Rmu_co8425575.1_g000001

Leucine rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8425575.1
OG0000024
Physical Location & Seq
Reverse (-)
2 .. 1438
1437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8425575.1_g000001.1.cds

Sequence Viewer

Length: 1437 bp
atgcatctagatctatctgacaacaatcttcatggccaaataccaaaatggatgtggaattcaactagtgaaacgttgagatacctcaacctctctcacaaccacttaactggatttgaagaaaattcgatcatgattccatggcatcggttaagctctttacagctagactctaacatgttacgaggatcactgccaattccagggctgtcaatggcagtctattctgtttcaaacaatgaatatgaaggagaaattccagcaacattctgtaatgcggggacgctaactattcttgatttgtctaacaacaacctgaatggcatgattcctcaatgttttgagaatttcggagctcttcagatattgaaactgcggaacaattcttttcacggagatattcctcaaatatgttcaaacagatgtacggagttggcagcgattgacttgagttataatcagctacaagggaagctaccaagatcaattgctaattgtcctcagttgatgtttcttaatttgggaaataatcagatcagtgataccttcccctcttggttaggagtgcttcaacagttaaaaattctcattttgcggtccaatatatttcatggcataattggaaagcctgcaagtagccatgagttccctaagctgtccatcattgatttatctagcaatgatttttcaggtctgttgccctccaactacttagagaactggaatgccatgaaatttgttgatgaaaacgagcaaatatacgtccaatccgctgtcatcttcgggatgtatccagacacgttccactatgattacccgattacagtttttagcaaaggtattcaattgaagtatttcaagaccccttatcttctgagactcatagacctctcaagtaacaaatttgaaggagagattccaggtatcattgggaatctaagagggcttcatttgctcaatctttgcaacaacactctcactggtcccatcccctcatctttggggaacttgactgctcttgaatcattggatctctccctaaatcagctctcaggaaagatccccggtgatctagcacaactgacattccttgcatacttcaatgtatcccacaatcgtctctatggttcaatcccacaaggtcgacagtttgatacattccaagaggatatgtaccgaggaaactcaggtttgtgtggaaaacctttgtcaaagaaatgtgaggattctgagagcgcaacaccacaaacaaactttcaacaagaccaagattctgggtttcaaattgagctagattggtttgtggtgctgccaggagttgttactggtctaatagttggagtggttggggaaaacttttggacagccaagaagcatgattggtttataaaggcattcagcaggaggagggagccgagaagcacaaggcggaggagg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

479

Amino Acids

54.01

Weight (kDa)

