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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0309591 RchiOBHm_Chr6g0309611 |
| rosa_laevigata | RLG00000010550 |
| rosa_multiflora | Rmu_sc0007632.1_g000001 Rmu_sc0007632.1_g000003 Rmu_sc0008462.1_g000004 |
| rosa_rugosa | Rorug06G0373000 Rorug06G0373000 Rorug06G0373100 |
| rosa_samantha | Rh6AG486700 Rh6BG496000 Rh6BG496100 Rh6BG496300 Rh6CG500900 Rh6CG501000 Rh6DG486800 Rh6DG486900 Rh6DG487100 |
| rosa_wichuraiana | Rw6G042380 Rw6G042390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1111 |
| Acc36I | ACCTGC | 1 cut(s) | 1312 |
| AccB1I | GGYRCC | 3 cut(s) | 11, 76, 187 |
| AccBSI | CCGCTC | 1 cut(s) | 3311 |
| AccI | GTMKAC | 2 cut(s) | 1840, 2777 |
| AccII | CGCG | 2 cut(s) | 379, 838 |
| AciI | CCGC | 9 cut(s) | 102, 134, 165, 182, 191, 398, 836, 1369, 3309 |
| AclWI | GGATC | 4 cut(s) | 626, 907, 1974, 2164 |
| AcsI | RAATTY | 1 cut(s) | 600 |
| AcuI | CTGAAG | 5 cut(s) | 1247, 1325, 2267, 2631, 2700 |
| AcvI | CACGTG | 1 cut(s) | 94 |
| AcyI | GRCGYC | 3 cut(s) | 12, 77, 188 |
| AdeI | CACNNNGTG | 2 cut(s) | 512, 1727 |
| AfaI | GTAC | 3 cut(s) | 442, 2017, 3199 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1940, 2527 |
| AflIII | ACRYGT | 2 cut(s) | 760, 2131 |
| AhlI | ACTAGT | 2 cut(s) | 464, 1751 |
| AjiI | CACGTC | 2 cut(s) | 120, 1667 |
| AjnI | CCWGG | 3 cut(s) | 23, 562, 1323 |
| Alw21I | GWGCWC | 2 cut(s) | 256, 1745 |
| AlwI | GGATC | 4 cut(s) | 626, 907, 1974, 2164 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 902, 2605 |
| Ama87I | CYCGRG | 2 cut(s) | 255, 2817 |
| AoxI | GGCC | 1 cut(s) | 159 |
| ApoI | RAATTY | 1 cut(s) | 600 |
| AseI | ATTAAT | 1 cut(s) | 435 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 320, 1260, 2464 |
| AspLEI | GCGC | 5 cut(s) | 14, 79, 190, 381, 403 |
| AspS9I | GGNCC | 3 cut(s) | 27, 60, 362 |
| AsuC2I | CCSGG | 2 cut(s) | 64, 510 |
| AsuNHI | GCTAGC | 2 cut(s) | 1525, 3218 |
| AvaI | CYCGRG | 2 cut(s) | 255, 2817 |
| AvaII | GGWCC | 3 cut(s) | 27, 60, 362 |
| BanI | GGYRCC | 3 cut(s) | 11, 76, 187 |
| BanII | GRGCYC | 4 cut(s) | 182, 950, 1745, 2818 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2937, 2969 |
| BbrPI | CACGTG | 1 cut(s) | 94 |
| BbsI | GAAGAC | 4 cut(s) | 114, 482, 1326, 1669 |
| Bbv12I | GWGCWC | 2 cut(s) | 256, 1745 |
| BbvCI | CCTCAGC | 1 cut(s) | 3060 |
