Receptor-like protein 12
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 43 - 96 | 1.2e-07 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 115 - 220 | 1.1e-08 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 127 - 185 | 4.9e-06 | Leucine rich repeat |
| LRR_14 | PF23598 | 287 - 433 | 4.8e-10 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 621 - 678 | 2.2e-07 | Leucine rich repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1956 |
| Acc16I | TGCGCA | 1 cut(s) | 2159 |
| AccB1I | GGYRCC | 1 cut(s) | 1823 |
| AccII | CGCG | 1 cut(s) | 1612 |
| AciI | CCGC | 4 cut(s) | 16, 1032, 1612, 2381 |
| AclWI | GGATC | 2 cut(s) | 1696, 2942 |
| AcoI | YGGCCR | 5 cut(s) | 493, 690, 1534, 1618, 2268 |
| AcuI | CTGAAG | 2 cut(s) | 258, 1834 |
| AfaI | GTAC | 4 cut(s) | 1783, 1793, 2637, 2856 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 133, 441, 483, 1642, 1841 |
| AflIII | ACRYGT | 1 cut(s) | 1812 |
| AhlI | ACTAGT | 1 cut(s) | 629 |
| AjiI | CACGTC | 3 cut(s) | 855, 1503, 2866 |
| AjnI | CCWGG | 1 cut(s) | 2689 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 955, 987, 2403, 2435, 2462, 2494, 2801, 2833 |
| Alw21I | GWGCWC | 2 cut(s) | 143, 2299 |
| Alw26I | GTCTC | 9 cut(s) | 223, 287, 338, 368, 1395, 1672, 2016, 2072, 2614 |
| Alw44I | GTGCAC | 1 cut(s) | 2295 |
| AlwI | GGATC | 2 cut(s) | 1696, 2942 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2633 |
| Ama87I | CYCGRG | 1 cut(s) | 2359 |
| AoxI | GGCC | 8 cut(s) | 37, 493, 690, 1174, 1534, 1618, 2268, 2705 |
| ApaLI | GTGCAC | 1 cut(s) | 2295 |
| ApeKI | GCWGC | 9 cut(s) | 151, 233, 261, 357, 1089, 1135, 1301, 2487, 2763 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2795, 2827 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 642, 2033, 2139, 2892 |
| AspLEI | GCGC | 1 cut(s) | 2160 |
| AspS9I | GGNCC | 7 cut(s) | 959, 1175, 1279, 1510, 2533, 2645, 2705 |
| AsuHPI | GGTGA | 7 cut(s) | 362, 1382, 1683, 1752, 2002, 2204, 2395 |
| AsuII | TTCGAA | 2 cut(s) | 47, 2319 |
| AsuNHI | GCTAGC | 1 cut(s) | 86 |
| AvaI | CYCGRG | 1 cut(s) | 2359 |
| AvaII | GGWCC | 5 cut(s) | 959, 1279, 1510, 2533, 2645 |
| AxyI | CCTNAGG | 1 cut(s) | 1592 |
| BaeGI | GKGCMC | 1 cut(s) | 2299 |
| BalI | TGGCCA | 5 cut(s) | 495, 692, 1536, 1620, 2270 |
| BanI | GGYRCC | 1 cut(s) | 1823 |
| BbsI | GAAGAC | 1 cut(s) | 1107 |
| Bbv12I | GWGCWC | 2 cut(s) | 143, 2299 |
| BbvI | GCAGC | 9 cut(s) | 138, 245, 248, 369, 1101, 1147, 1288, 2499, 2775 |
| BceAI | ACGGC | 1 cut(s) | 2500 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2659, 2693 |
| BciT130I | CCWGG | 1 cut(s) | 2691 |
| BcoDI | GTCTC | 9 cut(s) | 223, 287, 338, 368, 1395, 1672, 2016, 2072, 2614 |
| BcuI | ACTAGT | 1 cut(s) | 629 |
