Domain of unknown function (DUF3475)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chorismate_synt | PF01264 | 61 - 410 | 4.4e-132 | Chorismate synthase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 901, 920 |
| Acc65I | GGTACC | 1 cut(s) | 932 |
| AccB1I | GGYRCC | 2 cut(s) | 394, 932 |
| AccII | CGCG | 2 cut(s) | 826, 1174 |
| AccIII | TCCGGA | 1 cut(s) | 1267 |
| AciI | CCGC | 5 cut(s) | 132, 824, 826, 921, 1172 |
| AclWI | GGATC | 2 cut(s) | 1151, 1227 |
| AcsI | RAATTY | 1 cut(s) | 911 |
| AcuI | CTGAAG | 2 cut(s) | 285, 522 |
| AfaI | GTAC | 6 cut(s) | 166, 414, 503, 651, 934, 1275 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 151, 331 |
| AflII | CTTAAG | 1 cut(s) | 593 |
| AgsI | TTSAA | 5 cut(s) | 48, 499, 860, 911, 1072 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 451 |
| AhlI | ACTAGT | 1 cut(s) | 1207 |
| AjiI | CACGTC | 1 cut(s) | 437 |
| AjnI | CCWGG | 2 cut(s) | 144, 301 |
| Alw21I | GWGCWC | 2 cut(s) | 77, 1215 |
| Alw26I | GTCTC | 4 cut(s) | 18, 210, 247, 1121 |
| AlwI | GGATC | 2 cut(s) | 1151, 1227 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 611, 728 |
| Aor13HI | TCCGGA | 1 cut(s) | 1267 |
| AoxI | GGCC | 3 cut(s) | 122, 299, 467 |
| ApeKI | GCWGC | 3 cut(s) | 155, 566, 752 |
| ApoI | RAATTY | 1 cut(s) | 911 |
| Asp718I | GGTACC | 1 cut(s) | 932 |
| AspA2I | CCTAGG | 1 cut(s) | 326 |
| AspS9I | GGNCC | 3 cut(s) | 51, 118, 129 |
| AsuC2I | CCSGG | 1 cut(s) | 946 |
| AsuHPI | GGTGA | 2 cut(s) | 784, 1120 |
| AsuII | TTCGAA | 1 cut(s) | 85 |
| AvaII | GGWCC | 3 cut(s) | 51, 118, 129 |
| AvrII | CCTAGG | 1 cut(s) | 326 |
| BaeGI | GKGCMC | 1 cut(s) | 397 |
| BanI | GGYRCC | 2 cut(s) | 394, 932 |
| BbsI | GAAGAC | 1 cut(s) | 666 |
| Bbv12I | GWGCWC | 2 cut(s) | 77, 1215 |
| BbvI | GCAGC | 3 cut(s) | 167, 553, 739 |
| BccI | CCATC | 2 cut(s) | 230, 1257 |
| BceAI | ACGGC | 1 cut(s) | 74 |
| BciT130I | CCWGG | 2 cut(s) | 146, 303 |
| BclI | TGATCA | 3 cut(s) | 424, 670, 691 |
| BcnI | CCSGG | 1 cut(s) | 946 |
| BcoDI | GTCTC | 4 cut(s) | 18, 210, 247, 1121 |
| BcuI | ACTAGT | 1 cut(s) | 1207 |
| BfaI | CTAG | 6 cut(s) | 327, 543, 869, 1092, 1113, 1208 |
| BfmI | CTRYAG | 1 cut(s) | 567 |
| BfrI | CTTAAG | 1 cut(s) | 593 |
| BfuAI | ACCTGC | 2 cut(s) | 901, 920 |
| BglII | AGATCT | 2 cut(s) | 481, 533 |
| BisI | GCNGC | 3 cut(s) | 156, 567, 753 |
