1618
SgrAI	CRCCGGYG	1 cut(s)	1394
SinI	GGWCC	3 cut(s)	1298, 1743, 1767
SmiMI	CAYNNNNRTG	6 cut(s)	584, 746, 990, 1577, 1988, 2224
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
SspDI	GGCGCC	2 cut(s)	1487, 1616
SspI	AATATT	1 cut(s)	1009
SspMI	CTAG	5 cut(s)	633, 1350, 2141, 2418, 2424
StyD4I	CCNGG	7 cut(s)	319, 351, 543, 758, 938, 972, 2468
StyI	CCWWGG	4 cut(s)	619, 1014, 1770, 1787
TaaI	ACNGT	4 cut(s)	139, 237, 264, 1874
TaiI	ACGT	6 cut(s)	669, 711, 1340, 1881, 2035, 2061
TauI	GCSGC	1 cut(s)	123
TfiI	GAWTC	7 cut(s)	702, 849, 945, 1104, 1117, 1153, 2450
Tru1I	TTAA	5 cut(s)	24, 114, 564, 1182, 1514
Tru9I	TTAA	5 cut(s)	24, 114, 564, 1182, 1514
TscAI	CASTG	5 cut(s)	142, 868, 1476, 1756, 2443
TseFI	GTSAC	6 cut(s)	52, 1333, 1434, 1460, 1874, 2110
TseI	GCWGC	4 cut(s)	252, 614, 717, 1820
Tsp45I	GTSAC	6 cut(s)	52, 1333, 1434, 1460, 1874, 2110
TspGWI	ACGGA	2 cut(s)	1649, 2000
TspRI	CASTG	5 cut(s)	142, 868, 1476, 1756, 2443
Tth111I	GACNNNGTC	1 cut(s)	137
Van91I	CCANNNNNTGG	1 cut(s)	1672
VpaK11BI	GGWCC	3 cut(s)	1298, 1743, 1767
XapI	RAATTY	5 cut(s)	293, 485, 802, 2200, 2237
XbaI	TCTAGA	1 cut(s)	1349
XceI	RCATGY	1 cut(s)	751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1785
XmiI	GTMKAC	3 cut(s)	1370, 1545, 1722
XspI	CTAG	5 cut(s)	633, 1350, 2141, 2418, 2424
ZraI	GACGTC	2 cut(s)	1338, 2033

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.