Rw0G002430

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00073
OG0000024
Physical Location & Seq
Reverse (-)
19485 .. 22298
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002430.1

Sequence Viewer

Length: 2784 bp
ATGTTTCGGTTGCTAATTGATCTTGATACTATGTACACTTTGTGGCAGCTATCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGCAAAGCTTTACTATCGATGCATCTGCTTCGGGTTTAGAGGGTGCTTATCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACAACACCAGCTGCTGCACATGGGATGGGGTCGAGTGTGACGAACACACGGGTCATGTGATCGGGCTTGATCTCAGAAGCAGTTGTCTCTACGGCTCTATTCACTCCAACAGCTCCCTCTTCCGTCTTGTTCACCTTCAGAGGCTGAACCTTGCCGATAATCACTTCAATTACTCCCAAATTCCTACTAGCATTAGGAATTTTCCAAGGCTCACCCATCTCGACCTCTCTTTCTCTGTATTTTCTGGTCGATTGTCACTTCTTAATCTTTCTCACAATACCGATTCTTCGGGTGTAGGATTGTTGACACTTGATGGATCCGATTTCAGAAGTCTAGTTCAAAACTTAACTAATCTTCAACGTCTTCGTCTCCGTTTCATCAACATATCTTCGCCAATACCTGATTCCATGGCCAATTTATCATTTTTGACAACCCTTGACTTACATCAGTGTCAGTTGTTTGGAGACTTCCCAGTTAGAATTTTCCAGTTACAAAACTTGCAAAATCTCTATCTCAGAGACAACCAAGATCTCATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCCCCTCATGACTCTCGATGTTCATGGAACTAGATTTTCAGGGAACTTAGCATTTTCTATCGGAAATCTTGGTTCTTTGAAACAGTTGGATGTGGCTGCGTGCAATTTTTCAGCAGGGTTGGTTCCATCTTCGCTGGGTAATCTCAGAGAACTGACTTATCTAGACATTTCAGCTAACTCATTTGGAGGTCCTGTTCCAGATTCTTTTGCAAACCTTACAAAATTGTTTGTTTTTAGGATCAGTACGAGTCTACTAACTGGTCCAATCCCATCCTGGCTGGGTAATTTTAGCGAACTAAGGTACCTAGACTTCAATTATAACAGCTTGTGTGGTTCAATTCCTACAACATTTTCCAATCTCACGAATCTCCAGATTCTTTATCTTCAGTTCAATAACCTGAGCGGTATAGTGGAGTTTCAAACATTTCAAAACCTACAAAATCTCAAGCAACTCGATCTAAGATTCAATTCTCTGGAATTTGTCTCTGAATCCACAGCTGTGAATGCAAGTACTATTCCACAATTCACCCATCTAATGTTGACTTCATGCAACGTAAGAGAGTTCCCATATTTCCTGAGATATCAAAAACATTTGCAGCATTTGGTGCTTGCTAGAAACAAAATCCGTGGGCAAGTACCAAAATGGATGTGGAACATGAGCACAGAATCCTTGGTTCTGCTAGACATTTCTGAAAATTTCCTTTCCGGCCAACTTCCTGTTTTCATTCCTTGGGTCAAACAACTATACTTGATTCTTGATTTCAACATGTTCCATGGGCCACTGCCGATACCTCCATCATCCACTGTAGTCTATCAAGCTAATGACAACAAATTCACTGGAAAAGTTTCACCAGTGATCTGCAATATGAGTTCTCTTCTGGCGCTTGATTTGTCCAATAACAACTTGAGTGGCATGATTCCGCAGTGTTTCGGAAACTTTAGTGATCCATTGATAGTTTTAATTCTTGGAAATAACTCGTTTCACGGCACTCTACCGCAAACATACACCAACAAAAGCAGCTTGAGGATACTTGATGTGAGTCAAAATCAATTGCAAGGGCGACTACCAAGGTCATTGGCGAATTGTCTGATGCTTGAGACTTTGGTCCTGTCAAACAATTACTTCAATGATGTCTTTCCCTTTTGGATGGTTACTCTACCTGAGTTGAAACTCTTGGCAATGCGGCATAATGCGTTCCAAGGATTGATAGGAAAGCCTGAAAACAATCAGCAGTTCCCAAAGTTGCGTATTTTAGATATTTCTCACAATAACTTCACAGGCAAGTTTGTAGCTGAATACATCTTCTCCAAGTATGCCATGAGATCAGTCAACCAGTCGACCTCTATGAAGGTTGGCATAAATTACATCTCTAGTATTTTTGATTGGATCACTTATCCTTCCACGATGACAATAACCATTAAAGGTGTGGATAGATACTATCCAAGGATTCAAGAAGCTTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGGAAGATTGATGAATCCATTGGGAGTCTAAAAGGGCTTTGGTCCCTTAATTTTTCCAATAATCTTCTCAGTGGTCGTATCCCGTCATCGTTTGGGAACTTGACGAATCTTGAAGTACTAGACCTTTCCAATAACAAGCTCTGGGGAAAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGCAGAATTCAATGTCTCTCACAACAATCTCACAGGTCCAATACCGCGTGGACCGCAACTCAATACCTTCTCTATCAATTCATATGAGGGAAATCCTGGATTGTGCGGAGATCCTTTGCCAAAGAGATGTCAGAGCTCTAATGCCCCACCGGAACTGCCACCTTCAAACACAGAAGAAAATGATTCTGGAATTGAATTTGAATGGACTTTTGTGCTCGCTGGATGCGGAAGTGGGTTCGTGGTGGGAGTTGTACTTGCGGACCTGGCCATCACACGGAGGCGTGAGTTGTTTCTTGAGATAGTTGGAATGTTGATCAGACTAATGGAAAGGATCACAAGCTTGAAGAGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

927

Amino Acids

104.11

Weight (kDa)

6.81

Isoelectric Point (pI)

40.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 21 - 74 1.2e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 173 - 281 4.8e-08 Leucine-rich repeat region
LRR_14 PF23598 253 - 479 1.5e-14 Leucine-rich repeat region
LRR_8 PF13855 334 - 382 5.3e-06 Leucine rich repeat
LRR_8 PF13855 614 - 674 1.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1065
Acc65I GGTACC 1 cut(s) 1047
AccB1I GGYRCC 1 cut(s) 1047
AccBSI CCGCTC 1 cut(s) 1149
AccI GTMKAC 2 cut(s) 997, 2084
AccII CGCG 1 cut(s) 2470
AciI CCGC 9 cut(s) 1149, 1667, 1742, 1930, 2468, 2477, 2529, 2649, 2681
AclWI GGATC 7 cut(s) 492, 505, 992, 1685, 2141, 2528, 2762
AcoI YGGCCR 3 cut(s) 591, 1453, 2688
AcuI CTGAAG 2 cut(s) 302, 1115
AdeI CACNNNGTG 1 cut(s) 42
AfaI GTAC 7 cut(s) 35, 991, 1049, 1258, 1383, 2358, 2676
AfiI CCNNNNNNNGG 1 cut(s) 2697
AflIII ACRYGT 1 cut(s) 1512
AjnI CCWGG 4 cut(s) 158, 1019, 2518, 2685
AjuI GAANNNNNNNTTGG 2 cut(s) 568, 600
AleI CACNNNNGTG 1 cut(s) 1244
AloI GAACNNNNNNTCC 2 cut(s) 924, 956
Alw21I GWGCWC 4 cut(s) 77, 1409, 2561, 2640
Alw26I GTCTC 7 cut(s) 272, 554, 639, 693, 1234, 1838, 2443
AlwI GGATC 7 cut(s) 492, 505, 992, 1685, 2141, 2528, 2762
AlwNI CAGNNNCTG 2 cut(s) 195, 325
AoxI GGCC 4 cut(s) 591, 1453, 1523, 2688
ApeKI GCWGC 6 cut(s) 46, 192, 195, 842, 1342, 1764
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
Asp700I GAANNNNTTC 1 cut(s) 1591
Asp718I GGTACC 1 cut(s) 1047
AspLEI GCGC 1 cut(s) 1630
AspS9I GGNCC 8 cut(s) 935, 1007, 1523, 1852, 2283, 2459, 2474, 2683