| BlnI | CCTAGG | 1 cut(s) | 326 |
| BlsI | GCNGC | 3 cut(s) | 157, 568, 754 |
| BmcAI | AGTACT | 1 cut(s) | 166 |
| Bme1390I | CCNGG | 3 cut(s) | 146, 303, 946 |
| Bme18I | GGWCC | 3 cut(s) | 51, 118, 129 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 451 |
| BmgBI | CACGTC | 1 cut(s) | 437 |
| BmgT120I | GGNCC | 3 cut(s) | 51, 118, 129 |
| BmiI | GGNNCC | 3 cut(s) | 243, 396, 934 |
| BmrFI | CCNGG | 3 cut(s) | 146, 303, 946 |
| BmrI | ACTGGG | 1 cut(s) | 399 |
| BmsI | GCATC | 1 cut(s) | 751 |
| BmuI | ACTGGG | 1 cut(s) | 399 |
| BpiI | GAAGAC | 1 cut(s) | 666 |
| BpmI | CTGGAG | 2 cut(s) | 128, 1218 |
| Bpu14I | TTCGAA | 1 cut(s) | 85 |
| BpuMI | CCSGG | 1 cut(s) | 946 |
| BsaI | GGTCTC | 1 cut(s) | 247 |
| BsaJI | CCNNGG | 5 cut(s) | 125, 248, 326, 824, 1144 |
| BsaWI | WCCGGW | 1 cut(s) | 1267 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 80, 110, 289, 319 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 151, 331 |
| Bse1I | ACTGG | 2 cut(s) | 394, 722 |
| BseAI | TCCGGA | 1 cut(s) | 1267 |
| BseBI | CCWGG | 2 cut(s) | 146, 303 |
| BseDI | CCNNGG | 5 cut(s) | 125, 248, 326, 824, 1144 |
| BseGI | GGATG | 3 cut(s) | 20, 982, 1276 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 151, 331 |
| BseMII | CTCAG | 2 cut(s) | 603, 618 |
| BseNI | ACTGG | 2 cut(s) | 394, 722 |
| BseRI | GAGGAG | 1 cut(s) | 237 |
| BseSI | GKGCMC | 1 cut(s) | 397 |
| BseXI | GCAGC | 3 cut(s) | 167, 553, 739 |
| BseYI | CCCAGC | 1 cut(s) | 158 |
| BsgI | GTGCAG | 2 cut(s) | 170, 539 |
| Bsh1236I | CGCG | 2 cut(s) | 826, 1174 |
| BshFI | GGCC | 3 cut(s) | 124, 301, 469 |
| BshNI | GGYRCC | 2 cut(s) | 394, 932 |
| BsiHKAI | GWGCWC | 2 cut(s) | 77, 1215 |
| BsiSI | CCGG | 3 cut(s) | 121, 945, 1268 |
| BslFI | GGGAC | 2 cut(s) | 1033, 1154 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 151, 331 |
| BsmAI | GTCTC | 4 cut(s) | 18, 210, 247, 1121 |
| BsmBI | CGTCTC | 1 cut(s) | 18 |
| BsmFI | GGGAC | 2 cut(s) | 1033, 1154 |
| BsnI | GGCC | 3 cut(s) | 124, 301, 469 |
| Bso31I | GGTCTC | 1 cut(s) | 247 |
| Bsp119I | TTCGAA | 1 cut(s) | 85 |
| Bsp1286I | GDGCHC | 3 cut(s) | 77, 397, 1215 |
| Bsp13I | TCCGGA | 1 cut(s) | 1267 |
| Bsp1407I | TGTACA | 1 cut(s) | 1273 |
| Bsp143I | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| BspACI | CCGC | 5 cut(s) | 132, 824, 826, 921, 1172 |
