RchiOBHm_Chr1g0340631

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
32152451 .. 32155273
2823 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56740

Sequence Viewer

Length: 2823 bp
ATGGGGTTATCATCTCTATGCTTAATAATTGTGTCCATCTATATCCTTTCAACAATTGTGTTGTTCCATCTTGTGGTGGCCAACTCTTTGCAGTCATATAATACTCCTACTTGCCATGATAACGAGATCTATGCCTTGCTGCAATTCAAGCAAAGTTTTGTCATTGACATGTCTGCTTCGGATTATGAGGGTGCTTATCCAAAGATTTCTTCATGGAAATCAAACAGCAGTTGCTGCTCATGGGATGGCGTAGAGTGTGATGAGAAGACGGGTCACGTGATTGGGCTTGATCTTAGTAGCAGTTGTCTCTATGGCTCTTTCAGCTCCAACAACACCTTATTCAGTCTTGTTCATCTTCAGCGTCTAAACCTCGCTTATAATGACTTCATAGGATCTGAAGTTCCCACTAGCATCAGGAACTTTCCAAGGCTTAGGTATCTCAACCTCTCTTACTCTGCCTTTTCTGGTCATGTCCCATCCGAAGTTCGACAACTGTCTAAGTTGTCTTCCCTTGATCTATCTCGCAATTATGCTATGTTTTCCAATGAAGAATTGTTAAGAAGCCTAGCTCAAAATTTAACTGGCCTACAAACACTTGATCTTTCTTCCATTAATATATCATCCACAGTACCCGACACCCTGACAAATTTGTCTCTTTTGACATCCCTCATCCTTGATGACTGCGGGCTGTCTGGCAAATTACCAAAAAGAATCTTTAAATTACAGAATTTGAAGGTTCTTAGTGTGAGCTACAACCCTGCTTTCACGGGGTATTTTCCTGATGACTATAGTGGAAGTAGTCCTGATCTCATGTCACTCAAACTCTCGTCCACTAATTTTTTCATAAACCTCCCTTCTTTGATAGAAAGGTTTCCTTCACTGAAAGAGTTGGGTGTGAGATCATGCAATATTTCAGAAGGTCCAGTACCATTGTCACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAGTTTAATGGTCAAGTACCATTGTCACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATTTAATAAGTTTAATGGTCAAATCCCTACAGCTACGTTGGTAAACCTTACCCAACTTACATATCTATCACTTTCTAATAATTATTTTCATGGTTCAGTCCCCCAGTCCTTGTTCAATCTCATGAATCTTCAGAACCTTTATCTAGGATATAATAATTTGAGTGGTACAGTAGAGTTCCAGAAGTTTCTTAACCTACAGAAACTCACCGAGCTAGATCTATCTAATAATAATCTGGAATTGCTCGCAGAATCTAGATTTTTGAATAATGCAACTACTGTACTTCCAAAGTTTGAGTCTCTAGGATTGGGTGGGTGCAACATCAGAGAGTTCCCAGATTTCCTAAGATCTCAAGAAGCATTGCTTCAATTAGATCTCTCTGGAAACAAATTGCAAGGCCAAGTACCAAAATGGATGAGGAACATAAGCACCCAAGCTCTGCAATACATTAACATTTCTCATAACTTCCTGTCAGGCTTTGAGAAAACTGCAGCTGCCCTTCCATGGCCGAACCTTGAATTCTTAGACCTGTCATTCAACATGTTTCGTGAATTATTATTGTTACCTTTAACATCCTTCCGGTACTATAACATTGCAAACAACAACTTGACCGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTGAATACCTTGATTTGTCAAACAACAAGTTGATTGGCGACCTACCTCAGTGTGGGAGAAATTTCAGTGTTTATCTGGAATATCTCAAACTTGGAAACAACTCATTTCATGGAAATCTTCCTCAATCATACTTCAATGGAAGCAATTTAAGGATGATGGATATCAGTCACAACAGTTTCCAGGGGCAACTGCCGAGGTCACTAGCGAATTGTGCAAGTCTTGAAAGTTTAGTCCTTTCACACAATAATTTTGGTGATACCTTCCCTGTTTGGTTGGGGGCTCTCCCTGAGTTGAAAATTTTGAAAATGGACCACAATGTGTTCTATGGAGTGATTCTGAAACATGATAAGAAGAATCTTCAATTCCCGATGCTGCGTATTCTTGATTTGTCTTACAATGATTTCTCAGGTCAGTTTCCATTTGAATACATTTTTTCTGGAAATGGAACAATAAGTGTCACTCATGATCTGGAGTATTACCACTTTTATTCAATGTCTAGTGGGTATTACTCAATCACGATAATCTGTAAAGGTGTGGAGAGATACTACTCAAGAGTTCGAGAGGACTTGATACTCATTGACATCTCAAGCAACAATTTTGAAGGGAATATTCCTGAATACATTGGGAAACTTCAGGGGATTTGGTCACTCAATCTCTCCAATAACATTCTCACGGGTCGCATCCCATCATCCTTGAGCAACTTATCAAGGCTTGAATCATTGGACCTTTCACATAACAAGCTCTCTAGTGAGATTCCTCAGCAACTGGCACAACTTGATTCTCTCTCAAAGTTCAATGTCTCTCACAACAATCTCACAGGCCCTGTACCACGGGGAATCCACTTCACTACATTTGACAGCACTTCATATTTGGGAAACCAAGGATTGTGCGGAGATTTCTTGCCCAAGAAATGTGGAAATTCTGTGGGCAGTCAATTTCCACCTTCAACATCAGAAGATAATGACTCGGGCTCTGGAATTGAATTGGATTGGAAATTTGTTGTGGCAGGGTCAGGGAGTGGCTTGTTGGTGGGAGTGGTTGTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTCATTGAGATTGTTGCAGTACTGATCGTGTTTTCAAAAAGGATAAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

940

Amino Acids

105.17

Weight (kDa)

5.76

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 87 3.9e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 283 - 502 2.1e-15 Leucine-rich repeat region
LRR_8 PF13855 590 - 648 1.1e-08 Leucine rich repeat
LRR_8 PF13855 780 - 836 2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 378
AasI GACNNNNNNGTC 1 cut(s) 649
AccB7I CCANNNNNTGG 1 cut(s) 73
AciI CCGC 2 cut(s) 684, 2583
AclWI GGATC 3 cut(s) 400, 960, 1032
AcoI YGGCCR 2 cut(s) 78, 1550
AcsI RAATTY 8 cut(s) 574, 646, 727, 1562, 1753, 1989, 2611, 2687
AcuI CTGAAG 4 cut(s) 341, 417, 1160, 2309
AcvI CACGTG 1 cut(s) 277
AdeI CACNNNGTG 1 cut(s) 2011
AfaI GTAC 9 cut(s) 630, 927, 999, 1213, 1326, 1449, 1628, 2520, 2790
AfiI CCNNNNNNNGG 3 cut(s) 73, 1548, 1745
AflIII ACRYGT 2 cut(s) 168, 1584
AjnI CCWGG 1 cut(s) 1872
AjuI GAANNNNNNNTTGG 2 cut(s) 193, 225
AloI GAACNNNNNNTCC 2 cut(s) 384, 416
AluBI AGCT 8 cut(s) 324, 569, 750, 1079, 1258, 1481, 1538, 2434
AluI AGCT 8 cut(s) 324, 569, 750, 1079, 1258, 1481, 1538, 2434
Alw26I GTCTC 4 cut(s) 311, 657, 1347, 2497
AlwI GGATC 3 cut(s) 400, 960, 1032
AlwNI CAGNNNCTG 3 cut(s) 234, 2458, 2516
Ama87I CYCGRG 1 cut(s) 2659
AoxI GGCC 5 cut(s) 78, 583, 1441, 1550, 2512
ApeKI GCWGC 5 cut(s) 139, 234, 1535, 1538, 2065
ApoI RAATTY 8 cut(s) 574, 646, 727, 1562, 1753, 1989, 2611, 2687
ArsI GACNNNNNNTTYG 2 cut(s) 1325, 1357
