Domain of unknown function (DUF3475)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g23120 FvH4_7g23140 |
| rosa_chinensis | RchiOBHm_Chr1g0367491 RchiOBHm_Chr1g0367511 RchiOBHm_Chr1g0368371 RchiOBHm_Chr1g0368421 |
| rosa_laevigata | RLG00000027210 RLG00000027215 |
| rosa_multiflora | Rmu_sc0002709.1_g000014 Rmu_sc0002709.1_g000044 Rmu_sc0006908.1_g000025 Rmu_sc0006908.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00125250 Rroxscaffold_4G00288520 Rroxscaffold_4G00288600 |
| rosa_rugosa | Rorug01G0341700 Rorug01G0341700 |
| rosa_samantha | Rh1AG348200 Rh1AG348700 Rh1AG349200 Rh1BG311200 Rh1BG311400 Rh1BG312000 Rh1CG326500 Rh1CG326700 Rh1CG327100 Rh1DG343000 Rh1DG343200 Rh1DG343600 |
| rosa_wichuraiana | Rw0G002420 Rw0G002440 Rw1G031000 Rw1G031030 Rw1G031090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 701 |
| AccI | GTMKAC | 1 cut(s) | 882 |
| AciI | CCGC | 4 cut(s) | 568, 804, 1070, 1288 |
| AclWI | GGATC | 4 cut(s) | 352, 492, 677, 1221 |
| AcoI | YGGCCR | 1 cut(s) | 288 |
| AcsI | RAATTY | 2 cut(s) | 184, 583 |
| AcuI | CTGAAG | 2 cut(s) | 584, 981 |
| AdeI | CACNNNGTG | 2 cut(s) | 577, 797 |
| AfaI | GTAC | 2 cut(s) | 899, 1164 |
| AflIII | ACRYGT | 1 cut(s) | 154 |
| AjnI | CCWGG | 2 cut(s) | 910, 1338 |
| AluBI | AGCT | 5 cut(s) | 205, 562, 769, 926, 931 |
| AluI | AGCT | 5 cut(s) | 205, 562, 769, 926, 931 |
| Alw26I | GTCTC | 2 cut(s) | 601, 1348 |
| AlwI | GGATC | 4 cut(s) | 352, 492, 677, 1221 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 710 |
| Ama87I | CYCGRG | 1 cut(s) | 539 |
| AoxI | GGCC | 4 cut(s) | 90, 288, 417, 1285 |
| ApeKI | GCWGC | 5 cut(s) | 64, 121, 800, 943, 1310 |
| ApoI | RAATTY | 2 cut(s) | 184, 583 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1326, 1358 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 44, 47, 434 |
| AspS9I | GGNCC | 1 cut(s) | 527 |
| AsuHPI | GGTGA | 1 cut(s) | 1059 |
| AvaI | CYCGRG | 1 cut(s) | 539 |
| AvaII | GGWCC | 1 cut(s) | 527 |
| BalI | TGGCCA | 1 cut(s) | 290 |
| BanII | GRGCYC | 1 cut(s) | 962 |
| BauI | CACGAG | 1 cut(s) | 572 |
| BbsI | GAAGAC | 2 cut(s) | 643, 1199 |
| BbvI | GCAGC | 5 cut(s) | 76, 108, 787, 930, 1322 |
| BccI | CCATC | 5 cut(s) | 135, 378, 400, 518, 754 |
| BciT130I | CCWGG | 2 cut(s) | 912, 1340 |
| BclI | TGATCA | 1 cut(s) | 727 |
| BcoDI | GTCTC | 2 cut(s) | 601, 1348 |
| BfaI | CTAG | 6 cut(s) | 117, 321, 741, 794, 867, 1277 |
| BglII | AGATCT | 1 cut(s) | 1009 |
| BisI | GCNGC | 8 cut(s) | 65, 122, 569, 801, 804, 944, 1288, 1311 |
| BlpI | GCTNAGC | 1 cut(s) | 927 |
| BlsI | GCNGC | 8 cut(s) | 66, 123, 570, 802, 805, 945, 1289, 1312 |
