MD09G1124700.v1.1

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
9639528 .. 9644361
4834 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1124700.v1.1.491

Sequence Viewer

Length: 3111 bp
ATGCCTTTCGTTCACCACCACCCGTTGATGAGGACGATTCCTTCCCGCGGGTTTCGTCTTTCCGGATTTTCTCCATCTGGGTCTTCCGGTCATGTTGCGGCGGAGGCGGCTACACCTAAGACTAAGGGCACGAGCACAGAGAGCTCTCGATCTCGATCCCTCCTCATGAGCCAGTCGAAAACTCAGCTTCCGGTCCAGGAAATTTTCAGCATGTTTCTAGAGGATTCTCAAGATCAGGGCACTCAGACACACACACTTTGCCACGCTGACGAGCAATCATTCTTGTTACAATTCAAGGAAAGCTTTACGATAGACAAGTCAGCTTCTTCATCTCCTTTTGCTTATCTGAAGGTTGCATCTTGGGCTCAAGAAGGAGATCAAAATCAGAGTAACTGTTGTTCGTGGGATGGTGTTGAGTGCCATGCGGAGTCTGGCCGTGTCATTGGCCTCGACCTCAAGAGCAGCTGTCTTTATGGTTCTATCAATTCCAGCAGCACCCTTTTCCAACTTGTTCACTTGCAAATGCTTGACCTCTCAGATAACAACTTTAATTCCTCTGAAATACCATCAAGATTGGGCCATGACCTATCGAATCTGTCTTATCTCAACCTTTCACGGTCTGCATTTTCTGGCCAAATTCCATCTGAAATTTCAAAGCTATCCAAACTGTCTACCCTTGTTCTGTCTTACAATAATGGTTTGGAGCTTAGGAAGTCCATCCTGAGAATCCTAGTCCAAAACTTGACCAGCATAAAACAACTTCATCTTAGTCATGTAGGCATATACTCCACTGTGCCTGATATCTTGGTCAATGCATCTTTTCTCACATCTCTCAACCTAAGCTACTGTGGGTTGTATGGGGAATTCCCAGTAGGCATTTTCCACCTACCAAACCTAGAGGAGCTCAGTTTATACTCGAACATAAAGCTAAATGGTTATTTTCCTCCTTTCAACAGGACCAATTCTTTCAAAACATTGGTTGTTTCAATGACAAATTTCTCTGGTGAACTTCCTAGTTCTATCGGAAACCTTCATTCCTTAAATTACCTTGATATCTCAAACTGTGGTTTTGATTCCCATGTTCCATTTTCTTTGGGAAACCTTACCCAGCTCAGTTTCCTTAAGATGACTTCATTTCATAACGTTTCCGCAGGCCAATTCATAGTTTCCAATTCCTTGTCCTATTTTGGAAAACTAACCAAGCTCAACCACTTGGATCTTTCGGGTATTAACTTACAGGGAAATTTCCCACGTTTTGTGGCTAACCTGACCCAACTTGCGTTTCTAGATTTATCTGCCAATACATTAACTGGTGAAATCCCATCTTGGCTTGCAGTAGAGTCGACCCAATTAACTTTTCTGCATCTCAGCTTCAACGAATTGCAAGGAGCAGTTCCTAAGTCGCTTTTCCACCTCAGAAATCTTGAATATCTTGGCCTTTCCTCTAATAATTTGAGTGGATTAGTTGAGTTTGATGAGTTTTCCAACCTCAAAAAGTTGAAGATACTTGGTTTATCGTACAACAGGTTATCCGTGCGTGTCAAATCTGGTTCGAGTGATACTCTTCCAAAGTTCGAATTTCTAAGGTTGGCTGCTTGTAACTTGACAGAATTTCCAGAATTTTTGAAAAATCAATATGAATTGGGAGCCCTAGAACTTTCTGGTAACAATATTCATGGCCAAATACCAAAATGGGTCTGGAATGCAACTAGAGAAACTTTGGTCAATCTCGACCTCGATCATAACTTCTTAACAGGCTTTGAGGGAAATCCAGTCACTCTTCCATGGAAAAATCTGCAGGTTTTTAATCTTGAGAATAATCGGTTACAAGGGTCATTGCCAATTCCACCACAATCTATCATGTCTTACATTGTCAGCATCAATAATTATAGTGGAGAAGTTTTACCATTGTTCTGCGACTTGAATTATCTTCAAGTTCTTAGTTTGGCCAACAACAATCTGAGTGGCATGCTTCCAGAGTGTTTGGGGAAGTCCAATAGCTTGGAAATACTGCAATTGATGTTTAATTCTATCCACGGCGATATTCCTCCATTTTGTGCTAACAAAAATAATTTGAAATTGGTTGGGTTGGGTTACAATCGGTTACAGGGGAAGCTACCAAGATCAATGGCCGATTGCACTCGGTTAGAGTTTCTTGACATTGGCAACAATCAGATCAGTGACATCTTCCCTTCTTGGTTAGGGGTACTTCCAGTATTGAGGGGTCTCATTTTGGGGTCGAATGCATTTCATGGGATAATTGGGAAGCCTCCAACTAATCATGAGTTCCCAAACTTGTGCATCATTGATTTATCCAACAATCTGTTTTCAGGTATGTTGCCTTCTATGTACATGGAGAACTGGAATTTCATGAAATATGTTGTCGCAAACAAGGGAAGCCGGTACTTTAGAATCTCTTCGAACGTCAGCACAAATAAATATGGAGATTACTATCAAATTTCTTACAATATGATAATTCCTGTAAAAGGTGTTGAATTGACATATGATAAGACCCCCTATAATCTGAGACTCATAGATTTCTCAAGTAATAGATTTGAAGGAGAGATTCCAGCAAGTATCATTAGGAGTCTAAGAGAACTTCAGTTGCTAAACCTCTCCAACAACGCTCTCTCTGGTCACATCCCCTCATCTCTTGGGAACTTGATTGCTCTTGAATCGTTGGATCTCTCTCAAAACAAGCTCTCAGGAAGGATCCCCAGTAGTTTGGCACAACTCACTTTCCTTGAGTACTTCAATGTGTCGCATAACCATCTTTGGGGGCCTATACCACTTGGCCAACAATTTGGTACATTCCTAGAAGATTCATACCAAGGAAACTCAGGTTTGTGTGGAAAGCCTTTGTCCAAGAAATGTGAGGGTTCTGAGATCTCGAGGCTGCCGCCACCATCAAGCTTTGAAGAAGATGAAGAGGCTGGATCTCCATTTGAGTTTGACTGGTATGTAGTCTTGCCAGGAGTTGTTAGCGGACTAATAGTGGGAGTGGTTGCTGGAAACACATTGGCAGACAAGAAGCATGAATGGTTTGTGGAGACATTCAGCAGGAGGAGGAAGCCAAGAACCGCAAGGGTGACGAGGGGACGCCGAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1037

Amino Acids

115.18

Weight (kDa)

6.63

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 89 - 140 1.3e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 150 - 277 2.3e-07 Leucine-rich repeat region
LRR_14 PF23598 330 - 382 4.4e-06 Leucine-rich repeat region
LRR_14 PF23598 390 - 579 6e-10 Leucine-rich repeat region
LRR_8 PF13855 450 - 510 3e-08 Leucine rich repeat
LRR_14 PF23598 842 - 922 4.6e-06 Leucine-rich repeat region
LRR_8 PF13855 865 - 925 8.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1789
AccI GTMKAC 2 cut(s) 671, 1343
AccII CGCG 1 cut(s) 48
AccIII TCCGGA 1 cut(s) 62
AclI AACGTT 1 cut(s) 1143
AclWI GGATC 6 cut(s) 150, 1224, 2691, 2707, 2720, 2944
AcoI YGGCCR 6 cut(s) 433, 631, 1678, 1947, 2130, 2794
AcuI CTGAAG 2 cut(s) 368, 2585
AcyI GRCGYC 1 cut(s) 3100
AfaI GTAC 6 cut(s) 1520, 2208, 2351, 2405, 2750, 2809
AfiI CCNNNNNNNGG 3 cut(s) 47, 2486, 2776
AflII CTTAAG 1 cut(s) 1121
AjnI CCWGG 2 cut(s) 195, 2971
AjuI GAANNNNNNNTTGG 4 cut(s) 1266, 1298, 1341, 1373
Alw21I GWGCWC 3 cut(s) 137, 146, 906
Alw26I GTCTC 3 cut(s) 2231, 2521, 3044
AlwI GGATC 6 cut(s) 150, 1224, 2691, 2707, 2720, 2944