| BccI | CCATC | 7 cut(s) | 290, 998, 1279, 1674, 1811, 1868, 3187 |
| BceAI | ACGGC | 4 cut(s) | 37, 64, 121, 3115 |
| BciT130I | CCWGG | 3 cut(s) | 25, 564, 1325 |
| BciVI | GTATCC | 1 cut(s) | 2271 |
| BclI | TGATCA | 1 cut(s) | 1852 |
| BcnI | CCSGG | 2 cut(s) | 64, 510 |
| BcuI | ACTAGT | 2 cut(s) | 464, 1751 |
| BfmI | CTRYAG | 4 cut(s) | 1911, 2294, 2652, 2870 |
| BfoI | RGCGCY | 3 cut(s) | 15, 80, 191 |
| BfuAI | ACCTGC | 1 cut(s) | 1312 |
| BfuI | GTATCC | 1 cut(s) | 2271 |
| BglII | AGATCT | 1 cut(s) | 2545 |
| Bme1390I | CCNGG | 5 cut(s) | 25, 64, 510, 564, 1325 |
| Bme18I | GGWCC | 3 cut(s) | 27, 60, 362 |
| BmeT110I | CYCGRG | 2 cut(s) | 255, 2817 |
| BmgBI | CACGTC | 2 cut(s) | 120, 1667 |
| BmgT120I | GGNCC | 3 cut(s) | 27, 60, 362 |
| BmiI | GGNNCC | 5 cut(s) | 13, 29, 62, 78, 189 |
| BmrFI | CCNGG | 5 cut(s) | 25, 64, 510, 564, 1325 |
| BmrI | ACTGGG | 1 cut(s) | 868 |
| BmsI | GCATC | 5 cut(s) | 655, 1316, 1561, 2488, 3233 |
| BmtI | GCTAGC | 2 cut(s) | 1529, 3222 |
| BmuI | ACTGGG | 1 cut(s) | 868 |
| BoxI | GACNNNNGTC | 1 cut(s) | 136 |
| BpiI | GAAGAC | 4 cut(s) | 114, 482, 1326, 1669 |
| BpmI | CTGGAG | 3 cut(s) | 7, 154, 2933 |
| Bpu10I | CCTNAGC | 2 cut(s) | 669, 3060 |
| BpuEI | CTTGAG | 5 cut(s) | 196, 2183, 2273, 2492, 3107 |
| BpuMI | CCSGG | 2 cut(s) | 64, 510 |
| Bsa29I | ATCGAT | 1 cut(s) | 1203 |
| BsaAI | YACGTR | 2 cut(s) | 94, 2132 |
| BsaHI | GRCGYC | 3 cut(s) | 12, 77, 188 |
| BsaJI | CCNNGG | 3 cut(s) | 210, 563, 1398 |
| BsaWI | WCCGGW | 2 cut(s) | 57, 743 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 488, 518 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1940, 2527 |
| Bse118I | RCCGGY | 3 cut(s) | 73, 157, 184 |
| Bse1I | ACTGG | 7 cut(s) | 528, 874, 931, 1927, 1945, 2439, 2725 |
| Bse3DI | GCAATG | 2 cut(s) | 333, 3181 |
| BseBI | CCWGG | 3 cut(s) | 25, 564, 1325 |
| BseCI | ATCGAT | 1 cut(s) | 1203 |
| BseDI | CCNNGG | 3 cut(s) | 210, 563, 1398 |
| BseGI | GGATG | 8 cut(s) | 541, 670, 1685, 1822, 2107, 2854, 3070, 3307 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1940, 2527 |
| BseMI | GCAATG | 2 cut(s) | 333, 3181 |
| BseNI | ACTGG | 7 cut(s) | 528, 874, 931, 1927, 1945, 2439, 2725 |
| BseRI | GAGGAG | 4 cut(s) | 949, 1142, 1400, 2879 |
| BseYI | CCCAGC | 2 cut(s) | 30, 1997 |
| Bsh1236I | CGCG | 2 cut(s) | 379, 838 |
| Bsh1285I | CGRYCG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 161 |