AseI ATTAAT 1 cut(s) 612
Asp700I GAANNNNTTC 1 cut(s) 870
AspS9I GGNCC 6 cut(s) 920, 967, 1039, 2002, 2416, 2513
AsuHPI GGTGA 3 cut(s) 1243, 1659, 1958
AvaI CYCGRG 1 cut(s) 2659
AvaII GGWCC 5 cut(s) 920, 967, 1039, 2002, 2416
BalI TGGCCA 1 cut(s) 80
BanII GRGCYC 2 cut(s) 1975, 2666
BarI GAAGNNNNNNTAC 2 cut(s) 909, 941
BbrPI CACGTG 1 cut(s) 277
BbsI GAAGAC 2 cut(s) 272, 498
BbvCI CCTCAGC 1 cut(s) 2451
BbvI GCAGC 5 cut(s) 126, 221, 1525, 1547, 2052
BccI CCATC 6 cut(s) 44, 75, 239, 484, 1843, 2386
BcgI CGANNNNNNTGC 2 cut(s) 113, 147
BciT130I CCWGG 1 cut(s) 1874
BcoDI GTCTC 4 cut(s) 311, 657, 1347, 2497
BfaI CTAG 9 cut(s) 408, 566, 1190, 1259, 1299, 1346, 1895, 2190, 2439
BfmI CTRYAG 4 cut(s) 787, 1074, 1241, 1533
BglII AGATCT 4 cut(s) 126, 1261, 1391, 1417
BisI GCNGC 5 cut(s) 140, 235, 1536, 1539, 2066
BlsI GCNGC 5 cut(s) 141, 236, 1537, 1540, 2067
BmcAI AGTACT 1 cut(s) 2790
Bme1390I CCNGG 1 cut(s) 1874
Bme18I GGWCC 5 cut(s) 920, 967, 1039, 2002, 2416
BmeT110I CYCGRG 1 cut(s) 2659
BmgT120I GGNCC 6 cut(s) 920, 967, 1039, 2002, 2416, 2513
BmrFI CCNGG 1 cut(s) 1874
BmrI ACTGGG 1 cut(s) 1144
BmsI GCATC 3 cut(s) 420, 2052, 2382
BmuI ACTGGG 1 cut(s) 1144
BoxI GACNNNNGTC 1 cut(s) 493
BpiI GAAGAC 2 cut(s) 272, 498
BpmI CTGGAG 1 cut(s) 2183
Bpu10I CCTNAGC 2 cut(s) 431, 2451
BpuEI CTTGAG 4 cut(s) 1380, 2227, 2263, 2407
BsaAI YACGTR 1 cut(s) 277
BsaBI GATNNNNATC 1 cut(s) 1853
BsaJI CCNNGG 6 cut(s) 425, 1547, 1873, 1886, 2522, 2572
BsaWI WCCGGW 2 cut(s) 1623, 1655
BsaXI ACNNNNNCTCC 2 cut(s) 2718, 2748
Bsc4I CCNNNNNNNGG 3 cut(s) 73, 1548, 1745
Bse1I ACTGG 4 cut(s) 586, 923, 1150, 2463
Bse3DI GCAATG 2 cut(s) 1403, 1635
Bse8I GATNNNNATC 1 cut(s) 1853
BseBI CCWGG 1 cut(s) 1874
BseDI CCNNGG 6 cut(s) 425, 1547, 1873, 1886, 2522, 2572
BseJI GATNNNNATC 1 cut(s) 1853
BseLI CCNNNNNNNGG 3 cut(s) 73, 1548, 1745
BseMI GCAATG 2 cut(s) 1403, 1635
BseMII CTCAG 4 cut(s) 1754, 1971, 2112, 2465
BseNI ACTGG 4 cut(s) 586, 923, 1150, 2463
BseXI GCAGC 5 cut(s) 126, 221, 1525, 1547, 2052
BshFI GGCC 5 cut(s) 80, 585, 1443, 1552, 2514
BsiHKCI CYCGRG 1 cut(s) 2659
BsiSI CCGG 2 cut(s) 1624, 1656
BslFI GGGAC 2 cut(s) 458, 1130
BslI CCNNNNNNNGG 3 cut(s) 73, 1548, 1745
BsmAI GTCTC 4 cut(s) 311, 657, 1347, 2497
BsmFI GGGAC 2 cut(s) 458, 1130