Ama87I CYCGRG 1 cut(s) 2890
Aor13HI TCCGGA 1 cut(s) 62
ApeKI GCWGC 4 cut(s) 462, 492, 1592, 2896
Asp700I GAANNNNTTC 1 cut(s) 2416
AspS9I GGNCC 4 cut(s) 193, 577, 957, 2780
AsuHPI GGTGA 4 cut(s) 5, 1016, 1325, 3100
AsuII TTCGAA 2 cut(s) 1575, 2420
AvaI CYCGRG 1 cut(s) 2890
AvaII GGWCC 2 cut(s) 193, 957
BaeGI GKGCMC 2 cut(s) 131, 242
BalI TGGCCA 4 cut(s) 633, 1680, 1949, 2796
BamHI GGATCC 1 cut(s) 2712
BanII GRGCYC 4 cut(s) 146, 367, 906, 1651
BarI GAAGNNNNNNTAC 2 cut(s) 2326, 2358
BauI CACGAG 1 cut(s) 130
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 3 cut(s) 137, 146, 906
BbvI GCAGC 4 cut(s) 474, 504, 1579, 2883
BccI CCATC 8 cut(s) 82, 401, 574, 649, 725, 1330, 2778, 2914
BceAI ACGGC 2 cut(s) 420, 2053
BcgI CGANNNNNNTGC 2 cut(s) 1323, 1357
BciT130I CCWGG 2 cut(s) 197, 2973
BcoDI GTCTC 3 cut(s) 2231, 2521, 3044
BfaI CTAG 8 cut(s) 218, 731, 896, 1014, 1286, 1652, 1710, 2816
BfmI CTRYAG 1 cut(s) 1796
BfrI CTTAAG 1 cut(s) 1121
BfuAI ACCTGC 1 cut(s) 1789
BglII AGATCT 1 cut(s) 2886
BisI GCNGC 7 cut(s) 99, 108, 463, 493, 1593, 2897, 2900
BlsI GCNGC 7 cut(s) 100, 109, 464, 494, 1594, 2898, 2901
BmcAI AGTACT 1 cut(s) 2750
Bme1390I CCNGG 2 cut(s) 197, 2973
Bme18I GGWCC 2 cut(s) 193, 957
BmeT110I CYCGRG 1 cut(s) 2890
BmgT120I GGNCC 4 cut(s) 193, 577, 957, 2780
BmiI GGNNCC 3 cut(s) 1648, 2714, 2781
BmrFI CCNGG 2 cut(s) 197, 2973
BmrI ACTGGG 2 cut(s) 863, 2712
BmsI GCATC 5 cut(s) 365, 824, 1372, 1887, 2310
BmuI ACTGGG 2 cut(s) 863, 2712
BpiI GAAGAC 1 cut(s) 75
BplI GAGNNNNNCTC 2 cut(s) 1546, 1578
Bpu10I CCTNAGC 2 cut(s) 707, 839
Bpu14I TTCGAA 2 cut(s) 1575, 2420
BpuEI CTTGAG 6 cut(s) 213, 351, 440, 1832, 2527, 2765
BsaBI GATNNNNATC 3 cut(s) 154, 381, 2451
BsaHI GRCGYC 1 cut(s) 3100
BsaI GGTCTC 1 cut(s) 2231
BsaJI CCNNGG 4 cut(s) 46, 1784, 2035, 2830
BsaWI WCCGGW 3 cut(s) 62, 86, 190
Bsc4I CCNNNNNNNGG 3 cut(s) 47, 2486, 2776
Bse118I RCCGGY 1 cut(s) 2400
Bse1I ACTGG 8 cut(s) 172, 869, 1315, 1772, 2213, 2366, 2718, 2960
Bse3DI GCAATG 1 cut(s) 1835
Bse8I GATNNNNATC 3 cut(s) 154, 381, 2451
BseAI TCCGGA 1 cut(s) 62
BseBI CCWGG 2 cut(s) 197, 2973
BseDI CCNNGG 4 cut(s) 46, 1784, 2035, 2830
BseGI GGATG 3 cut(s) 412, 717, 2640
BseJI GATNNNNATC 3 cut(s) 154, 381, 2451
BseLI CCNNNNNNNGG 3 cut(s) 47, 2486, 2776
