Rorug06G0497300

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
61348696 .. 61349412
717 bp
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UTR
Exon/CDS
Intron
Rorug06G0497300.1

Sequence Viewer

Length: 222 bp
ATGACCAATGTCGACAAAATTGGCATGGGCCCATTGGGCTGGTGTATTGGAGCCCATTTTGGATTAGCGGATAAAAGGAATATCCCTTCTCCTTCTATTGTAACTGACCCCAAGCCAAAACCTTCACAGTTCACCCTCTCTCTCTCCGTCTCTCATCAGACGCATCATCCTTCATCACAGCAGCTTCCAGAATTCTCTGCTCATCTTACACGGTGTATTTGA

Protein Analysis

73

Amino Acids

7.95

Weight (kDa)

8.81

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 12
AciI CCGC 1 cut(s) 68
AcsI RAATTY 1 cut(s) 191
AluBI AGCT 1 cut(s) 184
AluI AGCT 1 cut(s) 184
Alw26I GTCTC 1 cut(s) 154
AoxI GGCC 1 cut(s) 28
ApaI GGGCCC 1 cut(s) 32
ApeKI GCWGC 1 cut(s) 181
ApoI RAATTY 1 cut(s) 191
AspS9I GGNCC 2 cut(s) 28, 29
AsuHPI GGTGA 1 cut(s) 124
BaeGI GKGCMC 1 cut(s) 32
BanII GRGCYC 2 cut(s) 32, 55
BbvI GCAGC 1 cut(s) 193
BcoDI GTCTC 1 cut(s) 154
BglI GCCNNNNNGGC 1 cut(s) 36
BisI GCNGC 1 cut(s) 182
BlsI GCNGC 1 cut(s) 183
BmgT120I GGNCC 2 cut(s) 28, 29
BmiI GGNNCC 2 cut(s) 30, 52
BmsI GCATC 1 cut(s) 172
BoxI GACNNNNGTC 1 cut(s) 8
BseGI GGATG 1 cut(s) 166
BseSI GKGCMC 1 cut(s) 32
BseXI GCAGC 1 cut(s) 193
BshFI GGCC 1 cut(s) 30
BsmAI GTCTC 1 cut(s) 154
BsmBI CGTCTC 1 cut(s) 154
BsnI GGCC 1 cut(s) 30
Bsp120I GGGCCC 1 cut(s) 28
Bsp1286I GDGCHC 2 cut(s) 32, 55
BspACI CCGC 1 cut(s) 68
BspANI GGCC 1 cut(s) 30
BspLI GGNNCC 2 cut(s) 30, 52
Bst4CI ACNGT 2 cut(s) 129, 213
BstF5I GGATG 1 cut(s) 166
BstMAI GTCTC 1 cut(s) 154
BstMWI GCNNNNNNNGC 1 cut(s) 36
BstPAI GACNNNNGTC 1 cut(s) 8
BstSLI GKGCMC 1 cut(s) 32
BstV1I GCAGC 1 cut(s) 193
BstXI CCANNNNNNTGG 1 cut(s) 39
BsuRI GGCC 1 cut(s) 30
BtsCI GGATG 1 cut(s) 166
Cfr13I GGNCC 2 cut(s) 28, 29
CseI GACGC 1 cut(s) 169
CviAII CATG 1 cut(s) 25
CviJI RGCY 5 cut(s) 30, 39, 53, 115, 184
CviKI_1 RGCY 5 cut(s) 30, 39, 53, 115, 184
Eco24I GRGCYC 2 cut(s) 32, 55
EcoRI GAATTC 1 cut(s) 191
EcoT38I GRGCYC 2 cut(s) 32, 55
Esp3I CGTCTC 1 cut(s) 154
FaeI CATG 1 cut(s) 28
FaiI YATR 1 cut(s) 26
FatI CATG 1 cut(s) 24
FblI GTMKAC 1 cut(s) 12
Fnu4HI GCNGC 1 cut(s) 182
FokI GGATG 1 cut(s) 153
FriOI GRGCYC 2 cut(s) 32, 55
Fsp4HI GCNGC 1 cut(s) 182
GluI GCNGC 1 cut(s) 182
HaeIII GGCC 1 cut(s) 30
HgaI GACGC 1 cut(s) 169
Hin1II CATG 1 cut(s) 28
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HphI GGTGA 1 cut(s) 124
Hpy166II GTNNAC 2 cut(s) 13, 132
Hpy188I TCNGA 1 cut(s) 159
Hpy188III TCNNGA 1 cut(s) 188
Hpy8I GTNNAC 2 cut(s) 13, 132
HpyAV CCTTC 4 cut(s) 96, 102, 132, 180
HpyCH4III ACNGT 2 cut(s) 129, 213
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
Hsp92II CATG 1 cut(s) 28
LmnI GCTCC 1 cut(s) 50
LpnPI CCDG 2 cut(s) 25, 201
Lsp1109I GCAGC 1 cut(s) 193
LweI GCATC 1 cut(s) 172
MaeIII GTNAC 1 cut(s) 100
MhlI GDGCHC 2 cut(s) 32, 55
MluCI AATT 2 cut(s) 18, 191
MnlI CCTC 1 cut(s) 146
MwoI GCNNNNNNNGC 1 cut(s) 36
NlaIII CATG 1 cut(s) 28
NlaIV GGNNCC 2 cut(s) 30, 52
PkrI GCNGC 1 cut(s) 183
PshAI GACNNNNGTC 1 cut(s) 8
PspN4I GGNNCC 2 cut(s) 30, 52
PspOMI GGGCCC 1 cut(s) 28
PspPI GGNCC 2 cut(s) 28, 29
SalI GTCGAC 1 cut(s) 11
SatI GCNGC 1 cut(s) 182
Sau96I GGNCC 2 cut(s) 28, 29
SduI GDGCHC 2 cut(s) 32, 55
SetI ASST 2 cut(s) 124, 186
SfaNI GCATC 1 cut(s) 172
SgeI CNNG 4 cut(s) 37, 52, 124, 200
Sse9I AATT 2 cut(s) 18, 191
SsiI CCGC 1 cut(s) 68
TaaI ACNGT 2 cut(s) 129, 213
TaqI TCGA 1 cut(s) 12
TasI AATT 2 cut(s) 18, 191
TseI GCWGC 1 cut(s) 181
TspDTI ATGAA 1 cut(s) 162
TspGWI ACGGA 1 cut(s) 136
XapI RAATTY 1 cut(s) 191
XmiI GTMKAC 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.