6.19

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 456, 1388
AccI GTMKAC 1 cut(s) 1144
AciI CCGC 5 cut(s) 278, 376, 595, 771, 1429
AclI AACGTT 1 cut(s) 74
AclWI GGATC 3 cut(s) 196, 1038, 1054
AcoI YGGCCR 1 cut(s) 34
AcsI RAATTY 7 cut(s) 58, 124, 255, 346, 582, 734, 902
AcuI CTGAAG 1 cut(s) 344
AfaI GTAC 2 cut(s) 427, 1175
AfiI CCNNNNNNNGG 1 cut(s) 203
AflIII ACRYGT 2 cut(s) 177, 798
AhlI ACTAGT 1 cut(s) 65
AjnI CCWGG 3 cut(s) 202, 919, 1312
AluBI AGCT 8 cut(s) 156, 166, 356, 463, 475, 655, 1048, 1291
AluI AGCT 8 cut(s) 156, 166, 356, 463, 475, 655, 1048, 1291
Alw21I GWGCWC 1 cut(s) 358
Alw26I GTCTC 2 cut(s) 871, 1124
AlwI GGATC 3 cut(s) 196, 1038, 1054
AoxI GGCC 1 cut(s) 34
ApeKI GCWGC 2 cut(s) 437, 1309
ApoI RAATTY 7 cut(s) 58, 124, 255, 346, 582, 734, 902
Asp700I GAANNNNTTC 1 cut(s) 854
AspLEI GCGC 1 cut(s) 1238
AspS9I GGNCC 2 cut(s) 597, 983
AsuC2I CCSGG 1 cut(s) 1065
AsuHPI GGTGA 1 cut(s) 1079
AvaII GGWCC 2 cut(s) 597, 983
BalI TGGCCA 1 cut(s) 36
BanII GRGCYC 1 cut(s) 358
Bbv12I GWGCWC 1 cut(s) 358
BbvI GCAGC 2 cut(s) 449, 1296
BccI CCATC 2 cut(s) 668, 995
BciT130I CCWGG 3 cut(s) 204, 921, 1314
BciVI GTATCC 2 cut(s) 801, 1117
BcnI CCSGG 1 cut(s) 1065
BcoDI GTCTC 2 cut(s) 871, 1124
BcuI ACTAGT 1 cut(s) 65
BfaI CTAG 6 cut(s) 8, 66, 167, 675, 1073, 1292
BfuI GTATCC 2 cut(s) 801, 1117
BglII AGATCT 1 cut(s) 10
BisI GCNGC 2 cut(s) 438, 1310
BlsI GCNGC 2 cut(s) 439, 1311
Bme1390I CCNGG 4 cut(s) 204, 921, 1065, 1314
Bme18I GGWCC 2 cut(s) 597, 983
BmgT120I GGNCC 2 cut(s) 597, 983
BmiI GGNNCC 2 cut(s) 985, 1413
BmrFI CCNGG 4 cut(s) 204, 921, 1065, 1314
BmsI GCATC 2 cut(s) 13, 154
Bpu10I CCTNAGC 1 cut(s) 651
BpuEI CTTGAG 2 cut(s) 469, 877
BpuMI CCSGG 1 cut(s) 1065
BsaJI CCNNGG 4 cut(s) 140, 203, 1063, 1177
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 4 cut(s) 115, 725, 985, 1330
Bse3DI GCAATG 1 cut(s) 685
BseBI CCWGG 3 cut(s) 204, 921, 1314
BseDI CCNNGG 4 cut(s) 140, 203, 1063, 1177
BseGI GGATG 3 cut(s) 57, 792, 987
BseLI CCNNNNNNNGG 1 cut(s) 203
BseMI GCAATG 1 cut(s) 685
BseMII CTCAG 5 cut(s) 515, 866, 1065, 1200, 1221
BseNI ACTGG 4 cut(s) 115, 725, 985, 1330
BseRI GAGGAG 1 cut(s) 1420
BseXI GCAGC 2 cut(s) 449, 1296
BshFI GGCC 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 358
BsiSI CCGG 1 cut(s) 1065
BslFI GGGAC 2 cut(s) 295, 969
BslI CCNNNNNNNGG 1 cut(s) 203
BsmAI GTCTC 2 cut(s) 871, 1124
BsmBI CGTCTC 1 cut(s) 1124