BseMI GCAATG 1 cut(s) 1835
BseNI ACTGG 8 cut(s) 172, 869, 1315, 1772, 2213, 2366, 2718, 2960
BseRI GAGGAG 3 cut(s) 152, 914, 3079
BseSI GKGCMC 2 cut(s) 131, 242
BseXI GCAGC 4 cut(s) 474, 504, 1579, 2883
BseYI CCCAGC 1 cut(s) 1107
Bsh1236I CGCG 1 cut(s) 48
BsiHKAI GWGCWC 3 cut(s) 137, 146, 906
BsiHKCI CYCGRG 1 cut(s) 2890
BsiSI CCGG 4 cut(s) 63, 87, 191, 2401
BslI CCNNNNNNNGG 3 cut(s) 47, 2486, 2776
BsmAI GTCTC 3 cut(s) 2231, 2521, 3044
BsmI GAATGC 2 cut(s) 1708, 2248
Bso31I GGTCTC 1 cut(s) 2231
BsoBI CYCGRG 1 cut(s) 2890
Bsp119I TTCGAA 2 cut(s) 1575, 2420
Bsp1286I GDGCHC 7 cut(s) 131, 137, 146, 242, 367, 906, 1651
Bsp13I TCCGGA 1 cut(s) 62
Bsp1407I TGTACA 1 cut(s) 2349
Bsp19I CCATGG 1 cut(s) 1784
BspEI TCCGGA 1 cut(s) 62
BspFNI CGCG 1 cut(s) 48
BspHI TCATGA 3 cut(s) 165, 2281, 2370
BspLI GGNNCC 3 cut(s) 1648, 2714, 2781
BspMAI CTGCAG 1 cut(s) 1800
BspMI ACCTGC 1 cut(s) 1789
BspPI GGATC 6 cut(s) 150, 1224, 2691, 2707, 2720, 2944
BspT104I TTCGAA 2 cut(s) 1575, 2420
BspTI CTTAAG 1 cut(s) 1121
BspTNI GGTCTC 1 cut(s) 2231
BsrDI GCAATG 1 cut(s) 1835
BsrFI RCCGGY 1 cut(s) 2400
BsrGI TGTACA 1 cut(s) 2349
BsrI ACTGG 8 cut(s) 172, 869, 1315, 1772, 2213, 2366, 2718, 2960
BssAI RCCGGY 1 cut(s) 2400
BssECI CCNNGG 4 cut(s) 46, 1784, 2035, 2830
BssNI GRCGYC 1 cut(s) 3100
BssSI CACGAG 1 cut(s) 130
BssT1I CCWWGG 2 cut(s) 1784, 2830
Bst2BI CACGAG 1 cut(s) 130
Bst2UI CCWGG 2 cut(s) 197, 2973
Bst4CI ACNGT 6 cut(s) 395, 618, 669, 793, 848, 1064
Bst6I CTCTTC 4 cut(s) 1569, 1785, 2422, 2922
BstACI GRCGYC 1 cut(s) 3100
BstAFI CTTAAG 1 cut(s) 1121
BstAUI TGTACA 1 cut(s) 2349
BstBI TTCGAA 2 cut(s) 1575, 2420
BstC8I GCNNGC 3 cut(s) 1153, 1332, 1970
BstDSI CCRYGG 3 cut(s) 46, 1784, 2035
BstENI CCTNNNNNAGG 1 cut(s) 2484
BstF5I GGATG 3 cut(s) 412, 717, 2640
BstFNI CGCG 1 cut(s) 48
BstMAI GTCTC 3 cut(s) 2231, 2521, 3044
BstMWI GCNNNNNNNGC 4 cut(s) 104, 107, 141, 362
BstNI CCWGG 2 cut(s) 197, 2973
BstNSI RCATGY 2 cut(s) 214, 1972
BstSCI CCNGG 2 cut(s) 195, 2971
BstSFI CTRYAG 1 cut(s) 1796
BstSLI GKGCMC 2 cut(s) 131, 242
BstUI CGCG 1 cut(s) 48
BstV1I GCAGC 4 cut(s) 474, 504, 1579, 2883
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 5 cut(s) 1216, 2683, 2712, 2886, 2936
BstXI CCANNNNNNTGG 3 cut(s) 2002, 2725, 2804