BsnI GGCC 5 cut(s) 80, 585, 1443, 1552, 2514
BsoBI CYCGRG 1 cut(s) 2659
Bsp1286I GDGCHC 2 cut(s) 1975, 2666
Bsp19I CCATGG 1 cut(s) 1547
BspACI CCGC 2 cut(s) 684, 2583
BspANI GGCC 5 cut(s) 80, 585, 1443, 1552, 2514
BspCNI CTCAG 4 cut(s) 1753, 1972, 2111, 2464
BspHI TCATGA 2 cut(s) 1167, 2155
BspMAI CTGCAG 1 cut(s) 1537
BspPI GGATC 3 cut(s) 400, 960, 1032
BsrDI GCAATG 2 cut(s) 1403, 1635
BsrI ACTGG 4 cut(s) 586, 923, 1150, 2463
BssECI CCNNGG 6 cut(s) 425, 1547, 1873, 1886, 2522, 2572
BssT1I CCWWGG 3 cut(s) 425, 1547, 2572
Bst2UI CCWGG 1 cut(s) 1874
Bst4CI ACNGT 5 cut(s) 495, 628, 1216, 1324, 1868
BstAPI GCANNNNNTGC 1 cut(s) 234
BstBAI YACGTR 1 cut(s) 277
BstC8I GCNNGC 2 cut(s) 686, 1290
BstDSI CCRYGG 2 cut(s) 1547, 2522
BstMAI GTCTC 4 cut(s) 311, 657, 1347, 2497
BstMWI GCNNNNNNNGC 4 cut(s) 148, 234, 321, 1904
BstNI CCWGG 1 cut(s) 1874
BstNSI RCATGY 2 cut(s) 172, 1588
BstPAI GACNNNNGTC 1 cut(s) 493
BstSCI CCNGG 1 cut(s) 1872
BstSFI CTRYAG 4 cut(s) 787, 1074, 1241, 1533
BstV1I GCAGC 5 cut(s) 126, 221, 1525, 1547, 2052
BstV2I GAAGAC 2 cut(s) 272, 498
BstX2I RGATCY 7 cut(s) 126, 392, 952, 1024, 1261, 1391, 1417
BstYI RGATCY 7 cut(s) 126, 392, 952, 1024, 1261, 1391, 1417
BsuRI GGCC 5 cut(s) 80, 585, 1443, 1552, 2514
BtgI CCRYGG 2 cut(s) 1547, 2522
BtsIMutI CAGTG 3 cut(s) 878, 1748, 1765
Cac8I GCNNGC 2 cut(s) 686, 1290
CaiI CAGNNNCTG 3 cut(s) 234, 2458, 2516
CciI TCATGA 2 cut(s) 1167, 2155
Cfr13I GGNCC 6 cut(s) 920, 967, 1039, 2002, 2416, 2513
CseI GACGC 1 cut(s) 350
Csp6I GTAC 9 cut(s) 629, 926, 998, 1212, 1325, 1448, 1627, 2519, 2789
CspCI CAANNNNNGTGG 2 cut(s) 2587, 2622
CviQI GTAC 9 cut(s) 629, 926, 998, 1212, 1325, 1448, 1627, 2519, 2789
DraI TTTAAA 1 cut(s) 718
DraIII CACNNNGTG 1 cut(s) 2011
DrdI GACNNNNNNGTC 1 cut(s) 649
DseDI GACNNNNNNGTC 1 cut(s) 649
EaeI YGGCCR 2 cut(s) 78, 1550
Eco130I CCWWGG 3 cut(s) 425, 1547, 2572
Eco24I GRGCYC 2 cut(s) 1975, 2666
Eco32I GATATC 1 cut(s) 1855
Eco47I GGWCC 5 cut(s) 920, 967, 1039, 2002, 2416
Eco57I CTGAAG 4 cut(s) 341, 417, 1160, 2309
Eco72I CACGTG 1 cut(s) 277
Eco88I CYCGRG 1 cut(s) 2659
EcoO109I RGGNCCY 1 cut(s) 2513
EcoRI GAATTC 1 cut(s) 1562
EcoRII CCWGG 1 cut(s) 1872
EcoRV GATATC 1 cut(s) 1855
EcoT14I CCWWGG 3 cut(s) 425, 1547, 2572