AsuHPI GGTGA 4 cut(s) 305, 385, 1264, 1587
AvaII GGWCC 7 cut(s) 935, 1007, 1852, 2283, 2459, 2474, 2683
BaeI ACNNNNGTAYC 2 cut(s) 1031, 1064
BalI TGGCCA 2 cut(s) 593, 2690
BamHI GGATCC 1 cut(s) 497
BanI GGYRCC 1 cut(s) 1047
BanII GRGCYC 2 cut(s) 77, 2561
BarI GAAGNNNNNNTAC 2 cut(s) 1040, 1072
BbsI GAAGAC 1 cut(s) 536
Bbv12I GWGCWC 4 cut(s) 77, 1409, 2561, 2640
BbvI GCAGC 6 cut(s) 58, 179, 182, 829, 1354, 1776
BccI CCATC 9 cut(s) 200, 405, 488, 880, 1024, 1284, 1549, 1888, 2699
BceAI ACGGC 2 cut(s) 289, 1747
BcgI CGANNNNNNTGC 4 cut(s) 101, 105, 135, 139
BciT130I CCWGG 4 cut(s) 160, 1021, 2520, 2687
BciVI GTATCC 2 cut(s) 1767, 2330
BclI TGATCA 1 cut(s) 2736
BcoDI GTCTC 7 cut(s) 272, 554, 639, 693, 1234, 1838, 2443
BfaI CTAG 9 cut(s) 369, 515, 777, 908, 1052, 1359, 1427, 2118, 2360
BfmI CTRYAG 1 cut(s) 1551
BfoI RGCGCY 1 cut(s) 1631
BfuI GTATCC 2 cut(s) 1767, 2330
BglII AGATCT 1 cut(s) 709
BisI GCNGC 7 cut(s) 47, 193, 196, 843, 1343, 1765, 1931
BlsI GCNGC 7 cut(s) 48, 194, 197, 844, 1344, 1766, 1932
BmcAI AGTACT 2 cut(s) 1258, 2358
Bme1390I CCNGG 4 cut(s) 160, 1021, 2520, 2687
Bme18I GGWCC 7 cut(s) 935, 1007, 1852, 2283, 2459, 2474, 2683
BmgT120I GGNCC 8 cut(s) 935, 1007, 1523, 1852, 2283, 2459, 2474, 2683
BmiI GGNNCC 4 cut(s) 499, 870, 1049, 2285
BmrFI CCNGG 4 cut(s) 160, 1021, 2520, 2687
BmrI ACTGGG 1 cut(s) 647
BmsI GCATC 4 cut(s) 103, 125, 1827, 2636
BmuI ACTGGG 1 cut(s) 647
BoxI GACNNNNGTC 1 cut(s) 1850
BpiI GAAGAC 1 cut(s) 536
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BpmI CTGGAG 1 cut(s) 1100
Bpu10I CCTNAGC 1 cut(s) 1145
BpuEI CTTGAG 7 cut(s) 156, 1175, 1672, 1789, 1862, 2209, 2738
Bsa29I ATCGAT 1 cut(s) 111
BsaJI CCNNGG 9 cut(s) 386, 588, 1372, 1416, 1475, 1519, 1814, 1945, 2189
BsaWI WCCGGW 1 cut(s) 2572
BsaXI ACNNNNNCTCC 4 cut(s) 924, 954, 2036, 2066
Bsc4I CCNNNNNNNGG 1 cut(s) 2697
Bse1I ACTGG 6 cut(s) 653, 667, 1009, 1588, 1598, 2080
Bse3DI GCAATG 1 cut(s) 1932
BseBI CCWGG 4 cut(s) 160, 1021, 2520, 2687
BseCI ATCGAT 1 cut(s) 111
BseDI CCNNGG 9 cut(s) 386, 588, 1372, 1416, 1475, 1519, 1814, 1945, 2189
BseGI GGATG 7 cut(s) 211, 841, 1016, 1398, 1544, 1899, 2651
BseLI CCNNNNNNNGG 1 cut(s) 2697
BseMI GCAATG 1 cut(s) 1932
BseMII CTCAG 7 cut(s) 268, 709, 904, 1136, 1313, 1899, 2323
BseNI ACTGG 6 cut(s) 653, 667, 1009, 1588, 1598, 2080
BseRI GAGGAG 1 cut(s) 83