BstYI RGATCY 5 cut(s) 1216, 2683, 2712, 2886, 2936
BtgI CCRYGG 3 cut(s) 46, 1784, 2035
BtsCI GGATG 3 cut(s) 412, 717, 2640
BtsIMutI CAGTG 2 cut(s) 789, 2185
BveI ACCTGC 1 cut(s) 1789
Cac8I GCNNGC 3 cut(s) 1153, 1332, 1970
CciI TCATGA 3 cut(s) 165, 2281, 2370
Cfr10I RCCGGY 1 cut(s) 2400
Cfr13I GGNCC 4 cut(s) 193, 577, 957, 2780
Cfr42I CCGCGG 1 cut(s) 49
Csp6I GTAC 6 cut(s) 1519, 2207, 2350, 2404, 2749, 2808
CspCI CAANNNNNGTGG 2 cut(s) 1945, 1980
CviQI GTAC 6 cut(s) 1519, 2207, 2350, 2404, 2749, 2808
EaeI YGGCCR 6 cut(s) 433, 631, 1678, 1947, 2130, 2794
Eam1104I CTCTTC 4 cut(s) 1569, 1785, 2422, 2922
EarI CTCTTC 4 cut(s) 1569, 1785, 2422, 2922
EciI GGCGGA 1 cut(s) 116
Ecl136II GAGCTC 2 cut(s) 144, 904
Eco130I CCWWGG 2 cut(s) 1784, 2830
Eco24I GRGCYC 4 cut(s) 146, 367, 906, 1651
Eco31I GGTCTC 1 cut(s) 2231
Eco32I GATATC 2 cut(s) 802, 1054
Eco47I GGWCC 2 cut(s) 193, 957
Eco53kI GAGCTC 2 cut(s) 144, 904
Eco57I CTGAAG 2 cut(s) 368, 2585
Eco88I CYCGRG 1 cut(s) 2890
EcoICRI GAGCTC 2 cut(s) 144, 904
EcoNI CCTNNNNNAGG 1 cut(s) 2484
EcoO109I RGGNCCY 1 cut(s) 2780
EcoRI GAATTC 1 cut(s) 863
EcoRII CCWGG 2 cut(s) 195, 2971
EcoRV GATATC 2 cut(s) 802, 1054
EcoT14I CCWWGG 2 cut(s) 1784, 2830
EcoT22I ATGCAT 2 cut(s) 817, 2248
EcoT38I GRGCYC 4 cut(s) 146, 367, 906, 1651
ErhI CCWWGG 2 cut(s) 1784, 2830
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FauI CCCGC 2 cut(s) 41, 53
FauNDI CATATG 1 cut(s) 2503
FblI GTMKAC 2 cut(s) 671, 1343
Fnu4HI GCNGC 7 cut(s) 99, 108, 463, 493, 1593, 2897, 2900
FokI GGATG 3 cut(s) 419, 704, 2627
FriOI GRGCYC 4 cut(s) 146, 367, 906, 1651
Fsp4HI GCNGC 7 cut(s) 99, 108, 463, 493, 1593, 2897, 2900
FspBI CTAG 8 cut(s) 218, 731, 896, 1014, 1286, 1652, 1710, 2816
GluI GCNGC 7 cut(s) 99, 108, 463, 493, 1593, 2897, 2900
GsaI CCCAGC 1 cut(s) 1111
HapII CCGG 4 cut(s) 63, 87, 191, 2401
Hin1I GRCGYC 1 cut(s) 3100
HincII GTYRAC 1 cut(s) 1344
HindII GTYRAC 1 cut(s) 1344
HindIII AAGCTT 2 cut(s) 301, 2911
HpaII CCGG 4 cut(s) 63, 87, 191, 2401
HphI GGTGA 4 cut(s) 5, 1016, 1325, 3100
Hpy166II GTNNAC 5 cut(s) 13, 514, 672, 1007, 1344
Hpy8I GTNNAC 5 cut(s) 13, 514, 672, 1007, 1344
HpyAV CCTTC 8 cut(s) 51, 343, 365, 1040, 2202, 2352, 2552, 2703
HpyCH4III ACNGT 6 cut(s) 395, 618, 669, 793, 848, 1064
