Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006082

Physical Location & Seq

Genomic Coordinates Reverse (-)

50250428 .. 50255839

Gene Structure 5412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0354700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGCGAACAAGCTCAAAGTAGAACAACTCCGAGACCAATTGGCCCAGCGTGGTCTCAGCACCGCCGGAACCAAGCCCGTCCTGGTTTCGAGGCTCGAGTCCGCTCTTCACAGCCAAACCGCAGCCTCAACCGACGGCTCAGCCACTAAAAAGAGAGGAAGGAACTCCAATGAAGATGAGGATTCAACGGCGTCCAAGAAAATCAAGGCAACTGAGAAACTCCGGAATATGAATATCAAGCAACTCCGCGAGGAAGCAACTCTTCGCGGAATTCCGGCTACTGGTTCCAAGAAGGAGGTGCTGGAGAGGCTCTGTCAAGATTCCGATAAGGATTGCATTGACATTGATGCGAGTAGAGGAGTGAAGGAAGAAGGGAATGGCAGCAAGGAGAAGATGGTTACAGCTACCAAAAAAGGTGCGGCTGTGTTGGATCAGTGGCTACCGGATAATATAAAGACACATTATCATGTTTTGCAACTGGGTGATGATGTGTATGATGCCATGTTGAACCAGACCAATGTTGGCCATAACAATAACAAGTTCTATCTACTTCAAGTTCTTGAATCTGATGTTGGTGGTAGTTTCATGGTTTACTATAGATGGGGGAGAGTAGGTGTCAAGGGTCAAAACAAGTTACTAGGCCCTTACACATTCCGAGACAGGGCAATTCAGGAATTTGAAAAGAAATTCTCTGAAAAAACCAGGAATTATTGGTCCGAACGAAAAACATTCCAGTCATTCCCAAAGTGCTATGTGTGGTTAGAAATGGATTACAGCGAAAAGGAAGGCCAATCAGCTGTTGCAGAAAAGAATCGCTCAGCTTTAGTACCTCAACCTTTGGAAACAAAACTTGATCCCCGTATCGCAAAGCTCGTATCTCTTATCTGCAACATTGCCATGATGAAGCAGTATATGATGGAAATAGGATACAATGCTGATAAATTGCCACTGGGGAAGCTGAGCAAATCAACAATTCTAAAGGGTTACAGTATACTGAAGAGTATTGCTGATGTGATTGGCCAGTCTAATAAGAAAACGCTTGAACAATTAAGTGGAGAGTTCTACACTGTCATTCCTCATGATTTTGGATTTAAAAAGATGAGCAACTTTGTGATTGATACTCCTCAGAAGTTGAAGCAAAAGTTGGAAATGGTTGAAGCACTAGGTGAAATTGAAGTTGCAACAAAATTGTTGAATGATGATAACGGGACACAGGAAGATCCCTTGTATTCTAATTACCAGAGCCTCCGCTGTGAGCTGACACCGCTTGGTGCCGATTCAGATGAATTTGATATGGTTTCAAAGTATTTGCATAACACCCATGCAAAAACGCATTCAAATTATACCGTTGATATCGTTCAGATATTCCGTGCATCAAGAGAGGGTGAAGCTGAACGTTATAGAAAGTTTTTTAGTATGAAAAATAGAATGCTTCTATGGCATGGTTCTCGTCTCACAAATTGGGCTGGCATTTTATCTCAAGGTTTGCGCATAGCTCCACCTGAAGCTCCCGTAACTGGTTACATGTTTGGGAAAGGGATTTACTTTGCCGACATGTTCTCCAAAAGTGCAAATTATTGCTATGCTAACAATTCTTCTACAGCTGGTGTGCTTCTGCTGTGTGAGGTTGCACTGGGTGACATGGCTGAGCTTTTAACTGCCAAATATGATGCTGACAACTTACCAGAAGGGAAGCTAAGCACAAAGGGAGTTGGTGGAACTGAACCAGATCTTTCCGAAGCTCAGTTAATAGAGGATGGTGTTACGGTTCCCTTAGGAAAGCCAAAAGAAAATCCGCGCAAGGGTGCTTTACTGTACAATGAGTACATAGTTTACAATGTCGACCAGATTCGGATGCGCTATGTTGTTCAAGTGAATTTCAATTTCAAGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

631

Amino Acids

71.04

Weight (kDa)

