Rh1AG206800

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000024
Physical Location & Seq
Reverse (-)
39137698 .. 39140747
3050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG206800.1

Sequence Viewer

Length: 2661 bp
ATGGAGTTACGCCAGTGCTTATATATATTATTTATATTTTTCATCAAGGGGGGTGACACGAAGTCTTTCCAAGAGCCATCTTGCCACGAGGAAGAGAGCACCGCCTTGCTGCAATTTAAGCAAAGCTTTACTATTGACACCTCAGCTTCTGCTTCTGGTTATGATGGTGCTTACTCAAAGGTCTCATCATGGCAAACGGCTGAAGGAGAAACTAGCAACTGCTGCTCATGGGACGGCATTGGTTGTGATGAGAGGACTGGTCGTGTGATTGACATAGATCTTAGTAGCAGTTATCTCTATGGGAACCTCAACTCCAACAGCACCCTCTTTCGTCTTGTTCATCTCCAGAGGCTGAACCTTGCTGACAACAACTTCAATCACTCTCAAATTCCTATTACACTTCGGAATTTTCCGAGGCTCAGGTATCTCAACCTTTCGTCCTCTGTCTTTTCTGGCCATGTACCATCCGAAGTTTCACAATTGTCCAAATTGTCATCCCTTGACCTGTCTGCCAATACACTTTCGAGTCAGGGACTGTTGAAACTAGCAGCATCCAATCTGGCAGGTCTAGTTCAAAACTTAACTAGTCTTGAAGCACTTTATCTCAGTGGCATTAACATATCTTCGAGAATTCCTGATTCCATGGGAAATTTATCATTTTTGACATCCCTCGCTCTGAGGAATTGTGAGTTGTTTGGTCAATTCCCAACTAGAATTTTCAAGTTGCAGAATTTAAAATTTTTCAGTGTGAGATTCAACCACGAGCTCTCTGGTTATCTACCTGAATTCAATCAAAGCAGTCCACTGACCAGAATGATACTTGCCGGCACTAATTTTTCGGGAAACCTGCCTTCATCAATTGGAAAGCTTGATTCATTGAAAGACTTGGATGTGGGTGCATGCAGATTCTCCGGGATGCTTCCTTTTTCACTTGGTAATCTTAAACAGCTAAATTATTTAGACCTTTCAACTAACACATTTAGTGGTCCAATTCCTGCTTCACTGGCAAACCTTACCCAACTCACATATTTGTCACTCGCAACAAATAATTTTGTTCGAGGTCCCTCATTTTGGGTTGGTAAGCAAACCAAACTTACTTTTCTCGACCTCGAAAGCATTAATTTAAATGGTTCTATCCCATCTTCTCTTAGTAACTTCACACAGCTCACTTATCTTTCTCTTAGATCTAATCAACTAAGTGGTCCAATCCCATCTTGGCTAGGTAACCTTAGCAAACTAGTCACCATAGATTTTGTTGTGAACAGTTTGAAGGGTTCAGTTCCTTTATCATTATTCGATCTTATGGAGCTCGAGCAGCTGTCTCTATCTGTGAATGAGCTACATGGGAACGTGGACTTTTGTAAGCTACAAAGTGTCATGAAAGTCCTCCAACTCGGTGGTAACAAACTCGAAGTGCTCACTGAATGTGGAATGAAGAATACAACCACATTTCCACAGCTCAGTTATCTAGGATTGAGTTCGTGCAACATAAAAGAGTTTCCACATTTCCTAATGCATCAACAAAGCTTGAGGTGGTTGGACCTTTCTTTGAACAAATTGCGTGGTCAAATACCAAAATGGATGTGGAATACAAGCACGCAAAGTTTGGCTTTCCTGAACATCAAGCAAAACTTCCTTTCAGGCTTTGGCCAACCAACTCTTGTCCTTCCTTGGGTTAACCTACAAGCTTTATTTGCTGCGGGTAACCTGCTAATTGGATCACTACCCATACCTCCAGAATACATTGTATACTATTCAGTAAGTGACAACAAACTTACAGGAGAAATTTCGCCATCAATTTGCAAGCTGAGATCTCTTCAATACCTTGACTTATCAAATAACAAGTTAAGTGGCACCATTCCGCAATGTCTTGGAAACTTTAGTGATGATCTACGAGTTTTGAATCTTCGAAACAACTCTTTACAAGGCATTCTTCCGCAACCATACAGCAATGCAAGCAACTTGAGGATGATAGACGTTAGTTACAACCAATTCCACGGGCAATTACCGAGGTCATTGGCGAATTGTGCGATGCTCGACTCTCTTGTTCTATCCAATAATGAGTTCAACGATGATTTCCCCATCTGGTTGGGAATGCTCCCAGATTTGAAACTTTTGGCAATGAACCATAATGAGTTCAACGGTGTGATCAAGAATAGCACAAAAAATCATCATTTTCCCGAGTTGCTCATTCTTGATCTGTCTCACAATAGTTTCAGAGGTGAGTTTCCATCAGTCATCTTTTCTGGAAATGCCATGAGAGGTATAGCTCAGAGCCAACCAACATATATGGATACAAGTTCAGCACTCAATATCCCTGGTGCACCTTTGTTTGGTTATGGTTTCTCAATGACAATTACCAATAAAGGTGTGGAGAGATACTACGAGAAGATTCGTGAAGACCTTGGGTTTGTTGATATTTCAAGCAACAAATTTGAAGGAAAGATTCCAGGATTTATTGGGAACCTGAAAGGGCTTCGGTTTCTCAATATTTCCCATAACATTTTCAGTGGGTCCATCCCATCATCTTTGGGTAACTTAATACTGCTCGAGTCATTGGACCTGCATGTCACTATTAGAAGCTACAAAAAAAGTCTTCCTTGTTTTAAGGCTCCTTGTCTTCCTCTCCTTGTTTTAAGGCTTTTGTCTTCCTTGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

886

Amino Acids

98.22

Weight (kDa)

8.06

Isoelectric Point (pI)

39.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 83 1.8e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 274 - 348 7.5e-08 Leucine-rich repeat region
LRR_8 PF13855 292 - 351 6e-07 Leucine rich repeat
LRR_14 PF23598 335 - 447 4.5e-06 Leucine-rich repeat region
LRR_8 PF13855 631 - 688 6.7e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2567
Acc36I ACCTGC 4 cut(s) 554, 855, 1716, 2571
AccB1I GGYRCC 1 cut(s) 1853
AccI GTMKAC 1 cut(s) 1749
AciI CCGC 4 cut(s) 102, 1700, 1862, 1937
AclWI GGATC 1 cut(s) 1726
AcoI YGGCCR 2 cut(s) 454, 1648
AcuI CTGAAG 1 cut(s) 222
AfaI GTAC 1 cut(s) 462
AfiI CCNNNNNNNGG 3 cut(s) 1071, 1672, 2333
AhdI GACNNNNNGTC 1 cut(s) 61
AhlI ACTAGT 2 cut(s) 584, 1237
AjnI CCWGG 2 cut(s) 2317, 2449
AjuI GAANNNNNNNTTGG 4 cut(s) 982, 1014, 2048, 2080
AloI GAACNNNNNNTCC 2 cut(s) 296, 328
Alw21I GWGCWC 5 cut(s) 101, 768, 1311, 1419, 2326
Alw26I GTCTC 3 cut(s) 187, 1326, 2208
Alw44I GTGCAC 1 cut(s) 2322
AlwI GGATC 1 cut(s) 1726
AlwNI CAGNNNCTG 3 cut(s) 149, 352, 535
Ama87I CYCGRG 3 cut(s) 1310, 2180, 2549
AoxI GGCC 2 cut(s) 454, 1648
ApaLI GTGCAC 1 cut(s) 2322
ApeKI GCWGC 5 cut(s) 109, 222, 548, 1315, 1697
ArsI GACNNNNNNTTYG 2 cut(s) 2393, 2425
AseI ATTAAT 1 cut(s) 1119
Asp700I GAANNNNTTC 1 cut(s) 65
AspS9I GGNCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
AsuC2I CCSGG 1 cut(s) 913
AsuHPI GGTGA 3 cut(s) 65, 1234, 2234
AsuII TTCGAA 1 cut(s) 1909
AvaI CYCGRG 3 cut(s) 1310, 2180, 2549
AvaII GGWCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
BaeGI GKGCMC 1 cut(s) 2326
BalI TGGCCA 2 cut(s) 456, 1650
BanI GGYRCC 1 cut(s) 1853
BanII GRGCYC 2 cut(s) 768, 1311
BauI CACGAG 2 cut(s) 86, 761