| BisI | GCNGC | 9 cut(s) | 152, 234, 262, 358, 1090, 1136, 1302, 2488, 2764 |
| BlpI | GCTNAGC | 1 cut(s) | 2745 |
| BlsI | GCNGC | 9 cut(s) | 153, 235, 263, 359, 1091, 1137, 1303, 2489, 2765 |
| BmcAI | AGTACT | 2 cut(s) | 1783, 1793 |
| Bme1390I | CCNGG | 1 cut(s) | 2691 |
| Bme18I | GGWCC | 5 cut(s) | 959, 1279, 1510, 2533, 2645 |
| BmeT110I | CYCGRG | 1 cut(s) | 2359 |
| BmgBI | CACGTC | 3 cut(s) | 855, 1503, 2866 |
| BmgT120I | GGNCC | 7 cut(s) | 959, 1175, 1279, 1510, 2533, 2645, 2705 |
| BmiI | GGNNCC | 3 cut(s) | 343, 1825, 2647 |
| BmrFI | CCNGG | 1 cut(s) | 2691 |
| BmrI | ACTGGG | 2 cut(s) | 1758, 2644 |
| BmsI | GCATC | 5 cut(s) | 605, 1929, 1992, 2082, 2499 |
| BmtI | GCTAGC | 1 cut(s) | 90 |
| BmuI | ACTGGG | 2 cut(s) | 1758, 2644 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1221 |
| BpiI | GAAGAC | 1 cut(s) | 1107 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2186, 2218 |
| BpmI | CTGGAG | 2 cut(s) | 337, 2724 |
| Bpu10I | CCTNAGC | 2 cut(s) | 458, 1202 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2745 |
| Bpu14I | TTCGAA | 2 cut(s) | 47, 2319 |
| BpuEI | CTTGAG | 4 cut(s) | 935, 2027, 2380, 2918 |
| BsaAI | YACGTR | 1 cut(s) | 869 |
| BsaBI | GATNNNNATC | 2 cut(s) | 10, 2390 |
| BsaI | GGTCTC | 1 cut(s) | 223 |
| BsaJI | CCNNGG | 4 cut(s) | 452, 1640, 2410, 2689 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 133, 441, 483, 1642, 1841 |
| Bse1I | ACTGG | 4 cut(s) | 19, 1753, 1992, 2650 |
| Bse21I | CCTNAGG | 1 cut(s) | 1592 |
| Bse3DI | GCAATG | 3 cut(s) | 1362, 2516, 2708 |
| Bse8I | GATNNNNATC | 2 cut(s) | 10, 2390 |
| BseBI | CCWGG | 1 cut(s) | 2691 |
| BseDI | CCNNGG | 4 cut(s) | 452, 1640, 2410, 2689 |
| BseGI | GGATG | 9 cut(s) | 277, 533, 710, 1107, 1557, 1621, 1716, 2490, 2916 |
| BseJI | GATNNNNATC | 2 cut(s) | 10, 2390 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 133, 441, 483, 1642, 1841 |
| BseMI | GCAATG | 3 cut(s) | 1362, 2516, 2708 |
| BseNI | ACTGG | 4 cut(s) | 19, 1753, 1992, 2650 |
| BseRI | GAGGAG | 2 cut(s) | 149, 305 |
| BseSI | GKGCMC | 1 cut(s) | 2299 |
| BseXI | GCAGC | 9 cut(s) | 138, 245, 248, 369, 1101, 1147, 1288, 2499, 2775 |
| BseYI | CCCAGC | 1 cut(s) | 2568 |
| Bsh1236I | CGCG | 1 cut(s) | 1612 |
| BshFI | GGCC | 8 cut(s) | 39, 495, 692, 1176, 1536, 1620, 2270, 2707 |
| BshNI | GGYRCC | 1 cut(s) | 1823 |
| BsiHKAI | GWGCWC | 2 cut(s) | 143, 2299 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2359 |
| BslFI | GGGAC | 2 cut(s) | 485, 2631 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 133, 441, 483, 1642, 1841 |
| BsmAI | GTCTC | 9 cut(s) | 223, 287, 338, 368, 1395, 1672, 2016, 2072, 2614 |
| BsmBI | CGTCTC | 1 cut(s) | 287 |
| BsmFI | GGGAC | 2 cut(s) | 485, 2631 |