8.75

Isoelectric Point (pI)

34.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAP	PF02037	2 - 36	1.5e-11	SAP domain
WGR	PF05406	165 - 244	2.6e-23	WGR domain
PARP_reg	PF02877	283 - 413	4.8e-42	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	427 - 627	9.9e-80	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26520
fragaria_vesca	FvH4_2g06840 FvH4_2g35030
prunus_persica	Prupe.1G441900_v2.0.a1 Prupe.8G116500_v2.0.a1
pyrus_communis	pycom08g08950 pycom10g07300
rosa_chinensis	RchiOBHm_Chr6g0259071 RchiOBHm_Chr6g0306971
rosa_laevigata	RLG00000010750 RLG00000014559
rosa_multiflora	Rmu_sc0007920.1_g000037 Rmu_ssc0000050.1_g000102
rosa_roxburghii	Rroxscaffold_7G00161310 Rroxscaffold_7G00206300 Rroxscaffold_7G00206460
rosa_rugosa	Rorug05G0585200 Rorug06G0354700
rosa_samantha	Rh6AG101600 Rh6AG466500 Rh6BG434500 Rh6CG091000 Rh6CG481500 Rh6DG085000 Rh6DG467800
rosa_wichuraiana	Rw6G008830 Rw6G040640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1490
AccB1I	GGYRCC	1 cut(s)	1271
AccBSI	CCGCTC	1 cut(s)	104
AccI	GTMKAC	2 cut(s)	991, 1842
AccII	CGCG	3 cut(s)	249, 267, 1798
AccIII	TCCGGA	1 cut(s)	222
AciI	CCGC	9 cut(s)	63, 102, 120, 247, 267, 419, 1249, 1265, 1796
AclI	AACGTT	1 cut(s)	1396
AclWI	GGATC	3 cut(s)	438, 848, 1214
AcoI	YGGCCR	2 cut(s)	523, 1018
AcsI	RAATTY	5 cut(s)	270, 674, 686, 1286, 1876
AcuI	CTGAAG	2 cut(s)	1016, 1524
AcyI	GRCGYC	1 cut(s)	191
AdeI	CACNNNGTG	2 cut(s)	1166, 1637
AfaI	GTAC	3 cut(s)	828, 1817, 1826
AfiI	CCNNNNNNNGG	4 cut(s)	281, 661, 1517, 1802
AflIII	ACRYGT	2 cut(s)	1524, 1554
AjnI	CCWGG	2 cut(s)	81, 701
AjuI	GAANNNNNNNTTGG	4 cut(s)	555, 587, 1127, 1159
Alw26I	GTCTC	4 cut(s)	27, 59, 651, 1457
AlwI	GGATC	3 cut(s)	438, 848, 1214
Ama87I	CYCGRG	1 cut(s)	95
Aor13HI	TCCGGA	1 cut(s)	222
AoxI	GGCC	5 cut(s)	42, 523, 640, 787, 1018
ApeKI	GCWGC	2 cut(s)	122, 381
ApoI	RAATTY	5 cut(s)	270, 674, 686, 1286, 1876
AspLEI	GCGC	3 cut(s)	1491, 1800, 1860
AspS9I	GGNCC	3 cut(s)	43, 641, 714
AsuHPI	GGTGA	4 cut(s)	494, 1178, 1397, 1649
AvaI	CYCGRG	1 cut(s)	95
AvaII	GGWCC	1 cut(s)	714
AxyI	CCTNAGG	1 cut(s)	1774
BalI	TGGCCA	2 cut(s)	525, 1020
BanI	GGYRCC	1 cut(s)	1271
BbvI	GCAGC	2 cut(s)	134, 393
BccI	CCATC	4 cut(s)	388, 594, 910, 1751
BceAI	ACGGC	2 cut(s)	151, 204
BcgI	CGANNNNNNTGC	2 cut(s)	1430, 1464
BciT130I	CCWGG	2 cut(s)	83, 703
BciVI	GTATCC	1 cut(s)	920