| BshNI | GGYRCC | 3 cut(s) | 11, 76, 187 |
| BshVI | ATCGAT | 1 cut(s) | 1203 |
| BsiEI | CGRYCG | 1 cut(s) | 134 |
| BsiHKAI | GWGCWC | 2 cut(s) | 256, 1745 |
| BsiHKCI | CYCGRG | 2 cut(s) | 255, 2817 |
| BsiSI | CCGG | 8 cut(s) | 9, 58, 64, 74, 158, 185, 510, 744 |
| BslFI | GGGAC | 6 cut(s) | 13, 46, 84, 287, 314, 856 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1940, 2527 |
| BsmBI | CGTCTC | 1 cut(s) | 132 |
| BsmFI | GGGAC | 6 cut(s) | 13, 46, 84, 287, 314, 856 |
| BsmI | GAATGC | 3 cut(s) | 1504, 1677, 2009 |
| BsnI | GGCC | 1 cut(s) | 161 |
| BsoBI | CYCGRG | 2 cut(s) | 255, 2817 |
| Bsp1286I | GDGCHC | 5 cut(s) | 182, 256, 950, 1745, 2818 |
| Bsp1407I | TGTACA | 1 cut(s) | 2015 |
| BspACI | CCGC | 9 cut(s) | 102, 134, 165, 182, 191, 398, 836, 1369, 3309 |
| BspANI | GGCC | 1 cut(s) | 161 |
| BspDI | ATCGAT | 1 cut(s) | 1203 |
| BspFNI | CGCG | 2 cut(s) | 379, 838 |
| BspLI | GGNNCC | 5 cut(s) | 13, 29, 62, 78, 189 |
| BspMAI | CTGCAG | 3 cut(s) | 1915, 2656, 2874 |
| BspMI | ACCTGC | 1 cut(s) | 1312 |
| BspOI | GCTAGC | 2 cut(s) | 1529, 3222 |
| BspPI | GGATC | 4 cut(s) | 626, 907, 1974, 2164 |
| BspQI | GCTCTTC | 3 cut(s) | 744, 1251, 1750 |
| BspT107I | GGYRCC | 3 cut(s) | 11, 76, 187 |
| BsrBI | CCGCTC | 1 cut(s) | 3311 |
| BsrDI | GCAATG | 2 cut(s) | 333, 3181 |
| BsrFI | RCCGGY | 3 cut(s) | 73, 157, 184 |
| BsrGI | TGTACA | 1 cut(s) | 2015 |
| BsrI | ACTGG | 7 cut(s) | 528, 874, 931, 1927, 1945, 2439, 2725 |
| BssAI | RCCGGY | 3 cut(s) | 73, 157, 184 |
| BssECI | CCNNGG | 3 cut(s) | 210, 563, 1398 |
| BssNI | GRCGYC | 3 cut(s) | 12, 77, 188 |
| BssT1I | CCWWGG | 2 cut(s) | 210, 1398 |
| Bst2UI | CCWGG | 3 cut(s) | 25, 564, 1325 |
| Bst4CI | ACNGT | 7 cut(s) | 226, 232, 310, 445, 985, 2571, 3321 |
| Bst6I | CTCTTC | 6 cut(s) | 744, 1251, 1377, 1603, 1750, 3078 |
| BstACI | GRCGYC | 3 cut(s) | 12, 77, 188 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 487, 3371 |
| BstAUI | TGTACA | 1 cut(s) | 2015 |
| BstBAI | YACGTR | 2 cut(s) | 94, 2132 |
| BstC8I | GCNNGC | 9 cut(s) | 75, 159, 182, 186, 968, 1527, 2046, 3009, 3220 |
| BstEII | GGTNACC | 1 cut(s) | 2723 |
| BstF5I | GGATG | 8 cut(s) | 541, 670, 1685, 1822, 2107, 2854, 3070, 3307 |
| BstFNI | CGCG | 2 cut(s) | 379, 838 |
| BstH2I | RGCGCY | 3 cut(s) | 15, 80, 191 |
| BstHHI | GCGC | 5 cut(s) | 14, 79, 190, 381, 403 |