HpyCH4IV ACGT 3 cut(s) 1143, 1252, 2424
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 107, 141, 362
HpySE526I ACGT 3 cut(s) 1143, 1252, 2424
Hsp92I GRCGYC 1 cut(s) 3100
Kpn2I TCCGGA 1 cut(s) 62
KspI CCGCGG 1 cut(s) 49
LmnI GCTCC 4 cut(s) 703, 901, 1388, 1646
Lsp1109I GCAGC 4 cut(s) 474, 504, 1579, 2883
LweI GCATC 5 cut(s) 365, 824, 1372, 1887, 2310
MaeI CTAG 8 cut(s) 218, 731, 896, 1014, 1286, 1652, 1710, 2816
MaeII ACGT 3 cut(s) 1143, 1252, 2424
MfeI CAATTG 1 cut(s) 2015
MflI RGATCY 5 cut(s) 1216, 2683, 2712, 2886, 2936
MhlI GDGCHC 7 cut(s) 131, 137, 146, 242, 367, 906, 1651
MlsI TGGCCA 4 cut(s) 633, 1680, 1949, 2796
MluNI TGGCCA 4 cut(s) 633, 1680, 1949, 2796
MlyI GAGTC 4 cut(s) 437, 1349, 2523, 2596
MmeI TCCRAC 6 cut(s) 529, 1509, 2297, 2340, 2643, 2661
Mox20I TGGCCA 4 cut(s) 633, 1680, 1949, 2796
Mph1103I ATGCAT 2 cut(s) 817, 2248
MroI TCCGGA 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 2416
MscI TGGCCA 4 cut(s) 633, 1680, 1949, 2796
MseI TTAA 9 cut(s) 549, 1040, 1122, 1230, 1307, 1352, 1751, 1806, 2025
Msp20I TGGCCA 4 cut(s) 633, 1680, 1949, 2796
MspA1I CMGCKG 2 cut(s) 48, 465
MspCI CTTAAG 1 cut(s) 1121
MspI CCGG 4 cut(s) 63, 87, 191, 2401
MspR9I CCNGG 2 cut(s) 197, 2973
MunI CAATTG 1 cut(s) 2015
Mva1269I GAATGC 2 cut(s) 1708, 2248
MvaI CCWGG 2 cut(s) 197, 2973
MvnI CGCG 1 cut(s) 48
MwoI GCNNNNNNNGC 4 cut(s) 104, 107, 141, 362
NcoI CCATGG 1 cut(s) 1784
NdeI CATATG 1 cut(s) 2503
NlaIV GGNNCC 3 cut(s) 1648, 2714, 2781
NmuCI GTSAC 4 cut(s) 1774, 2180, 2636, 3088
NsiI ATGCAT 2 cut(s) 817, 2248
NspI RCATGY 2 cut(s) 214, 1972
NspV TTCGAA 2 cut(s) 1575, 2420
PaeI GCATGC 1 cut(s) 1972
PaeR7I CTCGAG 1 cut(s) 2890
PagI TCATGA 3 cut(s) 165, 2281, 2370
PctI GAATGC 2 cut(s) 1708, 2248
PdmI GAANNNNTTC 1 cut(s) 2416
PfeI GAWTC 9 cut(s) 37, 224, 592, 726, 1073, 2412, 2566, 2675, 2822
PfoI TCCNGGA 1 cut(s) 195
PkrI GCNGC 7 cut(s) 100, 109, 464, 494, 1594, 2898, 2901
PleI GAGTC 4 cut(s) 436, 1348, 2523, 2595
PpsI GAGTC 4 cut(s) 436, 1348, 2523, 2595
Psp124BI GAGCTC 2 cut(s) 146, 906
Psp1406I AACGTT 1 cut(s) 1143
Psp6I CCWGG 2 cut(s) 195, 2971
PspFI CCCAGC 1 cut(s) 1107
PspGI CCWGG 2 cut(s) 195, 2971
PspN4I GGNNCC 3 cut(s) 1648, 2714, 2781
PspPI GGNCC 4 cut(s) 193, 577, 957, 2780
PsrI GAACNNNNNNTAC 2 cut(s) 382, 414