BcoDI	GTCTC	4 cut(s)	27, 59, 651, 1457
BfaI	CTAG	2 cut(s)	638, 1163
BfmI	CTRYAG	2 cut(s)	595, 1599
BfuI	GTATCC	1 cut(s)	920
BglII	AGATCT	1 cut(s)	1729
BisI	GCNGC	3 cut(s)	123, 382, 420
BlpI	GCTNAGC	5 cut(s)	139, 817, 959, 1647, 1697
BlsI	GCNGC	3 cut(s)	124, 383, 421
Bme1390I	CCNGG	2 cut(s)	83, 703
Bme18I	GGWCC	1 cut(s)	714
BmeT110I	CYCGRG	1 cut(s)	95
BmgT120I	GGNCC	3 cut(s)	43, 641, 714
BmiI	GGNNCC	4 cut(s)	70, 286, 1273, 1770
BmrFI	CCNGG	2 cut(s)	83, 703
BmrI	ACTGGG	3 cut(s)	488, 959, 1643
BmsI	GCATC	5 cut(s)	337, 487, 1382, 1660, 1845
BmuI	ACTGGG	3 cut(s)	488, 959, 1643
BpmI	CTGGAG	1 cut(s)	323
Bpu1102I	GCTNAGC	5 cut(s)	139, 817, 959, 1647, 1697
BpuEI	CTTGAG	1 cut(s)	1464
BsaHI	GRCGYC	1 cut(s)	191
BsaI	GGTCTC	2 cut(s)	27, 59
BsaWI	WCCGGW	2 cut(s)	222, 442
BsaXI	ACNNNNNCTCC	4 cut(s)	598, 628, 1544, 1574
Bsc4I	CCNNNNNNNGG	4 cut(s)	281, 661, 1517, 1802
Bse1I	ACTGG	7 cut(s)	286, 483, 733, 954, 1021, 1522, 1638
Bse21I	CCTNAGG	1 cut(s)	1774
Bse3DI	GCAATG	1 cut(s)	891
BseAI	TCCGGA	1 cut(s)	222
BseBI	CCWGG	2 cut(s)	83, 703
BseGI	GGATG	2 cut(s)	1762, 1860
BseLI	CCNNNNNNNGG	4 cut(s)	281, 661, 1517, 1802
BseMI	GCAATG	1 cut(s)	891
BseMII	CTCAG	8 cut(s)	70, 153, 204, 831, 950, 1139, 1638, 1757
BseNI	ACTGG	7 cut(s)	286, 483, 733, 954, 1021, 1522, 1638
BseRI	GAGGAG	2 cut(s)	372, 1113
BseXI	GCAGC	2 cut(s)	134, 393
BseYI	CCCAGC	1 cut(s)	45
Bsh1236I	CGCG	3 cut(s)	249, 267, 1798
BshFI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
BshNI	GGYRCC	1 cut(s)	1271
BsiHKCI	CYCGRG	1 cut(s)	95
BsiSI	CCGG	4 cut(s)	66, 223, 275, 443
BslFI	GGGAC	1 cut(s)	1222
BslI	CCNNNNNNNGG	4 cut(s)	281, 661, 1517, 1802
BsmAI	GTCTC	4 cut(s)	27, 59, 651, 1457
BsmBI	CGTCTC	1 cut(s)	1457
BsmFI	GGGAC	1 cut(s)	1222
BsmI	GAATGC	2 cut(s)	1333, 1434
BsnI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
Bso31I	GGTCTC	2 cut(s)	27, 59
BsoBI	CYCGRG	1 cut(s)	95
Bsp13I	TCCGGA	1 cut(s)	222
Bsp1407I	TGTACA	1 cut(s)	1815
Bsp143I	GATC	4 cut(s)	430, 853, 1219, 1729
Bsp1720I	GCTNAGC	5 cut(s)	139, 817, 959, 1647, 1697
BspACI	CCGC	9 cut(s)	63, 102, 120, 247, 267, 419, 1249, 1265, 1796
BspANI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
BspCNI	CTCAG	8 cut(s)	69, 152, 205, 830, 951, 1138, 1639, 1756
BspEI	TCCGGA	1 cut(s)	222
BspFNI	CGCG	3 cut(s)	249, 267, 1798
BspHI	TCATGA	1 cut(s)	1078