| BstMCI | CGRYCG | 1 cut(s) | 134 |
| BstNI | CCWGG | 3 cut(s) | 25, 564, 1325 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 136 |
| BstPI | GGTNACC | 1 cut(s) | 2723 |
| BstSCI | CCNGG | 5 cut(s) | 23, 62, 508, 562, 1323 |
| BstSFI | CTRYAG | 4 cut(s) | 1911, 2294, 2652, 2870 |
| BstUI | CGCG | 2 cut(s) | 379, 838 |
| BstV2I | GAAGAC | 4 cut(s) | 114, 482, 1326, 1669 |
| BstX2I | RGATCY | 3 cut(s) | 899, 1966, 2545 |
| BstYI | RGATCY | 3 cut(s) | 899, 1966, 2545 |
| Bsu15I | ATCGAT | 1 cut(s) | 1203 |
| BsuI | GTATCC | 1 cut(s) | 2271 |
| BsuRI | GGCC | 1 cut(s) | 161 |
| BsuTUI | ATCGAT | 1 cut(s) | 1203 |
| BtrI | CACGTC | 2 cut(s) | 120, 1667 |
| BtsCI | GGATG | 8 cut(s) | 541, 670, 1685, 1822, 2107, 2854, 3070, 3307 |
| BtsI | GCAGTG | 2 cut(s) | 534, 2664 |
| BveI | ACCTGC | 1 cut(s) | 1312 |
| Cac8I | GCNNGC | 9 cut(s) | 75, 159, 182, 186, 968, 1527, 2046, 3009, 3220 |
| CaiI | CAGNNNCTG | 2 cut(s) | 902, 2605 |
| CfoI | GCGC | 5 cut(s) | 14, 79, 190, 381, 403 |
| Cfr10I | RCCGGY | 3 cut(s) | 73, 157, 184 |
| Cfr13I | GGNCC | 3 cut(s) | 27, 60, 362 |
| ClaI | ATCGAT | 1 cut(s) | 1203 |
| CseI | GACGC | 3 cut(s) | 86, 487, 1101 |
| CsiI | ACCWGGT | 1 cut(s) | 1323 |
| Csp6I | GTAC | 3 cut(s) | 441, 2016, 3198 |
| CviQI | GTAC | 3 cut(s) | 441, 2016, 3198 |
| DinI | GGCGCC | 3 cut(s) | 13, 78, 189 |
| DraI | TTTAAA | 3 cut(s) | 1251, 1335, 1687 |
| DraIII | CACNNNGTG | 2 cut(s) | 512, 1727 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1111 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1111 |
| Eam1104I | CTCTTC | 6 cut(s) | 744, 1251, 1377, 1603, 1750, 3078 |
| EarI | CTCTTC | 6 cut(s) | 744, 1251, 1377, 1603, 1750, 3078 |
| EciI | GGCGGA | 1 cut(s) | 154 |
| Ecl136II | GAGCTC | 1 cut(s) | 1743 |
| Eco130I | CCWWGG | 2 cut(s) | 210, 1398 |
| Eco24I | GRGCYC | 4 cut(s) | 182, 950, 1745, 2818 |
| Eco32I | GATATC | 2 cut(s) | 990, 1618 |
| Eco47I | GGWCC | 3 cut(s) | 27, 60, 362 |
| Eco53kI | GAGCTC | 1 cut(s) | 1743 |
| Eco57I | CTGAAG | 5 cut(s) | 1247, 1325, 2267, 2631, 2700 |
| Eco72I | CACGTG | 1 cut(s) | 94 |
| Eco88I | CYCGRG | 2 cut(s) | 255, 2817 |
| Eco91I | GGTNACC | 1 cut(s) | 2723 |
| EcoICRI | GAGCTC | 1 cut(s) | 1743 |
| EcoO109I | RGGNCCY | 1 cut(s) | 27 |
| EcoO65I | GGTNACC | 1 cut(s) | 2723 |
| EcoRII | CCWGG | 3 cut(s) | 23, 562, 1323 |
| EcoRV | GATATC | 2 cut(s) | 990, 1618 |
| EcoT14I | CCWWGG | 2 cut(s) | 210, 1398 |