| BspANI | GGCC | 3 cut(s) | 124, 301, 469 |
| BspCNI | CTCAG | 2 cut(s) | 604, 617 |
| BspEI | TCCGGA | 1 cut(s) | 1267 |
| BspFNI | CGCG | 2 cut(s) | 826, 1174 |
| BspLI | GGNNCC | 3 cut(s) | 243, 396, 934 |
| BspMAI | CTGCAG | 1 cut(s) | 571 |
| BspMI | ACCTGC | 2 cut(s) | 901, 920 |
| BspPI | GGATC | 2 cut(s) | 1151, 1227 |
| BspT104I | TTCGAA | 1 cut(s) | 85 |
| BspT107I | GGYRCC | 2 cut(s) | 394, 932 |
| BspTI | CTTAAG | 1 cut(s) | 593 |
| BspTNI | GGTCTC | 1 cut(s) | 247 |
| BsrGI | TGTACA | 1 cut(s) | 1273 |
| BsrI | ACTGG | 2 cut(s) | 394, 722 |
| BssECI | CCNNGG | 5 cut(s) | 125, 248, 326, 824, 1144 |
| BssMI | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| BssT1I | CCWWGG | 1 cut(s) | 326 |
| Bst2UI | CCWGG | 2 cut(s) | 146, 303 |
| Bst4CI | ACNGT | 2 cut(s) | 506, 1108 |
| Bst6I | CTCTTC | 1 cut(s) | 553 |
| BstAFI | CTTAAG | 1 cut(s) | 593 |
| BstAUI | TGTACA | 1 cut(s) | 1273 |
| BstBI | TTCGAA | 1 cut(s) | 85 |
| BstC8I | GCNNGC | 5 cut(s) | 153, 279, 824, 880, 1176 |
| BstDEI | CTNAG | 2 cut(s) | 604, 612 |
| BstDSI | CCRYGG | 2 cut(s) | 824, 1144 |
| BstF5I | GGATG | 3 cut(s) | 20, 982, 1276 |
| BstFNI | CGCG | 2 cut(s) | 826, 1174 |
| BstKTI | GATC | 9 cut(s) | 82, 427, 484, 515, 536, 673, 694, 1159, 1222 |
| BstMAI | GTCTC | 4 cut(s) | 18, 210, 247, 1121 |
| BstMBI | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 148, 572, 761, 869, 1088, 1202, 1238 |
| BstNI | CCWGG | 2 cut(s) | 146, 303 |
| BstNSI | RCATGY | 4 cut(s) | 348, 479, 807, 886 |
| BstSCI | CCNGG | 3 cut(s) | 144, 301, 944 |
| BstSFI | CTRYAG | 1 cut(s) | 567 |
| BstSLI | GKGCMC | 1 cut(s) | 397 |
| BstUI | CGCG | 2 cut(s) | 826, 1174 |
| BstV1I | GCAGC | 3 cut(s) | 167, 553, 739 |
| BstV2I | GAAGAC | 1 cut(s) | 666 |
| BstX2I | RGATCY | 2 cut(s) | 481, 533 |
| BstYI | RGATCY | 2 cut(s) | 481, 533 |
| BsuRI | GGCC | 3 cut(s) | 124, 301, 469 |
| BtgI | CCRYGG | 2 cut(s) | 824, 1144 |
| BtrI | CACGTC | 1 cut(s) | 437 |
| BtsCI | GGATG | 3 cut(s) | 20, 982, 1276 |
| BtsIMutI | CAGTG | 1 cut(s) | 522 |
| BveI | ACCTGC | 2 cut(s) | 901, 920 |
| Cac8I | GCNNGC | 5 cut(s) | 153, 279, 824, 880, 1176 |
| CaiI | CAGNNNCTG | 2 cut(s) | 611, 728 |
| Cfr13I | GGNCC | 3 cut(s) | 51, 118, 129 |
| Cfr42I | CCGCGG | 1 cut(s) | 827 |
| CpoI | CGGWCCG | 1 cut(s) | 129 |
| Csp6I | GTAC | 6 cut(s) | 165, 413, 502, 650, 933, 1274 |