BspLI	GGNNCC	4 cut(s)	70, 286, 1273, 1770
BspPI	GGATC	3 cut(s)	438, 848, 1214
BspQI	GCTCTTC	1 cut(s)	111
BspT107I	GGYRCC	1 cut(s)	1271
BspTNI	GGTCTC	2 cut(s)	27, 59
BsrBI	CCGCTC	1 cut(s)	104
BsrDI	GCAATG	1 cut(s)	891
BsrGI	TGTACA	1 cut(s)	1815
BsrI	ACTGG	7 cut(s)	286, 483, 733, 954, 1021, 1522, 1638
BssMI	GATC	4 cut(s)	430, 853, 1219, 1729
BssNAI	GTATAC	1 cut(s)	992
BssNI	GRCGYC	1 cut(s)	191
Bst1107I	GTATAC	1 cut(s)	992
Bst2UI	CCWGG	2 cut(s)	83, 703
Bst4CI	ACNGT	5 cut(s)	989, 1069, 1348, 1768, 1815
Bst6I	CTCTTC	3 cut(s)	111, 267, 992
BstACI	GRCGYC	1 cut(s)	191
BstAUI	TGTACA	1 cut(s)	1815
BstC8I	GCNNGC	1 cut(s)	1468
BstF5I	GGATG	2 cut(s)	1762, 1860
BstFNI	CGCG	3 cut(s)	249, 267, 1798
BstHHI	GCGC	3 cut(s)	1491, 1800, 1860
BstKTI	GATC	4 cut(s)	433, 856, 1222, 1732
BstMAI	GTCTC	4 cut(s)	27, 59, 651, 1457
BstMBI	GATC	4 cut(s)	430, 853, 1219, 1729
BstMWI	GCNNNNNNNGC	3 cut(s)	307, 1264, 1438
BstNI	CCWGG	2 cut(s)	83, 703
BstNSI	RCATGY	2 cut(s)	1528, 1558
BstSCI	CCNGG	2 cut(s)	81, 701
BstSFI	CTRYAG	2 cut(s)	595, 1599
BstUI	CGCG	3 cut(s)	249, 267, 1798
BstV1I	GCAGC	2 cut(s)	134, 393
BstX2I	RGATCY	2 cut(s)	1219, 1729
BstYI	RGATCY	2 cut(s)	1219, 1729
BstZ17I	GTATAC	1 cut(s)	992
Bsu36I	CCTNAGG	1 cut(s)	1774
BsuI	GTATCC	1 cut(s)	920
BsuRI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
BtsCI	GGATG	2 cut(s)	1762, 1860
BtsIMutI	CAGTG	4 cut(s)	440, 947, 1065, 1631
Cac8I	GCNNGC	1 cut(s)	1468
CciI	TCATGA	1 cut(s)	1078
CfoI	GCGC	3 cut(s)	1491, 1800, 1860
Cfr13I	GGNCC	3 cut(s)	43, 641, 714
CseI	GACGC	1 cut(s)	180
Csp6I	GTAC	3 cut(s)	827, 1816, 1825
CviQI	GTAC	3 cut(s)	827, 1816, 1825
DpnI	GATC	4 cut(s)	432, 855, 1221, 1731
DpnII	GATC	4 cut(s)	430, 853, 1219, 1729
DraI	TTTAAA	1 cut(s)	1093
DraIII	CACNNNGTG	2 cut(s)	1166, 1637
EaeI	YGGCCR	2 cut(s)	523, 1018
Eam1104I	CTCTTC	3 cut(s)	111, 267, 992
EarI	CTCTTC	3 cut(s)	111, 267, 992
Eco31I	GGTCTC	2 cut(s)	27, 59
Eco32I	GATATC	1 cut(s)	1354
Eco47I	GGWCC	1 cut(s)	714
Eco57I	CTGAAG	2 cut(s)	1016, 1524
Eco81I	CCTNAGG	1 cut(s)	1774
Eco88I	CYCGRG	1 cut(s)	95
EcoO109I	RGGNCCY	1 cut(s)	641
EcoRI	GAATTC	1 cut(s)	270
EcoRII	CCWGG	2 cut(s)	81, 701
EcoRV	GATATC	1 cut(s)	1354
Esp3I	CGTCTC	1 cut(s)	1457
FalI	AAGNNNNNCTT	2 cut(s)	246, 278
FaqI	GGGAC	1 cut(s)	1222
FblI	GTMKAC	2 cut(s)	991, 1842
Fnu4HI	GCNGC	3 cut(s)	123, 382, 420
FokI	GGATG	2 cut(s)	1769, 1867