BsmFI GGGAC 2 cut(s) 295, 969
BsmI GAATGC 2 cut(s) 730, 1394
BsnI GGCC 1 cut(s) 36
Bsp1286I GDGCHC 1 cut(s) 358
Bsp143I GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
Bsp19I CCATGG 1 cut(s) 140
BspACI CCGC 5 cut(s) 278, 376, 595, 771, 1429
BspANI GGCC 1 cut(s) 36
BspCNI CTCAG 5 cut(s) 514, 867, 1064, 1199, 1222
BspHI TCATGA 1 cut(s) 132
BspLI GGNNCC 2 cut(s) 985, 1413
BspPI GGATC 3 cut(s) 196, 1038, 1054
BspQI GCTCTTC 1 cut(s) 363
BsrDI GCAATG 1 cut(s) 685
BsrI ACTGG 4 cut(s) 115, 725, 985, 1330
BssECI CCNNGG 4 cut(s) 140, 203, 1063, 1177
BssMI GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
BssT1I CCWWGG 1 cut(s) 140
Bst2UI CCWGG 3 cut(s) 204, 921, 1314
Bst4CI ACNGT 3 cut(s) 576, 826, 1149
Bst6I CTCTTC 1 cut(s) 363
BstC8I GCNNGC 1 cut(s) 630
BstDEI CTNAG 8 cut(s) 501, 651, 712, 875, 938, 1051, 1186, 1230
BstDSI CCRYGG 1 cut(s) 140
BstF5I GGATG 3 cut(s) 57, 792, 987
BstHHI GCGC 1 cut(s) 1238
BstKTI GATC 8 cut(s) 13, 132, 191, 485, 537, 1033, 1062, 1072
BstMAI GTCTC 2 cut(s) 871, 1124
BstMBI GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
BstMWI GCNNNNNNNGC 1 cut(s) 952
BstNI CCWGG 3 cut(s) 204, 921, 1314
BstNSI RCATGY 1 cut(s) 181
BstSCI CCNGG 4 cut(s) 202, 919, 1063, 1312
BstV1I GCAGC 2 cut(s) 449, 1296
BstX2I RGATCY 3 cut(s) 10, 1030, 1059
BstXI CCANNNNNNTGG 2 cut(s) 110, 1274
BstYI RGATCY 3 cut(s) 10, 1030, 1059
BsuI GTATCC 2 cut(s) 801, 1117
BsuRI GGCC 1 cut(s) 36
BtgI CCRYGG 1 cut(s) 140
BtsCI GGATG 3 cut(s) 57, 792, 987
BtsI GCAGTG 1 cut(s) 191
BtsIMutI CAGTG 3 cut(s) 191, 544, 978
Cac8I GCNNGC 1 cut(s) 630
CciI TCATGA 1 cut(s) 132
CfoI GCGC 1 cut(s) 1238
Cfr13I GGNCC 2 cut(s) 597, 983
CseI GACGC 1 cut(s) 292
Csp6I GTAC 2 cut(s) 426, 1174
CviAII CATG 9 cut(s) 32, 133, 141, 178, 325, 611, 641, 730, 1376
CviQI GTAC 2 cut(s) 426, 1174
DdeI CTNAG 8 cut(s) 501, 651, 712, 875, 938, 1051, 1186, 1230
DpnI GATC 8 cut(s) 12, 131, 190, 484, 536, 1032, 1061, 1071
DpnII GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
EaeI YGGCCR 1 cut(s) 34
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Ecl136II GAGCTC 1 cut(s) 356
Eco130I CCWWGG 1 cut(s) 140
Eco24I GRGCYC 1 cut(s) 358
Eco47I GGWCC 2 cut(s) 597, 983
Eco53kI GAGCTC 1 cut(s) 356
Eco57I CTGAAG 1 cut(s) 344
EcoICRI GAGCTC 1 cut(s) 356
EcoRI GAATTC 1 cut(s) 58
EcoRII CCWGG 3 cut(s) 202, 919, 1312
EcoT14I CCWWGG 1 cut(s) 140
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 358
