Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003245

Physical Location & Seq

Genomic Coordinates Reverse (-)

59481457 .. 59484221

Gene Structure 2765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0472000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGGTGGGGCTCACAGCCGCGAAGATCTTGAGCTTATAGACTCAGACGAAGAAGAGCAACAAAGCGAAGGGGAAGAGAACTTCCAGGACGCCGAGGAAAAGATTCAGAGATCGGCGGAGCGCGGACCCAGAACGCCGGCGTCGGTGGATGACGTGGAGGCCAAGCTCAAGGCTTTGAAGCTCAAGTACGCGTCGACGTCGCAGGCCCCAAATCTGAAAAATGCGGTGAAGCTGTATGTTCATGTTGGAGGGAACACCCCCAAAGCGAAATGGGTAACCTCTGAAAAACTCACCTCTTACTCTTTTTGTAAGACCTGTAGAATGGAAGTGGATGATGATGAGGAAGATGTTGAGGAGGAGAGGGAAGATTCGTGGTGGATTTTGAGGGTGGGTTCGAAGATTAGGGTTAAAGTTTCGGCTGAGATGCAAATGAAGACGTTTGGGAGGGAGCGTCGGGTTGATTTTGTGGCCCGGGGAGTCTGGGCTATGAAGTTCTTTAGTGTGGAGGATTATAGGGTTTTCGTTGCTAAGTATACTGATTGTATGTTTGAGAACACTTATGGATATGAGGCAACGGAGCAGAACAGGGTTAAGGTGTATGGGAAGGATTTTATTGGGTGGGCAAAGCCAGAAGCAGCGGATGATTCTGTTTGGGAGGATGCTGAGGAGAGTTTACTGAGAAGCCCGGGCTCTGCAACCCCGGTGAGAGCGAATCAGGACTTGAGGGAGGAGTTTGAGGAAGCGGCACATGGAGGTATACAGAGCTTGGCATTGGGTGCATTGGACAATAGTTTCTTGGTGGGAGACTCTGGCATTCAGGTTGTTAAGAATTACAGTCATGGAATACAGGGGAAAGGTGTTTATGTCAATTTTGATGATGGGAGTTATAGAGGTGGCTCAAATTTGGCACGCTCCACGCCTAGGAAGGCTCTGCTGATGAAGGCTGAAACCAATATGCTGCTCATGAGTCCAATGAATGAGGGCAAGCCTCATACAACAGGACTTCATCAGTTTGACATTGAAACTGGAAAGGTTGTGACTGAGTGGAAGTTCGAAAAGGATGGGACTGATATTACAATGAAGGATATTGCAAATGACAGCAAGGGAGCACAGTTGGATCCTTCAGGGTCCACATTCTTGGGACTGGATGATAACAGGCTTTGCCGTTGGGATATGCGTGATAGGAAAGGGATGGTTCAGGATCTTGCAAGTGCTAATACTCCTATTCTCAATTGGAACCAAGGGCATCAGTTCTCCAGAGGAACTAACTTTCAGTGCTTTGCTAGTACTGGTGATGGCTCAATTGTTGTGGGGTCTCTTGATGGGAAGATCCGGTTGTATTCAATCAATTCTATGAGGCAAGCCAAAACAGCTTTTCCTGGCCTTGGTTCTCCTATTACGCATGTGGATGTTACGTACGATGGAAAGTGGATCCTGGGAACAACTGACACCTATTTGATCCTCATCTGTACCATGTTTACTGATAAGGATGGGAAGACAAAGACAGGCTTTGCTGGGCGTATGGGGAATAGGATCTCCGCTCCAAGGTTGTTGAAGCTGAATCCTCTGGATTCTCACTTGGCAGGCACTAATAACAAGTTTCGTAATGCCCAGTTTTCATGGGTCACAGAGAATGGGAAGCAGGAGCGCCATTTGGTTGCAACTGTTGGAAAGTTTAGTGTGATTTGGAATTTCCAACAGGTGAAGGACGGGTCACATGAGTGCTACCTAAATCAGGAGGGCTTGAAGAGTTGTTATTGCTATAAGATAGTCCTGAAGGATGATTCCATTGTTGATAGTCGCTTCATGCACGACAAATTTGCAGTCACCGACTCACCTGAAGCCCCACTTGTGATTGCAACGCCATTGAAAGTCAGCTCCTTCAGCATATCCAGTAGGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00061 ko00780 ko01100 ko01212 map00061 map00780 map01100 map01212