Fsp4HI	GCNGC	3 cut(s)	123, 382, 420
FspBI	CTAG	2 cut(s)	638, 1163
FspI	TGCGCA	1 cut(s)	1490
GlaI	GCGC	3 cut(s)	1490, 1799, 1859
GluI	GCNGC	3 cut(s)	123, 382, 420
GsaI	CCCAGC	1 cut(s)	49
GsuI	CTGGAG	1 cut(s)	323
HaeIII	GGCC	5 cut(s)	44, 525, 642, 789, 1020
HapII	CCGG	4 cut(s)	66, 223, 275, 443
HgaI	GACGC	1 cut(s)	180
HhaI	GCGC	3 cut(s)	1491, 1800, 1860
Hin1I	GRCGYC	1 cut(s)	191
Hin6I	GCGC	3 cut(s)	1489, 1798, 1858
HinP1I	GCGC	3 cut(s)	1489, 1798, 1858
HincII	GTYRAC	1 cut(s)	1843
HindII	GTYRAC	1 cut(s)	1843
HinfI	GANTC	7 cut(s)	98, 182, 320, 563, 811, 1277, 1849
HpaII	CCGG	4 cut(s)	66, 223, 275, 443
HphI	GGTGA	4 cut(s)	494, 1178, 1397, 1649
Hpy166II	GTNNAC	4 cut(s)	592, 992, 1834, 1843
Hpy188III	TCNNGA	7 cut(s)	223, 317, 560, 671, 1079, 1377, 1888
Hpy8I	GTNNAC	4 cut(s)	592, 992, 1834, 1843
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	6 cut(s)	153, 286, 358, 365, 779, 1682
HpyCH4III	ACNGT	5 cut(s)	989, 1069, 1348, 1768, 1815
HpyCH4IV	ACGT	1 cut(s)	1396
HpyF10VI	GCNNNNNNNGC	3 cut(s)	307, 1264, 1438
HpySE526I	ACGT	1 cut(s)	1396
Hsp92I	GRCGYC	1 cut(s)	191
HspAI	GCGC	3 cut(s)	1489, 1798, 1858
Kpn2I	TCCGGA	1 cut(s)	222
Kzo9I	GATC	4 cut(s)	430, 853, 1219, 1729
LguI	GCTCTTC	1 cut(s)	111
LmnI	GCTCC	2 cut(s)	1501, 1513
Lsp1109I	GCAGC	2 cut(s)	134, 393
LweI	GCATC	5 cut(s)	337, 487, 1382, 1660, 1845
MaeI	CTAG	2 cut(s)	638, 1163
MaeII	ACGT	1 cut(s)	1396
MaeIII	GTNAC	7 cut(s)	397, 633, 983, 1513, 1520, 1637, 1762
MalI	GATC	4 cut(s)	432, 855, 1221, 1731
MbiI	CCGCTC	1 cut(s)	104
MboI	GATC	4 cut(s)	430, 853, 1219, 1729
MboII	GAAGA	8 cut(s)	98, 185, 254, 380, 403, 1009, 1229, 1587
MfeI	CAATTG	1 cut(s)	38
MflI	RGATCY	2 cut(s)	1219, 1729
MlsI	TGGCCA	2 cut(s)	525, 1020
MluNI	TGGCCA	2 cut(s)	525, 1020
MlyI	GAGTC	1 cut(s)	107
MmeI	TCCRAC	2 cut(s)	408, 1125
Mox20I	TGGCCA	2 cut(s)	525, 1020
MroI	TCCGGA	1 cut(s)	222
MscI	TGGCCA	2 cut(s)	525, 1020
MseI	TTAA	4 cut(s)	1049, 1092, 1655, 1748
MslI	CAYNNNNRTG	2 cut(s)	465, 896
Msp20I	TGGCCA	2 cut(s)	525, 1020
MspA1I	CMGCKG	3 cut(s)	797, 1251, 1604
MspI	CCGG	4 cut(s)	66, 223, 275, 443
MspR9I	CCNGG	2 cut(s)	83, 703
MunI	CAATTG	1 cut(s)	38
Mva1269I	GAATGC	2 cut(s)	1333, 1434
MvaI	CCWGG	2 cut(s)	83, 703
MvnI	CGCG	3 cut(s)	249, 267, 1798
MwoI	GCNNNNNNNGC	3 cut(s)	307, 1264, 1438
NdeII	GATC	4 cut(s)	430, 853, 1219, 1729