BseXI GCAGC 6 cut(s) 58, 179, 182, 829, 1354, 1776
BseYI CCCAGC 2 cut(s) 880, 1024
BsgI GTGCAG 1 cut(s) 181
Bsh1236I CGCG 1 cut(s) 2470
BshFI GGCC 4 cut(s) 593, 1455, 1525, 2690
BshNI GGYRCC 1 cut(s) 1047
BshVI ATCGAT 1 cut(s) 111
BsiHKAI GWGCWC 4 cut(s) 77, 1409, 2561, 2640
BsiSI CCGG 2 cut(s) 1452, 2573
BslFI GGGAC 2 cut(s) 732, 2269
BslI CCNNNNNNNGG 1 cut(s) 2697
BsmAI GTCTC 7 cut(s) 272, 554, 639, 693, 1234, 1838, 2443
BsmBI CGTCTC 1 cut(s) 554
BsmFI GGGAC 2 cut(s) 732, 2269
BsmI GAATGC 1 cut(s) 1255
BsnI GGCC 4 cut(s) 593, 1455, 1525, 2690
Bsp1286I GDGCHC 4 cut(s) 77, 1409, 2561, 2640
Bsp1407I TGTACA 1 cut(s) 33
Bsp19I CCATGG 2 cut(s) 588, 1519
BspACI CCGC 9 cut(s) 1149, 1667, 1742, 1930, 2468, 2477, 2529, 2649, 2681
BspANI GGCC 4 cut(s) 593, 1455, 1525, 2690
BspCNI CTCAG 7 cut(s) 267, 708, 903, 1137, 1314, 1900, 2322
BspDI ATCGAT 1 cut(s) 111
BspFNI CGCG 1 cut(s) 2470
BspHI TCATGA 2 cut(s) 61, 753
BspLI GGNNCC 4 cut(s) 499, 870, 1049, 2285
BspPI GGATC 7 cut(s) 492, 505, 992, 1685, 2141, 2528, 2762
BspT107I GGYRCC 1 cut(s) 1047
BsrBI CCGCTC 1 cut(s) 1149
BsrDI GCAATG 1 cut(s) 1932
BsrGI TGTACA 1 cut(s) 33
BsrI ACTGG 6 cut(s) 653, 667, 1009, 1588, 1598, 2080
BssECI CCNNGG 9 cut(s) 386, 588, 1372, 1416, 1475, 1519, 1814, 1945, 2189
BssT1I CCWWGG 8 cut(s) 386, 588, 1416, 1475, 1519, 1814, 1945, 2189
Bst2UI CCWGG 4 cut(s) 160, 1021, 2520, 2687
Bst4CI ACNGT 2 cut(s) 831, 1552
Bst6I CTCTTC 3 cut(s) 305, 1626, 2762
BstAPI GCANNNNNTGC 1 cut(s) 1351
BstAUI TGTACA 1 cut(s) 33
BstC8I GCNNGC 3 cut(s) 847, 1356, 2640
BstDSI CCRYGG 3 cut(s) 588, 1372, 1519
BstF5I GGATG 7 cut(s) 211, 841, 1016, 1398, 1544, 1899, 2651
BstFNI CGCG 1 cut(s) 2470
BstH2I RGCGCY 1 cut(s) 1631
BstHHI GCGC 1 cut(s) 1630
BstMAI GTCTC 7 cut(s) 272, 554, 639, 693, 1234, 1838, 2443
BstMWI GCNNNNNNNGC 4 cut(s) 1250, 1351, 2476, 2687
BstNI CCWGG 4 cut(s) 160, 1021, 2520, 2687
BstNSI RCATGY 1 cut(s) 1516
BstPAI GACNNNNGTC 1 cut(s) 1850
BstSCI CCNGG 4 cut(s) 158, 1019, 2518, 2685
BstSFI CTRYAG 1 cut(s) 1551
BstUI CGCG 1 cut(s) 2470
BstV1I GCAGC 6 cut(s) 58, 179, 182, 829, 1354, 1776
BstV2I GAAGAC 1 cut(s) 536
BstX2I RGATCY 3 cut(s) 497, 709, 2533
BstXI CCANNNNNNTGG 1 cut(s) 2404
BstYI RGATCY 3 cut(s) 497, 709, 2533
Bsu15I ATCGAT 1 cut(s) 111
BsuI GTATCC 2 cut(s) 1767, 2330
BsuRI GGCC 4 cut(s) 593, 1455, 1525, 2690
BsuTUI ATCGAT 1 cut(s) 111
BtgI CCRYGG 3 cut(s) 588, 1372, 1519