Pfam Domains

Protein Families

Ketoacyl-synt_C ketoacyl-synt

Protein Analysis

634

Amino Acids

70.94

Weight (kDa)

5.72

Isoelectric Point (pI)

29.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7135	PF23581	39 - 201	2.3e-78	Domain of unknown function (DUF7135)
VID27	PF08553	262 - 577	2.7e-43	VID27 C-terminal WD40-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46290 AT5G46290 AT5G46290
fragaria_vesca	FvH4_3g05870 FvH4_3g05870 FvH4_5g11700 FvH4_5g11700
malus_domestica	MD05G1286700.v1.1 MD06G1110900.v1.1 MD10G1264200.v1.1 MD14G1131500.v1.1
prunus_persica	Prupe.4G078200_v2.0.a1 Prupe.5G123300_v2.0.a1
pyrus_communis	pycom05g26510 pycom06g10370 pycom06g10380 pycom10g22030
rosa_chinensis	RchiOBHm_Chr5g0013571 RchiOBHm_Chr7g0186071
rosa_laevigata	RLG00000004868 RLG00000032029
rosa_multiflora	Rmu_sc0000194.1_g000023 Rmu_sc0002573.1_g000019
rosa_roxburghii	Rroxscaffold_1G00063000 Rroxscaffold_3G00268460
rosa_rugosa	Rorug05G0011100 Rorug06G0472000
rosa_samantha	Rh5AG105700 Rh5BG102000 Rh5CG113800 Rh5DG100500 Rh7AG069900 Rh7BG085900 Rh7CG078400 Rh7DG078400
rosa_wichuraiana	Rw5G009210 Rw7G006520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	200
AccBSI	CCGCTC	1 cut(s)	1541
AccI	GTMKAC	3 cut(s)	194, 533, 757
AccII	CGCG	3 cut(s)	21, 123, 191
AciI	CCGC	7 cut(s)	19, 116, 123, 224, 638, 743, 1539
AclWI	GGATC	8 cut(s)	1112, 1125, 1209, 1324, 1426, 1439, 1453, 1541
AcsI	RAATTY	3 cut(s)	901, 1690, 1817
AcuI	CTGAAG	4 cut(s)	1107, 1796, 1860, 1867
AcyI	GRCGYC	3 cut(s)	90, 140, 197
AfaI	GTAC	4 cut(s)	188, 1288, 1418, 1471
AfiI	CCNNNNNNNGG	4 cut(s)	921, 1385, 1545, 1735
AflIII	ACRYGT	1 cut(s)	189
AgsI	TTSAA	6 cut(s)	178, 1022, 1344, 1555, 1747, 1870
AjiI	CACGTC	1 cut(s)	154
AjnI	CCWGG	3 cut(s)	84, 1378, 1434
AleI	CACNNNNGTG	1 cut(s)	1720
AluBI	AGCT	8 cut(s)	34, 166, 181, 232, 765, 1373, 1558, 1878
AluI	AGCT	8 cut(s)	34, 166, 181, 232, 765, 1373, 1558, 1878
Alw21I	GWGCWC	1 cut(s)	1111
Alw26I	GTCTC	2 cut(s)	798, 1320
AlwI	GGATC	8 cut(s)	1112, 1125, 1209, 1324, 1426, 1439, 1453, 1541
Ama87I	CYCGRG	2 cut(s)	471, 685
AoxI	GGCC	4 cut(s)	159, 204, 468, 1381
ApeKI	GCWGC	2 cut(s)	635, 958