| BsmI | GAATGC | 3 cut(s) | 950, 1899, 2160 |
| BsnI | GGCC | 8 cut(s) | 39, 495, 692, 1176, 1536, 1620, 2270, 2707 |
| Bso31I | GGTCTC | 1 cut(s) | 223 |
| BsoBI | CYCGRG | 1 cut(s) | 2359 |
| Bsp119I | TTCGAA | 2 cut(s) | 47, 2319 |
| Bsp1286I | GDGCHC | 2 cut(s) | 143, 2299 |
| Bsp143I | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2745 |
| BspACI | CCGC | 4 cut(s) | 16, 1032, 1612, 2381 |
| BspANI | GGCC | 8 cut(s) | 39, 495, 692, 1176, 1536, 1620, 2270, 2707 |
| BspFNI | CGCG | 1 cut(s) | 1612 |
| BspLI | GGNNCC | 3 cut(s) | 343, 1825, 2647 |
| BspOI | GCTAGC | 1 cut(s) | 90 |
| BspPI | GGATC | 2 cut(s) | 1696, 2942 |
| BspT104I | TTCGAA | 2 cut(s) | 47, 2319 |
| BspT107I | GGYRCC | 1 cut(s) | 1823 |
| BspTNI | GGTCTC | 1 cut(s) | 223 |
| BsrDI | GCAATG | 3 cut(s) | 1362, 2516, 2708 |
| BsrI | ACTGG | 4 cut(s) | 19, 1753, 1992, 2650 |
| BssECI | CCNNGG | 4 cut(s) | 452, 1640, 2410, 2689 |
| BssMI | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| BssT1I | CCWWGG | 2 cut(s) | 1640, 2410 |
| Bst2UI | CCWGG | 1 cut(s) | 2691 |
| Bst4CI | ACNGT | 3 cut(s) | 930, 1238, 1319 |
| Bst6I | CTCTTC | 1 cut(s) | 484 |
| BstBAI | YACGTR | 1 cut(s) | 869 |
| BstBI | TTCGAA | 2 cut(s) | 47, 2319 |
| BstC8I | GCNNGC | 3 cut(s) | 41, 88, 2272 |
| BstEII | GGTNACC | 1 cut(s) | 1196 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 481 |
| BstF5I | GGATG | 9 cut(s) | 277, 533, 710, 1107, 1557, 1621, 1716, 2490, 2916 |
| BstFNI | CGCG | 1 cut(s) | 1612 |
| BstHHI | GCGC | 1 cut(s) | 2160 |
| BstKTI | GATC | 5 cut(s) | 247, 1691, 1861, 2377, 2937 |
| BstMAI | GTCTC | 9 cut(s) | 223, 287, 338, 368, 1395, 1672, 2016, 2072, 2614 |
| BstMBI | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 160, 977, 1054, 2867 |
| BstNI | CCWGG | 1 cut(s) | 2691 |
| BstNSI | RCATGY | 1 cut(s) | 1816 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1221 |
| BstPI | GGTNACC | 1 cut(s) | 1196 |
| BstSCI | CCNGG | 1 cut(s) | 2689 |
| BstSLI | GKGCMC | 1 cut(s) | 2299 |
| BstUI | CGCG | 1 cut(s) | 1612 |
| BstV1I | GCAGC | 9 cut(s) | 138, 245, 248, 369, 1101, 1147, 1288, 2499, 2775 |
| BstV2I | GAAGAC | 1 cut(s) | 1107 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1967 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1592 |
| BsuRI | GGCC | 8 cut(s) | 39, 495, 692, 1176, 1536, 1620, 2270, 2707 |
| BtgZI | GCGATG | 1 cut(s) | 2105 |
| BtrI | CACGTC | 3 cut(s) | 855, 1503, 2866 |
| BtsCI | GGATG | 9 cut(s) | 277, 533, 710, 1107, 1557, 1621, 1716, 2490, 2916 |
| BtsI | GCAGTG | 1 cut(s) | 141 |
| BtsIMutI | CAGTG | 7 cut(s) | 26, 141, 857, 1858, 1985, 2031, 2044 |
| Cac8I | GCNNGC | 3 cut(s) | 41, 88, 2272 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2633 |
| CfoI | GCGC | 1 cut(s) | 2160 |