EcoT38I GRGCYC 2 cut(s) 1975, 2666
ErhI CCWWGG 3 cut(s) 425, 1547, 2572
FalI AAGNNNNNCTT 4 cut(s) 859, 891, 1392, 1424
FaqI GGGAC 2 cut(s) 458, 1130
FauI CCCGC 1 cut(s) 677
Fnu4HI GCNGC 5 cut(s) 140, 235, 1536, 1539, 2066
FriOI GRGCYC 2 cut(s) 1975, 2666
Fsp4HI GCNGC 5 cut(s) 140, 235, 1536, 1539, 2066
FspBI CTAG 9 cut(s) 408, 566, 1190, 1259, 1299, 1346, 1895, 2190, 2439
GluI GCNGC 5 cut(s) 140, 235, 1536, 1539, 2066
GsuI CTGGAG 1 cut(s) 2183
HaeIII GGCC 5 cut(s) 80, 585, 1443, 1552, 2514
HapII CCGG 2 cut(s) 1624, 1656
HgaI GACGC 1 cut(s) 350
HpaII CCGG 2 cut(s) 1624, 1656
HphI GGTGA 3 cut(s) 1243, 1659, 1958
Hpy166II GTNNAC 2 cut(s) 831, 1090
Hpy188I TCNGA 8 cut(s) 181, 397, 481, 916, 1179, 1370, 2031, 2647
Hpy8I GTNNAC 2 cut(s) 831, 1090
HpyAV CCTTC 9 cut(s) 727, 864, 885, 911, 1553, 1630, 1963, 2288, 2646
HpyCH4III ACNGT 5 cut(s) 495, 628, 1216, 1324, 1868
HpyCH4IV ACGT 2 cut(s) 276, 1082
HpyF10VI GCNNNNNNNGC 4 cut(s) 148, 234, 321, 1904
HpySE526I ACGT 2 cut(s) 276, 1082
LmnI GCTCC 1 cut(s) 329
Lsp1109I GCAGC 5 cut(s) 126, 221, 1525, 1547, 2052
LweI GCATC 3 cut(s) 420, 2052, 2382
MaeI CTAG 9 cut(s) 408, 566, 1190, 1259, 1299, 1346, 1895, 2190, 2439
MaeII ACGT 2 cut(s) 276, 1082
MaeIII GTNAC 9 cut(s) 272, 813, 933, 1005, 1605, 1859, 1890, 2149, 2337
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 7 cut(s) 126, 392, 952, 1024, 1261, 1391, 1417
MhlI GDGCHC 2 cut(s) 1975, 2666
MlsI TGGCCA 1 cut(s) 80
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 2 cut(s) 1349, 2651
MmeI TCCRAC 1 cut(s) 351
Mox20I TGGCCA 1 cut(s) 80
MroXI GAANNNNTTC 1 cut(s) 870
MscI TGGCCA 1 cut(s) 80
MslI CAYNNNNRTG 2 cut(s) 16, 167
Msp20I TGGCCA 1 cut(s) 80
MspA1I CMGCKG 1 cut(s) 1538
MspI CCGG 2 cut(s) 1624, 1656
MspR9I CCNGG 1 cut(s) 1874
MunI CAATTG 1 cut(s) 54
MvaI CCWGG 1 cut(s) 1874
MwoI GCNNNNNNNGC 4 cut(s) 148, 234, 321, 1904
NcoI CCATGG 1 cut(s) 1547
NmeAIII GCCGAG 1 cut(s) 1911
NmuCI GTSAC 8 cut(s) 272, 813, 933, 1005, 1859, 1890, 2149, 2337
NspI RCATGY 2 cut(s) 172, 1588
PagI TCATGA 2 cut(s) 1167, 2155
PciI ACATGT 2 cut(s) 168, 1584
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 9 cut(s) 711, 1171, 1295, 2026, 2047, 2408, 2446, 2471, 2529
PflMI CCANNNNNTGG 1 cut(s) 73
PkrI GCNGC 5 cut(s) 141, 236, 1537, 1540, 2067