ApoI	RAATTY	3 cut(s)	901, 1690, 1817
ArsI	GACNNNNNNTTYG	2 cut(s)	1809, 1841
Asp700I	GAANNNNTTC	1 cut(s)	102
AspA2I	CCTAGG	1 cut(s)	920
AspLEI	GCGC	2 cut(s)	123, 1650
AspS9I	GGNCC	4 cut(s)	125, 205, 469, 1128
AsuC2I	CCSGG	5 cut(s)	472, 473, 686, 687, 701
AsuHPI	GGTGA	7 cut(s)	238, 283, 715, 1304, 1714, 1819, 1827
AsuII	TTCGAA	2 cut(s)	395, 1053
AvaI	CYCGRG	2 cut(s)	471, 685
AvaII	GGWCC	2 cut(s)	125, 1128
AvrII	CCTAGG	1 cut(s)	920
BamHI	GGATCC	2 cut(s)	1117, 1431
BanII	GRGCYC	2 cut(s)	13, 692
BarI	GAAGNNNNNNTAC	2 cut(s)	170, 202
BbsI	GAAGAC	2 cut(s)	440, 1502
Bbv12I	GWGCWC	1 cut(s)	1111
BbvCI	CCTCAGC	1 cut(s)	663
BbvI	GCAGC	2 cut(s)	647, 945
BccI	CCATC	7 cut(s)	872, 1055, 1186, 1289, 1316, 1415, 1484
BceAI	ACGGC	1 cut(s)	1149
BcgI	CGANNNNNNTGC	2 cut(s)	1802, 1836
BciT130I	CCWGG	3 cut(s)	86, 1380, 1436
BcnI	CCSGG	5 cut(s)	472, 473, 686, 687, 701
BcoDI	GTCTC	2 cut(s)	798, 1320
BfaI	CTAG	2 cut(s)	921, 1284
BfmI	CTRYAG	1 cut(s)	316
BfoI	RGCGCY	1 cut(s)	1651
BglII	AGATCT	1 cut(s)	25
BisI	GCNGC	4 cut(s)	19, 636, 744, 959
BlnI	CCTAGG	1 cut(s)	920
BlsI	GCNGC	4 cut(s)	20, 637, 745, 960
BmcAI	AGTACT	1 cut(s)	1288
Bme1390I	CCNGG	8 cut(s)	86, 472, 473, 686, 687, 701, 1380, 1436
Bme18I	GGWCC	2 cut(s)	125, 1128
BmeT110I	CYCGRG	2 cut(s)	471, 685
BmgBI	CACGTC	1 cut(s)	154
BmgT120I	GGNCC	4 cut(s)	125, 205, 469, 1128
BmiI	GGNNCC	6 cut(s)	127, 207, 1119, 1129, 1238, 1433
BmrFI	CCNGG	8 cut(s)	86, 472, 473, 686, 687, 701, 1380, 1436
BmrI	ACTGGG	1 cut(s)	1606
BmsI	GCATC	3 cut(s)	414, 649, 1255
BmuI	ACTGGG	1 cut(s)	1606
BpiI	GAAGAC	2 cut(s)	440, 1502
BpmI	CTGGAG	1 cut(s)	1240
Bpu10I	CCTNAGC	1 cut(s)	663
Bpu14I	TTCGAA	2 cut(s)	395, 1053
BpuEI	CTTGAG	4 cut(s)	50, 152, 167, 742
BpuMI	CCSGG	5 cut(s)	472, 473, 686, 687, 701
BsaAI	YACGTR	1 cut(s)	1416
BsaBI	GATNNNNATC	1 cut(s)	1463
BsaHI	GRCGYC	3 cut(s)	90, 140, 197
BsaI	GGTCTC	1 cut(s)	1320
BsaWI	WCCGGW	1 cut(s)	1332
BsaXI	ACNNNNNCTCC	2 cut(s)	436, 466
Bsc4I	CCNNNNNNNGG	4 cut(s)	921, 1385, 1545, 1735
Bse118I	RCCGGY	1 cut(s)	136
Bse1I	ACTGG	5 cut(s)	1030, 1149, 1294, 1612, 1893
Bse8I	GATNNNNATC	1 cut(s)	1463
BseBI	CCWGG	3 cut(s)	86, 1380, 1436