BbsI GAAGAC 4 cut(s) 2406, 2588, 2612, 2640
Bbv12I GWGCWC 5 cut(s) 101, 768, 1311, 1419, 2326
BbvCI CCTCAGC 1 cut(s) 142
BbvI GCAGC 5 cut(s) 96, 209, 560, 1327, 1684
BceAI ACGGC 2 cut(s) 213, 250
BciT130I CCWGG 2 cut(s) 2319, 2451
BciVI GTATCC 1 cut(s) 2287
BclI TGATCA 1 cut(s) 2148
BcnI CCSGG 1 cut(s) 913
BcoDI GTCTC 3 cut(s) 187, 1326, 2208
BcuI ACTAGT 2 cut(s) 584, 1237
BfaI CTAG 8 cut(s) 213, 545, 569, 585, 711, 1220, 1238, 1469
BfuAI ACCTGC 4 cut(s) 554, 855, 1716, 2571
BfuI GTATCC 1 cut(s) 2287
BglII AGATCT 3 cut(s) 277, 1184, 1811
BisI GCNGC 5 cut(s) 110, 223, 549, 1316, 1698
BlsI GCNGC 5 cut(s) 111, 224, 550, 1317, 1699
Bme1390I CCNGG 3 cut(s) 913, 2319, 2451
Bme18I GGWCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
BmeRI GACNNNNNGTC 1 cut(s) 61
BmeT110I CYCGRG 3 cut(s) 1310, 2180, 2549
BmgT120I GGNCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
BmiI GGNNCC 6 cut(s) 305, 1063, 1855, 2465, 2515, 2613
BmrFI CCNGG 3 cut(s) 913, 2319, 2451
BmsI GCATC 4 cut(s) 560, 906, 1525, 2022
BpiI GAAGAC 4 cut(s) 2406, 2588, 2612, 2640
BpmI CTGGAG 2 cut(s) 329, 1719
Bpu10I CCTNAGC 3 cut(s) 142, 419, 1229
Bpu14I TTCGAA 1 cut(s) 1909
BpuEI CTTGAG 2 cut(s) 1549, 1984
BpuMI CCSGG 1 cut(s) 913
BsaI GGTCTC 1 cut(s) 187
BsaJI CCNNGG 7 cut(s) 413, 642, 1670, 1996, 2009, 2317, 2404
BsaXI ACNNNNNCTCC 2 cut(s) 296, 326
Bsc4I CCNNNNNNNGG 3 cut(s) 1071, 1672, 2333
Bse118I RCCGGY 1 cut(s) 824
Bse1I ACTGG 3 cut(s) 13, 262, 1008
Bse3DI GCAATG 3 cut(s) 1871, 1957, 2127
BseBI CCWGG 2 cut(s) 2319, 2451
BseDI CCNNGG 7 cut(s) 413, 642, 1670, 1996, 2009, 2317, 2404
BseGI GGATG 9 cut(s) 464, 494, 551, 665, 895, 921, 1587, 1974, 2517
BseLI CCNNNNNNNGG 3 cut(s) 1071, 1672, 2333
BseMI GCAATG 3 cut(s) 1871, 1957, 2127
BseMII CTCAG 7 cut(s) 156, 433, 619, 668, 1474, 1799, 2285
BseNI ACTGG 3 cut(s) 13, 262, 1008
BseSI GKGCMC 1 cut(s) 2326
BseXI GCAGC 5 cut(s) 96, 209, 560, 1327, 1684
BshFI GGCC 2 cut(s) 456, 1650
BshNI GGYRCC 1 cut(s) 1853
BsiHKAI GWGCWC 5 cut(s) 101, 768, 1311, 1419, 2326
BsiHKCI CYCGRG 3 cut(s) 1310, 2180, 2549
BsiSI CCGG 2 cut(s) 825, 912
BslFI GGGAC 3 cut(s) 245, 546, 1047
BslI CCNNNNNNNGG 3 cut(s) 1071, 1672, 2333
BsmAI GTCTC 3 cut(s) 187, 1326, 2208
BsmFI GGGAC 3 cut(s) 245, 546, 1047
BsmI GAATGC 2 cut(s) 1929, 2100
BsnI GGCC 2 cut(s) 456, 1650
Bso31I GGTCTC 1 cut(s) 187
