RING-H2 finger protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28040 AT2G25410 AT2G46493 AT2G46494 AT2G46495 AT2G46495 AT5G36001 AT5G36001 |
| fragaria_vesca | FvH4_7g16350 |
| malus_domestica | MD07G1148900.v1.1 |
| prunus_persica | Prupe.2G187400_v2.0.a1 |
| pyrus_communis | pycom07g14790 |
| rosa_chinensis | RchiOBHm_Chr1g0359361 |
| rosa_laevigata | RLG00000027876 |
| rosa_multiflora | Rmu_ssc0000358.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00297050 |
| rosa_rugosa | Rorug01G0270500 |
| rosa_samantha | Rh1AG283900 Rh1AG284000 Rh1BG250100 Rh1CG268000 Rh1DG279000 |
| rosa_wichuraiana | Rw1G025210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 101 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 134 |
| AcsI | RAATTY | 2 cut(s) | 140, 382 |
| AfaI | GTAC | 3 cut(s) | 514, 570, 598 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 134, 434, 524 |
| AgsI | TTSAA | 2 cut(s) | 182, 387 |
| AjnI | CCWGG | 2 cut(s) | 76, 505 |
| AluBI | AGCT | 1 cut(s) | 285 |
| AluI | AGCT | 1 cut(s) | 285 |
| Alw26I | GTCTC | 1 cut(s) | 115 |
| ApeKI | GCWGC | 2 cut(s) | 254, 285 |
| ApoI | RAATTY | 2 cut(s) | 140, 382 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 374, 406 |
| AsuHPI | GGTGA | 2 cut(s) | 307, 539 |
| BbvCI | CCTCAGC | 2 cut(s) | 281, 371 |
| BbvI | GCAGC | 2 cut(s) | 241, 272 |
| BccI | CCATC | 1 cut(s) | 449 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 391, 425 |
| BciT130I | CCWGG | 2 cut(s) | 78, 507 |
| BclI | TGATCA | 1 cut(s) | 613 |
| BcoDI | GTCTC | 1 cut(s) | 115 |
| BfaI | CTAG | 2 cut(s) | 195, 561 |
| BfuAI | ACCTGC | 1 cut(s) | 101 |
| BisI | GCNGC | 2 cut(s) | 255, 286 |
| BlsI | GCNGC | 2 cut(s) | 256, 287 |
| BmcAI | AGTACT | 1 cut(s) | 570 |
| Bme1390I | CCNGG | 2 cut(s) | 78, 507 |
| BmiI | GGNNCC | 1 cut(s) | 32 |
| BmrFI | CCNGG | 2 cut(s) | 78, 507 |
| BmrI | ACTGGG | 1 cut(s) | 620 |
| BmuI | ACTGGG | 1 cut(s) | 620 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| Bpu10I | CCTNAGC | 2 cut(s) | 281, 371 |
| Bsa29I | ATCGAT | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 1 cut(s) | 76 |
| BsaWI | WCCGGW | 2 cut(s) | 27, 427 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 134, 434, 524 |
| Bse118I | RCCGGY | 1 cut(s) | 14 |
| Bse1I | ACTGG | 2 cut(s) | 422, 626 |
| BseBI | CCWGG | 2 cut(s) | 78, 507 |
| BseCI | ATCGAT | 1 cut(s) | 159 |
| BseDI | CCNNGG | 1 cut(s) | 76 |
| BseGI | GGATG | 1 cut(s) | 460 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 134, 434, 524 |
| BseMII | CTCAG | 6 cut(s) | 110, 295, 346, 363, 385, 441 |