| Bme1390I | CCNGG | 2 cut(s) | 912, 1340 |
| Bme18I | GGWCC | 1 cut(s) | 527 |
| BmeT110I | CYCGRG | 1 cut(s) | 539 |
| BmgT120I | GGNCC | 1 cut(s) | 527 |
| BmrFI | CCNGG | 2 cut(s) | 912, 1340 |
| BmsI | GCATC | 3 cut(s) | 639, 697, 766 |
| BpiI | GAAGAC | 2 cut(s) | 643, 1199 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 124, 156 |
| Bpu10I | CCTNAGC | 1 cut(s) | 808 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 927 |
| BsaAI | YACGTR | 1 cut(s) | 625 |
| BsaBI | GATNNNNATC | 1 cut(s) | 726 |
| BsaI | GGTCTC | 2 cut(s) | 601, 1348 |
| BsaJI | CCNNGG | 2 cut(s) | 189, 1338 |
| Bse8I | GATNNNNATC | 1 cut(s) | 726 |
| BseBI | CCWGG | 2 cut(s) | 912, 1340 |
| BseDI | CCNNGG | 2 cut(s) | 189, 1338 |
| BseGI | GGATG | 6 cut(s) | 220, 316, 389, 630, 781, 1147 |
| BseJI | GATNNNNATC | 1 cut(s) | 726 |
| BseMII | CTCAG | 4 cut(s) | 122, 134, 181, 918 |
| BseRI | GAGGAG | 1 cut(s) | 1040 |
| BseXI | GCAGC | 5 cut(s) | 76, 108, 787, 930, 1322 |
| BsgI | GTGCAG | 1 cut(s) | 800 |
| BshFI | GGCC | 4 cut(s) | 92, 290, 419, 1287 |
| BsiHKCI | CYCGRG | 1 cut(s) | 539 |
| BsmAI | GTCTC | 2 cut(s) | 601, 1348 |
| BsnI | GGCC | 4 cut(s) | 92, 290, 419, 1287 |
| Bso31I | GGTCTC | 2 cut(s) | 601, 1348 |
| BsoBI | CYCGRG | 1 cut(s) | 539 |
| Bsp1286I | GDGCHC | 1 cut(s) | 962 |
| Bsp1407I | TGTACA | 1 cut(s) | 897 |
| Bsp143I | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 927 |
| BspACI | CCGC | 4 cut(s) | 568, 804, 1070, 1288 |
| BspANI | GGCC | 4 cut(s) | 92, 290, 419, 1287 |
| BspCNI | CTCAG | 4 cut(s) | 123, 135, 180, 919 |
| BspPI | GGATC | 4 cut(s) | 352, 492, 677, 1221 |
| BspTNI | GGTCTC | 2 cut(s) | 601, 1348 |
| BsrGI | TGTACA | 1 cut(s) | 897 |
| BssECI | CCNNGG | 2 cut(s) | 189, 1338 |
| BssMI | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| BssSI | CACGAG | 1 cut(s) | 572 |
| Bst2BI | CACGAG | 1 cut(s) | 572 |
| Bst2UI | CCWGG | 2 cut(s) | 912, 1340 |
| Bst4CI | ACNGT | 3 cut(s) | 274, 902, 1366 |
| BstAUI | TGTACA | 1 cut(s) | 897 |
| BstBAI | YACGTR | 1 cut(s) | 625 |
| BstC8I | GCNNGC | 3 cut(s) | 342, 761, 1074 |
| BstDEI | CTNAG | 7 cut(s) | 131, 143, 167, 520, 808, 927, 1318 |
| BstDSI | CCRYGG | 1 cut(s) | 189 |
| BstF5I | GGATG | 6 cut(s) | 220, 316, 389, 630, 781, 1147 |
| BstKTI | GATC | 7 cut(s) | 360, 487, 672, 730, 1012, 1216, 1360 |
| BstMAI | GTCTC | 2 cut(s) | 601, 1348 |
| BstMBI | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 568, 809, 957, 987, 1130 |
| BstNI | CCWGG | 2 cut(s) | 912, 1340 |
| BstNSI | RCATGY | 3 cut(s) | 158, 344, 680 |
| BstSCI | CCNGG | 2 cut(s) | 910, 1338 |