BsoBI CYCGRG 3 cut(s) 1310, 2180, 2549
Bsp119I TTCGAA 1 cut(s) 1909
Bsp1286I GDGCHC 5 cut(s) 101, 768, 1311, 1419, 2326
Bsp143I GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 4 cut(s) 102, 1700, 1862, 1937
BspANI GGCC 2 cut(s) 456, 1650
BspCNI CTCAG 7 cut(s) 155, 432, 618, 669, 1473, 1800, 2284
BspHI TCATGA 1 cut(s) 1377
BspLI GGNNCC 6 cut(s) 305, 1063, 1855, 2465, 2515, 2613
BspMI ACCTGC 4 cut(s) 554, 855, 1716, 2571
BspPI GGATC 1 cut(s) 1726
BspT104I TTCGAA 1 cut(s) 1909
BspT107I GGYRCC 1 cut(s) 1853
BspTNI GGTCTC 1 cut(s) 187
BsrDI GCAATG 3 cut(s) 1871, 1957, 2127
BsrFI RCCGGY 1 cut(s) 824
BsrI ACTGG 3 cut(s) 13, 262, 1008
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 7 cut(s) 413, 642, 1670, 1996, 2009, 2317, 2404
BssMI GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
BssNAI GTATAC 1 cut(s) 1750
BssSI CACGAG 2 cut(s) 86, 761
BssT1I CCWWGG 3 cut(s) 642, 1670, 2404
Bst1107I GTATAC 1 cut(s) 1750
Bst2BI CACGAG 2 cut(s) 86, 761
Bst2UI CCWGG 2 cut(s) 2319, 2451
Bst4CI ACNGT 3 cut(s) 537, 1265, 2144
Bst6I CTCTTC 2 cut(s) 87, 1821
BstAPI GCANNNNNTGC 1 cut(s) 222
BstBI TTCGAA 1 cut(s) 1909
BstC8I GCNNGC 5 cut(s) 826, 901, 1598, 1805, 1957
BstDSI CCRYGG 2 cut(s) 642, 1996
BstEII GGTNACC 2 cut(s) 1223, 1703
BstF5I GGATG 9 cut(s) 464, 494, 551, 665, 895, 921, 1587, 1974, 2517
BstKTI GATC 8 cut(s) 280, 1187, 1300, 1721, 1814, 1891, 2151, 2200
BstMAI GTCTC 3 cut(s) 187, 1326, 2208
BstMBI GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
BstMWI GCNNNNNNNGC 7 cut(s) 118, 222, 1004, 1315, 1694, 1956, 2027
BstNI CCWGG 2 cut(s) 2319, 2451
BstNSI RCATGY 2 cut(s) 903, 2570
BstPI GGTNACC 2 cut(s) 1223, 1703
BstSCI CCNGG 3 cut(s) 911, 2317, 2449
BstSLI GKGCMC 1 cut(s) 2326
BstV1I GCAGC 5 cut(s) 96, 209, 560, 1327, 1684
BstV2I GAAGAC 4 cut(s) 2406, 2588, 2612, 2640
BstX2I RGATCY 3 cut(s) 277, 1184, 1811
BstXI CCANNNNNNTGG 2 cut(s) 1397, 2089
BstYI RGATCY 3 cut(s) 277, 1184, 1811
BstZ17I GTATAC 1 cut(s) 1750
BsuI GTATCC 1 cut(s) 2287
BsuRI GGCC 2 cut(s) 456, 1650
BtgI CCRYGG 2 cut(s) 642, 1996
BtgZI GCGATG 1 cut(s) 2045
BtsCI GGATG 9 cut(s) 464, 494, 551, 665, 895, 921, 1587, 1974, 2517
BtsIMutI CAGTG 7 cut(s) 20, 613, 751, 803, 1001, 1419, 2515
BveI ACCTGC 4 cut(s) 554, 855, 1716, 2571
Cac8I GCNNGC 5 cut(s) 826, 901, 1598, 1805, 1957
CaiI CAGNNNCTG 3 cut(s) 149, 352, 535
CciI TCATGA 1 cut(s) 1377