| EcoT22I | ATGCAT | 2 cut(s) | 492, 2503 |
| EcoT38I | GRGCYC | 4 cut(s) | 182, 950, 1745, 2818 |
| EgeI | GGCGCC | 3 cut(s) | 13, 78, 189 |
| EheI | GGCGCC | 3 cut(s) | 13, 78, 189 |
| ErhI | CCWWGG | 2 cut(s) | 210, 1398 |
| Esp3I | CGTCTC | 1 cut(s) | 132 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1570, 1602, 2764, 2796, 3069, 3101 |
| FaqI | GGGAC | 6 cut(s) | 13, 46, 84, 287, 314, 856 |
| FauI | CCCGC | 2 cut(s) | 109, 189 |
| FauNDI | CATATG | 3 cut(s) | 454, 2785, 3148 |
| FbaI | TGATCA | 1 cut(s) | 1852 |
| FblI | GTMKAC | 2 cut(s) | 1840, 2777 |
| FokI | GGATG | 8 cut(s) | 548, 677, 1692, 1829, 2114, 2861, 3077, 3314 |
| FriOI | GRGCYC | 4 cut(s) | 182, 950, 1745, 2818 |
| GlaI | GCGC | 5 cut(s) | 13, 78, 189, 380, 402 |
| GsaI | CCCAGC | 2 cut(s) | 34, 2001 |
| GsuI | CTGGAG | 3 cut(s) | 7, 154, 2933 |
| HaeII | RGCGCY | 3 cut(s) | 15, 80, 191 |
| HaeIII | GGCC | 1 cut(s) | 161 |
| HapII | CCGG | 8 cut(s) | 9, 58, 64, 74, 158, 185, 510, 744 |
| HgaI | GACGC | 3 cut(s) | 86, 487, 1101 |
| HhaI | GCGC | 5 cut(s) | 14, 79, 190, 381, 403 |
| Hin1I | GRCGYC | 3 cut(s) | 12, 77, 188 |
| Hin6I | GCGC | 5 cut(s) | 12, 77, 188, 379, 401 |
| HinP1I | GCGC | 5 cut(s) | 12, 77, 188, 379, 401 |
| HincII | GTYRAC | 1 cut(s) | 1798 |
| HindII | GTYRAC | 1 cut(s) | 1798 |
| HindIII | AAGCTT | 5 cut(s) | 964, 1337, 2216, 2622, 2693 |
| HpaI | GTTAAC | 1 cut(s) | 1798 |
| HpaII | CCGG | 8 cut(s) | 9, 58, 64, 74, 158, 185, 510, 744 |
| Hpy166II | GTNNAC | 5 cut(s) | 1760, 1798, 1841, 2778, 3101 |
| Hpy8I | GTNNAC | 5 cut(s) | 1760, 1798, 1841, 2778, 3101 |
| HpyCH4III | ACNGT | 7 cut(s) | 226, 232, 310, 445, 985, 2571, 3321 |
| HpyCH4IV | ACGT | 7 cut(s) | 93, 119, 762, 1276, 1666, 2131, 2983 |
| HpySE526I | ACGT | 7 cut(s) | 93, 119, 762, 1276, 1666, 2131, 2983 |
| Hsp92I | GRCGYC | 3 cut(s) | 12, 77, 188 |
| HspAI | GCGC | 5 cut(s) | 12, 77, 188, 379, 401 |
| KasI | GGCGCC | 3 cut(s) | 11, 76, 187 |
| KroI | GCCGGC | 3 cut(s) | 73, 157, 184 |
| KroNI | GCCGGC | 3 cut(s) | 75, 159, 186 |
| Ksp22I | TGATCA | 1 cut(s) | 1852 |
| KspAI | GTTAAC | 1 cut(s) | 1798 |
| LguI | GCTCTTC | 3 cut(s) | 744, 1251, 1750 |
| LmnI | GCTCC | 6 cut(s) | 496, 1161, 2287, 2404, 2662, 2866 |
| LweI | GCATC | 5 cut(s) | 655, 1316, 1561, 2488, 3233 |
| MabI | ACCWGGT | 1 cut(s) | 1323 |
| MaeII | ACGT | 7 cut(s) | 93, 119, 762, 1276, 1666, 2131, 2983 |