NlaIV	GGNNCC	4 cut(s)	70, 286, 1273, 1770
NmuCI	GTSAC	1 cut(s)	1637
NsbI	TGCGCA	1 cut(s)	1490
NspI	RCATGY	2 cut(s)	1528, 1558
PaeR7I	CTCGAG	1 cut(s)	95
PagI	TCATGA	1 cut(s)	1078
PciI	ACATGT	2 cut(s)	1524, 1554
PciSI	GCTCTTC	1 cut(s)	111
PcsI	WCGNNNNNNNCGW	1 cut(s)	870
PctI	GAATGC	2 cut(s)	1333, 1434
PfeI	GAWTC	6 cut(s)	182, 320, 563, 811, 1277, 1849
PkrI	GCNGC	3 cut(s)	124, 383, 421
PleI	GAGTC	1 cut(s)	106
PpsI	GAGTC	1 cut(s)	106
PscI	ACATGT	2 cut(s)	1524, 1554
Psp1406I	AACGTT	1 cut(s)	1396
Psp6I	CCWGG	2 cut(s)	81, 701
PspFI	CCCAGC	1 cut(s)	45
PspGI	CCWGG	2 cut(s)	81, 701
PspN4I	GGNNCC	4 cut(s)	70, 286, 1273, 1770
PspPI	GGNCC	3 cut(s)	43, 641, 714
PspXI	VCTCGAGB	1 cut(s)	95
PsuI	RGATCY	2 cut(s)	1219, 1729
PvuII	CAGCTG	2 cut(s)	797, 1604
RsaI	GTAC	3 cut(s)	828, 1817, 1826
RsaNI	GTAC	3 cut(s)	827, 1816, 1825
RseI	CAYNNNNRTG	2 cut(s)	465, 896
SalI	GTCGAC	1 cut(s)	1841
SapI	GCTCTTC	1 cut(s)	111
SaqAI	TTAA	4 cut(s)	1049, 1092, 1655, 1748
SatI	GCNGC	3 cut(s)	123, 382, 420
Sau3AI	GATC	4 cut(s)	430, 853, 1219, 1729
Sau96I	GGNCC	3 cut(s)	43, 641, 714
SchI	GAGTC	1 cut(s)	107
ScrFI	CCNGG	2 cut(s)	83, 703
SfaNI	GCATC	5 cut(s)	337, 487, 1382, 1660, 1845
SfcI	CTRYAG	2 cut(s)	595, 1599
Sfr274I	CTCGAG	1 cut(s)	95
SinI	GGWCC	1 cut(s)	714
SlaI	CTCGAG	1 cut(s)	95
SmiMI	CAYNNNNRTG	2 cut(s)	465, 896
SmlI	CTYRAG	2 cut(s)	95, 1479
SmoI	CTYRAG	2 cut(s)	95, 1479
SsiI	CCGC	9 cut(s)	63, 102, 120, 247, 267, 419, 1249, 1265, 1796
SspMI	CTAG	2 cut(s)	638, 1163
StyD4I	CCNGG	2 cut(s)	81, 701
TaaI	ACNGT	5 cut(s)	989, 1069, 1348, 1768, 1815
TaiI	ACGT	1 cut(s)	1399
TaqI	TCGA	3 cut(s)	89, 96, 1842
TatI	WGTACW	2 cut(s)	1815, 1824
TauI	GCSGC	1 cut(s)	422
TfiI	GAWTC	6 cut(s)	182, 320, 563, 811, 1277, 1849
Tru1I	TTAA	4 cut(s)	1049, 1092, 1655, 1748
Tru9I	TTAA	4 cut(s)	1049, 1092, 1655, 1748
TscAI	CASTG	4 cut(s)	440, 954, 1072, 1638
TseFI	GTSAC	1 cut(s)	1637
TseI	GCWGC	2 cut(s)	122, 381
Tsp45I	GTSAC	1 cut(s)	1637
TspDTI	ATGAA	6 cut(s)	186, 245, 574, 917, 1299, 1433
TspGWI	ACGGA	1 cut(s)	1358
TspRI	CASTG	4 cut(s)	440, 954, 1072, 1638
VpaK11BI	GGWCC	1 cut(s)	714
XapI	RAATTY	5 cut(s)	270, 674, 686, 1286, 1876
XceI	RCATGY	2 cut(s)	1528, 1558
XcmI	CCANNNNNNNNNTGG	2 cut(s)	79, 518
XhoI	CTCGAG	1 cut(s)	95
XmiI	GTMKAC	2 cut(s)	991, 1842
XspI	CTAG	2 cut(s)	638, 1163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.