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
Csp6I GTAC 1 cut(s) 461
CspCI CAANNNNNGTGG 4 cut(s) 1543, 1578, 1831, 1866
CviAII CATG 9 cut(s) 189, 228, 458, 643, 900, 1343, 1378, 2257, 2567
CviQI GTAC 1 cut(s) 461
DpnI GATC 8 cut(s) 279, 1186, 1299, 1720, 1813, 1890, 2150, 2199
DpnII GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
DraI TTTAAA 2 cut(s) 735, 1125
DrdI GACNNNNNNGTC 1 cut(s) 2567
DriI GACNNNNNGTC 1 cut(s) 61
DseDI GACNNNNNNGTC 1 cut(s) 2567
EaeI YGGCCR 2 cut(s) 454, 1648
Eam1104I CTCTTC 2 cut(s) 87, 1821
Eam1105I GACNNNNNGTC 1 cut(s) 61
EarI CTCTTC 2 cut(s) 87, 1821
Ecl136II GAGCTC 2 cut(s) 766, 1309
Eco130I CCWWGG 3 cut(s) 642, 1670, 2404
Eco24I GRGCYC 2 cut(s) 768, 1311
Eco31I GGTCTC 1 cut(s) 187
Eco47I GGWCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
Eco53kI GAGCTC 2 cut(s) 766, 1309
Eco57I CTGAAG 1 cut(s) 222
Eco88I CYCGRG 3 cut(s) 1310, 2180, 2549
Eco91I GGTNACC 2 cut(s) 1223, 1703
EcoICRI GAGCTC 2 cut(s) 766, 1309
EcoO109I RGGNCCY 1 cut(s) 1061
EcoO65I GGTNACC 2 cut(s) 1223, 1703
EcoRI GAATTC 2 cut(s) 630, 785
EcoRII CCWGG 2 cut(s) 2317, 2449
EcoT14I CCWWGG 3 cut(s) 642, 1670, 2404
EcoT22I ATGCAT 1 cut(s) 1518
EcoT38I GRGCYC 2 cut(s) 768, 1311
ErhI CCWWGG 3 cut(s) 642, 1670, 2404
FaeI CATG 9 cut(s) 192, 231, 461, 646, 903, 1346, 1381, 2260, 2570
FaqI GGGAC 3 cut(s) 245, 546, 1047
FatI CATG 9 cut(s) 188, 227, 457, 642, 899, 1342, 1377, 2256, 2566
FauI CCCGC 1 cut(s) 1693
FbaI TGATCA 1 cut(s) 2148
FblI GTMKAC 1 cut(s) 1749
Fnu4HI GCNGC 5 cut(s) 110, 223, 549, 1316, 1698
FokI GGATG 9 cut(s) 451, 481, 538, 652, 902, 928, 1594, 1981, 2504
FriOI GRGCYC 2 cut(s) 768, 1311
Fsp4HI GCNGC 5 cut(s) 110, 223, 549, 1316, 1698
FspBI CTAG 8 cut(s) 213, 545, 569, 585, 711, 1220, 1238, 1469
GluI GCNGC 5 cut(s) 110, 223, 549, 1316, 1698
GsuI CTGGAG 2 cut(s) 329, 1719
HaeIII GGCC 2 cut(s) 456, 1650
HapII CCGG 2 cut(s) 825, 912
Hin1II CATG 9 cut(s) 192, 231, 461, 646, 903, 1346, 1381, 2260, 2570
HincII GTYRAC 1 cut(s) 1678
HindII GTYRAC 1 cut(s) 1678
HindIII AAGCTT 4 cut(s) 124, 866, 1525, 1686
HpaI GTTAAC 1 cut(s) 1678
HpaII CCGG 2 cut(s) 825, 912
HphI GGTGA 3 cut(s) 65, 1234, 2234
Hpy166II GTNNAC 6 cut(s) 803, 1261, 1354, 1678, 1750, 2324
Hpy188I TCNGA 6 cut(s) 405, 414, 469, 678, 2219, 2274
Hpy8I GTNNAC 6 cut(s) 803, 1261, 1354, 1678, 1750, 2324