| BstSNI | TACGTA | 1 cut(s) | 625 |
| BstV1I | GCAGC | 5 cut(s) | 76, 108, 787, 930, 1322 |
| BstV2I | GAAGAC | 2 cut(s) | 643, 1199 |
| BstX2I | RGATCY | 3 cut(s) | 484, 1009, 1213 |
| BstYI | RGATCY | 3 cut(s) | 484, 1009, 1213 |
| BsuRI | GGCC | 4 cut(s) | 92, 290, 419, 1287 |
| BtgI | CCRYGG | 1 cut(s) | 189 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| BtsCI | GGATG | 6 cut(s) | 220, 316, 389, 630, 781, 1147 |
| BtsI | GCAGTG | 4 cut(s) | 81, 510, 812, 971 |
| BtsIMutI | CAGTG | 5 cut(s) | 81, 270, 510, 812, 971 |
| Cac8I | GCNNGC | 3 cut(s) | 342, 761, 1074 |
| CaiI | CAGNNNCTG | 1 cut(s) | 710 |
| Cfr13I | GGNCC | 1 cut(s) | 527 |
| Csp6I | GTAC | 2 cut(s) | 898, 1163 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 267, 302, 1041, 1076, 1085, 1120 |
| CviAII | CATG | 5 cut(s) | 112, 155, 341, 396, 677 |
| CviQI | GTAC | 2 cut(s) | 898, 1163 |
| DdeI | CTNAG | 7 cut(s) | 131, 143, 167, 520, 808, 927, 1318 |
| DpnI | GATC | 7 cut(s) | 359, 486, 671, 729, 1011, 1215, 1359 |
| DpnII | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| DraI | TTTAAA | 1 cut(s) | 183 |
| DraIII | CACNNNGTG | 2 cut(s) | 577, 797 |
| EaeI | YGGCCR | 1 cut(s) | 288 |
| Eco105I | TACGTA | 1 cut(s) | 625 |
| Eco24I | GRGCYC | 1 cut(s) | 962 |
| Eco31I | GGTCTC | 2 cut(s) | 601, 1348 |
| Eco47I | GGWCC | 1 cut(s) | 527 |
| Eco57I | CTGAAG | 2 cut(s) | 584, 981 |
| Eco88I | CYCGRG | 1 cut(s) | 539 |
| EcoRII | CCWGG | 2 cut(s) | 910, 1338 |
| EcoT22I | ATGCAT | 1 cut(s) | 1233 |
| EcoT38I | GRGCYC | 1 cut(s) | 962 |
| FaeI | CATG | 5 cut(s) | 115, 158, 344, 399, 680 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 31, 32, 64, 979, 1011 |
| FatI | CATG | 5 cut(s) | 111, 154, 340, 395, 676 |
| FbaI | TGATCA | 1 cut(s) | 727 |
| FblI | GTMKAC | 1 cut(s) | 882 |
| Fnu4HI | GCNGC | 8 cut(s) | 65, 122, 569, 801, 804, 944, 1288, 1311 |
| FokI | GGATG | 6 cut(s) | 227, 303, 396, 617, 788, 1134 |
| FriOI | GRGCYC | 1 cut(s) | 962 |
| Fsp4HI | GCNGC | 8 cut(s) | 65, 122, 569, 801, 804, 944, 1288, 1311 |
| FspBI | CTAG | 6 cut(s) | 117, 321, 741, 794, 867, 1277 |
| GluI | GCNGC | 8 cut(s) | 65, 122, 569, 801, 804, 944, 1288, 1311 |
| HaeIII | GGCC | 4 cut(s) | 92, 290, 419, 1287 |
| Hin1II | CATG | 5 cut(s) | 115, 158, 344, 399, 680 |
| HincII | GTYRAC | 3 cut(s) | 160, 373, 883 |
| HindII | GTYRAC | 3 cut(s) | 160, 373, 883 |
| HindIII | AAGCTT | 1 cut(s) | 203 |
| HinfI | GANTC | 5 cut(s) | 108, 139, 304, 722, 1028 |
| HpaI | GTTAAC | 1 cut(s) | 160 |
| HphI | GGTGA | 1 cut(s) | 1059 |
| Hpy166II | GTNNAC | 3 cut(s) | 160, 373, 883 |