BseJI	GATNNNNATC	1 cut(s)	1463
BseLI	CCNNNNNNNGG	4 cut(s)	921, 1385, 1545, 1735
BseMII	CTCAG	5 cut(s)	57, 411, 654, 668, 1032
BseNI	ACTGG	5 cut(s)	1030, 1149, 1294, 1612, 1893
BseRI	GAGGAG	4 cut(s)	368, 371, 680, 743
BseXI	GCAGC	2 cut(s)	647, 945
BseYI	CCCAGC	1 cut(s)	1514
Bsh1236I	CGCG	3 cut(s)	21, 123, 191
BshFI	GGCC	4 cut(s)	161, 206, 470, 1383
BsiHKAI	GWGCWC	1 cut(s)	1111
BsiHKCI	CYCGRG	2 cut(s)	471, 685
BsiSI	CCGG	5 cut(s)	137, 472, 686, 701, 1333
BsiWI	CGTACG	1 cut(s)	1416
BslFI	GGGAC	2 cut(s)	1078, 1155
BslI	CCNNNNNNNGG	4 cut(s)	921, 1385, 1545, 1735
BsmAI	GTCTC	2 cut(s)	798, 1320
BsmFI	GGGAC	2 cut(s)	1078, 1155
BsmI	GAATGC	1 cut(s)	813
BsnI	GGCC	4 cut(s)	161, 206, 470, 1383
Bso31I	GGTCTC	1 cut(s)	1320
BsoBI	CYCGRG	2 cut(s)	471, 685
Bsp119I	TTCGAA	2 cut(s)	395, 1053
Bsp1286I	GDGCHC	3 cut(s)	13, 692, 1111
Bsp143I	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
BspACI	CCGC	7 cut(s)	19, 116, 123, 224, 638, 743, 1539
BspANI	GGCC	4 cut(s)	161, 206, 470, 1383
BspCNI	CTCAG	5 cut(s)	56, 412, 655, 669, 1033
BspFNI	CGCG	3 cut(s)	21, 123, 191
BspHI	TCATGA	1 cut(s)	963
BspLI	GGNNCC	6 cut(s)	127, 207, 1119, 1129, 1238, 1433
BspPI	GGATC	8 cut(s)	1112, 1125, 1209, 1324, 1426, 1439, 1453, 1541
BspQI	GCTCTTC	1 cut(s)	48
BspT104I	TTCGAA	2 cut(s)	395, 1053
BspTNI	GGTCTC	1 cut(s)	1320
BsrBI	CCGCTC	1 cut(s)	1541
BsrFI	RCCGGY	1 cut(s)	136
BsrI	ACTGG	5 cut(s)	1030, 1149, 1294, 1612, 1893
BssAI	RCCGGY	1 cut(s)	136
BssMI	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
BssNAI	GTATAC	2 cut(s)	534, 758
BssNI	GRCGYC	3 cut(s)	90, 140, 197
BssT1I	CCWWGG	4 cut(s)	920, 1240, 1384, 1544
Bst1107I	GTATAC	2 cut(s)	534, 758
Bst2UI	CCWGG	3 cut(s)	86, 1380, 1436
Bst4CI	ACNGT	3 cut(s)	836, 1113, 1666
Bst6I	CTCTTC	3 cut(s)	48, 69, 1742
BstACI	GRCGYC	3 cut(s)	90, 140, 197
BstAPI	GCANNNNNTGC	1 cut(s)	776
BstBAI	YACGTR	1 cut(s)	1416
BstBI	TTCGAA	2 cut(s)	395, 1053
BstC8I	GCNNGC	6 cut(s)	138, 204, 910, 986, 1362, 1585
BstDEI	CTNAG	6 cut(s)	43, 420, 528, 663, 677, 1041
BstEII	GGTNACC	1 cut(s)	274
BstENI	CCTNNNNNAGG	1 cut(s)	1733
BstFNI	CGCG	3 cut(s)	21, 123, 191
BstH2I	RGCGCY	1 cut(s)	1651