ErhI CCWWGG 1 cut(s) 140
Esp3I CGTCTC 1 cut(s) 1124
FaeI CATG 9 cut(s) 35, 136, 144, 181, 328, 614, 644, 733, 1379
FaqI GGGAC 2 cut(s) 295, 969
FatI CATG 9 cut(s) 31, 132, 140, 177, 324, 610, 640, 729, 1375
FauI CCCGC 1 cut(s) 271
FblI GTMKAC 1 cut(s) 1144
Fnu4HI GCNGC 2 cut(s) 438, 1310
FokI GGATG 3 cut(s) 64, 799, 974
FriOI GRGCYC 1 cut(s) 358
Fsp4HI GCNGC 2 cut(s) 438, 1310
FspBI CTAG 6 cut(s) 8, 66, 167, 675, 1073, 1292
GlaI GCGC 1 cut(s) 1237
GluI GCNGC 2 cut(s) 438, 1310
HaeIII GGCC 1 cut(s) 36
HapII CCGG 1 cut(s) 1065
HgaI GACGC 1 cut(s) 292
HhaI GCGC 1 cut(s) 1238
Hin1II CATG 9 cut(s) 35, 136, 144, 181, 328, 614, 644, 733, 1379
Hin6I GCGC 1 cut(s) 1236
HinP1I GCGC 1 cut(s) 1236
HincII GTYRAC 1 cut(s) 1145
HindII GTYRAC 1 cut(s) 1145
HinfI GANTC 9 cut(s) 136, 170, 328, 879, 916, 934, 1022, 1226, 1271
HpaII CCGG 1 cut(s) 1065
HphI GGTGA 1 cut(s) 1079
Hpy166II GTNNAC 1 cut(s) 1145
Hpy188I TCNGA 6 cut(s) 19, 353, 363, 534, 876, 1231
Hpy188III TCNNGA 8 cut(s) 8, 133, 296, 784, 794, 859, 1019, 1053
Hpy8I GTNNAC 1 cut(s) 1145
HpyAV CCTTC 3 cut(s) 242, 556, 902
HpyCH4III ACNGT 3 cut(s) 576, 826, 1149
HpyCH4IV ACGT 3 cut(s) 74, 762, 800
HpyCH4V TGCA 4 cut(s) 4, 632, 966, 1094
HpyF10VI GCNNNNNNNGC 1 cut(s) 952
HpyF3I CTNAG 8 cut(s) 501, 651, 712, 875, 938, 1051, 1186, 1230
HpySE526I ACGT 3 cut(s) 74, 762, 800
Hsp92II CATG 9 cut(s) 35, 136, 144, 181, 328, 614, 644, 733, 1379
HspAI GCGC 1 cut(s) 1236
Kzo9I GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
LguI GCTCTTC 1 cut(s) 363
LmnI GCTCC 2 cut(s) 353, 1411
Lsp1109I GCAGC 2 cut(s) 449, 1296
LweI GCATC 2 cut(s) 13, 154
MaeI CTAG 6 cut(s) 8, 66, 167, 675, 1073, 1292
MaeII ACGT 3 cut(s) 74, 762, 800
MaeIII GTNAC 3 cut(s) 180, 896, 1321
MalI GATC 8 cut(s) 12, 131, 190, 484, 536, 1032, 1061, 1071
MboI GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
MboII GAAGA 5 cut(s) 20, 131, 350, 772, 863
MfeI CAATTG 2 cut(s) 486, 845
MflI RGATCY 3 cut(s) 10, 1030, 1059
MhlI GDGCHC 1 cut(s) 358
MlsI TGGCCA 1 cut(s) 36
MluNI TGGCCA 1 cut(s) 36
MlyI GAGTC 2 cut(s) 164, 873
MmeI TCCRAC 2 cut(s) 729, 1318
Mox20I TGGCCA 1 cut(s) 36
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 854
MscI TGGCCA 1 cut(s) 36
MseI TTAA 4 cut(s) 107, 152, 516, 578
Msp20I TGGCCA 1 cut(s) 36
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 1 cut(s) 1065
MspR9I CCNGG 4 cut(s) 204, 921, 1065, 1314
MunI CAATTG 2 cut(s) 486, 845