| CspI | CGGWCCG | 1 cut(s) | 129 |
| CviQI | GTAC | 6 cut(s) | 165, 413, 502, 650, 933, 1274 |
| DdeI | CTNAG | 2 cut(s) | 604, 612 |
| DpnI | GATC | 9 cut(s) | 81, 426, 483, 514, 535, 672, 693, 1158, 1221 |
| DpnII | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| DriI | GACNNNNNGTC | 1 cut(s) | 451 |
| Eam1104I | CTCTTC | 1 cut(s) | 553 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 451 |
| EarI | CTCTTC | 1 cut(s) | 553 |
| Eco130I | CCWWGG | 1 cut(s) | 326 |
| Eco147I | AGGCCT | 1 cut(s) | 469 |
| Eco31I | GGTCTC | 1 cut(s) | 247 |
| Eco47I | GGWCC | 3 cut(s) | 51, 118, 129 |
| Eco57I | CTGAAG | 2 cut(s) | 285, 522 |
| EcoRI | GAATTC | 1 cut(s) | 911 |
| EcoRII | CCWGG | 2 cut(s) | 144, 301 |
| EcoT14I | CCWWGG | 1 cut(s) | 326 |
| EcoT22I | ATGCAT | 1 cut(s) | 809 |
| ErhI | CCWWGG | 1 cut(s) | 326 |
| Esp3I | CGTCTC | 1 cut(s) | 18 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 270, 302, 1269 |
| FaqI | GGGAC | 2 cut(s) | 1033, 1154 |
| FauI | CCCGC | 4 cut(s) | 819, 831, 914, 1179 |
| FauNDI | CATATG | 1 cut(s) | 490 |
| FbaI | TGATCA | 3 cut(s) | 424, 670, 691 |
| Fnu4HI | GCNGC | 3 cut(s) | 156, 567, 753 |
| FokI | GGATG | 3 cut(s) | 7, 989, 1283 |
| Fsp4HI | GCNGC | 3 cut(s) | 156, 567, 753 |
| FspBI | CTAG | 6 cut(s) | 327, 543, 869, 1092, 1113, 1208 |
| GluI | GCNGC | 3 cut(s) | 156, 567, 753 |
| GsaI | CCCAGC | 1 cut(s) | 162 |
| GsuI | CTGGAG | 2 cut(s) | 128, 1218 |
| HaeIII | GGCC | 3 cut(s) | 124, 301, 469 |
| HapII | CCGG | 3 cut(s) | 121, 945, 1268 |
| HindIII | AAGCTT | 1 cut(s) | 876 |
| HinfI | GANTC | 5 cut(s) | 203, 363, 374, 782, 990 |
| HpaII | CCGG | 3 cut(s) | 121, 945, 1268 |
| HphI | GGTGA | 2 cut(s) | 784, 1120 |
| Hpy166II | GTNNAC | 2 cut(s) | 640, 953 |
| Hpy188III | TCNNGA | 6 cut(s) | 360, 378, 606, 728, 994, 1268 |
| Hpy8I | GTNNAC | 2 cut(s) | 640, 953 |
| HpyAV | CCTTC | 3 cut(s) | 288, 325, 480 |
| HpyCH4III | ACNGT | 2 cut(s) | 506, 1108 |
| HpyCH4IV | ACGT | 1 cut(s) | 436 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 148, 572, 761, 869, 1088, 1202, 1238 |
| HpyF3I | CTNAG | 2 cut(s) | 604, 612 |
| HpySE526I | ACGT | 1 cut(s) | 436 |
| Kpn2I | TCCGGA | 1 cut(s) | 1267 |
| KpnI | GGTACC | 1 cut(s) | 936 |
| Ksp22I | TGATCA | 3 cut(s) | 424, 670, 691 |
| KspI | CCGCGG | 1 cut(s) | 827 |