BstHHI	GCGC	2 cut(s)	123, 1650
BstKTI	GATC	8 cut(s)	28, 113, 1120, 1204, 1332, 1434, 1461, 1536
BstMAI	GTCTC	2 cut(s)	798, 1320
BstMBI	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
BstMWI	GCNNNNNNNGC	3 cut(s)	776, 1370, 1884
BstNI	CCWGG	3 cut(s)	86, 1380, 1436
BstNSI	RCATGY	1 cut(s)	1406
BstPI	GGTNACC	1 cut(s)	274
BstSCI	CCNGG	8 cut(s)	84, 470, 471, 684, 685, 699, 1378, 1434
BstSFI	CTRYAG	1 cut(s)	316
BstSNI	TACGTA	1 cut(s)	1416
BstUI	CGCG	3 cut(s)	21, 123, 191
BstV1I	GCAGC	2 cut(s)	647, 945
BstV2I	GAAGAC	2 cut(s)	440, 1502
BstX2I	RGATCY	6 cut(s)	25, 1117, 1201, 1329, 1431, 1533
BstXI	CCANNNNNNTGG	1 cut(s)	1138
BstYI	RGATCY	6 cut(s)	25, 1117, 1201, 1329, 1431, 1533
BstZ17I	GTATAC	2 cut(s)	534, 758
BsuRI	GGCC	4 cut(s)	161, 206, 470, 1383
BtrI	CACGTC	1 cut(s)	154
BtsIMutI	CAGTG	1 cut(s)	1280
Cac8I	GCNNGC	6 cut(s)	138, 204, 910, 986, 1362, 1585
CciI	TCATGA	1 cut(s)	963
CfoI	GCGC	2 cut(s)	123, 1650
Cfr10I	RCCGGY	1 cut(s)	136
Cfr13I	GGNCC	4 cut(s)	125, 205, 469, 1128
Cfr9I	CCCGGG	2 cut(s)	471, 685
CseI	GACGC	4 cut(s)	98, 129, 180, 440
Csp6I	GTAC	4 cut(s)	187, 1287, 1417, 1470
CspCI	CAANNNNNGTGG	2 cut(s)	1290, 1325
CviAII	CATG	9 cut(s)	242, 749, 839, 964, 1403, 1474, 1620, 1718, 1807
CviQI	GTAC	4 cut(s)	187, 1287, 1417, 1470
DdeI	CTNAG	6 cut(s)	43, 420, 528, 663, 677, 1041
DpnI	GATC	8 cut(s)	27, 112, 1119, 1203, 1331, 1433, 1460, 1535
DpnII	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
Eam1104I	CTCTTC	3 cut(s)	48, 69, 1742
EarI	CTCTTC	3 cut(s)	48, 69, 1742
EciI	GGCGGA	1 cut(s)	131
Eco105I	TACGTA	1 cut(s)	1416
Eco130I	CCWWGG	4 cut(s)	920, 1240, 1384, 1544
Eco24I	GRGCYC	2 cut(s)	13, 692
Eco31I	GGTCTC	1 cut(s)	1320
Eco47I	GGWCC	2 cut(s)	125, 1128
Eco57I	CTGAAG	4 cut(s)	1107, 1796, 1860, 1867
Eco88I	CYCGRG	2 cut(s)	471, 685
Eco91I	GGTNACC	1 cut(s)	274
EcoNI	CCTNNNNNAGG	1 cut(s)	1733
EcoO109I	RGGNCCY	1 cut(s)	205
EcoO65I	GGTNACC	1 cut(s)	274
EcoRII	CCWGG	3 cut(s)	84, 1378, 1434
EcoT14I	CCWWGG	4 cut(s)	920, 1240, 1384, 1544
EcoT38I	GRGCYC	2 cut(s)	13, 692
ErhI	CCWWGG	4 cut(s)	920, 1240, 1384, 1544
FaeI	CATG	9 cut(s)	245, 752, 842, 967, 1406, 1477, 1623, 1721, 1810