| MaeIII | GTNAC | 9 cut(s) | 220, 226, 460, 504, 862, 2489, 2686, 2723, 3304 |
| MbiI | CCGCTC | 1 cut(s) | 3311 |
| MflI | RGATCY | 3 cut(s) | 899, 1966, 2545 |
| MhlI | GDGCHC | 5 cut(s) | 182, 256, 950, 1745, 2818 |
| Mly113I | GGCGCC | 3 cut(s) | 12, 77, 188 |
| MlyI | GAGTC | 5 cut(s) | 1285, 1862, 2164, 2218, 3098 |
| MmeI | TCCRAC | 3 cut(s) | 659, 1961, 2823 |
| Mph1103I | ATGCAT | 2 cut(s) | 492, 2503 |
| MreI | CGCCGGCG | 2 cut(s) | 73, 184 |
| MroNI | GCCGGC | 3 cut(s) | 73, 157, 184 |
| MroXI | GAANNNNTTC | 3 cut(s) | 320, 1260, 2464 |
| MslI | CAYNNNNRTG | 2 cut(s) | 387, 3147 |
| MspA1I | CMGCKG | 2 cut(s) | 1345, 2651 |
| MspI | CCGG | 8 cut(s) | 9, 58, 64, 74, 158, 185, 510, 744 |
| MspR9I | CCNGG | 5 cut(s) | 25, 64, 510, 564, 1325 |
| MssI | GTTTAAAC | 1 cut(s) | 1687 |
| Mva1269I | GAATGC | 3 cut(s) | 1504, 1677, 2009 |
| MvaI | CCWGG | 3 cut(s) | 25, 564, 1325 |
| MvnI | CGCG | 2 cut(s) | 379, 838 |
| NaeI | GCCGGC | 3 cut(s) | 75, 159, 186 |
| NarI | GGCGCC | 3 cut(s) | 12, 77, 188 |
| NciI | CCSGG | 2 cut(s) | 64, 510 |
| NdeI | CATATG | 3 cut(s) | 454, 2785, 3148 |
| NgoMIV | GCCGGC | 3 cut(s) | 73, 157, 184 |
| NheI | GCTAGC | 2 cut(s) | 1525, 3218 |
| NlaIV | GGNNCC | 5 cut(s) | 13, 29, 62, 78, 189 |
| NmuCI | GTSAC | 6 cut(s) | 220, 226, 504, 862, 2723, 3304 |
| NsiI | ATGCAT | 2 cut(s) | 492, 2503 |
| PaeR7I | CTCGAG | 1 cut(s) | 2817 |
| PciSI | GCTCTTC | 3 cut(s) | 744, 1251, 1750 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 77 |
| PctI | GAATGC | 3 cut(s) | 1504, 1677, 2009 |
| PdiI | GCCGGC | 3 cut(s) | 75, 159, 186 |
| PdmI | GAANNNNTTC | 3 cut(s) | 320, 1260, 2464 |
| PfoI | TCCNGGA | 1 cut(s) | 62 |
| PleI | GAGTC | 5 cut(s) | 1285, 1862, 2164, 2218, 3097 |
| PluTI | GGCGCC | 3 cut(s) | 15, 80, 191 |
| PmaCI | CACGTG | 1 cut(s) | 94 |
| PmeI | GTTTAAAC | 1 cut(s) | 1687 |
| PmlI | CACGTG | 1 cut(s) | 94 |
| PpsI | GAGTC | 5 cut(s) | 1285, 1862, 2164, 2218, 3097 |
| Ppu21I | YACGTR | 2 cut(s) | 94, 2132 |
| PpuMI | RGGWCCY | 1 cut(s) | 27 |
| PshAI | GACNNNNGTC | 1 cut(s) | 136 |
| PshBI | ATTAAT | 1 cut(s) | 435 |
| Psp124BI | GAGCTC | 1 cut(s) | 1745 |
| Psp5II | RGGWCCY | 1 cut(s) | 27 |
| Psp6I | CCWGG | 3 cut(s) | 23, 562, 1323 |
| PspCI | CACGTG | 1 cut(s) | 94 |
| PspEI | GGTNACC | 1 cut(s) | 2723 |
| PspFI | CCCAGC | 2 cut(s) | 30, 1997 |