| BseNI | ACTGG | 2 cut(s) | 422, 626 |
| BseXI | GCAGC | 2 cut(s) | 241, 272 |
| BshVI | ATCGAT | 1 cut(s) | 159 |
| BsiSI | CCGG | 3 cut(s) | 15, 28, 428 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 134, 434, 524 |
| BsmAI | GTCTC | 1 cut(s) | 115 |
| Bsp143I | GATC | 2 cut(s) | 405, 613 |
| BspCNI | CTCAG | 6 cut(s) | 111, 294, 345, 362, 384, 442 |
| BspDI | ATCGAT | 1 cut(s) | 159 |
| BspLI | GGNNCC | 1 cut(s) | 32 |
| BspMI | ACCTGC | 1 cut(s) | 101 |
| BsrFI | RCCGGY | 1 cut(s) | 14 |
| BsrI | ACTGG | 2 cut(s) | 422, 626 |
| BssAI | RCCGGY | 1 cut(s) | 14 |
| BssECI | CCNNGG | 1 cut(s) | 76 |
| BssMI | GATC | 2 cut(s) | 405, 613 |
| Bst2UI | CCWGG | 2 cut(s) | 78, 507 |
| Bst4CI | ACNGT | 2 cut(s) | 68, 115 |
| BstDEI | CTNAG | 8 cut(s) | 119, 281, 332, 349, 371, 393, 450, 485 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 522 |
| BstF5I | GGATG | 1 cut(s) | 460 |
| BstKTI | GATC | 2 cut(s) | 408, 616 |
| BstMAI | GTCTC | 1 cut(s) | 115 |
| BstMBI | GATC | 2 cut(s) | 405, 613 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 15, 543, 552, 561 |
| BstNI | CCWGG | 2 cut(s) | 78, 507 |
| BstSCI | CCNGG | 2 cut(s) | 76, 505 |
| BstV1I | GCAGC | 2 cut(s) | 241, 272 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 572 |
| Bsu15I | ATCGAT | 1 cut(s) | 159 |
| BsuTUI | ATCGAT | 1 cut(s) | 159 |
| BtgZI | GCGATG | 1 cut(s) | 394 |
| BtsCI | GGATG | 1 cut(s) | 460 |
| BveI | ACCTGC | 1 cut(s) | 101 |
| Cfr10I | RCCGGY | 1 cut(s) | 14 |
| ClaI | ATCGAT | 1 cut(s) | 159 |
| Csp6I | GTAC | 3 cut(s) | 513, 569, 597 |
| CviAII | CATG | 1 cut(s) | 495 |
| CviQI | GTAC | 3 cut(s) | 513, 569, 597 |
| DdeI | CTNAG | 8 cut(s) | 119, 281, 332, 349, 371, 393, 450, 485 |
| DpnI | GATC | 2 cut(s) | 407, 615 |
| DpnII | GATC | 2 cut(s) | 405, 613 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 522 |
| EcoRII | CCWGG | 2 cut(s) | 76, 505 |
| FaeI | CATG | 1 cut(s) | 498 |
| FaiI | YATR | 5 cut(s) | 110, 165, 189, 496, 501 |
| FatI | CATG | 1 cut(s) | 494 |
| FbaI | TGATCA | 1 cut(s) | 613 |
| Fnu4HI | GCNGC | 2 cut(s) | 255, 286 |
| FokI | GGATG | 1 cut(s) | 467 |
| Fsp4HI | GCNGC | 2 cut(s) | 255, 286 |
| FspBI | CTAG | 2 cut(s) | 195, 561 |
| GluI | GCNGC | 2 cut(s) | 255, 286 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HapII | CCGG | 3 cut(s) | 15, 28, 428 |
| Hin1II | CATG | 1 cut(s) | 498 |
| HinfI | GANTC | 5 cut(s) | 178, 305, 446, 459, 476 |
| HpaII | CCGG | 3 cut(s) | 15, 28, 428 |
| HphI | GGTGA | 2 cut(s) | 307, 539 |
| Hpy166II | GTNNAC | 1 cut(s) | 315 |
| Hpy188I | TCNGA | 5 cut(s) | 152, 222, 267, 451, 481 |