FalI	AAGNNNNNCTT	4 cut(s)	1493, 1525, 1833, 1865
FaqI	GGGAC	2 cut(s)	1078, 1155
FatI	CATG	9 cut(s)	241, 748, 838, 963, 1402, 1473, 1619, 1717, 1806
FblI	GTMKAC	3 cut(s)	194, 533, 757
Fnu4HI	GCNGC	4 cut(s)	19, 636, 744, 959
FriOI	GRGCYC	2 cut(s)	13, 692
Fsp4HI	GCNGC	4 cut(s)	19, 636, 744, 959
FspBI	CTAG	2 cut(s)	921, 1284
GlaI	GCGC	2 cut(s)	122, 1649
GluI	GCNGC	4 cut(s)	19, 636, 744, 959
GsaI	CCCAGC	1 cut(s)	1518
GsuI	CTGGAG	1 cut(s)	1240
HaeII	RGCGCY	1 cut(s)	1651
HaeIII	GGCC	4 cut(s)	161, 206, 470, 1383
HapII	CCGG	5 cut(s)	137, 472, 686, 701, 1333
HgaI	GACGC	4 cut(s)	98, 129, 180, 440
HhaI	GCGC	2 cut(s)	123, 1650
Hin1I	GRCGYC	3 cut(s)	90, 140, 197
Hin1II	CATG	9 cut(s)	245, 752, 842, 967, 1406, 1477, 1623, 1721, 1810
Hin6I	GCGC	2 cut(s)	121, 1648
HinP1I	GCGC	2 cut(s)	121, 1648
HincII	GTYRAC	1 cut(s)	195
HindII	GTYRAC	1 cut(s)	195
HpaII	CCGG	5 cut(s)	137, 472, 686, 701, 1333
HphI	GGTGA	7 cut(s)	238, 283, 715, 1304, 1714, 1819, 1827
Hpy166II	GTNNAC	6 cut(s)	195, 534, 674, 758, 1131, 1479
Hpy188I	TCNGA	4 cut(s)	46, 108, 216, 283
Hpy188III	TCNNGA	9 cut(s)	29, 716, 964, 1199, 1257, 1319, 1568, 1736, 1774
Hpy8I	GTNNAC	6 cut(s)	195, 534, 674, 758, 1131, 1479
Hpy99I	CGWCG	5 cut(s)	145, 196, 199, 202, 456
HpyAV	CCTTC	9 cut(s)	62, 598, 919, 934, 1075, 1131, 1699, 1771, 1891
HpyCH4III	ACNGT	3 cut(s)	836, 1113, 1666
HpyCH4IV	ACGT	4 cut(s)	153, 197, 437, 1415
HpyCH4V	TGCA	9 cut(s)	427, 695, 779, 1091, 1208, 1661, 1810, 1823, 1859
HpyF10VI	GCNNNNNNNGC	3 cut(s)	776, 1370, 1884
HpyF3I	CTNAG	6 cut(s)	43, 420, 528, 663, 677, 1041
HpySE526I	ACGT	4 cut(s)	153, 197, 437, 1415
Hsp92I	GRCGYC	3 cut(s)	90, 140, 197
Hsp92II	CATG	9 cut(s)	245, 752, 842, 967, 1406, 1477, 1623, 1721, 1810
HspAI	GCGC	2 cut(s)	121, 1648
KroI	GCCGGC	1 cut(s)	136
KroNI	GCCGGC	1 cut(s)	138
Kzo9I	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
LguI	GCTCTTC	1 cut(s)	48
LmnI	GCTCC	8 cut(s)	118, 448, 577, 917, 1106, 1546, 1645, 1883
Lsp1109I	GCAGC	2 cut(s)	647, 945
LweI	GCATC	3 cut(s)	414, 649, 1255
MaeI	CTAG	2 cut(s)	921, 1284
MaeII	ACGT	4 cut(s)	153, 197, 437, 1415
MaeIII	GTNAC	6 cut(s)	274, 1036, 1411, 1624, 1713, 1825