| Cfr13I | GGNCC | 7 cut(s) | 959, 1175, 1279, 1510, 2533, 2645, 2705 |
| Csp6I | GTAC | 4 cut(s) | 1782, 1792, 2636, 2855 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1081, 1116 |
| CviQI | GTAC | 4 cut(s) | 1782, 1792, 2636, 2855 |
| DpnI | GATC | 5 cut(s) | 246, 1690, 1860, 2376, 2936 |
| DpnII | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| DraI | TTTAAA | 2 cut(s) | 1242, 1872 |
| EaeI | YGGCCR | 5 cut(s) | 493, 690, 1534, 1618, 2268 |
| Eam1104I | CTCTTC | 1 cut(s) | 484 |
| EarI | CTCTTC | 1 cut(s) | 484 |
| Eco130I | CCWWGG | 2 cut(s) | 1640, 2410 |
| Eco31I | GGTCTC | 1 cut(s) | 223 |
| Eco32I | GATATC | 1 cut(s) | 2392 |
| Eco47I | GGWCC | 5 cut(s) | 959, 1279, 1510, 2533, 2645 |
| Eco57I | CTGAAG | 2 cut(s) | 258, 1834 |
| Eco81I | CCTNAGG | 1 cut(s) | 1592 |
| Eco88I | CYCGRG | 1 cut(s) | 2359 |
| Eco91I | GGTNACC | 1 cut(s) | 1196 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 481 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2645 |
| EcoO65I | GGTNACC | 1 cut(s) | 1196 |
| EcoRI | GAATTC | 2 cut(s) | 746, 2426 |
| EcoRII | CCWGG | 1 cut(s) | 2689 |
| EcoRV | GATATC | 1 cut(s) | 2392 |
| EcoT14I | CCWWGG | 2 cut(s) | 1640, 2410 |
| ErhI | CCWWGG | 2 cut(s) | 1640, 2410 |
| Esp3I | CGTCTC | 1 cut(s) | 287 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 152, 184, 2124, 2156, 2361, 2393 |
| FaqI | GGGAC | 2 cut(s) | 485, 2631 |
| FauI | CCCGC | 1 cut(s) | 23 |
| Fnu4HI | GCNGC | 9 cut(s) | 152, 234, 262, 358, 1090, 1136, 1302, 2488, 2764 |
| FokI | GGATG | 9 cut(s) | 284, 520, 697, 1094, 1564, 1608, 1703, 2477, 2923 |
| Fsp4HI | GCNGC | 9 cut(s) | 152, 234, 262, 358, 1090, 1136, 1302, 2488, 2764 |
| FspI | TGCGCA | 1 cut(s) | 2159 |
| GlaI | GCGC | 1 cut(s) | 2159 |
| GluI | GCNGC | 9 cut(s) | 152, 234, 262, 358, 1090, 1136, 1302, 2488, 2764 |
| GsaI | CCCAGC | 1 cut(s) | 2572 |
| GsuI | CTGGAG | 2 cut(s) | 337, 2724 |
| HaeIII | GGCC | 8 cut(s) | 39, 495, 692, 1176, 1536, 1620, 2270, 2707 |
| HhaI | GCGC | 1 cut(s) | 2160 |
| Hin6I | GCGC | 1 cut(s) | 2158 |
| HinP1I | GCGC | 1 cut(s) | 2158 |
| HincII | GTYRAC | 1 cut(s) | 1648 |
| HindII | GTYRAC | 1 cut(s) | 1648 |
| HindIII | AAGCTT | 3 cut(s) | 166, 641, 1495 |
| HpaI | GTTAAC | 1 cut(s) | 1648 |
| HphI | GGTGA | 7 cut(s) | 362, 1382, 1683, 1752, 2002, 2204, 2395 |
| Hpy166II | GTNNAC | 2 cut(s) | 1648, 2297 |
| Hpy188I | TCNGA | 9 cut(s) | 187, 387, 453, 508, 908, 1098, 1672, 1880, 2247 |
| Hpy8I | GTNNAC | 2 cut(s) | 1648, 2297 |
| Hpy99I | CGWCG | 1 cut(s) | 1289 |
| HpyAV | CCTTC | 7 cut(s) | 223, 233, 906, 1082, 1322, 1646, 2766 |
| HpyCH4III | ACNGT | 3 cut(s) | 930, 1238, 1319 |
| HpyCH4IV | ACGT | 5 cut(s) | 854, 868, 1502, 2043, 2865 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 160, 977, 1054, 2867 |