HpyAV CCTTC 5 cut(s) 197, 861, 1264, 1676, 2432
HpyCH4III ACNGT 3 cut(s) 537, 1265, 2144
HpyCH4IV ACGT 2 cut(s) 1350, 1977
HpyF10VI GCNNNNNNNGC 7 cut(s) 118, 222, 1004, 1315, 1694, 1956, 2027
HpySE526I ACGT 2 cut(s) 1350, 1977
Hsp92II CATG 9 cut(s) 192, 231, 461, 646, 903, 1346, 1381, 2260, 2570
KroI GCCGGC 1 cut(s) 824
KroNI GCCGGC 1 cut(s) 826
Ksp22I TGATCA 1 cut(s) 2148
KspAI GTTAAC 1 cut(s) 1678
Kzo9I GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
LmnI GCTCC 3 cut(s) 1306, 2103, 2617
Lsp1109I GCAGC 5 cut(s) 96, 209, 560, 1327, 1684
LweI GCATC 4 cut(s) 560, 906, 1525, 2022
MaeI CTAG 8 cut(s) 213, 545, 569, 585, 711, 1220, 1238, 1469
MaeII ACGT 2 cut(s) 1350, 1977
MalI GATC 8 cut(s) 279, 1186, 1299, 1720, 1813, 1890, 2150, 2199
MboI GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
MfeI CAATTG 2 cut(s) 479, 858
MflI RGATCY 3 cut(s) 277, 1184, 1811
MhlI GDGCHC 5 cut(s) 101, 768, 1311, 1419, 2326
MlsI TGGCCA 2 cut(s) 456, 1650
MluNI TGGCCA 2 cut(s) 456, 1650
MlyI GAGTC 3 cut(s) 535, 2033, 2561
MmeI TCCRAC 3 cut(s) 339, 1414, 1518
Mox20I TGGCCA 2 cut(s) 456, 1650
Mph1103I ATGCAT 1 cut(s) 1518
MroNI GCCGGC 1 cut(s) 824
MroXI GAANNNNTTC 1 cut(s) 65
MscI TGGCCA 2 cut(s) 456, 1650
Msp20I TGGCCA 2 cut(s) 456, 1650
MspA1I CMGCKG 1 cut(s) 1318
MspI CCGG 2 cut(s) 825, 912
MspR9I CCNGG 3 cut(s) 913, 2319, 2451
MunI CAATTG 2 cut(s) 479, 858
Mva1269I GAATGC 2 cut(s) 1929, 2100
MvaI CCWGG 2 cut(s) 2319, 2451
MwoI GCNNNNNNNGC 7 cut(s) 118, 222, 1004, 1315, 1694, 1956, 2027
NaeI GCCGGC 1 cut(s) 826
NciI CCSGG 1 cut(s) 913
NcoI CCATGG 1 cut(s) 642
NdeII GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
NgoMIV GCCGGC 1 cut(s) 824
NlaIII CATG 9 cut(s) 192, 231, 461, 646, 903, 1346, 1381, 2260, 2570
NlaIV GGNNCC 6 cut(s) 305, 1063, 1855, 2465, 2515, 2613
NmuCI GTSAC 5 cut(s) 53, 1032, 1240, 1763, 2569
NsiI ATGCAT 1 cut(s) 1518
NspI RCATGY 2 cut(s) 903, 2570
NspV TTCGAA 1 cut(s) 1909
PaeI GCATGC 1 cut(s) 903
PaeR7I CTCGAG 2 cut(s) 1310, 2549
PagI TCATGA 1 cut(s) 1377
PctI GAATGC 2 cut(s) 1929, 2100
PdiI GCCGGC 1 cut(s) 826
PdmI GAANNNNTTC 1 cut(s) 65
PfeI GAWTC 7 cut(s) 638, 753, 872, 906, 1903, 2392, 2446
PfoI TCCNGGA 2 cut(s) 911, 2449
PkrI GCNGC 5 cut(s) 111, 224, 550, 1317, 1699
PleI GAGTC 3 cut(s) 534, 2033, 2560
PpsI GAGTC 3 cut(s) 534, 2033, 2560
PpuMI RGGWCCY 1 cut(s) 1061
PshBI ATTAAT 1 cut(s) 1119