MalI	GATC	8 cut(s)	27, 112, 1119, 1203, 1331, 1433, 1460, 1535
MbiI	CCGCTC	1 cut(s)	1541
MboI	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
MfeI	CAATTG	2 cut(s)	1231, 1302
MflI	RGATCY	6 cut(s)	25, 1117, 1201, 1329, 1431, 1533
MhlI	GDGCHC	3 cut(s)	13, 692, 1111
MluCI	AATT	8 cut(s)	829, 868, 901, 1231, 1302, 1348, 1690, 1817
MluI	ACGCGT	1 cut(s)	189
MlyI	GAGTC	5 cut(s)	35, 486, 800, 976, 1826
MmeI	TCCRAC	4 cut(s)	226, 1095, 1648, 1720
MreI	CGCCGGCG	1 cut(s)	136
MroNI	GCCGGC	1 cut(s)	136
MroXI	GAANNNNTTC	1 cut(s)	102
MseI	TTAA	3 cut(s)	408, 591, 825
MslI	CAYNNNNRTG	2 cut(s)	1407, 1720
MspA1I	CMGCKG	1 cut(s)	638
MspI	CCGG	5 cut(s)	137, 472, 686, 701, 1333
MspR9I	CCNGG	8 cut(s)	86, 472, 473, 686, 687, 701, 1380, 1436
MunI	CAATTG	2 cut(s)	1231, 1302
Mva1269I	GAATGC	1 cut(s)	813
MvaI	CCWGG	3 cut(s)	86, 1380, 1436
MvnI	CGCG	3 cut(s)	21, 123, 191
MwoI	GCNNNNNNNGC	3 cut(s)	776, 1370, 1884
NaeI	GCCGGC	1 cut(s)	138
NciI	CCSGG	5 cut(s)	472, 473, 686, 687, 701
NdeII	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
NgoMIV	GCCGGC	1 cut(s)	136
NlaIII	CATG	9 cut(s)	245, 752, 842, 967, 1406, 1477, 1623, 1721, 1810
NlaIV	GGNNCC	6 cut(s)	127, 207, 1119, 1129, 1238, 1433
NmeAIII	GCCGAG	1 cut(s)	118
NmuCI	GTSAC	4 cut(s)	1036, 1624, 1713, 1825
NspI	RCATGY	1 cut(s)	1406
NspV	TTCGAA	2 cut(s)	395, 1053
OliI	CACNNNNGTG	1 cut(s)	1720
PagI	TCATGA	1 cut(s)	963
PciSI	GCTCTTC	1 cut(s)	48
PctI	GAATGC	1 cut(s)	813
PdiI	GCCGGC	1 cut(s)	138
PdmI	GAANNNNTTC	1 cut(s)	102
PfeI	GAWTC	7 cut(s)	103, 368, 644, 712, 1561, 1571, 1784
Pfl23II	CGTACG	1 cut(s)	1416
PfoI	TCCNGGA	1 cut(s)	84
PkrI	GCNGC	4 cut(s)	20, 637, 745, 960
PleI	GAGTC	5 cut(s)	35, 485, 800, 975, 1826
PpsI	GAGTC	5 cut(s)	35, 485, 800, 975, 1826
Ppu21I	YACGTR	1 cut(s)	1416
Psp6I	CCWGG	3 cut(s)	84, 1378, 1434
PspEI	GGTNACC	1 cut(s)	274
PspFI	CCCAGC	1 cut(s)	1514
PspGI	CCWGG	3 cut(s)	84, 1378, 1434
PspLI	CGTACG	1 cut(s)	1416
PspN4I	GGNNCC	6 cut(s)	127, 207, 1119, 1129, 1238, 1433
PspPI	GGNCC	4 cut(s)	125, 205, 469, 1128
PsuI	RGATCY	6 cut(s)	25, 1117, 1201, 1329, 1431, 1533
RsaI	GTAC	4 cut(s)	188, 1288, 1418, 1471
RsaNI	GTAC	4 cut(s)	187, 1287, 1417, 1470