| Hpy188III | TCNNGA | 2 cut(s) | 118, 135 |
| Hpy8I | GTNNAC | 1 cut(s) | 315 |
| HpyAV | CCTTC | 5 cut(s) | 215, 286, 375, 518, 524 |
| HpyCH4III | ACNGT | 2 cut(s) | 68, 115 |
| HpyCH4V | TGCA | 2 cut(s) | 96, 402 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 15, 543, 552, 561 |
| HpyF3I | CTNAG | 8 cut(s) | 119, 281, 332, 349, 371, 393, 450, 485 |
| Hsp92II | CATG | 1 cut(s) | 498 |
| Ksp22I | TGATCA | 1 cut(s) | 613 |
| Kzo9I | GATC | 2 cut(s) | 405, 613 |
| Lsp1109I | GCAGC | 2 cut(s) | 241, 272 |
| MaeI | CTAG | 2 cut(s) | 195, 561 |
| MaeIII | GTNAC | 2 cut(s) | 166, 335 |
| MalI | GATC | 2 cut(s) | 407, 615 |
| MboI | GATC | 2 cut(s) | 405, 613 |
| MluCI | AATT | 3 cut(s) | 140, 382, 586 |
| MlyI | GAGTC | 2 cut(s) | 314, 455 |
| MnlI | CCTC | 7 cut(s) | 236, 290, 341, 358, 380, 386, 445 |
| MspA1I | CMGCKG | 1 cut(s) | 285 |
| MspI | CCGG | 3 cut(s) | 15, 28, 428 |
| MspR9I | CCNGG | 2 cut(s) | 78, 507 |
| MvaI | CCWGG | 2 cut(s) | 78, 507 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 15, 543, 552, 561 |
| NdeII | GATC | 2 cut(s) | 405, 613 |
| NlaIII | CATG | 1 cut(s) | 498 |
| NlaIV | GGNNCC | 1 cut(s) | 32 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PfeI | GAWTC | 3 cut(s) | 178, 459, 476 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 134 |
| PkrI | GCNGC | 2 cut(s) | 256, 287 |
| PleI | GAGTC | 2 cut(s) | 313, 454 |
| PpsI | GAGTC | 2 cut(s) | 313, 454 |
| Psp6I | CCWGG | 2 cut(s) | 76, 505 |
| PspGI | CCWGG | 2 cut(s) | 76, 505 |
| PspN4I | GGNNCC | 1 cut(s) | 32 |
| PvuII | CAGCTG | 1 cut(s) | 285 |
| RsaI | GTAC | 3 cut(s) | 514, 570, 598 |
| RsaNI | GTAC | 3 cut(s) | 513, 569, 597 |
| SatI | GCNGC | 2 cut(s) | 255, 286 |
| Sau3AI | GATC | 2 cut(s) | 405, 613 |
| ScaI | AGTACT | 1 cut(s) | 570 |
| SchI | GAGTC | 2 cut(s) | 314, 455 |
| ScrFI | CCNGG | 2 cut(s) | 78, 507 |
| Sse9I | AATT | 3 cut(s) | 140, 382, 586 |
| SspMI | CTAG | 2 cut(s) | 195, 561 |
| StyD4I | CCNGG | 2 cut(s) | 76, 505 |
| TaaI | ACNGT | 2 cut(s) | 68, 115 |
| TaqI | TCGA | 2 cut(s) | 84, 159 |
| TasI | AATT | 3 cut(s) | 140, 382, 586 |
| TatI | WGTACW | 2 cut(s) | 512, 568 |
| TfiI | GAWTC | 3 cut(s) | 178, 459, 476 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 2 cut(s) | 254, 285 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 1 cut(s) | 285 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 134 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 522 |
| XapI | RAATTY | 2 cut(s) | 140, 382 |
| XspI | CTAG | 2 cut(s) | 195, 561 |
| ZrmI | AGTACT | 1 cut(s) | 570 |