PleI GAGTC 2 cut(s) 1348, 2651
PmaCI CACGTG 1 cut(s) 277
PmlI CACGTG 1 cut(s) 277
PpsI GAGTC 2 cut(s) 1348, 2651
Ppu21I YACGTR 1 cut(s) 277
PscI ACATGT 2 cut(s) 168, 1584
PshAI GACNNNNGTC 1 cut(s) 493
PshBI ATTAAT 1 cut(s) 612
PsiI TTATAA 1 cut(s) 378
Psp6I CCWGG 1 cut(s) 1872
PspCI CACGTG 1 cut(s) 277
PspGI CCWGG 1 cut(s) 1872
PspPI GGNCC 6 cut(s) 920, 967, 1039, 2002, 2416, 2513
PstI CTGCAG 1 cut(s) 1537
PstNI CAGNNNCTG 3 cut(s) 234, 2458, 2516
PsuI RGATCY 7 cut(s) 126, 392, 952, 1024, 1261, 1391, 1417
PvuII CAGCTG 1 cut(s) 1538
RsaI GTAC 9 cut(s) 630, 927, 999, 1213, 1326, 1449, 1628, 2520, 2790
RsaNI GTAC 9 cut(s) 629, 926, 998, 1212, 1325, 1448, 1627, 2519, 2789
RseI CAYNNNNRTG 2 cut(s) 16, 167
SatI GCNGC 5 cut(s) 140, 235, 1536, 1539, 2066
Sau96I GGNCC 6 cut(s) 920, 967, 1039, 2002, 2416, 2513
ScaI AGTACT 1 cut(s) 2790
SchI GAGTC 2 cut(s) 1349, 2651
ScrFI CCNGG 1 cut(s) 1874
SduI GDGCHC 2 cut(s) 1975, 2666
SfaNI GCATC 3 cut(s) 420, 2052, 2382
SfcI CTRYAG 4 cut(s) 787, 1074, 1241, 1533
SinI GGWCC 5 cut(s) 920, 967, 1039, 2002, 2416
SmiMI CAYNNNNRTG 2 cut(s) 16, 167
SmlI CTYRAG 4 cut(s) 1395, 2242, 2278, 2386
SmoI CTYRAG 4 cut(s) 1395, 2242, 2278, 2386
SsiI CCGC 2 cut(s) 684, 2583
SspI AATATT 2 cut(s) 910, 2302
SspMI CTAG 9 cut(s) 408, 566, 1190, 1259, 1299, 1346, 1895, 2190, 2439
StyD4I CCNGG 1 cut(s) 1872
StyI CCWWGG 3 cut(s) 425, 1547, 2572
TaaI ACNGT 5 cut(s) 495, 628, 1216, 1324, 1868
TaiI ACGT 2 cut(s) 279, 1085
TaqI TCGA 2 cut(s) 487, 2251
TatI WGTACW 2 cut(s) 1324, 2788
TfiI GAWTC 9 cut(s) 711, 1171, 1295, 2026, 2047, 2408, 2446, 2471, 2529
TscAI CASTG 3 cut(s) 885, 1748, 1765
TseFI GTSAC 8 cut(s) 272, 813, 933, 1005, 1859, 1890, 2149, 2337
TseI GCWGC 5 cut(s) 139, 234, 1535, 1538, 2065
Tsp45I GTSAC 8 cut(s) 272, 813, 933, 1005, 1859, 1890, 2149, 2337
TspRI CASTG 3 cut(s) 885, 1748, 1765
Van91I CCANNNNNTGG 1 cut(s) 73
VpaK11BI GGWCC 5 cut(s) 920, 967, 1039, 2002, 2416
VspI ATTAAT 1 cut(s) 612
XapI RAATTY 8 cut(s) 574, 646, 727, 1562, 1753, 1989, 2611, 2687
XbaI TCTAGA 1 cut(s) 1298
XceI RCATGY 2 cut(s) 172, 1588
XmnI GAANNNNTTC 1 cut(s) 870
XspI CTAG 9 cut(s) 408, 566, 1190, 1259, 1299, 1346, 1895, 2190, 2439
ZrmI AGTACT 1 cut(s) 2790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.