RseI	CAYNNNNRTG	2 cut(s)	1407, 1720
SalI	GTCGAC	1 cut(s)	193
SapI	GCTCTTC	1 cut(s)	48
SaqAI	TTAA	3 cut(s)	408, 591, 825
SatI	GCNGC	4 cut(s)	19, 636, 744, 959
Sau3AI	GATC	8 cut(s)	25, 110, 1117, 1201, 1329, 1431, 1458, 1533
Sau96I	GGNCC	4 cut(s)	125, 205, 469, 1128
ScaI	AGTACT	1 cut(s)	1288
SchI	GAGTC	5 cut(s)	35, 486, 800, 976, 1826
ScrFI	CCNGG	8 cut(s)	86, 472, 473, 686, 687, 701, 1380, 1436
SduI	GDGCHC	3 cut(s)	13, 692, 1111
SfaNI	GCATC	3 cut(s)	414, 649, 1255
SfcI	CTRYAG	1 cut(s)	316
SfuI	TTCGAA	2 cut(s)	395, 1053
SgrAI	CRCCGGYG	1 cut(s)	136
SgrDI	CGTCGACG	1 cut(s)	193
SinI	GGWCC	2 cut(s)	125, 1128
SmaI	CCCGGG	2 cut(s)	473, 687
SmiMI	CAYNNNNRTG	2 cut(s)	1407, 1720
SmlI	CTYRAG	4 cut(s)	29, 167, 182, 721
SmoI	CTYRAG	4 cut(s)	29, 167, 182, 721
SnaBI	TACGTA	1 cut(s)	1416
SrfI	GCCCGGGC	1 cut(s)	687
Sse9I	AATT	8 cut(s)	829, 868, 901, 1231, 1302, 1348, 1690, 1817
SsiI	CCGC	7 cut(s)	19, 116, 123, 224, 638, 743, 1539
SspMI	CTAG	2 cut(s)	921, 1284
StyD4I	CCNGG	8 cut(s)	84, 470, 471, 684, 685, 699, 1378, 1434
StyI	CCWWGG	4 cut(s)	920, 1240, 1384, 1544
TaaI	ACNGT	3 cut(s)	836, 1113, 1666
TaiI	ACGT	4 cut(s)	156, 200, 440, 1418
TaqI	TCGA	3 cut(s)	194, 395, 1053
TasI	AATT	8 cut(s)	829, 868, 901, 1231, 1302, 1348, 1690, 1817
TatI	WGTACW	1 cut(s)	1286
TauI	GCSGC	2 cut(s)	21, 746
TfiI	GAWTC	7 cut(s)	103, 368, 644, 712, 1561, 1571, 1784
Tru1I	TTAA	3 cut(s)	408, 591, 825
Tru9I	TTAA	3 cut(s)	408, 591, 825
TscAI	CASTG	1 cut(s)	1280
TseFI	GTSAC	4 cut(s)	1036, 1624, 1713, 1825
TseI	GCWGC	2 cut(s)	635, 958
Tsp45I	GTSAC	4 cut(s)	1036, 1624, 1713, 1825
TspDTI	ATGAA	9 cut(s)	230, 446, 503, 953, 989, 995, 1094, 1608, 1795
TspGWI	ACGGA	1 cut(s)	590
TspMI	CCCGGG	2 cut(s)	471, 685
TspRI	CASTG	1 cut(s)	1280
VpaK11BI	GGWCC	2 cut(s)	125, 1128
XagI	CCTNNNNNAGG	1 cut(s)	1733
XapI	RAATTY	3 cut(s)	901, 1690, 1817
XceI	RCATGY	1 cut(s)	1406
XmaI	CCCGGG	2 cut(s)	471, 685
XmaJI	CCTAGG	1 cut(s)	920
XmiI	GTMKAC	3 cut(s)	194, 533, 757
XmnI	GAANNNNTTC	1 cut(s)	102
XspI	CTAG	2 cut(s)	921, 1284
ZraI	GACGTC	1 cut(s)	198
ZrmI	AGTACT	1 cut(s)	1288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.