BtsCI GGATG 7 cut(s) 211, 841, 1016, 1398, 1544, 1899, 2651
BtsI GCAGTG 2 cut(s) 1526, 1676
BtsIMutI CAGTG 7 cut(s) 635, 1526, 1548, 1581, 1605, 1676, 2317
Cac8I GCNNGC 3 cut(s) 847, 1356, 2640
CaiI CAGNNNCTG 2 cut(s) 195, 325
CciI TCATGA 2 cut(s) 61, 753
CfoI GCGC 1 cut(s) 1630
Cfr13I GGNCC 8 cut(s) 935, 1007, 1523, 1852, 2283, 2459, 2474, 2683
ClaI ATCGAT 1 cut(s) 111
Csp6I GTAC 7 cut(s) 34, 990, 1048, 1257, 1382, 2357, 2675
CspCI CAANNNNNGTGG 4 cut(s) 1354, 1389, 1636, 1671
CviQI GTAC 7 cut(s) 34, 990, 1048, 1257, 1382, 2357, 2675
DraIII CACNNNGTG 1 cut(s) 42
EaeI YGGCCR 3 cut(s) 591, 1453, 2688
Eam1104I CTCTTC 3 cut(s) 305, 1626, 2762
EarI CTCTTC 3 cut(s) 305, 1626, 2762
Ecl136II GAGCTC 2 cut(s) 75, 2559
Eco130I CCWWGG 8 cut(s) 386, 588, 1416, 1475, 1519, 1814, 1945, 2189
Eco24I GRGCYC 2 cut(s) 77, 2561
Eco32I GATATC 2 cut(s) 1328, 2221
Eco47I GGWCC 7 cut(s) 935, 1007, 1852, 2283, 2459, 2474, 2683
Eco53kI GAGCTC 2 cut(s) 75, 2559
Eco57I CTGAAG 2 cut(s) 302, 1115
EcoICRI GAGCTC 2 cut(s) 75, 2559
EcoO109I RGGNCCY 1 cut(s) 935
EcoRI GAATTC 1 cut(s) 2429
EcoRII CCWGG 4 cut(s) 158, 1019, 2518, 2685
EcoRV GATATC 2 cut(s) 1328, 2221
EcoT14I CCWWGG 8 cut(s) 386, 588, 1416, 1475, 1519, 1814, 1945, 2189
EcoT22I ATGCAT 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 77, 2561
ErhI CCWWGG 8 cut(s) 386, 588, 1416, 1475, 1519, 1814, 1945, 2189
Esp3I CGTCTC 1 cut(s) 554
FalI AAGNNNNNCTT 2 cut(s) 86, 118
FaqI GGGAC 2 cut(s) 732, 2269
FauNDI CATATG 1 cut(s) 2506
FbaI TGATCA 1 cut(s) 2736
FblI GTMKAC 2 cut(s) 997, 2084
Fnu4HI GCNGC 7 cut(s) 47, 193, 196, 843, 1343, 1765, 1931
FokI GGATG 7 cut(s) 218, 848, 1003, 1405, 1531, 1906, 2658
FriOI GRGCYC 2 cut(s) 77, 2561
Fsp4HI GCNGC 7 cut(s) 47, 193, 196, 843, 1343, 1765, 1931
FspBI CTAG 9 cut(s) 369, 515, 777, 908, 1052, 1359, 1427, 2118, 2360
GlaI GCGC 1 cut(s) 1629
GluI GCNGC 7 cut(s) 47, 193, 196, 843, 1343, 1765, 1931
GsaI CCCAGC 2 cut(s) 884, 1028
GsuI CTGGAG 1 cut(s) 1100
HaeII RGCGCY 1 cut(s) 1631
HaeIII GGCC 4 cut(s) 593, 1455, 1525, 2690
HapII CCGG 2 cut(s) 1452, 2573
HhaI GCGC 1 cut(s) 1630
Hin6I GCGC 1 cut(s) 1628
HinP1I GCGC 1 cut(s) 1628
HincII GTYRAC 4 cut(s) 486, 1287, 2077, 2085
HindII GTYRAC 4 cut(s) 486, 1287, 2077, 2085
HindIII AAGCTT 3 cut(s) 100, 2202, 2761
HpaII CCGG 2 cut(s) 1452, 2573
HphI GGTGA 4 cut(s) 305, 385, 1264, 1587