| Hpy188III | TCNNGA | 2 cut(s) | 488, 1007 |
| Hpy8I | GTNNAC | 3 cut(s) | 160, 373, 883 |
| HpyAV | CCTTC | 5 cut(s) | 103, 322, 404, 424, 873 |
| HpyCH4III | ACNGT | 3 cut(s) | 274, 902, 1366 |
| HpyCH4IV | ACGT | 1 cut(s) | 624 |
| HpyCH4V | TGCA | 8 cut(s) | 104, 452, 817, 824, 951, 981, 1181, 1231 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 568, 809, 957, 987, 1130 |
| HpyF3I | CTNAG | 7 cut(s) | 131, 143, 167, 520, 808, 927, 1318 |
| HpySE526I | ACGT | 1 cut(s) | 624 |
| Hsp92II | CATG | 5 cut(s) | 115, 158, 344, 399, 680 |
| Ksp22I | TGATCA | 1 cut(s) | 727 |
| KspAI | GTTAAC | 1 cut(s) | 160 |
| Kzo9I | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| LmnI | GCTCC | 2 cut(s) | 129, 784 |
| Lsp1109I | GCAGC | 5 cut(s) | 76, 108, 787, 930, 1322 |
| LweI | GCATC | 3 cut(s) | 639, 697, 766 |
| MaeI | CTAG | 6 cut(s) | 117, 321, 741, 794, 867, 1277 |
| MaeII | ACGT | 1 cut(s) | 624 |
| MaeIII | GTNAC | 1 cut(s) | 268 |
| MalI | GATC | 7 cut(s) | 359, 486, 671, 729, 1011, 1215, 1359 |
| MboI | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| MfeI | CAATTG | 1 cut(s) | 657 |
| MflI | RGATCY | 3 cut(s) | 484, 1009, 1213 |
| MhlI | GDGCHC | 1 cut(s) | 962 |
| MlsI | TGGCCA | 1 cut(s) | 290 |
| MluCI | AATT | 9 cut(s) | 184, 251, 531, 583, 657, 840, 1032, 1044, 1206 |
| MluNI | TGGCCA | 1 cut(s) | 290 |
| MlyI | GAGTC | 3 cut(s) | 117, 133, 1037 |
| MmeI | TCCRAC | 3 cut(s) | 192, 753, 1002 |
| Mox20I | TGGCCA | 1 cut(s) | 290 |
| Mph1103I | ATGCAT | 1 cut(s) | 1233 |
| MroXI | GAANNNNTTC | 3 cut(s) | 44, 47, 434 |
| MscI | TGGCCA | 1 cut(s) | 290 |
| MseI | TTAA | 6 cut(s) | 159, 182, 239, 1047, 1248, 1299 |
| MslI | CAYNNNNRTG | 1 cut(s) | 366 |
| Msp20I | TGGCCA | 1 cut(s) | 290 |
| MspR9I | CCNGG | 2 cut(s) | 912, 1340 |
| MunI | CAATTG | 1 cut(s) | 657 |
| MvaI | CCWGG | 2 cut(s) | 912, 1340 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 568, 809, 957, 987, 1130 |
| NdeII | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| NlaIII | CATG | 5 cut(s) | 115, 158, 344, 399, 680 |
| NmuCI | GTSAC | 1 cut(s) | 268 |
| NsiI | ATGCAT | 1 cut(s) | 1233 |
| NspI | RCATGY | 3 cut(s) | 158, 344, 680 |
| PaeI | GCATGC | 1 cut(s) | 344 |
| PaeR7I | CTCGAG | 1 cut(s) | 539 |
| PciI | ACATGT | 1 cut(s) | 154 |
| PdmI | GAANNNNTTC | 3 cut(s) | 44, 47, 434 |
| PfeI | GAWTC | 2 cut(s) | 304, 722 |
| PkrI | GCNGC | 8 cut(s) | 66, 123, 570, 802, 805, 945, 1289, 1312 |
| PleI | GAGTC | 3 cut(s) | 116, 133, 1036 |
| PpsI | GAGTC | 3 cut(s) | 116, 133, 1036 |
| Ppu21I | YACGTR | 1 cut(s) | 625 |
| PscI | ACATGT | 1 cut(s) | 154 |