Psp124BI GAGCTC 2 cut(s) 768, 1311
Psp5II RGGWCCY 1 cut(s) 1061
Psp6I CCWGG 2 cut(s) 2317, 2449
PspEI GGTNACC 2 cut(s) 1223, 1703
PspGI CCWGG 2 cut(s) 2317, 2449
PspN4I GGNNCC 6 cut(s) 305, 1063, 1855, 2465, 2515, 2613
PspPI GGNCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
PspPPI RGGWCCY 1 cut(s) 1061
PspXI VCTCGAGB 2 cut(s) 1310, 2549
PstNI CAGNNNCTG 3 cut(s) 149, 352, 535
PsuI RGATCY 3 cut(s) 277, 1184, 1811
PvuII CAGCTG 1 cut(s) 1318
RsaI GTAC 1 cut(s) 462
RsaNI GTAC 1 cut(s) 461
SacI GAGCTC 2 cut(s) 768, 1311
SatI GCNGC 5 cut(s) 110, 223, 549, 1316, 1698
Sau3AI GATC 8 cut(s) 277, 1184, 1297, 1718, 1811, 1888, 2148, 2197
Sau96I GGNCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
SchI GAGTC 3 cut(s) 535, 2033, 2561
ScrFI CCNGG 3 cut(s) 913, 2319, 2451
SduI GDGCHC 5 cut(s) 101, 768, 1311, 1419, 2326
SfaNI GCATC 4 cut(s) 560, 906, 1525, 2022
Sfr274I CTCGAG 2 cut(s) 1310, 2549
SfuI TTCGAA 1 cut(s) 1909
SinI GGWCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
SlaI CTCGAG 2 cut(s) 1310, 2549
SmiI ATTTAAAT 1 cut(s) 1125
SmlI CTYRAG 4 cut(s) 1310, 1528, 1963, 2549
SmoI CTYRAG 4 cut(s) 1310, 1528, 1963, 2549
SpeI ACTAGT 2 cut(s) 584, 1237
SphI GCATGC 1 cut(s) 903
SsiI CCGC 4 cut(s) 102, 1700, 1862, 1937
SspI AATATT 1 cut(s) 2491
SspMI CTAG 8 cut(s) 213, 545, 569, 585, 711, 1220, 1238, 1469
SstI GAGCTC 2 cut(s) 768, 1311
StyD4I CCNGG 3 cut(s) 911, 2317, 2449
StyI CCWWGG 3 cut(s) 642, 1670, 2404
SwaI ATTTAAAT 1 cut(s) 1125
TaaI ACNGT 3 cut(s) 537, 1265, 2144
TaiI ACGT 2 cut(s) 1353, 1980
TfiI GAWTC 7 cut(s) 638, 753, 872, 906, 1903, 2392, 2446
TscAI CASTG 7 cut(s) 20, 613, 751, 810, 1008, 1426, 2515
TseFI GTSAC 5 cut(s) 53, 1032, 1240, 1763, 2569
TseI GCWGC 5 cut(s) 109, 222, 548, 1315, 1697
Tsp45I GTSAC 5 cut(s) 53, 1032, 1240, 1763, 2569
TspDTI ATGAA 7 cut(s) 31, 329, 843, 864, 1394, 1448, 2138
TspRI CASTG 7 cut(s) 20, 613, 751, 810, 1008, 1426, 2515
VneI GTGCAC 1 cut(s) 2322
VpaK11BI GGWCC 6 cut(s) 986, 1061, 1202, 1540, 2514, 2560
VspI ATTAAT 1 cut(s) 1119
XceI RCATGY 2 cut(s) 903, 2570
XcmI CCANNNNNNNNNTGG 4 cut(s) 767, 1212, 1581, 2368
XhoI CTCGAG 2 cut(s) 1310, 2549
XmiI GTMKAC 1 cut(s) 1749
XmnI GAANNNNTTC 1 cut(s) 65
XspI CTAG 8 cut(s) 213, 545, 569, 585, 711, 1220, 1238, 1469
Zsp2I ATGCAT 1 cut(s) 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.