Hpy166II GTNNAC 8 cut(s) 36, 313, 486, 998, 1287, 2077, 2085, 2474
Hpy8I GTNNAC 8 cut(s) 36, 313, 486, 998, 1287, 2077, 2085, 2474
HpyAV CCTTC 6 cut(s) 326, 2089, 2154, 2234, 2500, 2595
HpyCH4III ACNGT 2 cut(s) 831, 1552
HpyCH4IV ACGT 2 cut(s) 541, 1299
HpyF10VI GCNNNNNNNGC 4 cut(s) 1250, 1351, 2476, 2687
HpySE526I ACGT 2 cut(s) 541, 1299
HspAI GCGC 1 cut(s) 1628
KpnI GGTACC 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 2736
LmnI GCTCC 1 cut(s) 299
Lsp1109I GCAGC 6 cut(s) 58, 179, 182, 829, 1354, 1776
LweI GCATC 4 cut(s) 103, 125, 1827, 2636
MaeI CTAG 9 cut(s) 369, 515, 777, 908, 1052, 1359, 1427, 2118, 2360
MaeII ACGT 2 cut(s) 541, 1299
MaeIII GTNAC 4 cut(s) 218, 435, 669, 1897
MbiI CCGCTC 1 cut(s) 1149
MfeI CAATTG 2 cut(s) 1796, 2402
MflI RGATCY 3 cut(s) 497, 709, 2533
MhlI GDGCHC 4 cut(s) 77, 1409, 2561, 2640
MlsI TGGCCA 2 cut(s) 593, 2690
MluNI TGGCCA 2 cut(s) 593, 2690
MlyI GAGTC 4 cut(s) 751, 1003, 1795, 2275
MmeI TCCRAC 3 cut(s) 312, 813, 2707
Mox20I TGGCCA 2 cut(s) 593, 2690
Mph1103I ATGCAT 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 1591
MscI TGGCCA 2 cut(s) 593, 2690
MseI TTAA 6 cut(s) 444, 527, 735, 1706, 2166, 2289
MslI CAYNNNNRTG 1 cut(s) 1244
Msp20I TGGCCA 2 cut(s) 593, 2690
MspA1I CMGCKG 3 cut(s) 192, 1244, 2413
MspI CCGG 2 cut(s) 1452, 2573
MspR9I CCNGG 4 cut(s) 160, 1021, 2520, 2687
MunI CAATTG 2 cut(s) 1796, 2402
Mva1269I GAATGC 1 cut(s) 1255
MvaI CCWGG 4 cut(s) 160, 1021, 2520, 2687
MvnI CGCG 1 cut(s) 2470
MwoI GCNNNNNNNGC 4 cut(s) 1250, 1351, 2476, 2687
NcoI CCATGG 2 cut(s) 588, 1519
NdeI CATATG 1 cut(s) 2506
NlaIV GGNNCC 4 cut(s) 499, 870, 1049, 2285
NmuCI GTSAC 2 cut(s) 218, 435
NsiI ATGCAT 1 cut(s) 118
NspI RCATGY 1 cut(s) 1516
OliI CACNNNNGTG 1 cut(s) 1244
PagI TCATGA 2 cut(s) 61, 753
PciI ACATGT 1 cut(s) 1512
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 1255
PdmI GAANNNNTTC 1 cut(s) 1591
PfoI TCCNGGA 2 cut(s) 158, 2518
PkrI GCNGC 7 cut(s) 48, 194, 197, 844, 1344, 1766, 1932
PleI GAGTC 4 cut(s) 751, 1002, 1794, 2274
PpsI GAGTC 4 cut(s) 751, 1002, 1794, 2274
PpuMI RGGWCCY 1 cut(s) 935
PscI ACATGT 1 cut(s) 1512
PshAI GACNNNNGTC 1 cut(s) 1850
PsiI TTATAA 1 cut(s) 1065
Psp124BI GAGCTC 2 cut(s) 77, 2561
Psp5II RGGWCCY 1 cut(s) 935
Psp6I CCWGG 4 cut(s) 158, 1019, 2518, 2685
PspFI CCCAGC 2 cut(s) 880, 1024
PspGI CCWGG 4 cut(s) 158, 1019, 2518, 2685