Mva1269I GAATGC 2 cut(s) 730, 1394
MvaI CCWGG 3 cut(s) 204, 921, 1314
MwoI GCNNNNNNNGC 1 cut(s) 952
NciI CCSGG 1 cut(s) 1065
NcoI CCATGG 1 cut(s) 140
NdeII GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
NlaIII CATG 9 cut(s) 35, 136, 144, 181, 328, 614, 644, 733, 1379
NlaIV GGNNCC 2 cut(s) 985, 1413
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 181
PagI TCATGA 1 cut(s) 132
PciI ACATGT 1 cut(s) 177
PciSI GCTCTTC 1 cut(s) 363
PctI GAATGC 2 cut(s) 730, 1394
PdmI GAANNNNTTC 1 cut(s) 854
PfeI GAWTC 7 cut(s) 136, 328, 916, 934, 1022, 1226, 1271
PkrI GCNGC 2 cut(s) 439, 1311
PleI GAGTC 2 cut(s) 164, 873
PpsI GAGTC 2 cut(s) 164, 873
PscI ACATGT 1 cut(s) 177
PsiI TTATAA 2 cut(s) 456, 1388
Psp124BI GAGCTC 1 cut(s) 358
Psp1406I AACGTT 1 cut(s) 74
Psp6I CCWGG 3 cut(s) 202, 919, 1312
PspGI CCWGG 3 cut(s) 202, 919, 1312
PspN4I GGNNCC 2 cut(s) 985, 1413
PspPI GGNCC 2 cut(s) 597, 983
PsuI RGATCY 3 cut(s) 10, 1030, 1059
RsaI GTAC 2 cut(s) 427, 1175
RsaNI GTAC 2 cut(s) 426, 1174
SacI GAGCTC 1 cut(s) 358
SalI GTCGAC 1 cut(s) 1143
SapI GCTCTTC 1 cut(s) 363
SaqAI TTAA 4 cut(s) 107, 152, 516, 578
SatI GCNGC 2 cut(s) 438, 1310
Sau3AI GATC 8 cut(s) 10, 129, 188, 482, 534, 1030, 1059, 1069
Sau96I GGNCC 2 cut(s) 597, 983
SchI GAGTC 2 cut(s) 164, 873
ScrFI CCNGG 4 cut(s) 204, 921, 1065, 1314
SduI GDGCHC 1 cut(s) 358
SfaNI GCATC 2 cut(s) 13, 154
SinI GGWCC 2 cut(s) 597, 983
SmlI CTYRAG 2 cut(s) 448, 892
SmoI CTYRAG 2 cut(s) 448, 892
SpeI ACTAGT 1 cut(s) 65
SsiI CCGC 5 cut(s) 278, 376, 595, 771, 1429
SspMI CTAG 6 cut(s) 8, 66, 167, 675, 1073, 1292
SstI GAGCTC 1 cut(s) 358
StyD4I CCNGG 4 cut(s) 202, 919, 1063, 1312
StyI CCWWGG 1 cut(s) 140
TaaI ACNGT 3 cut(s) 576, 826, 1149
TaiI ACGT 3 cut(s) 77, 765, 803
TaqI TCGA 2 cut(s) 128, 1144
TfiI GAWTC 7 cut(s) 136, 328, 916, 934, 1022, 1226, 1271
Tru1I TTAA 4 cut(s) 107, 152, 516, 578
Tru9I TTAA 4 cut(s) 107, 152, 516, 578
TscAI CASTG 3 cut(s) 198, 544, 985
TseI GCWGC 2 cut(s) 437, 1309
TspDTI ATGAA 7 cut(s) 20, 255, 261, 599, 746, 759, 938
TspGWI ACGGA 2 cut(s) 408, 443
TspRI CASTG 3 cut(s) 198, 544, 985
VpaK11BI GGWCC 2 cut(s) 597, 983
XapI RAATTY 7 cut(s) 58, 124, 255, 346, 582, 734, 902
XbaI TCTAGA 1 cut(s) 7
XceI RCATGY 1 cut(s) 181
XcmI CCANNNNNNNNNTGG 1 cut(s) 51
XmiI GTMKAC 1 cut(s) 1144
XmnI GAANNNNTTC 1 cut(s) 854
XspI CTAG 6 cut(s) 8, 66, 167, 675, 1073, 1292
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.