| HpySE526I | ACGT | 5 cut(s) | 854, 868, 1502, 2043, 2865 |
| HspAI | GCGC | 1 cut(s) | 2158 |
| KspAI | GTTAAC | 1 cut(s) | 1648 |
| Kzo9I | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| LmnI | GCTCC | 4 cut(s) | 95, 347, 1365, 2743 |
| Lsp1109I | GCAGC | 9 cut(s) | 138, 245, 248, 369, 1101, 1147, 1288, 2499, 2775 |
| LweI | GCATC | 5 cut(s) | 605, 1929, 1992, 2082, 2499 |
| MaeII | ACGT | 5 cut(s) | 854, 868, 1502, 2043, 2865 |
| MaeIII | GTNAC | 7 cut(s) | 768, 855, 1005, 1196, 1844, 2039, 2323 |
| MalI | GATC | 5 cut(s) | 246, 1690, 1860, 2376, 2936 |
| MboI | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| MfeI | CAATTG | 2 cut(s) | 518, 1961 |
| MhlI | GDGCHC | 2 cut(s) | 143, 2299 |
| MlsI | TGGCCA | 5 cut(s) | 495, 692, 1536, 1620, 2270 |
| MluNI | TGGCCA | 5 cut(s) | 495, 692, 1536, 1620, 2270 |
| MlyI | GAGTC | 2 cut(s) | 2018, 2074 |
| MmeI | TCCRAC | 4 cut(s) | 912, 1387, 1488, 2511 |
| Mox20I | TGGCCA | 5 cut(s) | 495, 692, 1536, 1620, 2270 |
| MroXI | GAANNNNTTC | 4 cut(s) | 642, 2033, 2139, 2892 |
| MscI | TGGCCA | 5 cut(s) | 495, 692, 1536, 1620, 2270 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1355, 1626, 1768, 1937, 2100, 2261 |
| Msp20I | TGGCCA | 5 cut(s) | 495, 692, 1536, 1620, 2270 |
| MspA1I | CMGCKG | 1 cut(s) | 236 |
| MspR9I | CCNGG | 1 cut(s) | 2691 |
| MunI | CAATTG | 2 cut(s) | 518, 1961 |
| Mva1269I | GAATGC | 3 cut(s) | 950, 1899, 2160 |
| MvaI | CCWGG | 1 cut(s) | 2691 |
| MvnI | CGCG | 1 cut(s) | 1612 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 160, 977, 1054, 2867 |
| NdeII | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| NheI | GCTAGC | 1 cut(s) | 86 |
| NlaIV | GGNNCC | 3 cut(s) | 343, 1825, 2647 |
| NmuCI | GTSAC | 4 cut(s) | 855, 1005, 2039, 2323 |
| NsbI | TGCGCA | 1 cut(s) | 2159 |
| NspI | RCATGY | 1 cut(s) | 1816 |
| NspV | TTCGAA | 2 cut(s) | 47, 2319 |
| PaeR7I | CTCGAG | 1 cut(s) | 2359 |
| PciI | ACATGT | 1 cut(s) | 1812 |
| PctI | GAATGC | 3 cut(s) | 950, 1899, 2160 |
| PdmI | GAANNNNTTC | 4 cut(s) | 642, 2033, 2139, 2892 |
| PfeI | GAWTC | 9 cut(s) | 6, 445, 683, 798, 1259, 2365, 2419, 2449, 2563 |
| PflFI | GACNNNGTC | 1 cut(s) | 1283 |
| PkrI | GCNGC | 9 cut(s) | 153, 235, 263, 359, 1091, 1137, 1303, 2489, 2765 |
| PleI | GAGTC | 2 cut(s) | 2017, 2073 |
| PpsI | GAGTC | 2 cut(s) | 2017, 2073 |
| Ppu21I | YACGTR | 1 cut(s) | 869 |
| PpuMI | RGGWCCY | 1 cut(s) | 2645 |
| PscI | ACATGT | 1 cut(s) | 1812 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1221 |
| PsiI | TTATAA | 1 cut(s) | 1956 |
| Psp5II | RGGWCCY | 1 cut(s) | 2645 |
| Psp6I | CCWGG | 1 cut(s) | 2689 |
| PspEI | GGTNACC | 1 cut(s) | 1196 |