PspN4I GGNNCC 4 cut(s) 499, 870, 1049, 2285
PspPI GGNCC 8 cut(s) 935, 1007, 1523, 1852, 2283, 2459, 2474, 2683
PspPPI RGGWCCY 1 cut(s) 935
PstNI CAGNNNCTG 2 cut(s) 195, 325
PsuI RGATCY 3 cut(s) 497, 709, 2533
PvuII CAGCTG 3 cut(s) 192, 1244, 2413
RsaI GTAC 7 cut(s) 35, 991, 1049, 1258, 1383, 2358, 2676
RsaNI GTAC 7 cut(s) 34, 990, 1048, 1257, 1382, 2357, 2675
RseI CAYNNNNRTG 1 cut(s) 1244
SacI GAGCTC 2 cut(s) 77, 2561
SalI GTCGAC 1 cut(s) 2083
SaqAI TTAA 6 cut(s) 444, 527, 735, 1706, 2166, 2289
SatI GCNGC 7 cut(s) 47, 193, 196, 843, 1343, 1765, 1931
Sau96I GGNCC 8 cut(s) 935, 1007, 1523, 1852, 2283, 2459, 2474, 2683
ScaI AGTACT 2 cut(s) 1258, 2358
SchI GAGTC 4 cut(s) 751, 1003, 1795, 2275
ScrFI CCNGG 4 cut(s) 160, 1021, 2520, 2687
SduI GDGCHC 4 cut(s) 77, 1409, 2561, 2640
SfaNI GCATC 4 cut(s) 103, 125, 1827, 2636
SfcI CTRYAG 1 cut(s) 1551
SinI GGWCC 7 cut(s) 935, 1007, 1852, 2283, 2459, 2474, 2683
SmiMI CAYNNNNRTG 1 cut(s) 1244
SmlI CTYRAG 7 cut(s) 171, 1190, 1651, 1768, 1841, 2224, 2717
SmoI CTYRAG 7 cut(s) 171, 1190, 1651, 1768, 1841, 2224, 2717
SsiI CCGC 9 cut(s) 1149, 1667, 1742, 1930, 2468, 2477, 2529, 2649, 2681
SspMI CTAG 9 cut(s) 369, 515, 777, 908, 1052, 1359, 1427, 2118, 2360
SstI GAGCTC 2 cut(s) 77, 2561
StyD4I CCNGG 4 cut(s) 158, 1019, 2518, 2685
StyI CCWWGG 8 cut(s) 386, 588, 1416, 1475, 1519, 1814, 1945, 2189
TaaI ACNGT 2 cut(s) 831, 1552
TaiI ACGT 2 cut(s) 544, 1302
TaqI TCGA 7 cut(s) 111, 213, 402, 430, 762, 1200, 2084
TatI WGTACW 4 cut(s) 33, 1256, 2356, 2674
TauI GCSGC 1 cut(s) 1933
Tru1I TTAA 6 cut(s) 444, 527, 735, 1706, 2166, 2289
Tru9I TTAA 6 cut(s) 444, 527, 735, 1706, 2166, 2289
TscAI CASTG 7 cut(s) 635, 1533, 1555, 1588, 1605, 1676, 2317
TseFI GTSAC 2 cut(s) 218, 435
TseI GCWGC 6 cut(s) 46, 192, 195, 842, 1342, 1764
Tsp45I GTSAC 2 cut(s) 218, 435
TspDTI ATGAA 7 cut(s) 547, 758, 1281, 1459, 2108, 2268, 2493
TspGWI ACGGA 4 cut(s) 293, 542, 1361, 2713
TspRI CASTG 7 cut(s) 635, 1533, 1555, 1588, 1605, 1676, 2317
VpaK11BI GGWCC 7 cut(s) 935, 1007, 1852, 2283, 2459, 2474, 2683
XbaI TCTAGA 1 cut(s) 907
XceI RCATGY 1 cut(s) 1516
XcmI CCANNNNNNNNNTGG 4 cut(s) 713, 1017, 1392, 2170
XmiI GTMKAC 2 cut(s) 997, 2084
XmnI GAANNNNTTC 1 cut(s) 1591
XspI CTAG 9 cut(s) 369, 515, 777, 908, 1052, 1359, 1427, 2118, 2360
ZrmI AGTACT 2 cut(s) 1258, 2358
Zsp2I ATGCAT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.