PstI CTGCAG 1 cut(s) 1800
PsuI RGATCY 5 cut(s) 1216, 2683, 2712, 2886, 2936
PvuII CAGCTG 1 cut(s) 465
RsaI GTAC 6 cut(s) 1520, 2208, 2351, 2405, 2750, 2809
RsaNI GTAC 6 cut(s) 1519, 2207, 2350, 2404, 2749, 2808
SacI GAGCTC 2 cut(s) 146, 906
SacII CCGCGG 1 cut(s) 49
SalI GTCGAC 1 cut(s) 1342
SaqAI TTAA 9 cut(s) 549, 1040, 1122, 1230, 1307, 1352, 1751, 1806, 2025
SatI GCNGC 7 cut(s) 99, 108, 463, 493, 1593, 2897, 2900
Sau96I GGNCC 4 cut(s) 193, 577, 957, 2780
ScaI AGTACT 1 cut(s) 2750
SchI GAGTC 4 cut(s) 437, 1349, 2523, 2596
ScrFI CCNGG 2 cut(s) 197, 2973
SduI GDGCHC 7 cut(s) 131, 137, 146, 242, 367, 906, 1651
SfaNI GCATC 5 cut(s) 365, 824, 1372, 1887, 2310
SfcI CTRYAG 1 cut(s) 1796
Sfr274I CTCGAG 1 cut(s) 2890
Sfr303I CCGCGG 1 cut(s) 49
SfuI TTCGAA 2 cut(s) 1575, 2420
SgrBI CCGCGG 1 cut(s) 49
SinI GGWCC 2 cut(s) 193, 957
SlaI CTCGAG 1 cut(s) 2890
SmlI CTYRAG 8 cut(s) 228, 366, 455, 1121, 1811, 2542, 2744, 2890
SmoI CTYRAG 8 cut(s) 228, 366, 455, 1121, 1811, 2542, 2744, 2890
SphI GCATGC 1 cut(s) 1972
SspI AATATT 1 cut(s) 1672
SspMI CTAG 8 cut(s) 218, 731, 896, 1014, 1286, 1652, 1710, 2816
SstI GAGCTC 2 cut(s) 146, 906
StyD4I CCNGG 2 cut(s) 195, 2971
StyI CCWWGG 2 cut(s) 1784, 2830
TaaI ACNGT 6 cut(s) 395, 618, 669, 793, 848, 1064
TaiI ACGT 3 cut(s) 1146, 1255, 2427
TatI WGTACW 2 cut(s) 2349, 2748
TauI GCSGC 3 cut(s) 101, 110, 2902
TfiI GAWTC 9 cut(s) 37, 224, 592, 726, 1073, 2412, 2566, 2675, 2822
Tru1I TTAA 9 cut(s) 549, 1040, 1122, 1230, 1307, 1352, 1751, 1806, 2025
Tru9I TTAA 9 cut(s) 549, 1040, 1122, 1230, 1307, 1352, 1751, 1806, 2025
TscAI CASTG 2 cut(s) 796, 2185
TseFI GTSAC 4 cut(s) 1774, 2180, 2636, 3088
TseI GCWGC 4 cut(s) 462, 492, 1592, 2896
Tsp45I GTSAC 4 cut(s) 1774, 2180, 2636, 3088
TspGWI ACGGA 1 cut(s) 1522
TspRI CASTG 2 cut(s) 796, 2185
Vha464I CTTAAG 1 cut(s) 1121
VpaK11BI GGWCC 2 cut(s) 193, 957
XagI CCTNNNNNAGG 1 cut(s) 2484
XbaI TCTAGA 2 cut(s) 217, 1285
XceI RCATGY 2 cut(s) 214, 1972
XcmI CCANNNNNNNNNTGG 2 cut(s) 428, 1695
XhoI CTCGAG 1 cut(s) 2890
XmiI GTMKAC 2 cut(s) 671, 1343
XmnI GAANNNNTTC 1 cut(s) 2416
XspI CTAG 8 cut(s) 218, 731, 896, 1014, 1286, 1652, 1710, 2816
ZrmI AGTACT 1 cut(s) 2750
Zsp2I ATGCAT 2 cut(s) 817, 2248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.