| PspGI | CCWGG | 3 cut(s) | 23, 562, 1323 |
| PspN4I | GGNNCC | 5 cut(s) | 13, 29, 62, 78, 189 |
| PspPI | GGNCC | 3 cut(s) | 27, 60, 362 |
| PspPPI | RGGWCCY | 1 cut(s) | 27 |
| PspXI | VCTCGAGB | 1 cut(s) | 2817 |
| PstI | CTGCAG | 3 cut(s) | 1915, 2656, 2874 |
| PstNI | CAGNNNCTG | 2 cut(s) | 902, 2605 |
| PsuI | RGATCY | 3 cut(s) | 899, 1966, 2545 |
| PvuII | CAGCTG | 2 cut(s) | 1345, 2651 |
| RsaI | GTAC | 3 cut(s) | 442, 2017, 3199 |
| RsaNI | GTAC | 3 cut(s) | 441, 2016, 3198 |
| RseI | CAYNNNNRTG | 2 cut(s) | 387, 3147 |
| SacI | GAGCTC | 1 cut(s) | 1745 |
| SapI | GCTCTTC | 3 cut(s) | 744, 1251, 1750 |
| Sau96I | GGNCC | 3 cut(s) | 27, 60, 362 |
| SchI | GAGTC | 5 cut(s) | 1285, 1862, 2164, 2218, 3098 |
| ScrFI | CCNGG | 5 cut(s) | 25, 64, 510, 564, 1325 |
| SduI | GDGCHC | 5 cut(s) | 182, 256, 950, 1745, 2818 |
| SexAI | ACCWGGT | 1 cut(s) | 1323 |
| SfaNI | GCATC | 5 cut(s) | 655, 1316, 1561, 2488, 3233 |
| SfcI | CTRYAG | 4 cut(s) | 1911, 2294, 2652, 2870 |
| SfoI | GGCGCC | 3 cut(s) | 13, 78, 189 |
| Sfr274I | CTCGAG | 1 cut(s) | 2817 |
| SgrAI | CRCCGGYG | 2 cut(s) | 73, 184 |
| SinI | GGWCC | 3 cut(s) | 27, 60, 362 |
| SlaI | CTCGAG | 1 cut(s) | 2817 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 387, 3147 |
| SmlI | CTYRAG | 6 cut(s) | 175, 2162, 2252, 2471, 2817, 3086 |
| SmoI | CTYRAG | 6 cut(s) | 175, 2162, 2252, 2471, 2817, 3086 |
| SpeI | ACTAGT | 2 cut(s) | 464, 1751 |
| SsiI | CCGC | 9 cut(s) | 102, 134, 165, 182, 191, 398, 836, 1369, 3309 |
| SspDI | GGCGCC | 3 cut(s) | 11, 76, 187 |
| SstI | GAGCTC | 1 cut(s) | 1745 |
| StyD4I | CCNGG | 5 cut(s) | 23, 62, 508, 562, 1323 |
| StyI | CCWWGG | 2 cut(s) | 210, 1398 |
| TaaI | ACNGT | 7 cut(s) | 226, 232, 310, 445, 985, 2571, 3321 |
| TaiI | ACGT | 7 cut(s) | 96, 122, 765, 1279, 1669, 2134, 2986 |
| TaqI | TCGA | 5 cut(s) | 130, 1030, 1203, 2183, 2818 |
| TatI | WGTACW | 1 cut(s) | 2015 |
| TauI | GCSGC | 2 cut(s) | 193, 401 |
| TseFI | GTSAC | 6 cut(s) | 220, 226, 504, 862, 2723, 3304 |
| Tsp45I | GTSAC | 6 cut(s) | 220, 226, 504, 862, 2723, 3304 |
| TspGWI | ACGGA | 1 cut(s) | 1513 |
| VpaK11BI | GGWCC | 3 cut(s) | 27, 60, 362 |
| VspI | ATTAAT | 1 cut(s) | 435 |
| XapI | RAATTY | 1 cut(s) | 600 |
| XhoI | CTCGAG | 1 cut(s) | 2817 |
| XmiI | GTMKAC | 2 cut(s) | 1840, 2777 |
| XmnI | GAANNNNTTC | 3 cut(s) | 320, 1260, 2464 |
| Zsp2I | ATGCAT | 2 cut(s) | 492, 2503 |