| Kzo9I | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| LmnI | GCTCC | 3 cut(s) | 80, 147, 572 |
| Lsp1109I | GCAGC | 3 cut(s) | 167, 553, 739 |
| LweI | GCATC | 1 cut(s) | 751 |
| MaeI | CTAG | 6 cut(s) | 327, 543, 869, 1092, 1113, 1208 |
| MaeII | ACGT | 1 cut(s) | 436 |
| MaeIII | GTNAC | 3 cut(s) | 187, 799, 1108 |
| MalI | GATC | 9 cut(s) | 81, 426, 483, 514, 535, 672, 693, 1158, 1221 |
| MboI | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| MboII | GAAGA | 5 cut(s) | 74, 383, 528, 570, 671 |
| MfeI | CAATTG | 2 cut(s) | 552, 1086 |
| MflI | RGATCY | 2 cut(s) | 481, 533 |
| MhlI | GDGCHC | 3 cut(s) | 77, 397, 1215 |
| MluCI | AATT | 8 cut(s) | 175, 231, 315, 552, 810, 817, 911, 1086 |
| MlyI | GAGTC | 3 cut(s) | 212, 372, 999 |
| Mph1103I | ATGCAT | 1 cut(s) | 809 |
| MroI | TCCGGA | 1 cut(s) | 1267 |
| MseI | TTAA | 3 cut(s) | 594, 941, 1226 |
| MslI | CAYNNNNRTG | 3 cut(s) | 213, 960, 1055 |
| MspA1I | CMGCKG | 2 cut(s) | 158, 826 |
| MspCI | CTTAAG | 1 cut(s) | 593 |
| MspI | CCGG | 3 cut(s) | 121, 945, 1268 |
| MspR9I | CCNGG | 3 cut(s) | 146, 303, 946 |
| MunI | CAATTG | 2 cut(s) | 552, 1086 |
| MvaI | CCWGG | 2 cut(s) | 146, 303 |
| MvnI | CGCG | 2 cut(s) | 826, 1174 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 148, 572, 761, 869, 1088, 1202, 1238 |
| NciI | CCSGG | 1 cut(s) | 946 |
| NdeI | CATATG | 1 cut(s) | 490 |
| NdeII | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| NlaIV | GGNNCC | 3 cut(s) | 243, 396, 934 |
| NmuCI | GTSAC | 2 cut(s) | 799, 1108 |
| NsiI | ATGCAT | 1 cut(s) | 809 |
| NspI | RCATGY | 4 cut(s) | 348, 479, 807, 886 |
| NspV | TTCGAA | 1 cut(s) | 85 |
| PceI | AGGCCT | 1 cut(s) | 469 |
| PfeI | GAWTC | 2 cut(s) | 374, 782 |
| PkrI | GCNGC | 3 cut(s) | 157, 568, 754 |
| PleI | GAGTC | 3 cut(s) | 211, 371, 998 |
| PpsI | GAGTC | 3 cut(s) | 211, 371, 998 |
| Psp6I | CCWGG | 2 cut(s) | 144, 301 |
| PspFI | CCCAGC | 1 cut(s) | 158 |
| PspGI | CCWGG | 2 cut(s) | 144, 301 |
| PspN4I | GGNNCC | 3 cut(s) | 243, 396, 934 |
| PspPI | GGNCC | 3 cut(s) | 51, 118, 129 |
| PstI | CTGCAG | 1 cut(s) | 571 |
| PstNI | CAGNNNCTG | 2 cut(s) | 611, 728 |
| PsuI | RGATCY | 2 cut(s) | 481, 533 |
| PvuII | CAGCTG | 1 cut(s) | 158 |
| RsaI | GTAC | 6 cut(s) | 166, 414, 503, 651, 934, 1275 |
| RsaNI | GTAC | 6 cut(s) | 165, 413, 502, 650, 933, 1274 |