| PsiI | TTATAA | 1 cut(s) | 701 |
| Psp6I | CCWGG | 2 cut(s) | 910, 1338 |
| PspGI | CCWGG | 2 cut(s) | 910, 1338 |
| PspPI | GGNCC | 1 cut(s) | 527 |
| PspXI | VCTCGAGB | 1 cut(s) | 539 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 599, 631 |
| PstNI | CAGNNNCTG | 1 cut(s) | 710 |
| PsuI | RGATCY | 3 cut(s) | 484, 1009, 1213 |
| RsaI | GTAC | 2 cut(s) | 899, 1164 |
| RsaNI | GTAC | 2 cut(s) | 898, 1163 |
| RseI | CAYNNNNRTG | 1 cut(s) | 366 |
| SalI | GTCGAC | 1 cut(s) | 881 |
| SaqAI | TTAA | 6 cut(s) | 159, 182, 239, 1047, 1248, 1299 |
| SatI | GCNGC | 8 cut(s) | 65, 122, 569, 801, 804, 944, 1288, 1311 |
| Sau3AI | GATC | 7 cut(s) | 357, 484, 669, 727, 1009, 1213, 1357 |
| Sau96I | GGNCC | 1 cut(s) | 527 |
| SchI | GAGTC | 3 cut(s) | 117, 133, 1037 |
| ScrFI | CCNGG | 2 cut(s) | 912, 1340 |
| SduI | GDGCHC | 1 cut(s) | 962 |
| SfaNI | GCATC | 3 cut(s) | 639, 697, 766 |
| Sfr274I | CTCGAG | 1 cut(s) | 539 |
| SinI | GGWCC | 1 cut(s) | 527 |
| SlaI | CTCGAG | 1 cut(s) | 539 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 366 |
| SmlI | CTYRAG | 1 cut(s) | 539 |
| SmoI | CTYRAG | 1 cut(s) | 539 |
| SnaBI | TACGTA | 1 cut(s) | 625 |
| SphI | GCATGC | 1 cut(s) | 344 |
| Sse9I | AATT | 9 cut(s) | 184, 251, 531, 583, 657, 840, 1032, 1044, 1206 |
| SsiI | CCGC | 4 cut(s) | 568, 804, 1070, 1288 |
| SspI | AATATT | 1 cut(s) | 829 |
| SspMI | CTAG | 6 cut(s) | 117, 321, 741, 794, 867, 1277 |
| StyD4I | CCNGG | 2 cut(s) | 910, 1338 |
| TaaI | ACNGT | 3 cut(s) | 274, 902, 1366 |
| TaiI | ACGT | 1 cut(s) | 627 |
| TaqI | TCGA | 4 cut(s) | 96, 540, 882, 962 |
| TasI | AATT | 9 cut(s) | 184, 251, 531, 583, 657, 840, 1032, 1044, 1206 |
| TatI | WGTACW | 1 cut(s) | 897 |
| TauI | GCSGC | 3 cut(s) | 571, 806, 1290 |
| TfiI | GAWTC | 2 cut(s) | 304, 722 |
| Tru1I | TTAA | 6 cut(s) | 159, 182, 239, 1047, 1248, 1299 |
| Tru9I | TTAA | 6 cut(s) | 159, 182, 239, 1047, 1248, 1299 |
| TscAI | CASTG | 5 cut(s) | 81, 277, 517, 819, 978 |
| TseFI | GTSAC | 1 cut(s) | 268 |
| TseI | GCWGC | 5 cut(s) | 64, 121, 800, 943, 1310 |
| Tsp45I | GTSAC | 1 cut(s) | 268 |
| TspDTI | ATGAA | 7 cut(s) | 165, 217, 384, 427, 443, 485, 1100 |
| TspGWI | ACGGA | 3 cut(s) | 178, 1226, 1368 |
| TspRI | CASTG | 5 cut(s) | 81, 277, 517, 819, 978 |
| VpaK11BI | GGWCC | 1 cut(s) | 527 |
| XapI | RAATTY | 2 cut(s) | 184, 583 |
| XceI | RCATGY | 3 cut(s) | 158, 344, 680 |
| XhoI | CTCGAG | 1 cut(s) | 539 |
| XmiI | GTMKAC | 1 cut(s) | 882 |
| XmnI | GAANNNNTTC | 3 cut(s) | 44, 47, 434 |
| XspI | CTAG | 6 cut(s) | 117, 321, 741, 794, 867, 1277 |
| Zsp2I | ATGCAT | 1 cut(s) | 1233 |