| PspFI | CCCAGC | 1 cut(s) | 2568 |
| PspGI | CCWGG | 1 cut(s) | 2689 |
| PspN4I | GGNNCC | 3 cut(s) | 343, 1825, 2647 |
| PspPI | GGNCC | 7 cut(s) | 959, 1175, 1279, 1510, 2533, 2645, 2705 |
| PspPPI | RGGWCCY | 1 cut(s) | 2645 |
| PspXI | VCTCGAGB | 1 cut(s) | 2359 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2633 |
| PsyI | GACNNNGTC | 1 cut(s) | 1283 |
| PvuII | CAGCTG | 1 cut(s) | 236 |
| RsaI | GTAC | 4 cut(s) | 1783, 1793, 2637, 2856 |
| RsaNI | GTAC | 4 cut(s) | 1782, 1792, 2636, 2855 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1355, 1626, 1768, 1937, 2100, 2261 |
| SatI | GCNGC | 9 cut(s) | 152, 234, 262, 358, 1090, 1136, 1302, 2488, 2764 |
| Sau3AI | GATC | 5 cut(s) | 244, 1688, 1858, 2374, 2934 |
| Sau96I | GGNCC | 7 cut(s) | 959, 1175, 1279, 1510, 2533, 2645, 2705 |
| ScaI | AGTACT | 2 cut(s) | 1783, 1793 |
| SchI | GAGTC | 2 cut(s) | 2018, 2074 |
| ScrFI | CCNGG | 1 cut(s) | 2691 |
| SduI | GDGCHC | 2 cut(s) | 143, 2299 |
| SfaNI | GCATC | 5 cut(s) | 605, 1929, 1992, 2082, 2499 |
| Sfr274I | CTCGAG | 1 cut(s) | 2359 |
| SfuI | TTCGAA | 2 cut(s) | 47, 2319 |
| SinI | GGWCC | 5 cut(s) | 959, 1279, 1510, 2533, 2645 |
| SlaI | CTCGAG | 1 cut(s) | 2359 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1355, 1626, 1768, 1937, 2100, 2261 |
| SmlI | CTYRAG | 5 cut(s) | 914, 2006, 2359, 2395, 2897 |
| SmoI | CTYRAG | 5 cut(s) | 914, 2006, 2359, 2395, 2897 |
| SpeI | ACTAGT | 1 cut(s) | 629 |
| SsiI | CCGC | 4 cut(s) | 16, 1032, 1612, 2381 |
| SspI | AATATT | 1 cut(s) | 1402 |
| StyD4I | CCNGG | 1 cut(s) | 2689 |
| StyI | CCWWGG | 2 cut(s) | 1640, 2410 |
| TaaI | ACNGT | 3 cut(s) | 930, 1238, 1319 |
| TaiI | ACGT | 5 cut(s) | 857, 871, 1505, 2046, 2868 |
| TaqI | TCGA | 7 cut(s) | 47, 1287, 2319, 2346, 2360, 2664, 2679 |
| TatI | WGTACW | 2 cut(s) | 1781, 1791 |
| TfiI | GAWTC | 9 cut(s) | 6, 445, 683, 798, 1259, 2365, 2419, 2449, 2563 |
| TscAI | CASTG | 7 cut(s) | 26, 148, 864, 1858, 1992, 2031, 2044 |
| TseFI | GTSAC | 4 cut(s) | 855, 1005, 2039, 2323 |
| TseI | GCWGC | 9 cut(s) | 151, 233, 261, 357, 1089, 1135, 1301, 2487, 2763 |
| Tsp45I | GTSAC | 4 cut(s) | 855, 1005, 2039, 2323 |
| TspGWI | ACGGA | 1 cut(s) | 2893 |
| TspRI | CASTG | 7 cut(s) | 26, 148, 864, 1858, 1992, 2031, 2044 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1283 |
| VneI | GTGCAC | 1 cut(s) | 2295 |
| VpaK11BI | GGWCC | 5 cut(s) | 959, 1279, 1510, 2533, 2645 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 481 |
| XbaI | TCTAGA | 1 cut(s) | 101 |
| XceI | RCATGY | 1 cut(s) | 1816 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 812, 2263 |
| XhoI | CTCGAG | 1 cut(s) | 2359 |
| XmnI | GAANNNNTTC | 4 cut(s) | 642, 2033, 2139, 2892 |
| ZrmI | AGTACT | 2 cut(s) | 1783, 1793 |