| RseI | CAYNNNNRTG | 3 cut(s) | 213, 960, 1055 |
| Rsr2I | CGGWCCG | 1 cut(s) | 129 |
| RsrII | CGGWCCG | 1 cut(s) | 129 |
| SacII | CCGCGG | 1 cut(s) | 827 |
| SaqAI | TTAA | 3 cut(s) | 594, 941, 1226 |
| SatI | GCNGC | 3 cut(s) | 156, 567, 753 |
| Sau3AI | GATC | 9 cut(s) | 79, 424, 481, 512, 533, 670, 691, 1156, 1219 |
| Sau96I | GGNCC | 3 cut(s) | 51, 118, 129 |
| ScaI | AGTACT | 1 cut(s) | 166 |
| SchI | GAGTC | 3 cut(s) | 212, 372, 999 |
| ScrFI | CCNGG | 3 cut(s) | 146, 303, 946 |
| SduI | GDGCHC | 3 cut(s) | 77, 397, 1215 |
| SfaNI | GCATC | 1 cut(s) | 751 |
| SfcI | CTRYAG | 1 cut(s) | 567 |
| Sfr303I | CCGCGG | 1 cut(s) | 827 |
| SfuI | TTCGAA | 1 cut(s) | 85 |
| SgrBI | CCGCGG | 1 cut(s) | 827 |
| SinI | GGWCC | 3 cut(s) | 51, 118, 129 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 213, 960, 1055 |
| SmlI | CTYRAG | 1 cut(s) | 593 |
| SmoI | CTYRAG | 1 cut(s) | 593 |
| SpeI | ACTAGT | 1 cut(s) | 1207 |
| Sse9I | AATT | 8 cut(s) | 175, 231, 315, 552, 810, 817, 911, 1086 |
| SseBI | AGGCCT | 1 cut(s) | 469 |
| SsiI | CCGC | 5 cut(s) | 132, 824, 826, 921, 1172 |
| SspMI | CTAG | 6 cut(s) | 327, 543, 869, 1092, 1113, 1208 |
| StuI | AGGCCT | 1 cut(s) | 469 |
| StyD4I | CCNGG | 3 cut(s) | 144, 301, 944 |
| StyI | CCWWGG | 1 cut(s) | 326 |
| TaaI | ACNGT | 2 cut(s) | 506, 1108 |
| TaiI | ACGT | 1 cut(s) | 439 |
| TaqI | TCGA | 2 cut(s) | 85, 455 |
| TaqII | GACCGA | 1 cut(s) | 68 |
| TasI | AATT | 8 cut(s) | 175, 231, 315, 552, 810, 817, 911, 1086 |
| TatI | WGTACW | 2 cut(s) | 164, 1273 |
| TfiI | GAWTC | 2 cut(s) | 374, 782 |
| Tru1I | TTAA | 3 cut(s) | 594, 941, 1226 |
| Tru9I | TTAA | 3 cut(s) | 594, 941, 1226 |
| TscAI | CASTG | 1 cut(s) | 522 |
| TseFI | GTSAC | 2 cut(s) | 799, 1108 |
| TseI | GCWGC | 3 cut(s) | 155, 566, 752 |
| Tsp45I | GTSAC | 2 cut(s) | 799, 1108 |
| TspDTI | ATGAA | 3 cut(s) | 384, 392, 993 |
| TspGWI | ACGGA | 1 cut(s) | 94 |
| TspRI | CASTG | 1 cut(s) | 522 |
| Vha464I | CTTAAG | 1 cut(s) | 593 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 118, 129 |
| XapI | RAATTY | 1 cut(s) | 911 |
| XceI | RCATGY | 4 cut(s) | 348, 479, 807, 886 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 31 |
| XmaJI | CCTAGG | 1 cut(s) | 326 |
| XspI | CTAG | 6 cut(s) | 327, 543, 869, 1092, 1113, 1208 |
| ZrmI | AGTACT | 1 cut(s) | 166 |
| Zsp2I | ATGCAT | 1 cut(s) | 809 |